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Gene KAL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
149 supporting clones for gene KAL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
S60085   .a 1 to 2195 1 to 2193 S28R S36L A37G R38P A39R ... tiling clone,   2193/2193
(100 %)
10 diff
(99.6 %id)
M97252   .a 3 to 6316 1 to 6314 R98P V584I tiling clone,   6314/6314
(100 %)
7 diff
(99.9 %id)
NM_000216.2   .a 3 to 6316 1 to 6314 exact RefSeq,   6314/6314
(100 %)
0 diff
(100 %id)
TI_2016725351   .a 36 to 782 758 to 11       748/1310
(57 %)
0 diff
(100 %id)
BC137426 Brain, cerebellum, PCR rescued clones .a 38 to 2256 1 to 2219   tiling clone,   2219/2219
(100 %)
2 diff
(100.0 %id)
BC137427 Brain, cerebellum, PCR rescued clones .a 38 to 2256 1 to 2219       2219/2219
(100 %)
2 diff
(100.0 %id)
TI_2016726207   .a 51 to 1249 1191 to 4       1188/1238
(95 %)
24 diff
(98.1 %id)
DR006029 Prostate .a 89 to 478 1 to 390       390/390
(100 %)
0 diff
(100 %id)
X60299   .a 97 to 4182 8 to 4086   tiling clone,   4079/4094
(99 %)
33 diff
(99.2 %id)
AI937516 anaplastic oligodendroglioma, brain .a 108 to 543 436 to 1       436/436
(100 %)
18 diff
(95.9 %id)
AI582702 anaplastic oligodendroglioma, brain .a 171 to 563 393 to 1       393/393
(100 %)
1 diff
(99.8 %id)
AW893246 nervous_normal .a 414 to 601 19 to 205       187/205
(91 %)
6 diff
(97.1 %id)
CN417842 embryonic stem cells, cell lines H1, H7, andH9 .a 509 to 875 1 to 367       367/367
(100 %)
2 diff
(99.5 %id)
BG152781 fibrotheoma, ovary .a 598 to 1087 1 to 490     Submitted on the opposite strand 490/491
(99 %)
14 diff
(97.2 %id)
AA970936 pooled .a 600 to 1075 1 to 476     Submitted on the opposite strand 476/476
(100 %)
1 diff
(99.8 %id)
AI186695 lung .a 600 to 1128 1 to 532     Submitted on the opposite strand 532/532
(100 %)
3 diff
(99.5 %id)
AI432167 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 600 to 1357 1 to 754     Submitted on the opposite strand 754/762
(98 %)
16 diff
(98.0 %id)
AI470092 pooled .a 600 to 1176 1 to 575     Submitted on the opposite strand 575/575
(100 %)
13 diff
(97.8 %id)
AI568991 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 600 to 1200 1 to 600     Submitted on the opposite strand 600/601
(99 %)
13 diff
(97.9 %id)
AI824675 Prostate .a 600 to 837 1 to 241     Submitted on the opposite strand 241/243
(99 %)
6 diff
(97.6 %id)
AI818547 normal prostate, Prostate .a 600 to 1181 1 to 582     Submitted on the opposite strand 582/590
(98 %)
4 diff
(99.4 %id)
AW005435 anaplastic oligodendroglioma, brain .a 600 to 1359 1 to 758     Submitted on the opposite strand 758/810
(93 %)
7 diff
(99.2 %id)
H92621 eye, retina .a 630 to 1047 1 to 419     Submitted on the opposite strand 419/419
(100 %)
5 diff
(98.9 %id)
AA635598 normal prostate, Prostate .a 632 to 1019 1 to 391     Submitted on the opposite strand 391/391
(100 %)
14 diff
(96.5 %id)
BE348661 carcinoid, lung .a 646 to 1160 1 to 515     Submitted on the opposite strand 515/515
(100 %)
3 diff
(99.5 %id)
W56773 heart .a 688 to 973 1 to 292     Submitted on the opposite strand 292/298
(97 %)
15 diff
(95.0 %id)
TI_2016725349   .a 695 to 1895 1217 to 10       1206/1362
(88 %)
31 diff
(97.8 %id)
BQ375237 testis_normal .a 720 to 1085 1 to 365       365/365
(100 %)
5 diff
(98.7 %id)
BF734670 amnion_normal .a 723 to 1091 367 to 2     Submitted on the opposite strand 366/369
(99 %)
2 diff
(99.5 %id)
H92404 eye, retina .a 1080 to 1428 363 to 13     Submitted on the opposite strand 351/367
(95 %)
4 diff
(99.0 %id)
AL704788 human skeletal muscle .a 1095 to 1493 1 to 400       400/400
(100 %)
1 diff
(99.8 %id)
TI_2016730477   .a 1145 to 2256 1158 to 57     Submitted on the opposite strand 1105/1283
(86 %)
20 diff
(98.5 %id)
CD642906 Embryonic Stem cells .a 1344 to 2079 1 to 737       737/737
(100 %)
3 diff
(99.6 %id)
T28332 colon, embryo .a 1460 to 1697 1 to 238       238/238
(100 %)
1 diff
(99.6 %id)
AW996612 breast_normal .a 1542 to 1966 427 to 4     Submitted on the opposite strand 424/427
(99 %)
0 diff
(100 %id)
CN417843 embryonic stem cells, cell lines H1, H7, andH9 .a 1684 to 2359 1 to 675   tiling clone,   675/675
(100 %)
1 diff
(99.9 %id)
BM802132 duodenal adenocarcinoma, cell line, small intestine .a 1933 to 2786 1 to 862       862/965
(89 %)
14 diff
(98.6 %id)
CN417844 embryonic stem cells, cell lines H1, H7, andH9 .a 2039 to 2654 1 to 616       616/616
(100 %)
0 diff
(100 %id)
CN417839 embryonic stem cells, cell lines H1, H7, andH9 .a 2107 to 2741 1 to 635       635/635
(100 %)
2 diff
(99.7 %id)
S60088   .a 2196 to 6316 1 to 4121   tiling clone,   4121/4121
(100 %)
2 diff
(100.0 %id)
AW364274 denis_drash .a 2257 to 2476 225 to 6       220/225
(97 %)
0 diff
(100 %id)
DA809233 brain .a 2314 to 2855 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BM473419 duodenal adenocarcinoma, cell line, small intestine .a 2426 to 3456 1 to 1036       1036/1052
(98 %)
37 diff
(96.5 %id)
DB214183 trachea .a 2623 to 3169 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA721270   .a 2979 to 3520 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA737533   .a 2989 to 3720 2 to 734   capped   733/734
(99 %)
7 diff
(99.1 %id)
DA022177   .a 3033 to 3602 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
AL600573   .a 3187 to 3663 1 to 476       476/476
(100 %)
4 diff
(99.2 %id)
BM722769 eye, fetal eye .a 3191 to 3772 1 to 582     Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 582/582
(100 %)
4 diff
(99.4 %id)
AL120218 amygdala .a 3261 to 3743 1 to 483       483/488
(98 %)
1 diff
(99.8 %id)
CX787835 human embryonic stem cells .a 3472 to 4369 1 to 896       896/896
(100 %)
5 diff
(99.5 %id)
BP293374 lung .a 3529 to 4114 1 to 584       584/584
(100 %)
26 diff
(95.6 %id)
BP293625 lung .a 3529 to 4110 1 to 582       582/582
(100 %)
10 diff
(98.3 %id)
BP293642 lung .a 3529 to 4111 1 to 583       583/583
(100 %)
10 diff
(98.3 %id)
DA148655 amygdala .a 3620 to 4058 2 to 440   capped   439/439
(100 %)
0 diff
(100 %id)
AL044781 testis .a 3687 to 4176 1 to 490       490/490
(100 %)
0 diff
(100 %id)
DA751085   .a 3894 to 4466 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
AV728484 hypothalamus .a 3947 to 4575 1 to 630       630/630
(100 %)
9 diff
(98.6 %id)
BP292056 lung .a 4043 to 4611 1 to 569       569/570
(99 %)
14 diff
(97.6 %id)
BU740242 eye, fetal eye .a 4303 to 4808 522 to 16   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 507/507
(100 %)
5 diff
(99.1 %id)
AU118686 whole embryo, mainly head .a 4308 to 5121 2 to 816   capped   815/816
(99 %)
15 diff
(98.2 %id)
BP291910 lung .a 4335 to 4907 1 to 573       573/573
(100 %)
5 diff
(99.2 %id)
DB197555 trachea .a 4480 to 5027 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DA138090 alzheimer cortex .a 4494 to 5033 2 to 541   tiling clone, capped   540/540
(100 %)
1 diff
(99.9 %id)
DB211732 trachea .a 4540 to 5092 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
H17882 whole brain .a 4607 to 4990 1 to 386     Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 386/395
(97 %)
9 diff
(97.8 %id)
AU123877   .a 4675 to 5391 2 to 728   capped   727/785
(92 %)
17 diff
(97.9 %id)
BG900936 cartilage .a 4726 to 5302 86 to 662       577/595
(96 %)
3 diff
(99.5 %id)
AU309526 neuroblastoma .a 4730 to 5280 1 to 549       549/549
(100 %)
5 diff
(99.1 %id)
AU117607 whole embryo, mainly head .a 4776 to 5569 2 to 793   capped   792/799
(99 %)
5 diff
(99.4 %id)
R56155 whole brain .a 4779 to 5203 1 to 426       426/428
(99 %)
5 diff
(98.9 %id)
AU117978 whole embryo, mainly head .a 4784 to 5658 2 to 871   capped   870/872
(99 %)
22 diff
(97.5 %id)
BI755921 brain .a 4830 to 5568 1 to 740       740/740
(100 %)
4 diff
(99.5 %id)
TI_57221046   .a 4831 to 5568 33 to 771       739/771
(95 %)
6 diff
(99.3 %id)
AA057103 eye, retina .a 4848 to 5220 1 to 379       379/379
(100 %)
5 diff
(98.7 %id)
AI681147 carcinoid, lung .a 4994 to 5768 1 to 780     Submitted on the opposite strand 780/780
(100 %)
26 diff
(96.7 %id)
AA911312 carcinoid, lung .a 4998 to 5440 1 to 444     Submitted on the opposite strand 444/449
(98 %)
4 diff
(99.2 %id)
BF884949 testis_normal .a 5055 to 5340 286 to 2     Submitted on the opposite strand 285/290
(98 %)
0 diff
(100 %id)
F01088 leg muscle, skeletal muscle .a 5150 to 5484 336 to 2       335/336
(99 %)
0 diff
(100 %id)
CN417841 embryonic stem cells, cell lines H1, H7, andH9 .a 5249 to 5898 8 to 658       651/658
(98 %)
6 diff
(99.1 %id)
TI_149315716   .a 5369 to 6313 1007 to 79   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 929/1036
(89 %)
10 diff
(99.1 %id)
BF886251 testis_normal .a 5381 to 5701 325 to 2     Submitted on the opposite strand 324/325
(99 %)
0 diff
(100 %id)
BF093552 testis_normal .a 5382 to 5739 1 to 357       357/357
(100 %)
18 diff
(95.0 %id)
BF886250 testis_normal .a 5382 to 5714 343 to 5     Submitted on the opposite strand 339/343
(98 %)
0 diff
(100 %id)
BQ375518 testis_normal .a 5384 to 5739 15 to 368       354/368
(96 %)
6 diff
(98.4 %id)
AW946852 lung_tumor .a 5386 to 5739 10 to 362       353/362
(97 %)
6 diff
(98.4 %id)
BE835488 prostate_normal .a 5394 to 5753 360 to 2       359/360
(99 %)
0 diff
(100 %id)
BF884945 testis_normal .a 5394 to 5711 320 to 5     Submitted on the opposite strand 316/320
(98 %)
0 diff
(100 %id)
BF885123 testis_normal .a 5394 to 5703 322 to 3     Submitted on the opposite strand 320/322
(99 %)
0 diff
(100 %id)
BF886239 testis_normal .a 5394 to 5714 325 to 4     Submitted on the opposite strand 322/325
(99 %)
0 diff
(100 %id)
BF886254 testis_normal .a 5394 to 5714 326 to 2     Submitted on the opposite strand 325/326
(99 %)
0 diff
(100 %id)
BF888520 testis_normal .a 5394 to 5711 336 to 16     Submitted on the opposite strand 321/336
(95 %)
0 diff
(100 %id)
BF888527 testis_normal .a 5394 to 5711 320 to 1     Submitted on the opposite strand 320/320
(100 %)
7 diff
(97.9 %id)
BF888529 testis_normal .a 5394 to 5689 305 to 9     Submitted on the opposite strand 297/305
(97 %)
0 diff
(100 %id)
BF888685 testis_normal .a 5394 to 5724 330 to 1     Submitted on the opposite strand 330/330
(100 %)
2 diff
(99.4 %id)
BQ375517 testis_normal .a 5394 to 5752 360 to 7       354/360
(98 %)
0 diff
(100 %id)
BE827768 lung_tumor .a 5395 to 5728 1 to 342       342/353
(96 %)
23 diff
(93.5 %id)
BF888669 testis_normal .a 5396 to 5704 311 to 1     Submitted on the opposite strand 311/311
(100 %)
11 diff
(96.5 %id)
BF886259 testis_normal .a 5398 to 5739 1 to 340       340/340
(100 %)
8 diff
(97.7 %id)
BF886260 testis_normal .a 5403 to 5724 321 to 1     Submitted on the opposite strand 321/321
(100 %)
10 diff
(96.9 %id)
BF886245 testis_normal .a 5408 to 5739 1 to 332       332/332
(100 %)
12 diff
(96.4 %id)
BF093548 testis_normal .a 5409 to 5739 1 to 331       331/331
(100 %)
7 diff
(97.9 %id)
BF884952 testis_normal .a 5420 to 5739 1 to 318       318/318
(100 %)
6 diff
(98.2 %id)
BF888521 testis_normal .a 5421 to 5739 1 to 320       320/320
(100 %)
14 diff
(95.7 %id)
BF888535 testis_normal .a 5421 to 5739 1 to 318       318/318
(100 %)
9 diff
(97.2 %id)
BF886246 testis_normal .a 5424 to 5753 1 to 328       328/329
(99 %)
14 diff
(95.8 %id)
BF888664 testis_normal .a 5435 to 5713 291 to 11     Submitted on the opposite strand 281/291
(96 %)
0 diff
(100 %id)
BF888508 testis_normal .a 5438 to 5753 1 to 316       316/317
(99 %)
27 diff
(91.5 %id)
BF888686 testis_normal .a 5450 to 5739 1 to 290       290/290
(100 %)
9 diff
(96.9 %id)
BF093549 testis_normal .a 5458 to 5739 10 to 287       278/287
(96 %)
6 diff
(98.0 %id)
BQ181212 Knee, Osteoarthritic Cartilage .a 5488 to 6157 685 to 19   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 667/667
(100 %)
4 diff
(99.5 %id)
BF888536 testis_normal .a 5512 to 5753 242 to 2     Submitted on the opposite strand 241/242
(99 %)
0 diff
(100 %id)
AI703187 carcinoid, lung .a 5548 to 6320 773 to 1       773/773
(100 %)
6 diff
(99.3 %id)
BF886257 testis_normal .a 5583 to 5714 150 to 15     Submitted on the opposite strand 136/150
(90 %)
0 diff
(100 %id)
BG776912 lung, mucoepidermoid carcinoma .a 5597 to 6187 40 to 631       592/631
(93 %)
6 diff
(99.1 %id)
BG777103 lung, mucoepidermoid carcinoma .a 5597 to 6295 40 to 736       697/740
(94 %)
20 diff
(97.3 %id)
CB306497 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5618 to 6313 714 to 19   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 696/696
(100 %)
0 diff
(100 %id)
BE768998 prostate_tumor .a 5619 to 5725 106 to 1       106/106
(100 %)
2 diff
(98.2 %id)
TI_149303962   .a 5620 to 6315 786 to 90   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 697/698
(99 %)
3 diff
(99.6 %id)
AV731595 hypothalamus .a 5699 to 6112 1 to 410       410/420
(97 %)
4 diff
(99.1 %id)
BM981870 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5716 to 6315 617 to 17   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 601/601
(100 %)
1 diff
(99.9 %id)
BM685928 eye, Retina Foveal and Macular .a 5717 to 6019 1 to 303       303/309
(98 %)
6 diff
(98.1 %id)
AI937079 anaplastic oligodendroglioma, brain .a 5738 to 6312 577 to 1       577/577
(100 %)
62 diff
(89.3 %id)
AU144658 whole embryo, mainly head .a 5760 to 6315 552 to 1       552/554
(99 %)
7 diff
(98.8 %id)
DB370142   .a 5763 to 6313 551 to 1       551/551
(100 %)
7 diff
(98.8 %id)
AU144394 whole embryo, mainly head .a 5764 to 6315 550 to 1       550/550
(100 %)
7 diff
(98.8 %id)
AU145189 whole embryo, mainly head .a 5773 to 6315 543 to 1       543/555
(97 %)
10 diff
(98.2 %id)
TI_154069171   .a 5774 to 6320 637 to 91       547/641
(85 %)
0 diff
(100 %id)
AI004960   .a 5793 to 6320 546 to 19       528/546
(96 %)
0 diff
(100 %id)
AI027223   .a 5802 to 6320 521 to 3       519/521
(99 %)
0 diff
(100 %id)
AI278421 placenta .a 5824 to 6304 481 to 1       481/481
(100 %)
24 diff
(95.1 %id)
AI298457 carcinoid, lung .a 5843 to 6320 513 to 36       478/513
(93 %)
0 diff
(100 %id)
BP372214 umbilical cord .a 5845 to 6315 1 to 471   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 471/471
(100 %)
2 diff
(99.6 %id)
TI_151736752   .a 5845 to 6315 581 to 112   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 470/472
(99 %)
5 diff
(99.0 %id)
AA678961   .a 5850 to 6315 477 to 12   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 466/466
(100 %)
5 diff
(99.0 %id)
AI769471 2 pooled tumors (clear cell type), Kidney .a 5862 to 6316 457 to 3       455/457
(99 %)
0 diff
(100 %id)
H17883 whole brain .a 5865 to 6315 469 to 14   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 456/463
(98 %)
12 diff
(97.5 %id)
CA435944 lung, Metastatic Chondrosarcoma .a 5868 to 6315 464 to 17   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 448/460
(97 %)
1 diff
(99.8 %id)
CN417840 embryonic stem cells, DMSO-treated H9 cellline .a 5897 to 6316 8 to 427       420/429
(97 %)
1 diff
(99.8 %id)
BQ029898 lung, Metastatic Chondrosarcoma .a 6010 to 6315 322 to 17   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 306/306
(100 %)
0 diff
(100 %id)
H86458 eye, retina .a 6176 to 6309 134 to 1       134/180
(74 %)
1 diff
(99.5 %id)
TI_149314621   .b 1 to 756 852 to 95 S2X A3P P4H P5Q A6H ... tiling clone, AAA   756/933
(81 %)
7 diff
(99.3 %id)
CB321733 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 55 to 756 719 to 17   tiling clone, AAA   703/703
(100 %)
2 diff
(99.8 %id)
AA419498 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 141 to 640 1 to 500   tiling clone,   500/500
(100 %)
0 diff
(100 %id)
W19673 parathyroid gland, parathyroid tumor .b 153 to 657 1 to 509   fully sequenced,   509/509
(100 %)
13 diff
(97.5 %id)
AA410993.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 206 to 758 553 to 6   tiling clone, also hits gene APOO 548/580
(94 %)
11 diff
(98.2 %id)
BF475677 Prostate .b 264 to 756 492 to 1       492/492
(100 %)
3 diff
(99.4 %id)
AA854788 parathyroid gland, parathyroid tumor .b 294 to 756 487 to 25   AAA   463/463
(100 %)
1 diff
(99.8 %id)
AI659512 Prostate .b 297 to 753 459 to 1       459/459
(100 %)
4 diff
(99.2 %id)
N89949 parathyroid gland, parathyroid tumor .b 627 to 756 144 to 15   fully sequenced, AAA   130/130
(100 %)
0 diff
(100 %id)
AU118646 whole embryo, mainly head .c 1 to 406 2 to 407   tiling clone, fully sequenced, capped   406/406
(100 %)
2 diff
(99.6 %id)
DB356809 whole embryo, mainly head .c 376 to 855 480 to 1   tiling clone, fully sequenced,   480/480
(100 %)
2 diff
(99.6 %id)
TI_2016730189   Gene KAL1, variant not shown         Submitted on the opposite strand    
T69876 lung Gene KAL1, variant not shown         Submitted on the opposite strand    
T70205 lung Gene KAL1, variant not shown         Submitted on the opposite strand    
DB120559 thymus Gene KAL1, variant not shown       capped      
DB343941 thymus Gene KAL1, variant not shown              
TI_154038298   Gene KAL1, variant not shown       AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base)    
CA444660 lung, Metastatic Chondrosarcoma Gene KAL1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI