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Gene JRKLTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
49 supporting clones for gene JRKL back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK290579   .a 1 to 2035 2 to 2036 S59F tiling clone,   2036/2036
(100 %)
1 diff
(100.0 %id)
DC355242   .a 1 to 492 2 to 493       493/493
(100 %)
1 diff
(99.8 %id)
DC341352 thalamus .a 19 to 498 1 to 480       480/481
(99 %)
1 diff
(99.8 %id)
BC109202 PCR rescued clones .a 247 to 1871 1 to 1625 exact tiling clone,   1625/1625
(100 %)
0 diff
(100 %id)
CN410752 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 540 to 1056 1 to 517       517/517
(100 %)
1 diff
(99.9 %id)
BQ719793 dorsal root ganglia .a 897 to 1811 1 to 917       917/918
(99 %)
12 diff
(98.7 %id)
BP265076 lung .a 913 to 1572 1 to 670       670/670
(100 %)
12 diff
(98.3 %id)
BX472885   .a 1037 to 1385 1 to 349       349/349
(100 %)
1 diff
(99.8 %id)
BP334207 salivary gland .a 1045 to 1592 1 to 548       548/582
(94 %)
6 diff
(99.0 %id)
BU633595 cell lines, Chondrosarcoma .a 1130 to 1821 700 to 9   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 692/700
(98 %)
0 diff
(100 %id)
TI_159682041   .a 1147 to 1949 905 to 115       791/1063
(74 %)
0 diff
(100 %id)
BM468034 leiomyosarcoma, uterus .a 1209 to 2281 13 to 1092       1080/1099
(98 %)
29 diff
(97.4 %id)
BG403784 bladder, transitional cell papilloma, cell line .a 1862 to 2601 1 to 734       734/742
(98 %)
12 diff
(98.4 %id)
BG926222 cartilage .a 2014 to 2323 81 to 390       310/327
(94 %)
6 diff
(98.2 %id)
BG926401 cartilage .a 2014 to 2686 89 to 761   tiling clone,   673/690
(97 %)
6 diff
(99.2 %id)
TI_154110895   .a 2057 to 2852 861 to 88   AAA   774/793
(97 %)
65 diff
(91.9 %id)
BF242601 bone marrow, from acute myelogenous leukemia .a 2067 to 2729 1 to 650       650/842
(77 %)
21 diff
(97.6 %id)
AI792197 breast .a 2074 to 2561 1 to 484       484/484
(100 %)
5 diff
(99.0 %id)
BX089945 breast .a 2075 to 2734 1 to 659       659/659
(100 %)
4 diff
(99.4 %id)
CA503357 Human Lung Epithelial cells, lung .a 2119 to 2852 747 to 15   tiling clone, AAA   733/733
(100 %)
1 diff
(99.9 %id)
BM894432 insulinoma, Pancreas .a 2285 to 2836 558 to 8     Submitted on the opposite strand 551/558
(98 %)
0 diff
(100 %id)
AI733607 breast .a 2306 to 2842 545 to 10       536/545
(98 %)
0 diff
(100 %id)
FN052531 breast carcinoma .a 2321 to 2410 90 to 1     Submitted on the opposite strand 90/90
(100 %)
0 diff
(100 %id)
FN082470 breast carcinoma .a 2322 to 2407 91 to 6     Submitted on the opposite strand 86/91
(94 %)
0 diff
(100 %id)
AA991350 breast .a 2381 to 2851 470 to 1       470/470
(100 %)
2 diff
(99.6 %id)
AW662715 colon, moderately-differentiated adenocarcinoma .a 2414 to 2853 436 to 1       436/436
(100 %)
2 diff
(99.6 %id)
CA448235 Chondrosarcoma, Left Pubic Bone .a 2461 to 2852 405 to 15   AAA   391/391
(100 %)
2 diff
(99.5 %id)
BU588099 mixed (pool of 40 RNAs) .a 2689 to 2848 1 to 160   AAA   160/160
(100 %)
4 diff
(97.5 %id)
AW151655 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2720 to 2854 136 to 1       136/136
(100 %)
4 diff
(97.1 %id)
NM_003772.3   .b-u 1 to 3575 2 to 3576 exact RefSeq,   3576/3577
(99 %)
5 diff
(99.9 %id)
DB084056 testis .b-u 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
BX472196   .b-u 18 to 346 1 to 329       329/329
(100 %)
3 diff
(99.1 %id)
DA337876 hippocampus .b-u 20 to 620 2 to 603   capped   602/602
(100 %)
1 diff
(99.9 %id)
DA995929 synovial membrane tissue from rheumatioidarthritis .b-u 20 to 556 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
DA121807 cerebellum .b-u 27 to 583 2 to 562   capped   561/561
(100 %)
5 diff
(99.2 %id)
DB161478 thymus .b-u 31 to 510 2 to 484   capped   483/483
(100 %)
4 diff
(99.2 %id)
DA798621 brain .b-u 54 to 599 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
AK314216 testis .b-u 312 to 2230 1 to 1920 F109S T380I E433K     1920/1920
(100 %)
4 diff
(99.8 %id)
DB045606 testis .b-u 313 to 863 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DB030091 testis .b-u 345 to 944 2 to 601   tiling clone, capped   600/600
(100 %)
0 diff
(100 %id)
DB030959 testis .b-u 369 to 924 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB047634 testis .b-u 379 to 950 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DN991219 brain, whole brain .b-u 408 to 1010 26 to 628       603/633
(95 %)
2 diff
(99.7 %id)
DB047093 testis .b-u 409 to 962 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
AF004715   .b-u 700 to 3569 5 to 2872   tiling clone, AAA   2868/2872
(99 %)
6 diff
(99.8 %id)
DB335095 synovial membrane tissue from rheumatioidarthritis .b-u 2548 to 3127 584 to 1   tiling clone,   584/584
(100 %)
4 diff
(99.4 %id)
AI985103 Kidney .b-u 3234 to 3472 239 to 1       239/239
(100 %)
0 diff
(100 %id)
BC031306 testis .c 1 to 739 1 to 739 exact tiling clone, available from MGC, AAA   739/739
(100 %)
3 diff
(99.6 %id)
BI464964 testis .c 1 to 620 1 to 620 exact available from MGC,   620/774
(80 %)
12 diff
(98.5 %id)
AI017878 pooled .c 265 to 739 478 to 4       475/478
(99 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b-u, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C