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Gene KCMF1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
383 supporting clones for gene KCMF1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BQ230817 brain .a 1 to 883 1 to 889   tiling clone,   889/893
(99 %)
24 diff
(97.4 %id)
NM_020122.4   .a 16 to 7570 1 to 7555 exact RefSeq,   7555/7555
(100 %)
2 diff
(100.0 %id)
CT004343 T-Lymphocytes .a 16 to 777 1 to 762       762/763
(99 %)
1 diff
(99.9 %id)
BU844982 ovary, teratocarcinoma, cell line .a 32 to 873 1 to 848       848/925
(91 %)
7 diff
(99.3 %id)
BU553850 ovary, teratocarcinoma, cell line .a 32 to 736 1 to 713       713/977
(72 %)
12 diff
(98.8 %id)
BM148139 leukopheresis .a 68 to 563 1 to 496       496/497
(99 %)
4 diff
(99.2 %id)
CX865392 embryonic stem .a 79 to 894 1 to 816   tiling clone,   816/816
(100 %)
3 diff
(99.7 %id)
CR983625 T-Lymphocytes .a 81 to 664 1 to 582       582/590
(98 %)
9 diff
(98.5 %id)
CT001574 T-Lymphocytes .a 83 to 835 1 to 753       753/758
(99 %)
1 diff
(99.9 %id)
BM542617 leiomyosarcoma, uterus .a 95 to 681 1 to 589       589/1313
(44 %)
11 diff
(99.2 %id)
BU161453 melanotic melanoma, skin .a 95 to 620 1 to 535       532/1054
(50 %)
29 diff
(97.3 %id)
CR995314 T-Lymphocytes .a 104 to 378 1 to 276       276/329
(83 %)
3 diff
(99.1 %id)
BU187505 eye, retinoblastoma .a 156 to 967 1 to 825       825/891
(92 %)
28 diff
(96.9 %id)
BX344794 Neuroblastoma Cot 10-normalized .a 188 to 960 1 to 775       775/775
(100 %)
7 diff
(99.1 %id)
DN993710 brain, whole brain .a 189 to 771 9 to 591       583/591
(98 %)
6 diff
(99.0 %id)
AL519698 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 190 to 1041 1 to 851       851/851
(100 %)
8 diff
(99.1 %id)
BI549298 brain, hippocampus .a 192 to 789 6 to 625       617/798
(77 %)
37 diff
(95.4 %id)
TI_44167428   .a 192 to 789 86 to 705       617/878
(70 %)
37 diff
(95.8 %id)
TI_57150069   .a 196 to 928 55 to 786       732/786
(93 %)
6 diff
(99.3 %id)
BX395216 Neuroblastoma Cot 50-normalized .a 197 to 1138 1 to 935   fully sequenced,   935/935
(100 %)
16 diff
(98.3 %id)
BI763400 pooled colon, kidney, stomach .a 203 to 928 1 to 725       725/725
(100 %)
2 diff
(99.8 %id)
BC000178 Cervix, carcinoma .a 217 to 1866 1 to 1650 exact available from MGC, AAA   1650/1650
(100 %)
0 diff
(100 %id)
CD557761 testis .a 219 to 952 29 to 766       738/927
(79 %)
20 diff
(97.9 %id)
BE018000 cervical carcinoma cell line, cervix .a 220 to 749 1 to 530       530/530
(100 %)
0 diff
(100 %id)
CA489095   .a 237 to 1125 1 to 890       890/891
(99 %)
17 diff
(98.1 %id)
CR607426 T cells (Jurkat cell line) .a 239 to 1865 1 to 1627 exact     1627/1627
(100 %)
0 diff
(100 %id)
BX443488 T cells (Jurkat cell line) .a 239 to 1228 1 to 985       985/993
(99 %)
8 diff
(99.2 %id)
AK314761 testis .a 241 to 1505 1 to 1265 exact     1265/1265
(100 %)
0 diff
(100 %id)
DB087866 testis .a 242 to 784 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
TI_57146119   .a 245 to 954 63 to 773       711/773
(91 %)
12 diff
(98.5 %id)
BI758825 pooled colon, kidney, stomach .a 252 to 954 1 to 704       704/704
(100 %)
7 diff
(99.1 %id)
BU171579 melanotic melanoma, skin .a 253 to 1098 1 to 857       857/860
(99 %)
21 diff
(97.6 %id)
TI_57146909   .a 258 to 1128 27 to 897       871/897
(97 %)
15 diff
(98.4 %id)
BI760863 pooled colon, kidney, stomach .a 259 to 1128 1 to 870       870/870
(100 %)
9 diff
(99.0 %id)
CX167232 human embryonic stem cells differentiated toan early endodermal cell type .a 259 to 1189 1 to 931       931/931
(100 %)
0 diff
(100 %id)
BY797255 eye .a 276 to 908 1 to 633       633/633
(100 %)
0 diff
(100 %id)
BM563454 brain, medulla .a 278 to 1243 1 to 972       972/1031
(94 %)
17 diff
(98.4 %id)
AW369735 breast .a 290 to 626 339 to 2       338/339
(99 %)
3 diff
(99.2 %id)
AI598072 adenocarcinoma, Pancreas .a 298 to 598 142 to 448     Submitted on the opposite strand 307/448
(68 %)
8 diff
(98.3 %id)
AW369741 breast .a 299 to 627 348 to 10       350/357
(98 %)
56 diff
(84.4 %id)
AA313794 colon .a 307 to 898 1 to 595       595/596
(99 %)
5 diff
(99.2 %id)
AB083199 stomach .a 307 to 1866 1 to 1560 Q242R AAA   1560/1560
(100 %)
2 diff
(99.9 %id)
AF155652 adrenal gland .a 307 to 1866 1 to 1560 Q242R AAA   1560/1560
(100 %)
2 diff
(99.9 %id)
AK023403 ovary, tumor tissue .a 337 to 2421 1 to 2085 E95G tiling clone, available from FLJ,   2085/2085
(100 %)
1 diff
(100.0 %id)
AU134427 ovary, tumor tissue .a 338 to 1028 2 to 690   capped   689/689
(100 %)
4 diff
(99.5 %id)
CN308428 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 347 to 1105 1 to 759       759/759
(100 %)
6 diff
(99.3 %id)
CV023194 mixed .a 360 to 1009 1 to 650       650/650
(100 %)
3 diff
(99.6 %id)
CN308427 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 371 to 1048 1 to 678       678/678
(100 %)
7 diff
(99.0 %id)
AA092215   .a 374 to 670 10 to 299       290/299
(96 %)
16 diff
(94.7 %id)
BQ953181 epidermoid carcinoma, cell line, lung .a 374 to 1110 738 to 1     Submitted on the opposite strand 738/963
(76 %)
2 diff
(99.8 %id)
TI_1948124133   .a 374 to 1407 143 to 1170       1028/1267
(81 %)
46 diff
(96.4 %id)
TI_1948124134   .a 374 to 1245 142 to 1017       876/1614
(54 %)
34 diff
(97.9 %id)
TI_1948124135   .a 374 to 886 144 to 658       515/1347
(38 %)
34 diff
(97.5 %id)
TI_1948124198   .a 374 to 1356 142 to 1133       990/1297
(76 %)
32 diff
(97.6 %id)
TI_1948124199   .a 374 to 1332 142 to 1100       959/1386
(69 %)
33 diff
(97.7 %id)
TI_1948124200   .a 374 to 1074 140 to 841       702/1333
(52 %)
30 diff
(97.8 %id)
TI_1948124202   .a 374 to 1504 1247 to 129       1058/1368
(77 %)
32 diff
(97.7 %id)
TI_1948124656   .a 374 to 1413 143 to 1183       1041/1293
(80 %)
15 diff
(98.9 %id)
TI_1948124657   .a 374 to 1242 141 to 1002       862/1475
(58 %)
40 diff
(97.3 %id)
TI_1948124658   .a 374 to 1053 137 to 817       681/1397
(48 %)
23 diff
(98.4 %id)
TI_1948125192   .a 374 to 1498 142 to 1260       1119/1263
(88 %)
63 diff
(95.1 %id)
TI_1948125193   .a 374 to 1237 144 to 1017       874/1543
(56 %)
29 diff
(98.2 %id)
TI_1948125194   .a 374 to 1167 138 to 930       793/1441
(55 %)
35 diff
(97.6 %id)
TI_1948125721   .a 374 to 1249 144 to 1023       880/1307
(67 %)
28 diff
(97.9 %id)
TI_1948125723   .a 374 to 956 142 to 726       585/1449
(40 %)
18 diff
(98.8 %id)
BI834887 pooled pancreas and spleen .a 376 to 896 198 to 737       540/770
(70 %)
44 diff
(94.3 %id)
TI_57168029   .a 376 to 896 228 to 767       540/800
(67 %)
44 diff
(94.5 %id)
CR989233 T-Lymphocytes .a 377 to 1304 1 to 929       929/929
(100 %)
4 diff
(99.6 %id)
BG109888 Bone, osteosarcoma, cell line .a 378 to 1047 1 to 668       668/919
(72 %)
4 diff
(99.6 %id)
BI261192 cervical carcinoma cell line, cervix .a 378 to 989 49 to 659       611/659
(92 %)
7 diff
(99.0 %id)
EC518303 Prostate .a 390 to 496 1 to 108       108/109
(99 %)
2 diff
(98.2 %id)
EC547439 Prostate .a 390 to 496 1 to 106       106/107
(99 %)
2 diff
(98.2 %id)
BP381341 adipose tissue .a 394 to 1015 1 to 622       622/622
(100 %)
0 diff
(100 %id)
BP369377 testis .a 394 to 965 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
CN308432 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 421 to 995 1 to 577       577/577
(100 %)
4 diff
(99.4 %id)
TI_1948124203   .a 426 to 1504 1197 to 129       1069/1371
(77 %)
37 diff
(97.4 %id)
BQ433544 epithelioid carcinoma, Pancreas .a 450 to 1245 1 to 798       798/832
(95 %)
10 diff
(98.8 %id)
AW363489 colon .a 456 to 1025 571 to 2       570/581
(98 %)
4 diff
(99.4 %id)
AW363490 colon .a 456 to 1034 581 to 3       579/581
(99 %)
3 diff
(99.5 %id)
CB128521 cervix, Uterine .a 476 to 1041 1 to 566       566/566
(100 %)
0 diff
(100 %id)
CD579981 brain .a 477 to 1110 12 to 642       631/743
(84 %)
31 diff
(95.9 %id)
AA378782 synovial membrane .a 480 to 815 1 to 336       336/336
(100 %)
0 diff
(100 %id)
AW956451   .a 481 to 1057 1 to 578       578/593
(97 %)
32 diff
(94.7 %id)
AW363495 colon .a 500 to 1038 538 to 1       538/538
(100 %)
10 diff
(98.2 %id)
CN308430 embryonic stem cells, DMSO-treated H9 cellline .a 501 to 1100 1 to 600       600/600
(100 %)
5 diff
(99.2 %id)
AW362923 colon .a 510 to 999 9 to 495       487/495
(98 %)
10 diff
(98.0 %id)
CA396812 eye, RPE/choroid .a 521 to 1126 1 to 606       606/606
(100 %)
0 diff
(100 %id)
TI_1948124138   .a 534 to 1504 1100 to 128       973/1443
(67 %)
22 diff
(98.5 %id)
TI_1948124136   .a 537 to 1504 1106 to 129       978/1363
(71 %)
51 diff
(96.3 %id)
TI_1948124661   .a 537 to 1504 1096 to 127       970/1469
(66 %)
30 diff
(98.0 %id)
TI_1948125195   .a 539 to 1504 1095 to 128       968/1344
(72 %)
22 diff
(98.4 %id)
TI_1948125196   .a 539 to 1504 1099 to 129       971/1377
(70 %)
16 diff
(98.9 %id)
TI_1948125725   .a 539 to 1504 1103 to 129       975/1401
(69 %)
27 diff
(98.1 %id)
T73636 Liver .a 540 to 893 1 to 363       363/375
(96 %)
17 diff
(95.5 %id)
BM695331 eye, optic nerve .a 541 to 1224 1 to 686       686/686
(100 %)
2 diff
(99.8 %id)
BM907016 brain, hippocampus .a 543 to 1389 20 to 872       853/1091
(78 %)
17 diff
(98.5 %id)
R83511 breast .a 544 to 902 1 to 368       368/370
(99 %)
12 diff
(96.8 %id)
TI_1948124137   .a 545 to 1504 1088 to 129       960/1387
(69 %)
17 diff
(98.8 %id)
TI_1948124660   .a 545 to 1504 1087 to 130       958/1353
(70 %)
13 diff
(99.1 %id)
TI_1948125197   .a 549 to 1504 1077 to 127       951/1392
(68 %)
21 diff
(98.5 %id)
CX865539 embryonic stem .a 562 to 1363 1 to 803       803/803
(100 %)
2 diff
(99.8 %id)
BG676732 skin, squamous cell carcinoma .a 569 to 1104 1 to 535       537/535
(100 %)
5 diff
(99.1 %id)
BF353597 head_neck .a 571 to 915 8 to 351       344/351
(98 %)
7 diff
(98.1 %id)
DA022005   .a 572 to 1130 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
BE184736 head_neck .a 578 to 906 1 to 331       331/331
(100 %)
17 diff
(94.9 %id)
T60351 Liver .a 628 to 1084 1 to 469       469/469
(100 %)
15 diff
(96.9 %id)
BF355430 head_neck .a 654 to 1090 437 to 1       437/437
(100 %)
11 diff
(97.5 %id)
BF355435 head_neck .a 657 to 1090 434 to 1       434/434
(100 %)
5 diff
(98.9 %id)
AL122115 testis .a 663 to 1866 1 to 1204   available from DKFZ, AAA   1204/1204
(100 %)
0 diff
(100 %id)
BX116617 melanocyte .a 673 to 892 1 to 220       220/220
(100 %)
0 diff
(100 %id)
N45075 melanocyte .a 673 to 1117 1 to 449       449/449
(100 %)
6 diff
(98.7 %id)
TI_1948124201   .a 676 to 1504 956 to 128       829/1409
(58 %)
16 diff
(98.9 %id)
TI_1948125726   .a 685 to 1504 946 to 126       821/1392
(58 %)
7 diff
(99.5 %id)
BI094281 cervix .a 704 to 1395 1 to 705       705/921
(76 %)
20 diff
(97.9 %id)
TI_1948124659   .a 734 to 1512 899 to 116       784/1384
(56 %)
29 diff
(98.0 %id)
BE904985 epithelioid carcinoma, Pancreas .a 735 to 1492 1 to 755       755/790
(95 %)
14 diff
(98.3 %id)
BM705865 eye, lens .a 764 to 1285 1 to 522       522/522
(100 %)
0 diff
(100 %id)
TI_1948125724   .a 782 to 1504 859 to 129       731/1422
(51 %)
19 diff
(98.7 %id)
BQ432319 leiomyosarcoma, uterus .a 789 to 1532 1 to 751       751/912
(82 %)
38 diff
(95.9 %id)
W35125 heart .a 809 to 1003 1 to 195       195/195
(100 %)
0 diff
(100 %id)
TI_45235976   .a 819 to 1274 61 to 515   fully sequenced,   455/515
(88 %)
6 diff
(98.9 %id)
BI517578 pooled colon, kidney, stomach .a 821 to 1274 1 to 453   fully sequenced,   453/453
(100 %)
1 diff
(99.8 %id)
BU928967 brain, glioblastoma .a 836 to 1449 1 to 615       615/617
(99 %)
2 diff
(99.7 %id)
CB958148 Pooled-Glandular .a 836 to 1501 1 to 671       671/775
(86 %)
10 diff
(98.8 %id)
BE090741 breast .a 837 to 1230 1 to 394       394/412
(95 %)
10 diff
(97.6 %id)
BF185789 brain, glioblastoma .a 838 to 1470 1 to 628       628/872
(72 %)
12 diff
(98.7 %id)
BG533100 embryonal carcinoma, testis .a 838 to 1563 1 to 726       726/735
(98 %)
11 diff
(98.6 %id)
BG618288 Liver .a 838 to 1527 1 to 690       690/691
(99 %)
4 diff
(99.5 %id)
BG614797 embryonal carcinoma, testis .a 838 to 1647 1 to 800       800/896
(89 %)
35 diff
(96.1 %id)
BF734317 amnion_normal .a 850 to 1171 13 to 334       322/334
(96 %)
6 diff
(98.3 %id)
BE925646 amnion_normal .a 857 to 1109 289 to 35       255/345
(73 %)
0 diff
(100 %id)
BI868238 adenocarcinoma, cell line, Liver .a 900 to 1663 1 to 764       764/764
(100 %)
4 diff
(99.5 %id)
TI_57227893   .a 900 to 1663 52 to 815       764/764
(100 %)
4 diff
(99.5 %id)
CN308431 embryonic stem cells, DMSO-treated H9 cellline .a 902 to 1250 1 to 349       349/349
(100 %)
0 diff
(100 %id)
BM476532 lymph, lymphoma, cell line .a 904 to 1867 1 to 972   AAA   972/972
(100 %)
21 diff
(97.9 %id)
AW803556 uterus .a 912 to 1187 245 to 520       276/520
(53 %)
12 diff
(97.7 %id)
BF677097 Prostate .a 919 to 1592 1 to 678       678/842
(80 %)
33 diff
(96.1 %id)
BF090915 ovary .a 939 to 1078 140 to 1       140/140
(100 %)
0 diff
(100 %id)
BG116328 duodenal adenocarcinoma, cell line, small intestine .a 947 to 1578 1 to 630       630/712
(88 %)
10 diff
(98.6 %id)
EL952711 eyeball .a 959 to 1416 1 to 458       458/458
(100 %)
3 diff
(99.4 %id)
TI_149300853   .a 959 to 1860 970 to 77   AAA   894/974
(91 %)
19 diff
(98.1 %id)
AW579256 denis_drash .a 960 to 1281 322 to 1       322/333
(96 %)
13 diff
(96.1 %id)
AL561809 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 963 to 1822 869 to 9       861/869
(99 %)
9 diff
(99.0 %id)
BG288334 bladder, transitional cell papilloma, cell line .a 966 to 1766 1 to 788       788/971
(81 %)
20 diff
(98.0 %id)
FN159683 breast carcinoma .a 976 to 1068 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
CR617449 neuroblastoma .a 977 to 1868 1 to 892       892/892
(100 %)
0 diff
(100 %id)
AL518114 brain, neuroblastoma, neuroblastoma cells .a 977 to 1863 1 to 887   fully sequenced,   887/887
(100 %)
9 diff
(99.0 %id)
R08509 liver and spleen .a 981 to 1245 1 to 265       265/407
(65 %)
4 diff
(99.1 %id)
AA131134   .a 988 to 1567 1 to 577       577/579
(99 %)
4 diff
(99.4 %id)
BF916200 uterus_tumor .a 1006 to 1121 118 to 4     Submitted on the opposite strand 115/118
(97 %)
0 diff
(100 %id)
DW420836 Liver .a 1015 to 1302 12 to 299       288/299
(96 %)
6 diff
(98.0 %id)
TI_149299739   .a 1025 to 1866 916 to 83   AAA   834/987
(84 %)
15 diff
(98.5 %id)
BE937664 testis_normal .a 1035 to 1298 1 to 265       265/267
(99 %)
3 diff
(98.9 %id)
AW969622   .a 1041 to 1490 532 to 83   AAA Submitted on the opposite strand 450/672
(66 %)
0 diff
(100 %id)
AA470913 alveolar rhabdomyosarcoma .a 1041 to 1378 8 to 344       337/344
(97 %)
6 diff
(98.3 %id)
BE002921 breast_normal .a 1042 to 1388 351 to 5     Submitted on the opposite strand 347/351
(98 %)
1 diff
(99.8 %id)
TI_151702119   .a 1043 to 1868 920 to 100       821/1053
(77 %)
17 diff
(98.4 %id)
CD677198 eye, Trabecular meshwork .a 1045 to 1694 1 to 650       650/650
(100 %)
0 diff
(100 %id)
BE877622 large cell carcinoma, undifferentiated, lung .a 1063 to 1760 1 to 697       697/697
(100 %)
4 diff
(99.5 %id)
BX414160 T cells (Jurkat cell line) .a 1066 to 1860 803 to 5       799/879
(90 %)
34 diff
(96.2 %id)
AA776208 schizophrenic brain S-11 frontal lobe .a 1066 to 1428 1 to 362     Submitted on the opposite strand 362/362
(100 %)
2 diff
(99.5 %id)
BM824650 Ascites, stomach .a 1071 to 1495 1 to 425       425/425
(100 %)
1 diff
(99.8 %id)
BE937672 testis_normal .a 1091 to 1300 211 to 1       211/211
(100 %)
3 diff
(98.6 %id)
TI_149303131   .a 1094 to 1866 873 to 86   AAA   786/987
(79 %)
44 diff
(95.6 %id)
BM976843 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1107 to 1860 772 to 19   AAA   754/754
(100 %)
0 diff
(100 %id)
BX351265 Neuroblastoma Cot 50-normalized .a 1108 to 1855 746 to 1   fully sequenced,   746/746
(100 %)
20 diff
(97.4 %id)
AA436378 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1110 to 1548 1 to 438     Submitted on the opposite strand 438/438
(100 %)
2 diff
(99.6 %id)
BM976032 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1110 to 1866 770 to 19   AAA   752/752
(100 %)
5 diff
(99.4 %id)
CA424434 cell lines, Chondrosarcoma .a 1110 to 1866 775 to 19   AAA   757/757
(100 %)
0 diff
(100 %id)
BQ774080 Bone, Human Chondrosarcoma Cell Line .a 1110 to 1866 774 to 19   AAA   757/756
(100 %)
2 diff
(99.8 %id)
BU633231 cell lines, Chondrosarcoma .a 1111 to 1861 769 to 19   AAA   751/751
(100 %)
3 diff
(99.7 %id)
BI048917 uterus .a 1115 to 1404 19 to 307       289/312
(92 %)
8 diff
(97.5 %id)
AA700902 liver and spleen .a 1133 to 1632 500 to 1       500/500
(100 %)
1 diff
(99.8 %id)
BQ017681 Chondrosarcoma, Left Pubic Bone .a 1155 to 1866 730 to 19   AAA   712/712
(100 %)
0 diff
(100 %id)
CA748538 Alveolar Macrophage, lung .a 1157 to 1866 729 to 19   AAA   711/711
(100 %)
2 diff
(99.8 %id)
BE974062 Prostate .a 1160 to 1845 1 to 675       675/730
(92 %)
25 diff
(96.6 %id)
AW862520 colon .a 1165 to 1423 31 to 288       258/288
(89 %)
7 diff
(97.6 %id)
BP309821 brain .a 1190 to 1771 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BM799069 Ascites, stomach .a 1191 to 1364 1 to 174       174/174
(100 %)
2 diff
(98.9 %id)
BE536302 cervix .a 1197 to 1560 1 to 374       374/375
(99 %)
17 diff
(95.5 %id)
BQ019168 lung, Metastatic Chondrosarcoma .a 1197 to 1866 688 to 19   AAA   668/670
(99 %)
3 diff
(99.6 %id)
CD521374 pooled .a 1202 to 1858 1 to 658       658/668
(98 %)
7 diff
(99.0 %id)
BM824773 Ascites, stomach .a 1202 to 1678 1 to 477       477/477
(100 %)
0 diff
(100 %id)
CA438234 lung, Metastatic Chondrosarcoma .a 1206 to 1866 679 to 19   AAA   661/661
(100 %)
1 diff
(99.9 %id)
BF858550 prostate_tumor .a 1207 to 1441 248 to 13     Submitted on the opposite strand 236/252
(93 %)
6 diff
(97.7 %id)
CR619076 Placenta Cot 25-normalized .a 1211 to 2973 1 to 1763   tiling clone,   1763/1763
(100 %)
0 diff
(100 %id)
AL544647 placenta, Placenta Cot 25-normalized .a 1211 to 2069 1 to 859       859/865
(99 %)
4 diff
(99.6 %id)
AW999845 breast_normal .a 1212 to 1419 211 to 3     Submitted on the opposite strand 209/211
(99 %)
0 diff
(100 %id)
AL518113 brain, neuroblastoma, neuroblastoma cells .a 1213 to 1820 608 to 1   fully sequenced,   608/608
(100 %)
17 diff
(97.3 %id)
BI518119 pooled colon, kidney, stomach .a 1213 to 1815 626 to 4   fully sequenced,   623/626
(99 %)
2 diff
(99.7 %id)
TI_45235977   .a 1213 to 1815 638 to 4   fully sequenced,   633/636
(99 %)
5 diff
(99.3 %id)
AA676549 liver and spleen .a 1220 to 1632 413 to 1       413/414
(99 %)
0 diff
(100 %id)
BM759090 lymph node, stomach .a 1226 to 1781 1 to 556       556/556
(100 %)
0 diff
(100 %id)
AA705607   .a 1236 to 1570 343 to 9       335/345
(97 %)
0 diff
(100 %id)
BF055153 pooled .a 1236 to 1868 638 to 7       632/659
(95 %)
0 diff
(100 %id)
DA032863   .a 1237 to 1802 2 to 568   capped   567/567
(100 %)
4 diff
(99.3 %id)
BF732345 fibrotheoma, ovary .a 1239 to 1500 264 to 1       264/268
(98 %)
22 diff
(91.8 %id)
AA187060   .a 1241 to 1578 1 to 345   fully sequenced,   345/345
(100 %)
9 diff
(97.4 %id)
BU629348 cell lines, Chondrosarcoma .a 1247 to 1866 638 to 19   AAA   620/620
(100 %)
1 diff
(99.9 %id)
BP265304 thyroid .a 1256 to 1837 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
AW821751 stomach .a 1284 to 1507 18 to 239       222/239
(92 %)
6 diff
(97.5 %id)
BF906774 stomach .a 1286 to 1506 232 to 11     Submitted on the opposite strand 222/232
(95 %)
0 diff
(100 %id)
BX507173 Liver .a 1286 to 1935 1 to 650       650/650
(100 %)
1 diff
(99.9 %id)
FN098778 breast carcinoma .a 1289 to 1345 58 to 1     Submitted on the opposite strand 58/59
(98 %)
1 diff
(98.4 %id)
BU958624 mixed (pool of 40 RNAs) .a 1289 to 1868 1 to 582       582/806
(72 %)
28 diff
(96.6 %id)
BG499742 adenocarcinoma, Prostate .a 1290 to 1866 1 to 580       580/606
(95 %)
4 diff
(99.4 %id)
BQ222442 epithelioid carcinoma, Pancreas .a 1301 to 1834 1 to 543       543/1000
(54 %)
22 diff
(97.8 %id)
BE858220 brain, glioblastoma (pooled) .a 1304 to 1866 563 to 1       563/563
(100 %)
0 diff
(100 %id)
AI419123 brain, glioblastoma (pooled) .a 1311 to 1632 326 to 1       326/326
(100 %)
3 diff
(99.1 %id)
BE775138 uterus .a 1314 to 1785 483 to 12       472/483
(97 %)
0 diff
(100 %id)
BE775264 uterus .a 1314 to 1785 483 to 12       472/483
(97 %)
0 diff
(100 %id)
AA778328 heart .a 1318 to 1866 549 to 1       549/549
(100 %)
0 diff
(100 %id)
BX442086 brain, fetal brain .a 1319 to 1834 516 to 1       516/520
(99 %)
7 diff
(98.7 %id)
R68400 placenta .a 1319 to 1755 1 to 454       454/458
(99 %)
23 diff
(95.0 %id)
AW132082 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1319 to 1636 323 to 5       319/323
(98 %)
0 diff
(100 %id)
AI741220 pooled .a 1331 to 1861 531 to 1       531/531
(100 %)
0 diff
(100 %id)
CB143942 Liver .a 1334 to 1690 1 to 357       357/357
(100 %)
0 diff
(100 %id)
CA393873 eye, RPE/choroid .a 1336 to 1860 11 to 533       523/536
(97 %)
8 diff
(98.6 %id)
CN478588 Human Lung Epithelial cells, lung .a 1386 to 1657 83 to 354   AAA Submitted on the opposite strand 272/356
(76 %)
6 diff
(98.4 %id)
AI863031 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1387 to 1861 492 to 18   AAA   475/475
(100 %)
2 diff
(99.6 %id)
AI749475 aorta .a 1389 to 1866 479 to 1       479/479
(100 %)
11 diff
(97.8 %id)
BM667841 eye, lens .a 1394 to 1860 485 to 19   AAA   467/467
(100 %)
0 diff
(100 %id)
AI310467 2 pooled tumors (clear cell type), Kidney .a 1397 to 1868 475 to 4       472/475
(99 %)
0 diff
(100 %id)
AA533861 normal prostatic epithelial cells, Prostate .a 1403 to 1868 473 to 18   AAA   456/533
(85 %)
21 diff
(96.1 %id)
BM981196 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1404 to 1866 481 to 19   AAA   463/463
(100 %)
0 diff
(100 %id)
AV702523 adrenal gland .a 1405 to 1874 1 to 470       470/645
(72 %)
9 diff
(98.7 %id)
AW043666 pooled .a 1408 to 1861 454 to 1       454/454
(100 %)
0 diff
(100 %id)
DB509913 testis .a 1421 to 1861 1 to 443     Submitted on the opposite strand 443/443
(100 %)
7 diff
(98.5 %id)
AW472851 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1429 to 1866 439 to 1       439/439
(100 %)
3 diff
(99.4 %id)
DA162908 amygdala .a 1431 to 2014 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
AI492642 B-cell, chronic lymphotic leukemia .a 1452 to 1866 428 to 14   AAA   415/415
(100 %)
1 diff
(99.8 %id)
AI379078 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1452 to 1862 412 to 2       411/412
(99 %)
0 diff
(100 %id)
AI985776 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1452 to 1868 417 to 1       417/417
(100 %)
0 diff
(100 %id)
N35060 melanocyte .a 1456 to 1861 420 to 14   AAA   407/407
(100 %)
1 diff
(99.8 %id)
AA775829 whole brain .a 1466 to 1860 417 to 23   AAA   395/395
(100 %)
0 diff
(100 %id)
AI142663 pooled .a 1468 to 1862 397 to 3       395/397
(99 %)
0 diff
(100 %id)
AK311099 cerebellum .a 1475 to 2481 1 to 1007       1007/1007
(100 %)
1 diff
(100.0 %id)
DC304756 cerebellum .a 1475 to 2050 1 to 576       576/576
(100 %)
0 diff
(100 %id)
AA255803 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1476 to 1866 1 to 391   fully sequenced, AAA   391/391
(100 %)
0 diff
(100 %id)
AA514591 colon .a 1476 to 1868 397 to 5       393/397
(98 %)
0 diff
(100 %id)
AW873379 normal epithelium, thyroid .a 1476 to 1757 40 to 321     Submitted on the opposite strand 282/321
(87 %)
6 diff
(98.2 %id)
AA714648 germinal center B cell .a 1477 to 1866 403 to 14   AAA   390/390
(100 %)
0 diff
(100 %id)
AA825824 germinal center B cell .a 1477 to 1866 415 to 26   AAA   390/390
(100 %)
0 diff
(100 %id)
AA481311 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1478 to 1867 390 to 1     Submitted on the opposite strand 390/390
(100 %)
0 diff
(100 %id)
AA815164 germinal center B cell .a 1484 to 1866 419 to 37   AAA   383/383
(100 %)
0 diff
(100 %id)
AW938435 denis_drash .a 1487 to 1701 1 to 220       220/228
(96 %)
11 diff
(95.2 %id)
AA376721 salivary gland .a 1488 to 1866 381 to 1       381/381
(100 %)
7 diff
(98.2 %id)
AA872915 2 pooled tumors (clear cell type), Kidney .a 1509 to 1868 362 to 3       360/362
(99 %)
0 diff
(100 %id)
AA761394 germinal center B cell .a 1542 to 1866 361 to 37   AAA   325/325
(100 %)
0 diff
(100 %id)
BQ377815 uterus .a 1548 to 1862 1 to 315       315/316
(99 %)
8 diff
(97.5 %id)
AA181257   .a 1548 to 1857 324 to 11   fully sequenced,   314/324
(96 %)
1 diff
(99.7 %id)
AA630722   .a 1552 to 1827 276 to 1       276/276
(100 %)
0 diff
(100 %id)
AI220807 placenta .a 1570 to 1868 300 to 2       299/300
(99 %)
0 diff
(100 %id)
AI381850 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1576 to 1851 276 to 1       276/276
(100 %)
0 diff
(100 %id)
AA665152 alveolar rhabdomyosarcoma .a 1588 to 1852 292 to 28       265/292
(90 %)
0 diff
(100 %id)
BQ367391 placenta_normal .a 1590 to 2044 16 to 471       456/471
(96 %)
6 diff
(98.8 %id)
AI033611 parathyroid gland, parathyroid tumor .a 1592 to 1866 288 to 14   AAA   275/275
(100 %)
3 diff
(99.0 %id)
T73598 Liver .a 1595 to 1856 274 to 12       263/274
(95 %)
0 diff
(100 %id)
AI494532 anaplastic oligodendroglioma, brain .a 1595 to 1860 281 to 16   AAA   266/266
(100 %)
3 diff
(98.9 %id)
FN160426 breast carcinoma .a 1615 to 1722 107 to 2     Submitted on the opposite strand 106/107
(99 %)
0 diff
(100 %id)
R40958 whole brain .a 1616 to 1868 255 to 3       253/255
(99 %)
0 diff
(100 %id)
AI419122 brain, glioblastoma (pooled) .a 1634 to 1866 233 to 1       233/242
(96 %)
0 diff
(100 %id)
AA806710 germinal center B cell .a 1645 to 1866 258 to 37   AAA   222/222
(100 %)
0 diff
(100 %id)
AA508201 Prostate .a 1663 to 1860 223 to 28   AAA   196/196
(100 %)
1 diff
(99.5 %id)
N74069 liver and spleen .a 1671 to 1866 196 to 1       196/196
(100 %)
0 diff
(100 %id)
FN164869 breast carcinoma .a 1682 to 1778 1 to 98       98/99
(98 %)
2 diff
(98.0 %id)
W20372 heart .a 1692 to 1860 169 to 1       169/172
(98 %)
0 diff
(100 %id)
AA256696 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1701 to 1866 166 to 1   fully sequenced,   166/166
(100 %)
0 diff
(100 %id)
AA369285 placenta .a 1718 to 1866 149 to 1       149/149
(100 %)
0 diff
(100 %id)
D25783   .a 1722 to 1868 1 to 147     Submitted on the opposite strand 147/148
(99 %)
1 diff
(99.4 %id)
EC526998 Prostate .a 1735 to 1819 83 to 1       83/92
(90 %)
3 diff
(96.8 %id)
GD158951   .a 1745 to 1866 1 to 121   AAA   121/121
(100 %)
4 diff
(96.7 %id)
AF131740   .a 1761 to 3334 1 to 1574   AAA   1574/1574
(100 %)
1 diff
(100.0 %id)
FN052359 breast carcinoma .a 1783 to 1868 1 to 86       86/89
(96 %)
5 diff
(94.4 %id)
T79907 whole brain .a 1787 to 2245 1 to 475       475/475
(100 %)
21 diff
(95.6 %id)
AU155411 ovary, tumor tissue .a 1877 to 2421 539 to 1       539/543
(99 %)
11 diff
(98.0 %id)
BI868561 adenocarcinoma, cell line, Liver .a 1893 to 2641 1 to 749       749/750
(99 %)
23 diff
(97.0 %id)
TI_57228313   .a 1893 to 2641 55 to 803       749/750
(99 %)
23 diff
(97.0 %id)
BF126177 Liver .a 1899 to 2651 1 to 753       753/754
(99 %)
33 diff
(95.7 %id)
AA593652 breast .a 1942 to 2383 454 to 14   AAA   441/441
(100 %)
1 diff
(99.8 %id)
CB141415 Liver .a 1958 to 2669 1 to 711       711/711
(100 %)
2 diff
(99.8 %id)
AI147247 uterus .a 1978 to 2421 444 to 1       444/444
(100 %)
1 diff
(99.8 %id)
EB362242 eye, lens .a 1992 to 2603 613 to 2       612/614
(99 %)
0 diff
(100 %id)
BX371621 Placenta Cot 25-normalized .a 2057 to 2973 918 to 1       918/918
(100 %)
10 diff
(99.0 %id)
AA765685 germinal center B cell .a 2163 to 2605 452 to 12   AAA   441/441
(100 %)
2 diff
(99.6 %id)
AA809471 germinal center B cell .a 2196 to 2605 420 to 11   AAA   410/410
(100 %)
0 diff
(100 %id)
AA831279 germinal center B cell .a 2212 to 2605 405 to 12   AAA   394/394
(100 %)
0 diff
(100 %id)
AI823518 Kidney .a 2256 to 2617 363 to 2       362/363
(99 %)
0 diff
(100 %id)
W38637 lung .a 2344 to 2802 14 to 475       462/475
(97 %)
6 diff
(98.8 %id)
AW969355   .a 2382 to 2857 476 to 1     Submitted on the opposite strand 476/616
(77 %)
0 diff
(100 %id)
AW969364   .a 2382 to 2826 476 to 32     Submitted on the opposite strand 445/613
(72 %)
0 diff
(100 %id)
AA626494 lung, lung carcinoma .a 2403 to 2579 1 to 177       177/177
(100 %)
0 diff
(100 %id)
AW954098   .a 2525 to 3129 1 to 606       606/606
(100 %)
14 diff
(97.7 %id)
AA384535 thyroid gland .a 2528 to 2900 5 to 377       373/377
(98 %)
6 diff
(98.5 %id)
CA867428 Pancreas, Purified pancreatic islet .a 2556 to 3143 11 to 598       588/598
(98 %)
6 diff
(99.0 %id)
BM700474 eye, lens .a 2645 to 3170 1 to 526       526/526
(100 %)
0 diff
(100 %id)
BQ427974 melanotic melanoma, skin .a 2671 to 3455 11 to 806       796/936
(85 %)
17 diff
(98.2 %id)
BQ006748 Chondrosarcoma, Left Pelvis .a 2677 to 3340 682 to 19   AAA   664/664
(100 %)
1 diff
(99.9 %id)
BF240436 bone marrow, from chronic myelogenous leukemia .a 2700 to 3273 1 to 572       572/797
(71 %)
23 diff
(97.2 %id)
AA309263 Liver .a 2704 to 3029 1 to 326       326/331
(98 %)
1 diff
(99.7 %id)
AA125748 uterus .a 2711 to 3088 1 to 390   fully sequenced,   390/390
(100 %)
15 diff
(96.2 %id)
AI808537 pooled .a 2717 to 3218 7 to 508     Submitted on the opposite strand 502/508
(98 %)
6 diff
(98.9 %id)
AA057852 uterus .a 2718 to 2950 1 to 233   fully sequenced,   233/233
(100 %)
3 diff
(98.8 %id)
AL570811 placenta, Placenta Cot 25-normalized .a 2780 to 3310 530 to 1       530/530
(100 %)
3 diff
(99.5 %id)
BG389307 embryonal carcinoma, cell line, testis .a 2791 to 3340 618 to 43   AAA Submitted on the opposite strand 576/801
(71 %)
0 diff
(100 %id)
CN402369 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2802 to 3533 8 to 739   tiling clone,   732/739
(99 %)
6 diff
(99.2 %id)
AV730113 hypothalamus .a 2809 to 3227 1 to 410       410/417
(98 %)
7 diff
(98.4 %id)
AI743396 pooled .a 2819 to 3340 530 to 9       522/530
(98 %)
0 diff
(100 %id)
CN402370 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2853 to 3348 543 to 48     Submitted on the opposite strand 496/543
(91 %)
0 diff
(100 %id)
BU753259 placenta .a 2864 to 3340 494 to 18   AAA   477/477
(100 %)
1 diff
(99.8 %id)
AW972116   .a 2896 to 3339 444 to 1     Submitted on the opposite strand 444/470
(94 %)
10 diff
(97.9 %id)
AW340451 pooled .a 2896 to 3340 446 to 2       445/446
(99 %)
0 diff
(100 %id)
BF056085 pooled .a 2905 to 3340 444 to 9       436/444
(98 %)
0 diff
(100 %id)
BQ023349 placenta .a 2905 to 3340 454 to 19   AAA   436/446
(97 %)
5 diff
(98.9 %id)
DB513287 testis .a 2910 to 3340 1 to 431     Submitted on the opposite strand 431/439
(98 %)
6 diff
(98.7 %id)
AA494440 colon .a 2910 to 3340 432 to 1       432/432
(100 %)
2 diff
(99.6 %id)
AA035358 uterus .a 2919 to 3340 440 to 10       431/440
(97 %)
0 diff
(100 %id)
AA057112 uterus .a 2933 to 3340 411 to 1   fully sequenced,   411/411
(100 %)
4 diff
(99.1 %id)
AA595451 Prostate, prostate tumor .a 2950 to 3341 391 to 1       391/391
(100 %)
1 diff
(99.8 %id)
AA033763 uterus .a 2956 to 3339 1 to 385       385/385
(100 %)
1 diff
(99.8 %id)
AV724521 hypothalamus .a 2959 to 3340 1 to 382       382/382
(100 %)
0 diff
(100 %id)
AV724605 hypothalamus .a 2959 to 3340 1 to 382       382/382
(100 %)
1 diff
(99.8 %id)
BE245250 leukopheresis .a 2960 to 3340 380 to 1       380/380
(100 %)
5 diff
(98.7 %id)
AI123772 pooled .a 2969 to 3340 380 to 9       372/380
(97 %)
0 diff
(100 %id)
BF435877 pooled .a 2995 to 3339 352 to 8       345/352
(98 %)
0 diff
(100 %id)
BQ022289 placenta .a 3003 to 3340 355 to 18   AAA   338/338
(100 %)
2 diff
(99.5 %id)
AW972106   .a 3012 to 3340 377 to 49   AAA Submitted on the opposite strand 329/330
(99 %)
8 diff
(97.6 %id)
BI003414 head_normal .a 3018 to 3522 518 to 15       504/518
(97 %)
0 diff
(100 %id)
AI475098 anaplastic oligodendroglioma, brain .a 3024 to 3340 317 to 1       317/317
(100 %)
2 diff
(99.4 %id)
AW082173 pooled .a 3035 to 3332 298 to 1       298/298
(100 %)
4 diff
(98.7 %id)
R37616 whole brain .a 3050 to 3335 295 to 9       287/295
(97 %)
0 diff
(100 %id)
AA125869 uterus .a 3058 to 3337 293 to 13   fully sequenced,   281/293
(95 %)
5 diff
(98.3 %id)
AI918393 adenocarcinoma, Pancreas .a 3067 to 3340 275 to 2       274/275
(99 %)
0 diff
(100 %id)
N90901 lung .a 3095 to 3341 270 to 24   AAA   247/247
(100 %)
0 diff
(100 %id)
BI004160 head_normal .a 3121 to 3522 417 to 18       400/417
(95 %)
0 diff
(100 %id)
CA943445 Pancreas, Purified pancreatic islet .a 3201 to 3799 604 to 6       599/604
(99 %)
0 diff
(100 %id)
AI221300 pooled .a 3353 to 3797 442 to 1       442/442
(100 %)
3 diff
(99.4 %id)
AI341578 pooled germ cell tumors .a 3386 to 3799 414 to 1       414/414
(100 %)
0 diff
(100 %id)
AA131214   .a 3394 to 3799 415 to 4       412/415
(99 %)
0 diff
(100 %id)
FN159731 breast carcinoma .a 3456 to 3569 113 to 1     Submitted on the opposite strand 113/113
(100 %)
1 diff
(99.2 %id)
DA933107 Spleen .a 3470 to 4041 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
BQ024012 placenta .a 3518 to 3878 375 to 15   AAA   361/361
(100 %)
0 diff
(100 %id)
TI_149300410   .a 3564 to 4461 966 to 82   AAA   885/949
(93 %)
20 diff
(97.9 %id)
BM976482 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 3688 to 4461 788 to 19   tiling clone, AAA   770/770
(100 %)
7 diff
(99.1 %id)
FN132049 breast carcinoma .a 3694 to 3792 1 to 96       96/99
(96 %)
5 diff
(95.0 %id)
CR742460 normal prostate, Prostate .a 3703 to 4240 1 to 538   tiling clone, AAA   538/538
(100 %)
0 diff
(100 %id)
DA504199 brain .a 4080 to 4642 2 to 562   tiling clone, capped   561/561
(100 %)
2 diff
(99.7 %id)
DA062180 cerebellum .a 5514 to 6085 2 to 574   tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
DB332639 Spleen .a 5928 to 6481 554 to 1   tiling clone,   554/554
(100 %)
0 diff
(100 %id)
DB316002 brain .a 5935 to 6481 547 to 1       547/547
(100 %)
0 diff
(100 %id)
DB297080 cerebellum .a 7021 to 7567 547 to 1   tiling clone,   547/547
(100 %)
3 diff
(99.5 %id)
BM781874 myeloma .b 1 to 625 1 to 625 exact tiling clone,   628/628
(100 %)
0 diff
(100 %id)
DB448117 testis .c 1 to 431 1 to 431 H93Q tiling clone,   431/431
(100 %)
1 diff
(99.8 %id)
AW850805 colon .d-u 1 to 679 1 to 679   tiling clone,   679/679
(100 %)
12 diff
(98.3 %id)
AW850893 colon .d-u 6 to 239 7 to 240   tiling clone,   234/240
(97 %)
6 diff
(97.5 %id)
AW850905 colon .d-u 6 to 477 7 to 478       472/481
(98 %)
10 diff
(98.0 %id)
AW851021 colon .d-u 6 to 493 7 to 494       488/494
(98 %)
5 diff
(99.0 %id)
AW851248 colon .d-u 6 to 522 7 to 523   tiling clone,   517/523
(98 %)
5 diff
(99.1 %id)
AW851425 colon .d-u 6 to 522 7 to 523       517/523
(98 %)
5 diff
(99.1 %id)
DA741196   .d-u 647 to 1074 2 to 429   tiling clone, to resequence, capped   428/428
(100 %)
3 diff
(99.3 %id)
AW016245   .d-u 777 to 1240 1 to 464     Submitted on the opposite strand 464/464
(100 %)
2 diff
(99.6 %id)
AA825554 germinal center B cell .d-u 784 to 1261 1 to 478   tiling clone, Submitted on the opposite strand 478/478
(100 %)
1 diff
(99.8 %id)
AA719526 pineal gland .d-u 793 to 1286 1 to 494     Submitted on the opposite strand 494/495
(99 %)
5 diff
(99.0 %id)
AA907758 pooled .d-u 794 to 1212 1 to 419     Submitted on the opposite strand 419/419
(100 %)
0 diff
(100 %id)
AW978934   .d-u 795 to 1349 1 to 551       551/551
(100 %)
7 diff
(98.8 %id)
L44308   .d-u 808 to 1213 1 to 407       407/407
(100 %)
4 diff
(99.1 %id)
AW752865 colon .d-u 918 to 1470 553 to 1   tiling clone,   553/553
(100 %)
6 diff
(99.0 %id)
BX473205   .d-u 987 to 1461 1 to 475   fully sequenced,   475/475
(100 %)
0 diff
(100 %id)
AW851283 colon .d-u 1066 to 1470 405 to 1       405/405
(100 %)
3 diff
(99.3 %id)
AW752867 colon .d-u 1110 to 1474 377 to 12       366/377
(97 %)
0 diff
(100 %id)
AW851385 colon .d-u 1113 to 1461 349 to 1       349/349
(100 %)
12 diff
(96.6 %id)
DA818674   .d-u 1426 to 1771 2 to 347   tiling clone, capped   346/346
(100 %)
0 diff
(100 %id)
BX473206   .d-u 1431 to 1728 298 to 1   fully sequenced,   298/298
(100 %)
1 diff
(99.7 %id)
DB327753   .d-u 2634 to 3209 576 to 1   tiling clone,   576/576
(100 %)
1 diff
(99.9 %id)
DB324711   .d-u 2684 to 3208 525 to 1   tiling clone, to resequence,   525/525
(100 %)
1 diff
(99.9 %id)
BI561142 testis .e 1 to 233 1 to 234   tiling clone,   234/308
(75 %)
4 diff
(98.8 %id)
TI_44348820   .e 6 to 233 90 to 318       229/392
(58 %)
3 diff
(99.3 %id)
BU182357 eye, retinoblastoma .e 56 to 715 19 to 679   tiling clone,   661/968
(68 %)
16 diff
(98.4 %id)
DR033877   .e 85 to 235 16 to 166       151/166
(90 %)
6 diff
(96.4 %id)
AA233085 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 624 to 1066 1 to 350   tiling clone, to resequence,   332/352
(94 %)
11 diff
(96.9 %id)
AA243698 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2062 to 2516 455 to 1   tiling clone, to resequence,   455/455
(100 %)
0 diff
(100 %id)
DA697668   .f-u 1 to 576 2 to 577   tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
D59879   .f-u 134 to 465 1 to 334       334/334
(100 %)
5 diff
(98.6 %id)
D80590 brain .f-u 135 to 386 1 to 252       252/252
(100 %)
2 diff
(99.3 %id)
D81658 brain .f-u 135 to 488 1 to 354       354/354
(100 %)
5 diff
(98.6 %id)
C15092   .f-u 318 to 783 464 to 1 A14L H15T A16P C17V N18I ... tiling clone,   464/464
(100 %)
3 diff
(99.4 %id)
EL948968 eyeball .f-u 978 to 1538 9 to 569   tiling clone,   561/569
(98 %)
5 diff
(99.2 %id)
BX114677 whole brain .f-u 1348 to 1869 534 to 15   tiling clone, AAA   520/520
(100 %)
2 diff
(99.7 %id)
AI140459 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 1370 to 1869 500 to 1       500/500
(100 %)
1 diff
(99.8 %id)
R53065.
matches multiple genes
whole brain .f-u 1432 to 1868 449 to 11     also hits gene sasmyby 439/451
(97 %)
0 diff
(100 %id)
AI168839 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 1453 to 1869 416 to 1   tiling clone,   416/416
(100 %)
1 diff
(99.8 %id)
AW466865 2 pooled tumors (clear cell type), Kidney .f-u 1476 to 1870 397 to 3       395/397
(99 %)
0 diff
(100 %id)
CR979576 T-Lymphocytes .g 1 to 1100 1 to 812 exact tiling clone, Suspected internal deletion 812/824
(98 %)
16 diff
(98.1 %id)
BU663602 blood .h-u 1 to 627 1 to 630 A12S tiling clone,   630/630
(100 %)
8 diff
(98.8 %id)
DB026177 testis .i 1 to 559 2 to 560 exact tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DB225823 trachea .j-u 1 to 557 2 to 558 T17A S19G tiling clone, capped   557/557
(100 %)
14 diff
(97.5 %id)
AW840161 leiomios Gene KCMF1, variant not shown         This clone was ignored    
BE000932 breast_normal Gene KCMF1, variant not shown         This clone was ignored    
CN308429 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene KCMF1, variant not shown         This clone was ignored    
BX641663   Gene KCMF1, variant not shown              
AA213566 germinal center B cell Gene KCMF1, variant not shown         Suspected internal deletion, this clone was ignored    
AA213731 germinal center B cell Gene KCMF1, variant not shown         Suspected internal deletion, this clone was ignored    
AI190946 heart Gene KCMF1, variant not shown         This clone was ignored    
BF111538 pooled Gene KCMF1, variant not shown         Suspected internal deletion, this clone was ignored    
BG254283 adenocarcinoma, cell line, Prostate Gene KCMF1, variant not shown         Suspected internal deletion, this clone was ignored    
BI462676 testis Gene KCMF1, variant not shown         This clone was ignored    
CD558329 White Matter Gene KCMF1, variant not shown              
DB107693 thymus Gene KCMF1, variant not shown       capped      
DB343081 thymus Gene KCMF1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f-u, .g, .h-u, .i, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC