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Gene KBTBD4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
311 supporting clones for gene KBTBD4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA512980 brain .a -8 to 470 2 to 482   tiling clone, capped   481/481
(100 %)
3 diff
(99.4 %id)
AL536835 brain, fetal brain .a 19 to 1118 1 to 1088   tiling clone,   1088/1088
(100 %)
24 diff
(97.8 %id)
DA533612 brain .a 35 to 606 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB206913 trachea .a 62 to 513 2 to 453   capped   452/452
(100 %)
0 diff
(100 %id)
DA520210 brain .a 65 to 632 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
CD691860 normal nasopharynx .a 67 to 653 39 to 624       586/624
(93 %)
6 diff
(99.1 %id)
DA525088 brain .a 87 to 606 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
DA741530   .a 89 to 653 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB461466.
matches multiple genes
testis .a 103 to 595 1 to 493     also hits gene PTPMT1andNDUFS3 493/493
(100 %)
0 diff
(100 %id)
DA712463   .a 113 to 672 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BM740464 stomach .a 1064 to 1671 1 to 607       607/607
(100 %)
2 diff
(99.7 %id)
BM758422 stomach .a 1064 to 1394 1 to 331       331/331
(100 %)
0 diff
(100 %id)
BM747647 stomach .a 1064 to 1562 1 to 499       499/499
(100 %)
5 diff
(99.0 %id)
BM758128 stomach .a 1064 to 1469 1 to 405       405/405
(100 %)
1 diff
(99.8 %id)
BM758688 stomach .a 1064 to 1609 1 to 546       546/546
(100 %)
0 diff
(100 %id)
BM783217 stomach .a 1064 to 1587 1 to 530       530/530
(100 %)
19 diff
(96.5 %id)
BM783251 stomach .a 1064 to 1754 1 to 691   tiling clone,   691/691
(100 %)
0 diff
(100 %id)
DA082964 cerebellum .a 1065 to 1615 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA090117 cerebellum .a 1065 to 1634 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BG120371 adenocarcinoma, cell line, Liver .a 1069 to 1818 1 to 748       748/749
(99 %)
15 diff
(98.0 %id)
TI_1948136713   .a 1081 to 1803 846 to 124       723/1092
(66 %)
0 diff
(100 %id)
TI_1948136008   .a 1084 to 1803 859 to 133       727/1166
(62 %)
0 diff
(100 %id)
R17856 whole brain .a 1094 to 1436 1 to 354       354/380
(93 %)
11 diff
(97.2 %id)
BG171504 hypernephroma, cell line, Kidney .a 1103 to 1791 1 to 689       689/991
(69 %)
12 diff
(98.8 %id)
TI_1948136364   .a 1105 to 1803 832 to 124       709/1225
(57 %)
0 diff
(100 %id)
BQ308484 breast .a 1109 to 1586 1 to 492       492/492
(100 %)
34 diff
(93.1 %id)
DN917540   .a 1112 to 1687 17 to 592       576/592
(97 %)
6 diff
(99.0 %id)
BU180576 melanotic melanoma, cell line, skin .a 1125 to 1792 37 to 705       669/979
(68 %)
6 diff
(99.4 %id)
CR616082 Neuroblastoma Cot 50-normalized .a 1245 to 2517 1 to 1273   tiling clone,   1273/1273
(100 %)
0 diff
(100 %id)
AL529828 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1246 to 1895 1 to 642   fully sequenced, AAA   642/642
(100 %)
6 diff
(99.1 %id)
BE906952 epithelioid carcinoma, Pancreas .a 1320 to 1957 1 to 637       637/638
(99 %)
4 diff
(99.4 %id)
AL566521 brain, fetal brain .a 1391 to 2464 1096 to 30       1067/1100
(97 %)
0 diff
(100 %id)
CB048794 Prostate .a 1434 to 2011 10 to 587       578/587
(98 %)
6 diff
(99.0 %id)
AL568106 brain, fetal brain .a 1438 to 2497 1052 to 6       1047/1063
(98 %)
0 diff
(100 %id)
BX103279 lung .a 1445 to 2048 1 to 607       607/607
(100 %)
4 diff
(99.4 %id)
W07068 lung .a 1445 to 1841 1 to 393       393/393
(100 %)
5 diff
(98.8 %id)
H20461 brain .a 1454 to 1896 1 to 453       453/453
(100 %)
15 diff
(96.7 %id)
R70303 breast .a 1462 to 1898 1 to 440       440/445
(98 %)
10 diff
(97.8 %id)
AI908337 breast .a 1482 to 2018 49 to 586       538/603
(89 %)
7 diff
(98.9 %id)
AL580189 T cells from T cell leukemia .a 1539 to 2507 969 to 1       969/969
(100 %)
12 diff
(98.8 %id)
BF693812 muscle (skeletal) .a 1559 to 2280 1 to 718       718/798
(89 %)
33 diff
(95.9 %id)
AA353516   .a 1593 to 1920 1 to 330       330/330
(100 %)
2 diff
(99.4 %id)
TI_149311800   .a 1731 to 2536 890 to 100   AAA   791/934
(84 %)
21 diff
(97.8 %id)
TI_149296160   .a 1794 to 2536 854 to 118       737/1015
(72 %)
0 diff
(100 %id)
BM977562 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1842 to 2536 713 to 19   AAA   695/695
(100 %)
1 diff
(99.9 %id)
AW955096   .a 1860 to 1967 268 to 375       351/375
(93 %)
18 diff
(95.2 %id)
AL529827 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1865 to 2517 641 to 1   fully sequenced,   641/641
(100 %)
8 diff
(98.8 %id)
CA423448 cell lines, Chondrosarcoma .a 1901 to 2536 654 to 19   AAA   636/636
(100 %)
1 diff
(99.9 %id)
BF439107 pooled .a 1903 to 2536 634 to 1       634/634
(100 %)
10 diff
(98.5 %id)
BQ447900 Knee, Osteoarthritic Cartilage .a 1935 to 2536 620 to 19   AAA   602/602
(100 %)
1 diff
(99.9 %id)
BU608019 Human Lung Epithelial cells, lung .a 1943 to 2536 612 to 19   AAA   594/594
(100 %)
3 diff
(99.5 %id)
CF124636 CNCAP(3)T-225 cell line, Prostate .a 1959 to 2493 37 to 571       535/571
(93 %)
6 diff
(99.0 %id)
TI_154184989   .a 1959 to 2536 108 to 685   AAA   578/607
(95 %)
6 diff
(99.1 %id)
AW069731 bone marrow stroma .a 1973 to 2536 588 to 21   AAA   568/568
(100 %)
5 diff
(99.2 %id)
BF946491 nervous_normal .a 1995 to 2351 2 to 358       357/364
(98 %)
8 diff
(97.9 %id)
CR741848 brain, glioblastoma (pooled) .a 2012 to 2481 1 to 470       470/470
(100 %)
1 diff
(99.8 %id)
CB048793 Prostate .a 2027 to 2536 537 to 28   AAA   510/510
(100 %)
2 diff
(99.7 %id)
BQ893614 dorsal root ganglia .a 2044 to 2536 1 to 493   AAA   493/493
(100 %)
1 diff
(99.8 %id)
BI260466 cervical carcinoma cell line, cervix .a 2067 to 2537 1 to 471       471/491
(95 %)
2 diff
(99.6 %id)
AW088556 ovary, tumor, 5 pooled (see description) .a 2068 to 2536 489 to 21   AAA   469/469
(100 %)
5 diff
(99.0 %id)
AA626176   .a 2073 to 2537 467 to 4       464/467
(99 %)
0 diff
(100 %id)
BP306829   .a 2082 to 2531 1 to 450   AAA   450/450
(100 %)
2 diff
(99.6 %id)
AI760489 Kidney .a 2097 to 2536 455 to 16   AAA   440/440
(100 %)
3 diff
(99.4 %id)
AI282006   .a 2098 to 2537 447 to 8       440/447
(98 %)
0 diff
(100 %id)
BG008845 placenta_normal .a 2117 to 2534 16 to 443       428/456
(93 %)
6 diff
(98.7 %id)
AW628250 2 pooled high-grade transitional celltumors, genitourinary tract .a 2145 to 2537 401 to 9       393/401
(98 %)
0 diff
(100 %id)
AW167270 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2148 to 2537 390 to 1       390/390
(100 %)
2 diff
(99.5 %id)
N78929 lung .a 2150 to 2537 391 to 4       388/393
(98 %)
0 diff
(100 %id)
AV742031 cord Blood .a 2151 to 2534 9 to 382   AAA   374/382
(97 %)
6 diff
(98.5 %id)
H20462 brain .a 2162 to 2535 389 to 1       389/390
(99 %)
18 diff
(95.4 %id)
AI364748 ovary, tumor, 5 pooled (see description) .a 2176 to 2536 361 to 1       361/361
(100 %)
1 diff
(99.8 %id)
AW149291 Kidney, renal cell tumor .a 2181 to 2536 357 to 1       357/357
(100 %)
2 diff
(99.5 %id)
BF960638 nervous_normal .a 2207 to 2411 1 to 203       203/203
(100 %)
5 diff
(97.6 %id)
BI034991 nervous_normal .a 2222 to 2688 1 to 467   tiling clone,   467/467
(100 %)
2 diff
(99.6 %id)
EC480927 Prostate .a 2224 to 2329 11 to 116       106/116
(91 %)
6 diff
(94.9 %id)
AI051452 parathyroid gland, parathyroid tumor .a 2228 to 2536 325 to 17   AAA   309/309
(100 %)
3 diff
(99.1 %id)
AI473331 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2234 to 2537 307 to 2       306/307
(99 %)
0 diff
(100 %id)
AI682901 adenocarcinoma, Pancreas .a 2243 to 2536 294 to 1       294/294
(100 %)
1 diff
(99.7 %id)
AA653478   .a 2244 to 2536 293 to 1       293/293
(100 %)
1 diff
(99.7 %id)
AI887135 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2259 to 2536 312 to 35   AAA   278/278
(100 %)
8 diff
(97.2 %id)
AI567595 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2298 to 2536 258 to 20   AAA   239/239
(100 %)
3 diff
(98.8 %id)
C15904   .a 2299 to 2536 1 to 238       238/238
(100 %)
1 diff
(99.6 %id)
D60349   .a 2299 to 2536 239 to 1       239/239
(100 %)
3 diff
(98.8 %id)
EC527049 Prostate .a 2403 to 2505 1 to 101       101/101
(100 %)
2 diff
(98.1 %id)
DA304944 hippocampus .b 1 to 581 2 to 582   tiling clone, capped   581/581
(100 %)
3 diff
(99.5 %id)
DA853782 placenta .b 13 to 575 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA950418 Spleen .b 13 to 582 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA112727 cerebellum .b 32 to 632 2 to 602   tiling clone, capped   601/601
(100 %)
2 diff
(99.7 %id)
CN283058 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 172 to 396 1 to 225       225/225
(100 %)
6 diff
(97.4 %id)
AK091607 brain .b 199 to 3277 1 to 3079 C497Y tiling clone, available from FLJ,   3079/3079
(100 %)
4 diff
(99.9 %id)
DA515824 brain .b 200 to 744 2 to 547   capped   546/547
(99 %)
2 diff
(99.7 %id)
DA191308 amygdala .b 221 to 795 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB147013 thymus .b 222 to 730 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
DA460608 tongue, tumor tissue .b 225 to 809 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA509910 brain .b 230 to 809 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA773662 brain .b 283 to 854 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA498930 brain .b 286 to 850 2 to 566   capped   565/566
(99 %)
2 diff
(99.7 %id)
DA739819   .b 292 to 825 2 to 535   tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
DA790335 brain .b 293 to 840 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
BI919173 brain .b 312 to 1059 1 to 749       749/749
(100 %)
6 diff
(99.2 %id)
TI_57240188   .b 312 to 1059 1 to 749       749/749
(100 %)
6 diff
(99.2 %id)
DA741554   .b 396 to 902 2 to 508   capped   507/507
(100 %)
3 diff
(99.5 %id)
DB245962 uterus, tumor tissue .b 397 to 931 2 to 537   capped   536/536
(100 %)
3 diff
(99.5 %id)
DA742611   .b 400 to 920 2 to 522   capped   521/521
(100 %)
1 diff
(99.9 %id)
BX358497 Placenta Cot 25-normalized .b 410 to 921 1 to 511       511/511
(100 %)
2 diff
(99.7 %id)
BC024968 Eye, retinoblastoma .b 701 to 1263 563 to 1   available from MGC, Submitted on the opposite strand 563/593
(94 %)
6 diff
(99.0 %id)
BE780904 eye, retinoblastoma .b 701 to 1242 542 to 1   available from MGC, AAA Submitted on the opposite strand 542/623
(86 %)
6 diff
(99.1 %id)
DN994804 brain, whole brain .b 758 to 1276 44 to 562       519/562
(92 %)
6 diff
(99.0 %id)
CX163611 human embryonic stem cells differentiated toan early endodermal cell type .b 760 to 1597 1 to 838       838/838
(100 %)
7 diff
(99.2 %id)
BX337301 Placenta Cot 25-normalized .b 2708 to 3241 533 to 1       533/533
(100 %)
9 diff
(98.4 %id)
DB316816 brain .b 2740 to 3277 538 to 1       538/545
(98 %)
2 diff
(99.7 %id)
TI_43963572   .c 1 to 679 27 to 706   tiling clone,   680/1016
(66 %)
11 diff
(99.0 %id)
BI520195 brain, medulla .c 7 to 679 1 to 674   tiling clone,   674/984
(68 %)
5 diff
(99.5 %id)
DA870359 Prostate .c 26 to 566 2 to 543   tiling clone, capped   542/542
(100 %)
1 diff
(99.9 %id)
BI520833 brain, medulla .c 1526 to 2305 819 to 1   tiling clone,   819/1182
(69 %)
24 diff
(98.0 %id)
TI_43963573   .c 1526 to 2305 819 to 1       819/1182
(69 %)
24 diff
(98.0 %id)
DA901856   .d -11 to 461 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
DB171964 kidney, tumor tissue .d -11 to 573 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA498389 brain .d 1 to 564 7 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DB022066 testis .d 1 to 551 6 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
BG699151 brain, hippocampus .d 1 to 784 3 to 790       790/803
(98 %)
18 diff
(97.8 %id)
BG699474 brain, hippocampus .d 1 to 746 3 to 747       747/747
(100 %)
15 diff
(98.0 %id)
BM926918 brain .d 1 to 867 2 to 881   tiling clone,   881/986
(89 %)
21 diff
(97.9 %id)
DA624187 Kidney .d 2 to 544 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
TI_57179738   .d 3 to 784 63 to 843       781/848
(92 %)
11 diff
(98.8 %id)
TI_45214267   .d 3 to 673 75 to 745       671/917
(73 %)
9 diff
(99.1 %id)
CR611741 T cells (Jurkat cell line) Cot10-normalized .d 5 to 2344 1 to 2340 exact tiling clone,   2340/2340
(100 %)
0 diff
(100 %id)
BX461084 brain, fetal brain .d 5 to 989 1 to 970       970/1006
(96 %)
35 diff
(96.6 %id)
AL558349 T cells from T cell leukemia .d 5 to 1071 1 to 1058       991/1058
(93 %)
114 diff
(89.3 %id)
DA704163   .d 5 to 546 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA901713   .d 5 to 519 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
AL545694 placenta, Placenta Cot 25-normalized .d 6 to 1158 1 to 1144       1144/1144
(100 %)
10 diff
(99.2 %id)
DB444866 testis .d 6 to 431 1 to 423       427/425
(100 %)
7 diff
(98.4 %id)
TI_44170328   .d 7 to 698 87 to 780       694/780
(88 %)
8 diff
(99.0 %id)
DA941067 Spleen .d 8 to 382 2 to 376   capped   375/375
(100 %)
1 diff
(99.8 %id)
BI770468 pooled lung and spleen .d 9 to 784 1 to 775       775/780
(99 %)
5 diff
(99.4 %id)
AV763069 bone marrow .d 9 to 430 1 to 417       417/419
(99 %)
14 diff
(96.7 %id)
BI601143 brain, hypothalamus .d 10 to 753 1 to 750       750/836
(89 %)
17 diff
(98.0 %id)
AF151086 umbilical cord blood .d 11 to 1245 1 to 1232       1232/1289
(95 %)
31 diff
(97.6 %id)
AL539902 brain, fetal brain .d 11 to 1028 1 to 1015       1015/1018
(99 %)
14 diff
(98.7 %id)
BX464094 brain, fetal brain .d 11 to 929 1 to 924       924/924
(100 %)
11 diff
(98.9 %id)
DA751913   .d 11 to 571 2 to 562   capped   561/562
(99 %)
2 diff
(99.7 %id)
BE174043 head_neck .d 12 to 248 254 to 18     Submitted on the opposite strand 237/270
(87 %)
0 diff
(100 %id)
BG704786 brain, hippocampus .d 12 to 698 6 to 691       686/691
(99 %)
8 diff
(98.9 %id)
BI553319 brain, hippocampus .d 12 to 698 6 to 693       688/693
(99 %)
8 diff
(98.9 %id)
CF994882 Human Placenta, placenta .d 12 to 759 28 to 783       756/829
(91 %)
24 diff
(97.2 %id)
DA881910   .d 12 to 555 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA031398   .d 13 to 588 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA045670 bladder .d 13 to 599 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA058236 cerebellum .d 13 to 530 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA162983 amygdala .d 13 to 601 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
TI_44348649   .d 13 to 824 115 to 936       822/936
(87 %)
28 diff
(97.1 %id)
DA688051   .d 13 to 554 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB014823 esophageal, tumor tissue .d 13 to 579 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB273435 uterus .d 13 to 569 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BI462827 testis .d 14 to 784 1 to 771       771/784
(98 %)
13 diff
(98.4 %id)
BI559997 testis .d 14 to 824 1 to 821       821/821
(100 %)
24 diff
(97.1 %id)
DA446261 tongue, tumor tissue .d 15 to 585 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA498742 brain .d 15 to 571 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
BG721262 testis .d 15 to 673 1 to 659       659/662
(99 %)
22 diff
(96.7 %id)
DB005131 breast, tumor tissue .d 15 to 552 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA074249 cerebellum .d 16 to 577 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA199943 brain .d 16 to 592 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA204569 brain .d 16 to 598 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA494288 brain .d 16 to 562 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA501567 brain .d 16 to 587 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA504008 brain .d 16 to 558 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
AU126477   .d 16 to 674 2 to 660   capped   663/678
(97 %)
9 diff
(98.7 %id)
DA077251 cerebellum .d 17 to 582 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
TI_57181409   .d 17 to 747 49 to 779       731/779
(93 %)
6 diff
(99.3 %id)
TI_57236435   .d 17 to 836 22 to 848       827/849
(97 %)
30 diff
(96.5 %id)
DA778092 brain .d 17 to 579 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
CD702496 normal nasopharynx .d 18 to 115 17 to 116       100/116
(86 %)
8 diff
(93.2 %id)
CD703619 normal nasopharynx .d 18 to 637 31 to 650       620/650
(95 %)
10 diff
(98.5 %id)
DB492043 hypothalamus .d 18 to 411 1 to 390       390/390
(100 %)
6 diff
(98.5 %id)
DB451142.
matches multiple genes
testis .d 19 to 500 1 to 482     also hits gene PTPMT1andNDUFS3 482/482
(100 %)
1 diff
(99.8 %id)
DB472129.
matches multiple genes
hippocampus .d 19 to 518 1 to 500     also hits gene PTPMT1andNDUFS3 500/500
(100 %)
0 diff
(100 %id)
DB474501 hippocampus .d 19 to 505 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
DA624962 Kidney .d 19 to 565 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA779652 brain .d 19 to 591 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA998009   .d 19 to 579 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA131285 alzheimer cortex .d 20 to 584 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA179871 amygdala .d 20 to 514 2 to 496   capped   495/495
(100 %)
4 diff
(99.2 %id)
DA487295 brain .d 20 to 585 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA537223 heart .d 20 to 608 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA620819   .d 20 to 608 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA955811 Spleen .d 20 to 586 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB039700 testis .d 20 to 596 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB179828 kidney, tumor tissue .d 20 to 574 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA296613 hippocampus .d 21 to 608 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB478646.
matches multiple genes
hippocampus .d 21 to 488 1 to 468     also hits gene PTPMT1andNDUFS3 468/468
(100 %)
0 diff
(100 %id)
DA769389 brain .d 21 to 582 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA871667 Prostate .d 21 to 559 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
BP382538 adipose tissue .d 22 to 650 1 to 629       629/629
(100 %)
1 diff
(99.9 %id)
AK222550 adipose tissue .d 22 to 1711 1 to 1690 F37L L399P     1690/1690
(100 %)
2 diff
(99.9 %id)
AK225062 adipose tissue .d 22 to 2373 1 to 2352 F37L L399P tiling clone, AAA   2352/2352
(100 %)
4 diff
(99.9 %id)
DB469635.
matches multiple genes
hippocampus .d 22 to 475 1 to 453     also hits gene PTPMT1andNDUFS3 453/454
(99 %)
2 diff
(99.6 %id)
BM457188 embryonal carcinoma, cell line, testis .d 23 to 850 1 to 832       832/911
(91 %)
14 diff
(98.5 %id)
DA987986 synovial membrane tissue from rheumatioidarthritis .d 23 to 586 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CX869102 embryonic stem .d 24 to 863 1 to 840       840/840
(100 %)
0 diff
(100 %id)
DR761129 embryonic stem .d 25 to 853 1 to 829       829/829
(100 %)
0 diff
(100 %id)
DB248929 uterus .d 25 to 546 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
BX459845 brain, fetal brain .d 27 to 1100 1 to 1066       1066/1076
(99 %)
32 diff
(97.1 %id)
AW629719 2 pooled high-grade transitional celltumors, genitourinary tract .d 27 to 534 9 to 516       508/516
(98 %)
9 diff
(98.3 %id)
BF527092 anaplastic oligodendroglioma with 1p/19qloss, brain .d 28 to 784 1 to 755       759/946
(80 %)
22 diff
(97.7 %id)
BM544949 ovary (pool of 3) .d 30 to 999 13 to 983       971/1177
(82 %)
27 diff
(97.8 %id)
BQ057933 lymph, lymphoma, cell line .d 30 to 902 1 to 887       887/992
(89 %)
14 diff
(98.6 %id)
BQ066797 lymph, lymphoma, cell line .d 30 to 1002 1 to 986       986/1051
(93 %)
19 diff
(98.2 %id)
BU155772 melanotic melanoma, skin .d 31 to 784 1 to 755       755/829
(91 %)
5 diff
(99.4 %id)
AA355264   .d 32 to 347 1 to 319       319/356
(89 %)
4 diff
(98.9 %id)
AA355989   .d 32 to 371 1 to 345       345/349
(98 %)
8 diff
(97.8 %id)
CA390443 eye, RPE/choroid .d 32 to 529 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
BI767307 pooled lung and spleen .d 32 to 747 1 to 716       716/716
(100 %)
0 diff
(100 %id)
BI911035 leukocyte .d 32 to 836 1 to 813       813/814
(99 %)
24 diff
(97.1 %id)
BF308175 muscle, rhabdomyosarcoma .d 33 to 673 1 to 650       650/813
(79 %)
15 diff
(98.2 %id)
BF305727 muscle, rhabdomyosarcoma .d 33 to 684 1 to 650       650/650
(100 %)
5 diff
(99.3 %id)
BU154139 eye, retinoblastoma .d 33 to 876 1 to 851       851/864
(98 %)
6 diff
(99.4 %id)
BQ221609 melanotic melanoma, skin .d 34 to 784 1 to 752       752/934
(80 %)
9 diff
(99.1 %id)
BU192838 eye, retinoblastoma .d 36 to 922 1 to 889       887/909
(97 %)
9 diff
(99.1 %id)
BG747954 eye, normal pigmented retinal epithelium .d 38 to 781 1 to 746       746/759
(98 %)
10 diff
(98.7 %id)
BP420215 small intestine .d 39 to 525 13 to 499     Submitted on the opposite strand 487/499
(97 %)
6 diff
(98.8 %id)
AA339481 brain .d 42 to 307 1 to 267       267/267
(100 %)
1 diff
(99.7 %id)
DB002349 breast, tumor tissue .d 42 to 575 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
AL713735 lymph node .d 43 to 2373 1 to 2331   available from DKFZ, AAA   2331/2331
(100 %)
1 diff
(100.0 %id)
AW966305   .d 43 to 584 1 to 543       543/547
(99 %)
16 diff
(97.1 %id)
CR976991 T-Lymphocytes .d 43 to 863 1 to 821       821/821
(100 %)
0 diff
(100 %id)
BI831955 brain, medulla .d 46 to 699 27 to 680       654/680
(96 %)
0 diff
(100 %id)
TI_57173735   .d 46 to 699 27 to 680       654/680
(96 %)
0 diff
(100 %id)
BP376131 uterus .d 50 to 597 1 to 553       553/553
(100 %)
16 diff
(97.2 %id)
BX325285   .d 52 to 1041 1 to 981       981/984
(99 %)
17 diff
(98.3 %id)
BQ438946 embryonal carcinoma, cell line, testis .d 52 to 672 27 to 650       624/928
(67 %)
17 diff
(98.2 %id)
CX758681 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .d 55 to 645 170 to 755     Submitted on the opposite strand 586/842
(69 %)
60 diff
(92.9 %id)
DA016320 adrenal gland .d 56 to 530 84 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA152992 amygdala .d 56 to 560 73 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA176934 amygdala .d 56 to 559 73 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA336226 hippocampus .d 56 to 557 71 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA468826   .d 56 to 538 73 to 555   capped   554/554
(100 %)
5 diff
(99.1 %id)
DA495913 brain .d 56 to 530 76 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA517996 brain .d 56 to 540 73 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BG724389 testis .d 56 to 747 78 to 769       769/769
(100 %)
17 diff
(97.8 %id)
DA654185   .d 56 to 564 80 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
NM_018095.4   .d 56 to 2380 84 to 2408 exact RefSeq,   2408/2409
(99 %)
5 diff
(99.8 %id)
DA782581 brain .d 56 to 557 73 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AL571311 placenta, Placenta Cot 25-normalized .d 1163 to 2336 1164 to 1       1164/1167
(99 %)
20 diff
(98.3 %id)
BX325284   .d 1333 to 2363 1033 to 1       1033/1035
(99 %)
26 diff
(97.5 %id)
BX413414 brain, fetal brain .d 1489 to 2371 883 to 1       883/884
(99 %)
16 diff
(98.2 %id)
CX869023 embryonic stem .d 1673 to 2373 728 to 28   AAA   701/701
(100 %)
2 diff
(99.8 %id)
AW613320 2 pooled high-grade transitional celltumors, genitourinary tract .d 1932 to 2373 460 to 19   AAA   442/442
(100 %)
2 diff
(99.6 %id)
NM_016506.5   .e 1 to 2467 1 to 2467 exact RefSeq,   2467/2468
(99 %)
5 diff
(99.8 %id)
DA170281 amygdala .e 2 to 530 2 to 527   tiling clone, capped   526/526
(100 %)
3 diff
(99.5 %id)
DA559313   .e 3 to 502 2 to 502   capped   501/501
(100 %)
2 diff
(99.7 %id)
DA780143 brain .e 11 to 584 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DA957571 Spleen .e 12 to 569 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BC002736 Brain, neuroblastoma .e 14 to 2460 1 to 2443 exact tiling clone, available from MGC, AAA   2443/2443
(100 %)
5 diff
(99.8 %id)
AK001749   .e 19 to 2460 1 to 2442 V500I available from FLJ,   2442/2442
(100 %)
4 diff
(99.9 %id)
DA692035   .e 19 to 592 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA883418   .e 19 to 591 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
AU133417   .e 20 to 871 2 to 846   capped   845/849
(99 %)
12 diff
(98.6 %id)
DA933152 Spleen .e 20 to 502 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
CD628951   .e 21 to 678 7 to 666       659/666
(98 %)
13 diff
(98.1 %id)
DB499127.
matches multiple genes
hypothalamus .e 21 to 500 1 to 480     also hits gene PTPMT1andNDUFS3 480/480
(100 %)
1 diff
(99.8 %id)
BI598003 brain, hypothalamus .e 23 to 868 8 to 856   tiling clone,   849/903
(94 %)
21 diff
(97.7 %id)
BI669814 brain, hypothalamus .e 23 to 699 8 to 702       648/703
(92 %)
33 diff
(95.4 %id)
TI_45213265   .e 23 to 868 130 to 978       849/1025
(82 %)
24 diff
(97.7 %id)
TI_44344348   .e 23 to 584 92 to 662       571/787
(72 %)
19 diff
(97.6 %id)
DA889503   .e 32 to 591 2 to 561   capped   560/561
(99 %)
1 diff
(99.9 %id)
DB211302 trachea .e 32 to 596 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BE383295 brain, neuroblastoma .e 33 to 418 1 to 385       385/435
(88 %)
8 diff
(98.2 %id)
DB175473 kidney, tumor tissue .e 98 to 667 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
AU154758   .e 1923 to 2460 538 to 1       538/538
(100 %)
1 diff
(99.9 %id)
AK001312   .f 15 to 2369 1 to 2355 I195T A254G C443R V500I tiling clone, available from FLJ,   2355/2355
(100 %)
5 diff
(99.8 %id)
CV807321 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 54 to 765 1 to 712       712/713
(99 %)
3 diff
(99.6 %id)
NR_024222.1   .f 56 to 2376 84 to 2404 exact RefSeq, tiling clone,   2404/2405
(99 %)
5 diff
(99.8 %id)
BI859927 breast, mammary adenocarcinoma, cell line .f 66 to 906 1 to 854       854/854
(100 %)
18 diff
(97.9 %id)
TI_57188836   .f 66 to 906 53 to 906       854/854
(100 %)
18 diff
(97.9 %id)
DR003946 Liver .f 70 to 760 1 to 691       691/691
(100 %)
0 diff
(100 %id)
BE895299 melanotic melanoma, skin .f 72 to 654 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BM905159 melanotic melanoma, skin .f 74 to 998 13 to 944       932/975
(95 %)
22 diff
(97.8 %id)
TI_1948135648   .f 79 to 676 121 to 719       599/1287
(46 %)
8 diff
(99.4 %id)
TI_1948135649   .f 79 to 1043 125 to 1079       955/1341
(71 %)
43 diff
(96.8 %id)
TI_1948136005   .f 79 to 735 124 to 787       664/1352
(49 %)
22 diff
(98.4 %id)
TI_1948136006   .f 79 to 1103 126 to 1157       1030/1367
(75 %)
65 diff
(95.3 %id)
TI_1948136361   .f 79 to 664 123 to 708       586/1440
(40 %)
10 diff
(99.4 %id)
TI_1948136362   .f 79 to 1019 130 to 1083       954/1386
(68 %)
57 diff
(95.9 %id)
TI_1948136710   .f 79 to 759 122 to 805       684/1313
(52 %)
25 diff
(98.1 %id)
TI_1948136711   .f 79 to 1070 127 to 1132       1006/1371
(73 %)
71 diff
(94.9 %id)
CR457270   .f 81 to 1637 1 to 1557 V478A     1557/1557
(100 %)
2 diff
(99.9 %id)
CV026260 mixed .f 81 to 669 1 to 589       589/589
(100 %)
19 diff
(96.8 %id)
BU602010 mixed (pool of 40 RNAs) .f 136 to 942 1 to 807       807/868
(92 %)
12 diff
(98.7 %id)
TI_59380127   .f 136 to 830 42 to 737       696/738
(94 %)
13 diff
(98.3 %id)
BF970416 adrenal cortex carcinoma, cell line, adrenal gland .f 158 to 856 1 to 699       699/947
(73 %)
14 diff
(98.6 %id)
DA270060 caudate nucleus .f 225 to 786 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
AA236074 germinal center B cell .f 353 to 554 1 to 202       202/202
(100 %)
5 diff
(97.6 %id)
BM927214 brain .f 388 to 1326 1 to 948       948/1059
(89 %)
31 diff
(97.1 %id)
FN082809 breast carcinoma .f 437 to 518 81 to 1     Submitted on the opposite strand 81/87
(93 %)
1 diff
(98.9 %id)
BM013250 brain, neuroblastoma, cell line .f 554 to 830 1 to 278       278/279
(99 %)
10 diff
(96.5 %id)
H14517 whole brain .f 656 to 922 1 to 267       267/278
(96 %)
1 diff
(99.7 %id)
CX755224 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 664 to 1343 1 to 680       680/680
(100 %)
0 diff
(100 %id)
AA360184   .f 665 to 958 1 to 294       294/294
(100 %)
0 diff
(100 %id)
TI_1948136712   .f 669 to 1636 1091 to 126       966/1292
(74 %)
19 diff
(98.6 %id)
TI_1948136007   .f 674 to 1636 1088 to 126       963/1286
(74 %)
14 diff
(99.0 %id)
CX870375 embryonic stem .f 676 to 1532 1 to 857       857/857
(100 %)
0 diff
(100 %id)
CX759134 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 676 to 1417 1 to 726     Submitted on the opposite strand 726/759
(95 %)
18 diff
(97.7 %id)
BG108424 Bone, osteosarcoma, cell line .f 688 to 1175 1 to 492       492/664
(74 %)
9 diff
(98.7 %id)
TI_57165000   .f 705 to 1370 32 to 697       666/699
(95 %)
7 diff
(99.0 %id)
BI836155 pooled pancreas and spleen .f 707 to 1370 1 to 664       664/666
(99 %)
1 diff
(99.9 %id)
BG034984 adenocarcinoma, cell line, Liver .f 722 to 1512 1 to 792       792/1041
(76 %)
21 diff
(98.0 %id)
BX391877   .f 791 to 1660 881 to 11       871/945
(92 %)
0 diff
(100 %id)
TI_1948135650   .f 829 to 1636 939 to 126       814/1294
(62 %)
0 diff
(100 %id)
TI_1948135651   .f 829 to 1636 940 to 125       816/1170
(69 %)
0 diff
(100 %id)
TI_1948136363   .f 829 to 1636 939 to 126       814/1365
(59 %)
0 diff
(100 %id)
H14518 whole brain .f 1949 to 2369 448 to 16   AAA   433/433
(100 %)
16 diff
(96.4 %id)
BI908078 leukocyte .g 1 to 774 1 to 774 V224S P225S C226V S227X Q228S ... tiling clone,   774/777
(99 %)
5 diff
(99.4 %id)
TI_57235284   .g 1 to 774 37 to 810 V224S P225S C226V S227X Q228S ...     774/813
(95 %)
11 diff
(98.7 %id)
CD683603 normal nasopharynx .h 1 to 328 23 to 351   tiling clone,   329/351
(93 %)
8 diff
(97.8 %id)
DA944622 Spleen .h 10 to 546 8 to 545   capped   538/538
(100 %)
1 diff
(99.9 %id)
CN483012 eye .h 41 to 688 1 to 648   tiling clone,   648/648
(100 %)
0 diff
(100 %id)
BI601113 brain, hypothalamus .i 1 to 728 7 to 734 L138W A139P R140A T141Q V142C ... tiling clone,   734/734
(100 %)
7 diff
(99.1 %id)
TI_45214237   .i 1 to 728 89 to 816 L138W A139P R140A T141Q V142C ...     730/816
(89 %)
10 diff
(98.8 %id)
DB106509 thymus .i 1 to 566 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DB484945.
matches multiple genes
hypothalamus .i 5 to 452 1 to 450     also hits gene PTPMT1andNDUFS3 450/451
(99 %)
9 diff
(98.1 %id)
DB505387.
matches multiple genes
hypothalamus .i 5 to 461 1 to 457     also hits gene PTPMT1andNDUFS3 457/457
(100 %)
0 diff
(100 %id)
DA942146 Spleen .i 13 to 597 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA729949   .j 1 to 757 2 to 764 E13X Q57X A175G Q176P L177A ... tiling clone, capped   763/811
(94 %)
13 diff
(98.4 %id)
DB457928.
matches multiple genes
testis .k 1 to 505 1 to 505 exact tiling clone, also hits gene PTPMT1andNDUFS3 505/505
(100 %)
0 diff
(100 %id)
AV703357 adrenal gland Gene KBTBD4, variant not shown         Suspected internal deletion, this clone was ignored    
AK222985 human small intestine Gene KBTBD4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI