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Gene KDM3BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
416 supporting clones for gene KDM3B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF338242   .a 1 to 6811 1 to 6810 A322T tiling clone,   6810/6810
(100 %)
6 diff
(100.0 %id)
NM_016604.3   .a 1 to 6813 1 to 6813 A322T RefSeq, AAA   6813/6813
(100 %)
1 diff
(100.0 %id)
BU506660 mixed (pool of 40 RNAs) .a 94 to 772 1 to 684       684/820
(83 %)
25 diff
(97.0 %id)
AI809352 pooled .a 105 to 569 1 to 464   tiling clone, Submitted on the opposite strand 464/464
(100 %)
9 diff
(98.1 %id)
BC146788 Clones donated by Kazusa DNA Research Inst. .a 120 to 6813 1 to 6692   tiling clone, AAA   6692/6692
(100 %)
7 diff
(99.9 %id)
AB029005 brain .a 121 to 6813 1 to 6691   available from KIAA,   6691/6691
(100 %)
7 diff
(99.9 %id)
BC073869 Testis, embryonal carcinoma .a 511 to 1024 13 to 525   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 513/515
(99 %)
7 diff
(98.7 %id)
BG390435 embryonal carcinoma, cell line, testis .a 511 to 1005 12 to 506   available from MGC,   495/506
(97 %)
8 diff
(98.5 %id)
CU446789 epidermis .a 603 to 1163 10 to 570       561/581
(96 %)
10 diff
(98.3 %id)
CN364051 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 651 to 1387 1 to 737       737/737
(100 %)
3 diff
(99.6 %id)
FN152141 breast carcinoma .a 684 to 777 1 to 93       93/96
(96 %)
2 diff
(98.0 %id)
AW016606   .a 748 to 1109 366 to 6   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 361/376
(96 %)
2 diff
(99.5 %id)
BC000539 Brain, neuroblastoma .a 748 to 6811 1 to 6063   tiling clone, available from MGC, AAA   6063/6063
(100 %)
4 diff
(100.0 %id)
AA524565 colon .a 781 to 1088 311 to 8   tiling clone,   308/311
(99 %)
5 diff
(98.4 %id)
CN364054 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 827 to 1369 1 to 543       543/543
(100 %)
2 diff
(99.7 %id)
BC117692 PCR rescued clones .a 838 to 5965 5129 to 2     Submitted on the opposite strand 5128/5138
(99 %)
4 diff
(100.0 %id)
BC117693 PCR rescued clones .a 838 to 5965 10 to 5137       5128/5138
(99 %)
12 diff
(99.8 %id)
BF925033 nervous_tumor .a 893 to 1365 476 to 4     Submitted on the opposite strand 473/477
(99 %)
1 diff
(99.8 %id)
GD143094   .a 942 to 1103 1 to 162   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 162/165
(98 %)
8 diff
(95.2 %id)
GD147257   .a 942 to 1018 1 to 77       77/79
(97 %)
6 diff
(92.5 %id)
DA834338 placenta .a 1007 to 1688 2 to 682   capped   681/683
(99 %)
4 diff
(99.5 %id)
BQ311965 breast_normal .a 1016 to 1376 1 to 361       361/361
(100 %)
0 diff
(100 %id)
BQ311966 breast_normal .a 1016 to 1376 1 to 361       361/361
(100 %)
1 diff
(99.8 %id)
BP222892   .a 1035 to 1617 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AL698902 human skeletal muscle .a 1095 to 1577 1 to 483       483/483
(100 %)
0 diff
(100 %id)
CN364055 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1142 to 1770 1 to 629       629/630
(99 %)
1 diff
(99.9 %id)
BF755418 colon .a 1187 to 1507 11 to 329       319/329
(96 %)
6 diff
(98.2 %id)
BF850013 lung_normal .a 1319 to 1793 20 to 493       474/507
(93 %)
9 diff
(98.3 %id)
BQ329239 lung_normal .a 1319 to 1793 12 to 487       476/501
(95 %)
9 diff
(98.3 %id)
BG956125 colon .a 1540 to 1938 403 to 5       399/403
(99 %)
0 diff
(100 %id)
CT005181 T-Lymphocytes .a 1656 to 2541 1 to 894       894/896
(99 %)
14 diff
(98.5 %id)
BM472622 embryonal carcinoma, cell line, testis .a 1703 to 2394 1 to 697       697/1074
(64 %)
20 diff
(98.2 %id)
AI084093 anaplastic oligodendroglioma, brain .a 1715 to 2052 434 to 97       338/434
(77 %)
0 diff
(100 %id)
AW502683 lymph .a 1752 to 2164 1 to 413       413/413
(100 %)
4 diff
(99.1 %id)
AW501915 lymph .a 1753 to 2205 2 to 454       453/454
(99 %)
6 diff
(98.7 %id)
TI_154157108   .a 1758 to 2250 79 to 571       493/496
(99 %)
3 diff
(99.4 %id)
TI_154158268   .a 1758 to 2302 89 to 633       545/545
(100 %)
11 diff
(98.0 %id)
BX474534   .a 1868 to 2503 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
CN364049 embryonic stem cells, cell lines H1, H7, andH9 .a 1940 to 2595 1 to 657       657/657
(100 %)
2 diff
(99.7 %id)
BQ354687 head_neck .a 2008 to 2403 1 to 398       398/398
(100 %)
12 diff
(97.0 %id)
BE888969 leiomyosarcoma, uterus .a 2047 to 2644 1 to 610       610/654
(93 %)
11 diff
(98.4 %id)
DB239118 trachea .a 2064 to 2649 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA103364 cerebellum .a 2066 to 2608 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
BP233508 coronary artery .a 2082 to 2668 1 to 587       587/587
(100 %)
5 diff
(99.2 %id)
BQ353961 head_neck .a 2105 to 2409 1 to 307       307/307
(100 %)
8 diff
(97.4 %id)
BG989822 head_neck .a 2108 to 2409 1 to 303       303/303
(100 %)
2 diff
(99.4 %id)
BF089090 head_neck .a 2113 to 2384 1 to 277       277/343
(80 %)
15 diff
(95.7 %id)
BE767781 placenta_normal .a 2121 to 2408 1 to 288       288/289
(99 %)
1 diff
(99.7 %id)
BG994026 head_neck .a 2121 to 2417 300 to 6       295/300
(98 %)
0 diff
(100 %id)
BF876834 lung_tumor .a 2387 to 2636 10 to 259       250/259
(96 %)
6 diff
(97.7 %id)
DB277677 uterus .a 2418 to 2944 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
BI871163 adenocarcinoma, cell line, Liver .a 2512 to 3284 1 to 782       780/821
(95 %)
26 diff
(96.9 %id)
TI_57230378   .a 2512 to 3284 111 to 892       780/821
(95 %)
26 diff
(96.9 %id)
AL042152 testis .a 2561 to 2928 1 to 369       369/369
(100 %)
1 diff
(99.8 %id)
BM472597 melanotic melanoma, skin .a 2562 to 3250 1 to 691       691/966
(71 %)
11 diff
(98.9 %id)
BQ216569 embryonal carcinoma, cell line, testis .a 2732 to 3596 1 to 871       871/880
(98 %)
7 diff
(99.3 %id)
CN364068 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2753 to 3450 1 to 698       698/698
(100 %)
2 diff
(99.8 %id)
CN364060 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2785 to 3401 1 to 617       617/617
(100 %)
0 diff
(100 %id)
DA246914 brain .a 2847 to 3416 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB293427   .a 2849 to 3615 2 to 767   capped   766/766
(100 %)
5 diff
(99.4 %id)
BP356602 mammary gland .a 2865 to 3446 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BF808021 colon_ins .a 2932 to 3424 9 to 500       492/500
(98 %)
8 diff
(98.4 %id)
TI_151714564   .a 2987 to 3462 96 to 571     Submitted on the opposite strand 476/1091
(43 %)
14 diff
(98.8 %id)
TI_151723109   .a 2987 to 3777 54 to 830     Submitted on the opposite strand 777/995
(78 %)
25 diff
(97.5 %id)
TI_151755130   .a 2987 to 3675 81 to 774     Submitted on the opposite strand 694/1375
(50 %)
17 diff
(98.8 %id)
DB239272 trachea .a 3001 to 3581 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA093485 cerebellum .a 3043 to 3718 2 to 677   capped   676/676
(100 %)
3 diff
(99.6 %id)
BE719091 head_neck .a 3068 to 3405 413 to 75       341/413
(82 %)
9 diff
(97.9 %id)
DA809449 brain .a 3106 to 3698 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
BQ070029 brain, neuroblastoma, cell line .a 3113 to 3859 1 to 770       770/961
(80 %)
37 diff
(96.2 %id)
CX865645 embryonic stem .a 3122 to 3872 1 to 751       751/751
(100 %)
1 diff
(99.9 %id)
DA311829 hippocampus .a 3131 to 3669 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
BQ367876 placenta_normal .a 3161 to 3386 1 to 229       229/229
(100 %)
13 diff
(94.4 %id)
CN364058 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3194 to 3855 1 to 662       662/662
(100 %)
3 diff
(99.6 %id)
DB236705 trachea .a 3200 to 3793 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
TI_1948087017   .a 3207 to 4171 130 to 1101       972/1261
(77 %)
36 diff
(97.2 %id)
TI_1948087163   .a 3207 to 3890 115 to 800       686/1275
(53 %)
44 diff
(96.6 %id)
TI_1948087310   .a 3207 to 3915 134 to 847       714/1383
(51 %)
23 diff
(98.4 %id)
TI_1948087462   .a 3207 to 3916 130 to 839       710/1343
(52 %)
12 diff
(99.2 %id)
CN364069 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3284 to 3926 1 to 643       643/643
(100 %)
6 diff
(99.1 %id)
BX486164   .a 3352 to 3766 1 to 415       415/415
(100 %)
4 diff
(99.1 %id)
BE765985 nervous_tumor .a 3404 to 3658 1 to 255       255/255
(100 %)
2 diff
(99.3 %id)
BM715014 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3412 to 4049 638 to 1     Submitted on the opposite strand 638/639
(99 %)
1 diff
(99.9 %id)
CD628075   .a 3443 to 3731 289 to 1       289/302
(95 %)
6 diff
(98.1 %id)
CD628074   .a 3452 to 3731 1 to 280       280/280
(100 %)
2 diff
(99.3 %id)
CN364057 embryonic stem cells, DMSO-treated H9 cellline .a 3476 to 4018 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
DA189118 amygdala .a 3491 to 4036 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
BQ227377 embryonal carcinoma, cell line, testis .a 3555 to 4300 1 to 749       749/842
(88 %)
7 diff
(99.2 %id)
AK025755   .a 3562 to 6806 1 to 3242   available from FLJ, AAA   3242/3242
(100 %)
7 diff
(99.8 %id)
BP242533 Liver .a 3562 to 4133 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DA726213   .a 3562 to 4131 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CF142221 lymph .a 3563 to 3871 8 to 316       309/316
(97 %)
6 diff
(98.2 %id)
CF143337 lymph .a 3563 to 4154 8 to 599       592/599
(98 %)
6 diff
(99.0 %id)
TI_154173137   .a 3563 to 4155 80 to 672       593/596
(99 %)
11 diff
(98.2 %id)
TI_154174740   .a 3563 to 4226 80 to 741       662/663
(99 %)
11 diff
(98.4 %id)
CD654290 Embryonic Stem cells .a 3590 to 4387 1 to 797       797/800
(99 %)
6 diff
(99.3 %id)
CD652697 Embryonic Stem cells .a 3590 to 4375 1 to 779       779/823
(94 %)
13 diff
(98.5 %id)
CD644019 Embryonic Stem cells .a 3590 to 4387 1 to 793       793/795
(99 %)
9 diff
(98.9 %id)
CD643299 Embryonic Stem cells .a 3590 to 4348 1 to 756       756/760
(99 %)
5 diff
(99.4 %id)
CD642647 Embryonic Stem cells .a 3591 to 4396 1 to 801       801/813
(98 %)
20 diff
(97.6 %id)
CD653212 Embryonic Stem cells .a 3591 to 4348 1 to 750       750/836
(89 %)
17 diff
(98.0 %id)
CD651968 Embryonic Stem cells .a 3591 to 4395 1 to 799       799/812
(98 %)
18 diff
(97.8 %id)
CD654524 Embryonic Stem cells .a 3591 to 4379 1 to 783       783/831
(94 %)
13 diff
(98.5 %id)
BM711077 eye, fetal eyes .a 3678 to 4049 372 to 1     Submitted on the opposite strand 372/372
(100 %)
1 diff
(99.8 %id)
EL594315 epidermis, skin .a 3722 to 4425 727 to 22     Submitted on the opposite strand 706/730
(96 %)
3 diff
(99.6 %id)
DA477743   .a 3751 to 4317 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA774914 brain .a 3767 to 4300 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DB079507 testis .a 3805 to 4376 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BQ709185 Spleen .a 3813 to 4674 10 to 873       864/927
(93 %)
31 diff
(96.7 %id)
CD644598 Embryonic Stem cells .a 3815 to 4619 1 to 803       803/872
(92 %)
18 diff
(98.0 %id)
BQ711517 Spleen .a 3817 to 4610 25 to 821       797/862
(92 %)
15 diff
(98.3 %id)
CU444759 epidermis .a 3856 to 4611 793 to 38     Submitted on the opposite strand 756/793
(95 %)
2 diff
(99.8 %id)
CN364061 embryonic stem cells, DMSO-treated H9 cellline .a 3877 to 4449 1 to 573       573/573
(100 %)
0 diff
(100 %id)
BG291786 bladder, transitional cell papilloma, cell line .a 3919 to 4536 1 to 620       620/868
(71 %)
15 diff
(98.3 %id)
AL602595 human skeletal muscle .a 3968 to 4552 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
DA083496 cerebellum .a 3983 to 4493 2 to 513   capped   512/512
(100 %)
1 diff
(99.9 %id)
DB108629 thymus .a 4026 to 4595 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CN364063 embryonic stem cells, DMSO-treated H9 cellline .a 4044 to 4592 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
DA651243   .a 4063 to 4606 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BE536160 cervix .a 4091 to 4740 1 to 653       653/775
(84 %)
28 diff
(96.4 %id)
BU934936 mixed (pool of 40 RNAs) .a 4096 to 4834 1 to 742       742/817
(90 %)
8 diff
(99.1 %id)
AA100465 brain, neuroepithelial cells .a 4162 to 4607 1 to 450       450/450
(100 %)
4 diff
(99.2 %id)
BF741677 bocio_tumor .a 4192 to 4428 237 to 1     Submitted on the opposite strand 237/237
(100 %)
3 diff
(98.8 %id)
DA773002 brain .a 4232 to 4810 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BM802414 duodenal adenocarcinoma, cell line, small intestine .a 4238 to 5095 1 to 862       862/930
(92 %)
11 diff
(98.9 %id)
CN364065 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4241 to 4817 1 to 577       577/577
(100 %)
0 diff
(100 %id)
BE773703 prostate_tumor .a 4247 to 4700 460 to 9       452/460
(98 %)
0 diff
(100 %id)
BM911107 astrocytoma grade IV, cell line, brain .a 4261 to 4700 7 to 447       441/1279
(34 %)
13 diff
(99.0 %id)
AW851458 colon .a 4268 to 4839 1 to 572       572/574
(99 %)
5 diff
(99.2 %id)
BU172148 melanotic melanoma, skin .a 4298 to 4941 1 to 647       647/824
(78 %)
6 diff
(99.3 %id)
BP239982 Liver .a 4323 to 4872 1 to 550       550/550
(100 %)
10 diff
(98.2 %id)
BE799421 lung, small cell carcinoma .a 4331 to 5091 1 to 761       761/903
(84 %)
17 diff
(98.2 %id)
AL598864   .a 4417 to 5187 1 to 771       771/774
(99 %)
3 diff
(99.7 %id)
BM460083 leiomyosarcoma, uterus .a 4464 to 5402 1 to 943       943/1042
(90 %)
33 diff
(96.9 %id)
CN483982 eye .a 4543 to 5161 1 to 619       619/619
(100 %)
0 diff
(100 %id)
TI_1948087463   .a 4543 to 5489 1073 to 125       949/1320
(71 %)
28 diff
(97.9 %id)
CD671660 eye, Iris .a 4571 to 5217 1 to 647       647/647
(100 %)
0 diff
(100 %id)
DA427479 colon .a 4576 to 5066 2 to 492   capped   491/491
(100 %)
2 diff
(99.6 %id)
BF344271 brain, glioblastoma with EGFR amplification .a 4580 to 5213 1 to 629       629/919
(68 %)
14 diff
(98.5 %id)
BE162839 head_neck .a 4589 to 4698 1 to 113       113/113
(100 %)
6 diff
(94.7 %id)
BF797742 lymph, lymphoma, cell line .a 4599 to 5325 1 to 733       734/1009
(72 %)
19 diff
(98.2 %id)
DN919962   .a 4600 to 4996 1 to 397       397/397
(100 %)
4 diff
(99.0 %id)
CT001943 T-Lymphocytes .a 4611 to 5513 1 to 902       902/902
(100 %)
2 diff
(99.8 %id)
BG170149 hypernephroma, cell line, Kidney .a 4635 to 5300 1 to 666       664/980
(67 %)
27 diff
(97.3 %id)
CD358979 testis .a 4636 to 5372 31 to 777       747/992
(75 %)
25 diff
(97.5 %id)
CN364056 embryonic stem cells, cell lines H1, H7, andH9 .a 4685 to 5433 1 to 751       751/751
(100 %)
5 diff
(99.4 %id)
BE018545 cervix .a 4686 to 5261 1 to 576       576/576
(100 %)
0 diff
(100 %id)
BY796727 eye .a 4713 to 5329 1 to 617       617/617
(100 %)
0 diff
(100 %id)
AA337372 endometrium .a 4734 to 4927 1 to 194       194/194
(100 %)
0 diff
(100 %id)
BP250441 hippocampus .a 4745 to 5332 1 to 588       588/588
(100 %)
4 diff
(99.4 %id)
CR615541 B cells (Ramos cell line) Cot 25-normalized .a 4749 to 6777 1 to 2029   tiling clone,   2029/2029
(100 %)
0 diff
(100 %id)
AL561650 B cells from Burkitt lymphoma .a 4749 to 5822 1 to 1065       1065/1069
(99 %)
14 diff
(98.7 %id)
DA712250   .a 4753 to 5323 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA715815   .a 4754 to 5299 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BG767962 melanotic melanoma, high MDR (cell line), skin .a 4760 to 5284 1 to 559       432/559
(77 %)
12 diff
(97.9 %id)
EH338114   .a 4781 to 4851 1 to 71       71/71
(100 %)
0 diff
(100 %id)
BF311794 brain, neuroblastoma .a 4786 to 5541 1 to 746       746/786
(94 %)
16 diff
(98.0 %id)
CN364066 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4792 to 5435 1 to 644       644/644
(100 %)
1 diff
(99.9 %id)
TI_57180662   .a 4805 to 5585 56 to 836       781/836
(93 %)
5 diff
(99.5 %id)
BI768210 pooled lung and spleen .a 4814 to 5585 1 to 772       772/772
(100 %)
0 diff
(100 %id)
BE265035 lung, small cell carcinoma .a 4832 to 5497 1 to 660       660/664
(99 %)
9 diff
(98.7 %id)
BF890705 marrow .a 4837 to 5362 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
FN094585 breast carcinoma .a 4839 to 4892 1 to 54       54/55
(98 %)
1 diff
(98.2 %id)
AA446376   .a 4847 to 5381 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
TI_1948087311   .a 4904 to 5489 719 to 130       590/1366
(43 %)
17 diff
(98.8 %id)
CN364064 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4917 to 5604 9 to 697       689/697
(98 %)
7 diff
(99.0 %id)
TI_57243705   .a 4918 to 5556 28 to 666       639/666
(95 %)
6 diff
(99.1 %id)
BI917674 brain .a 4919 to 5556 1 to 638       638/638
(100 %)
0 diff
(100 %id)
BQ303034 breast .a 4952 to 5406 23 to 476       454/487
(93 %)
7 diff
(98.6 %id)
AW371911 breast .a 4976 to 5443 26 to 491       466/496
(93 %)
10 diff
(98.0 %id)
AW371926 breast .a 4976 to 5443 26 to 491       466/496
(93 %)
10 diff
(98.0 %id)
BX477892   .a 4976 to 5468 1 to 493       493/493
(100 %)
0 diff
(100 %id)
AW371950 breast .a 4977 to 5368 1 to 392       392/392
(100 %)
5 diff
(98.8 %id)
DB501531 hypothalamus .a 5016 to 5500 1 to 485       485/485
(100 %)
3 diff
(99.4 %id)
BM785978 Ascites, stomach .a 5032 to 5584 1 to 553       553/553
(100 %)
5 diff
(99.1 %id)
BG507043 lung .a 5038 to 5830 1 to 795       795/795
(100 %)
23 diff
(97.2 %id)
AW371843 breast .a 5040 to 5443 1 to 406       406/419
(96 %)
7 diff
(98.4 %id)
H58029 liver and spleen .a 5053 to 5414 10 to 374       365/403
(90 %)
12 diff
(97.1 %id)
AW371845 breast .a 5054 to 5443 1 to 395       395/425
(92 %)
14 diff
(96.8 %id)
CN364053 embryonic stem cells, DMSO-treated H9 cellline .a 5057 to 5652 1 to 596       596/596
(100 %)
5 diff
(99.2 %id)
BF933046 nervous_tumor .a 5116 to 5553 1 to 438       438/439
(99 %)
6 diff
(98.7 %id)
BF530025 anaplastic oligodendroglioma with 1p/19qloss, brain .a 5133 to 5732 1 to 609       609/983
(61 %)
15 diff
(98.5 %id)
FN104156 breast carcinoma .a 5157 to 5254 1 to 97       97/97
(100 %)
1 diff
(99.0 %id)
BF346562 anaplastic oligodendroglioma with 1p/19qloss, brain .a 5184 to 5789 77 to 687       611/929
(65 %)
28 diff
(97.0 %id)
AA081985   .a 5197 to 5541 1 to 344       344/344
(100 %)
3 diff
(99.2 %id)
BQ303454 breast .a 5209 to 5738 28 to 555       528/555
(95 %)
9 diff
(98.4 %id)
AA379569 skin .a 5215 to 5557 1 to 342       342/342
(100 %)
1 diff
(99.8 %id)
BF032568 adenocarcinoma, ovary .a 5220 to 6009 1 to 794       794/958
(82 %)
34 diff
(96.5 %id)
AW580325 head_neck .a 5231 to 5376 146 to 1       146/146
(100 %)
0 diff
(100 %id)
BF992343 placenta_normal .a 5234 to 5810 584 to 10       575/584
(98 %)
0 diff
(100 %id)
BE896684 melanotic melanoma, skin .a 5235 to 5939 1 to 702       702/938
(74 %)
13 diff
(98.7 %id)
BE082546 breast .a 5239 to 5401 1 to 163       163/163
(100 %)
0 diff
(100 %id)
F05650 brain, total brain .a 5239 to 5539 1 to 301       301/301
(100 %)
1 diff
(99.7 %id)
F08109 brain, total brain .a 5239 to 5556 1 to 318       318/318
(100 %)
1 diff
(99.7 %id)
DB245809 uterus, tumor tissue .a 5247 to 5820 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BE081631 breast .a 5270 to 5522 1 to 253       253/255
(99 %)
11 diff
(95.7 %id)
AV749392 Pituitary .a 5271 to 5637 1 to 354       354/354
(100 %)
13 diff
(96.4 %id)
BP325989 prostata .a 5281 to 5864 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
CN364052 embryonic stem cells, cell lines H1, H7, andH9 .a 5295 to 5875 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
TI_57236890   .a 5315 to 6154 63 to 904       842/904
(93 %)
18 diff
(98.1 %id)
BI910967 leukocyte .a 5317 to 6154 1 to 840       840/840
(100 %)
12 diff
(98.6 %id)
BG110155 Bone, osteosarcoma, cell line .a 5347 to 6179 13 to 832       820/917
(89 %)
45 diff
(95.1 %id)
W28844 eye, retina .a 5355 to 5843 507 to 19       489/626
(78 %)
0 diff
(100 %id)
CN364071 embryonic stem cells, cell lines H1, H7, andH9 .a 5371 to 5966 1 to 595       595/595
(100 %)
4 diff
(99.4 %id)
BG258052 embryonal carcinoma, cell line, testis .a 5380 to 6213 1 to 834       834/834
(100 %)
34 diff
(96.0 %id)
BM740930 stomach .a 5380 to 5962 1 to 583       583/583
(100 %)
9 diff
(98.5 %id)
BM765813 stomach .a 5380 to 6038 1 to 659       659/659
(100 %)
2 diff
(99.7 %id)
BM765546 stomach .a 5380 to 5883 1 to 504       504/504
(100 %)
2 diff
(99.7 %id)
BM771616 stomach .a 5380 to 6044 1 to 665       665/665
(100 %)
2 diff
(99.7 %id)
AL042153 testis .a 6137 to 6803 669 to 5       665/669
(99 %)
0 diff
(100 %id)
DB383365   .a 6235 to 6811 576 to 1       576/576
(100 %)
23 diff
(96.1 %id)
BE302140 cervix .a 6298 to 6811 512 to 1       512/512
(100 %)
2 diff
(99.7 %id)
DB381552 placenta .a 6408 to 6728 320 to 1       320/324
(98 %)
3 diff
(99.1 %id)
F04349 brain, total brain .a 6644 to 6810 167 to 1       167/167
(100 %)
1 diff
(99.5 %id)
H57938 liver and spleen .a 6680 to 6811 133 to 3       131/133
(98 %)
0 diff
(100 %id)
AF251039 bone marrow .b 1 to 6324 2 to 6325 C225R tiling clone, AAA   6325/6325
(100 %)
8 diff
(99.9 %id)
W05735 lung .b 4944 to 5496 1 to 556       556/571
(97 %)
9 diff
(98.5 %id)
N74892 lung .b 6179 to 6329 151 to 3       149/151
(98 %)
0 diff
(100 %id)
DC334542 hippocampus .c 1 to 554 1 to 554   tiling clone,   554/554
(100 %)
1 diff
(99.9 %id)
AK304371 trachea .c 4 to 3037 1 to 3034   tiling clone,   3034/3034
(100 %)
2 diff
(100.0 %id)
DC418367 trachea .c 4 to 587 1 to 584       584/584
(100 %)
0 diff
(100 %id)
CD656202 Embryonic Stem cells .d 1 to 774 1 to 770   tiling clone,   770/776
(99 %)
7 diff
(99.1 %id)
BP347712 brain .d 609 to 1038 1 to 430   tiling clone,   430/452
(95 %)
3 diff
(99.4 %id)
BX955327   .e-u 1 to 468 1 to 468   tiling clone,   468/468
(100 %)
2 diff
(99.6 %id)
H43376 breast .e-u 427 to 852 1 to 434   tiling clone,   434/434
(100 %)
11 diff
(97.5 %id)
H43325 breast .e-u 1239 to 1661 432 to 1   tiling clone,   432/440
(98 %)
10 diff
(97.8 %id)
DB126273 thymus .f 1 to 575 2 to 576 V114I tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
N44316   .g 1 to 628 1 to 628 A152T tiling clone,   628/629
(99 %)
4 diff
(99.4 %id)
L44479   .g 235 to 566 1 to 335       335/335
(100 %)
11 diff
(96.8 %id)
BG981001 colon_normal .g 398 to 689 292 to 1   tiling clone,   292/292
(100 %)
4 diff
(98.7 %id)
DB182419 liver, tumor tissue .h-u 1 to 557 2 to 558   tiling clone, to resequence, capped   557/557
(100 %)
0 diff
(100 %id)
BU149311 sympathetic trunk .h-u 1267 to 2162 1 to 903 exact tiling clone,   903/935
(96 %)
30 diff
(96.8 %id)
BG530052 embryonal carcinoma, testis .h-u 1457 to 2146 1 to 697 exact     697/775
(89 %)
19 diff
(97.6 %id)
W07489 lung .h-u 1466 to 1712 13 to 260       248/260
(95 %)
6 diff
(97.7 %id)
BX102945 lung .h-u 1468 to 2117 1 to 651 S53X     651/651
(100 %)
2 diff
(99.7 %id)
CD515768 White Matter .h-u 1476 to 2429 1 to 963 exact     963/964
(99 %)
24 diff
(97.6 %id)
BG485379 lung .h-u 1492 to 2117 1 to 629 exact     629/925
(68 %)
16 diff
(98.3 %id)
H67577 liver and spleen .h-u 1495 to 1874 1 to 387 N107E M108H A109G G110R L111G ...     387/389
(99 %)
10 diff
(97.5 %id)
CN364059 embryonic stem cells, cell lines H1, H7, andH9 .h-u 1547 to 1805 1 to 260       260/260
(100 %)
4 diff
(98.5 %id)
W89055 liver and spleen .h-u 1553 to 2015 1 to 468       468/468
(100 %)
7 diff
(98.6 %id)
Z44970 brain, total brain .h-u 1556 to 1853 1 to 300       300/300
(100 %)
2 diff
(99.4 %id)
CD356627 Blood vessels - aorta, basilar and artery .h-u 1557 to 2181 1 to 631       631/778
(81 %)
13 diff
(98.4 %id)
AA159697   .h-u 1578 to 2014 1 to 438       438/438
(100 %)
2 diff
(99.6 %id)
BM714957 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h-u 1581 to 1904 1 to 324       324/338
(95 %)
2 diff
(99.5 %id)
TI_151723045   .h-u 1581 to 1901 390 to 70   AAA   321/942
(34 %)
0 diff
(100 %id)
BM457347 embryonal carcinoma, cell line, testis .h-u 1582 to 2600 1 to 1035       1035/1043
(99 %)
27 diff
(97.5 %id)
BU656768 blood .h-u 1592 to 2009 11 to 428       418/428
(97 %)
6 diff
(98.6 %id)
BG776995 lung, mucoepidermoid carcinoma .h-u 1613 to 2350 1 to 736       736/736
(100 %)
10 diff
(98.7 %id)
BX328307   .h-u 1624 to 2562 1 to 930       930/939
(99 %)
22 diff
(97.7 %id)
BG703210 brain, hippocampus .h-u 1624 to 2186 1 to 561       561/672
(83 %)
11 diff
(98.4 %id)
DB478900 hippocampus .h-u 1631 to 2114 1 to 484       484/484
(100 %)
1 diff
(99.8 %id)
CN364050 embryonic stem cells, cell lines H1, H7, andH9 .h-u 1650 to 1937 1 to 288       288/288
(100 %)
2 diff
(99.4 %id)
BF211317 bone marrow, from chronic myelogenous leukemia .h-u 1656 to 2340 1 to 678       678/678
(100 %)
17 diff
(97.5 %id)
BG252947 adenocarcinoma, cell line, Liver .h-u 1705 to 2394 26 to 708       683/802
(85 %)
18 diff
(97.8 %id)
H14762 whole brain .h-u 1717 to 2117 1 to 414       414/449
(92 %)
17 diff
(96.3 %id)
AI468180 Prostate .h-u 1759 to 1943 188 to 4       185/195
(94 %)
0 diff
(100 %id)
BI915274 brain .h-u 1762 to 2506 1 to 744       744/744
(100 %)
2 diff
(99.8 %id)
TI_57244233   .h-u 1762 to 2506 28 to 771       744/771
(96 %)
8 diff
(99.0 %id)
CU447494 epidermis .h-u 1765 to 2548 10 to 793       784/795
(98 %)
6 diff
(99.3 %id)
CU453146 epidermis .h-u 1765 to 2540 10 to 784       775/784
(98 %)
6 diff
(99.3 %id)
N49353 melanocyte .h-u 1769 to 2165 1 to 407       407/409
(99 %)
15 diff
(96.4 %id)
BF244996 brain, glioblastoma .h-u 1775 to 2502 1 to 721       721/850
(84 %)
40 diff
(95.3 %id)
CN364067 embryonic stem cells, DMSO-treated H9 cellline .h-u 1819 to 2073 1 to 255       255/255
(100 %)
8 diff
(96.9 %id)
BG400044 Kidney .h-u 1821 to 2465 1 to 650       650/864
(75 %)
26 diff
(97.0 %id)
CR596928 Neuroblastoma Cot 10-normalized .h-u 1836 to 2837 1 to 1002   tiling clone,   1002/1002
(100 %)
0 diff
(100 %id)
AL519946 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .h-u 1836 to 2857 1 to 1018       1018/1018
(100 %)
6 diff
(99.5 %id)
BU568138 testis .h-u 1856 to 2641 1 to 795       795/796
(99 %)
17 diff
(97.9 %id)
BU679269 lung, Primary Lung Epithelial Cells .h-u 1862 to 2528 1 to 667     Submitted on the opposite strand 667/667
(100 %)
7 diff
(99.0 %id)
TI_154131882   .h-u 1866 to 2752 63 to 946     Submitted on the opposite strand 884/1094
(80 %)
8 diff
(99.3 %id)
TI_149280507   .h-u 1867 to 2574 69 to 776     Submitted on the opposite strand 708/777
(91 %)
4 diff
(99.5 %id)
CA418239 Bone, Human Chondrosarcoma Cell Line .h-u 1867 to 2563 1 to 697     Submitted on the opposite strand 697/697
(100 %)
3 diff
(99.6 %id)
BF173756 blood .h-u 1869 to 2213 1 to 349       349/349
(100 %)
24 diff
(93.2 %id)
AI797072 carcinoid, lung .h-u 1886 to 2402 1 to 517     Submitted on the opposite strand 517/517
(100 %)
2 diff
(99.7 %id)
AA464636 ovarian tumor, ovary .h-u 1901 to 2385 1 to 485       485/485
(100 %)
2 diff
(99.6 %id)
W04416 liver and spleen .h-u 1914 to 2371 1 to 464       464/465
(99 %)
18 diff
(96.2 %id)
AL583003 B cells from Burkitt lymphoma .h-u 1918 to 2835 915 to 1       915/1066
(85 %)
6 diff
(99.5 %id)
CD641012 pooled .h-u 1946 to 2433 1 to 486       486/654
(74 %)
7 diff
(99.0 %id)
BF670876 muscle (skeletal) .h-u 1947 to 2640 1 to 679       679/789
(86 %)
21 diff
(97.4 %id)
CN364070 embryonic stem cells, cell lines H1, H7, andH9 .h-u 1954 to 2363 1 to 410       410/410
(100 %)
0 diff
(100 %id)
AA348534 brain, hippocampus .h-u 1957 to 2288 1 to 332       332/332
(100 %)
2 diff
(99.4 %id)
BM714904 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h-u 1973 to 2559 1 to 587   fully sequenced,   587/587
(100 %)
1 diff
(99.9 %id)
BM793283 Ascites, stomach .h-u 1994 to 2608 1 to 615       615/615
(100 %)
3 diff
(99.6 %id)
CU455810 epidermis .h-u 2002 to 2736 750 to 16     Submitted on the opposite strand 735/750
(98 %)
0 diff
(100 %id)
TI_149274743   .h-u 2007 to 2869 942 to 93   AAA   850/987
(86 %)
18 diff
(98.2 %id)
BQ380081 uterus_tumor .h-u 2025 to 2278 263 to 4       260/266
(97 %)
0 diff
(100 %id)
BU187393 eye, retinoblastoma .h-u 2031 to 2869 1 to 835   AAA   835/835
(100 %)
5 diff
(99.5 %id)
TI_149289567   .h-u 2071 to 2869 852 to 64   AAA   789/985
(80 %)
17 diff
(98.3 %id)
BI906933 leukocyte .h-u 2079 to 2811 1 to 728       728/728
(100 %)
27 diff
(96.3 %id)
TI_57233414   .h-u 2084 to 2811 32 to 754       723/754
(95 %)
6 diff
(99.3 %id)
BQ271510 Pancreas, Purified pancreatic islet .h-u 2106 to 2671 5 to 570   fully sequenced,   566/570
(99 %)
6 diff
(99.0 %id)
BQ023995 placenta .h-u 2123 to 2786 679 to 16   AAA   664/664
(100 %)
0 diff
(100 %id)
CA976095 sciatic nerve .h-u 2124 to 2813 1 to 688       688/923
(74 %)
4 diff
(99.6 %id)
BG166581 hypernephroma, cell line, Kidney .h-u 2156 to 2862 1 to 704   AAA   704/712
(98 %)
11 diff
(98.5 %id)
AA618225 thyroid .h-u 2157 to 2499 1 to 343       343/343
(100 %)
3 diff
(99.2 %id)
FN153929 breast carcinoma .h-u 2160 to 2283 1 to 123       123/123
(100 %)
3 diff
(97.6 %id)
R27095 placenta .h-u 2195 to 2444 1 to 257       257/257
(100 %)
11 diff
(95.8 %id)
H26155 breast .h-u 2195 to 2597 1 to 414   fully sequenced, Submitted on the opposite strand 414/414
(100 %)
4 diff
(99.1 %id)
CK904028 Islets of Langerhans, Pancreas .h-u 2198 to 2784 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
FN076695 breast carcinoma .h-u 2199 to 2318 1 to 121       121/121
(100 %)
1 diff
(99.2 %id)
BF952220 nervous_normal .h-u 2203 to 2719 524 to 9       516/533
(96 %)
0 diff
(100 %id)
BM053158 Islets of Langerhans, Pancreas .h-u 2214 to 2758 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
BF964724 muscle (skeletal) .h-u 2225 to 2804 1 to 580       580/804
(72 %)
20 diff
(97.6 %id)
AW794874 uterus .h-u 2233 to 2659 1 to 426       426/433
(98 %)
8 diff
(98.2 %id)
BE091211 breast .h-u 2233 to 2722 31 to 519       489/529
(92 %)
8 diff
(98.5 %id)
BQ020749 lung, Metastatic Chondrosarcoma .h-u 2234 to 2871 655 to 19   AAA   637/637
(100 %)
3 diff
(99.6 %id)
BM968591 lung, Primary Lung Epithelial Cells .h-u 2237 to 2869 651 to 19   AAA   633/633
(100 %)
0 diff
(100 %id)
AI970299 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .h-u 2238 to 2781 541 to 1       541/541
(100 %)
8 diff
(98.6 %id)
BE004441 breast_normal .h-u 2246 to 2644 419 to 22     Submitted on the opposite strand 398/419
(94 %)
0 diff
(100 %id)
DB347600 liver, tumor tissue .h-u 2251 to 2783 533 to 1   to resequence,   533/533
(100 %)
9 diff
(98.4 %id)
BE091192 breast .h-u 2254 to 2722 1 to 469       469/470
(99 %)
18 diff
(96.2 %id)
N32173 melanocyte .h-u 2262 to 2869 600 to 1       600/603
(99 %)
11 diff
(98.2 %id)
BF956129 nervous_normal .h-u 2268 to 2713 445 to 3       443/445
(99 %)
0 diff
(100 %id)
BU681709 lung .h-u 2286 to 2869 599 to 19   AAA   581/581
(100 %)
5 diff
(99.2 %id)
BQ787690 insulinoma, Pancreas .h-u 2291 to 2849 559 to 1       559/559
(100 %)
3 diff
(99.5 %id)
EL948600 eyeball .h-u 2327 to 2749 1 to 423       423/423
(100 %)
8 diff
(98.2 %id)
H16397 whole brain .h-u 2332 to 2871 556 to 11   AAA   546/546
(100 %)
22 diff
(96.0 %id)
BE221262 malignant melanoma, metastatic to lymphnode, skin .h-u 2332 to 2798 486 to 21   AAA   466/466
(100 %)
3 diff
(99.4 %id)
AW236840 pooled germ cell tumors .h-u 2335 to 2869 534 to 2       533/534
(99 %)
0 diff
(100 %id)
AI521864 Kidney .h-u 2348 to 2872 524 to 1       524/524
(100 %)
1 diff
(99.9 %id)
AI743465 pooled .h-u 2349 to 2869 519 to 1       519/519
(100 %)
2 diff
(99.7 %id)
D60908   .h-u 2356 to 2708 1 to 356       356/356
(100 %)
3 diff
(99.2 %id)
BM704471 eye, Retina Foveal and Macular .h-u 2358 to 2869 510 to 2     Submitted on the opposite strand 509/514
(99 %)
0 diff
(100 %id)
AW193979 serous papillary carcinoma, high grade, 2pooled tumors, uterus .h-u 2361 to 2873 512 to 1       512/512
(100 %)
3 diff
(99.5 %id)
H03249 placenta .h-u 2373 to 2798 1 to 442   fully sequenced,   442/442
(100 %)
17 diff
(96.2 %id)
AI554756 anaplastic oligodendroglioma, brain .h-u 2374 to 2864 500 to 12   AAA   489/489
(100 %)
1 diff
(99.8 %id)
AI183848 lung .h-u 2375 to 2787 410 to 1       410/410
(100 %)
1 diff
(99.8 %id)
BQ023711 placenta .h-u 2377 to 2871 511 to 19   AAA   493/493
(100 %)
1 diff
(99.8 %id)
BP388698 pancreatic islet .h-u 2378 to 2871 1 to 496     Submitted on the opposite strand 496/500
(99 %)
4 diff
(99.2 %id)
BP392692 pancreatic islet .h-u 2388 to 2871 1 to 482     Submitted on the opposite strand 482/482
(100 %)
8 diff
(98.4 %id)
BE501759 Kidney .h-u 2388 to 2871 490 to 7       484/490
(98 %)
0 diff
(100 %id)
DB572734 hypothalamus .h-u 2391 to 2871 1 to 480     Submitted on the opposite strand 480/481
(99 %)
4 diff
(99.2 %id)
AA572749   .h-u 2391 to 2869 486 to 9       478/486
(98 %)
0 diff
(100 %id)
AI521442 ovary, tumor, 5 pooled (see description) .h-u 2399 to 2871 500 to 27   AAA   474/474
(100 %)
1 diff
(99.8 %id)
AI859718 serous papillary carcinoma, high grade, 2pooled tumors, uterus .h-u 2402 to 2870 470 to 3       468/470
(99 %)
0 diff
(100 %id)
AA159624   .h-u 2407 to 2869 455 to 1       455/455
(100 %)
20 diff
(95.7 %id)
AA931094 Kidney .h-u 2407 to 2869 465 to 5       461/465
(99 %)
0 diff
(100 %id)
AI242658 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2408 to 2864 456 to 1       456/456
(100 %)
3 diff
(99.4 %id)
AI637473 pooled germ cell tumors .h-u 2408 to 2871 466 to 4       463/466
(99 %)
0 diff
(100 %id)
AI912308 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 2408 to 2871 481 to 19   AAA   463/463
(100 %)
2 diff
(99.6 %id)
AI872194 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .h-u 2408 to 2871 475 to 14   AAA   462/462
(100 %)
1 diff
(99.8 %id)
AW337492 lymph node, lymphoma, follicular mixed small and largecell .h-u 2408 to 2786 379 to 1       379/379
(100 %)
0 diff
(100 %id)
AW236874 pooled germ cell tumors .h-u 2409 to 2867 457 to 3       455/457
(99 %)
0 diff
(100 %id)
AA194857 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2414 to 2780 367 to 1       367/369
(99 %)
2 diff
(99.5 %id)
W46852 senescent fibroblast .h-u 2418 to 2869 455 to 6       450/455
(98 %)
0 diff
(100 %id)
AI051292   .h-u 2420 to 2787 373 to 7       367/373
(98 %)
0 diff
(100 %id)
BF475483 sciatic nerve .h-u 2422 to 2869 454 to 10       445/454
(98 %)
0 diff
(100 %id)
AI089480 uterus .h-u 2424 to 2869 456 to 12   AAA   445/445
(100 %)
2 diff
(99.6 %id)
AI814676 adenocarcinoma, Pancreas .h-u 2425 to 2871 448 to 3       446/448
(99 %)
0 diff
(100 %id)
AI192080 uterus .h-u 2429 to 2766 337 to 1       337/337
(100 %)
5 diff
(98.6 %id)
AI000728 Kidney .h-u 2431 to 2876 445 to 1   tiling clone,   445/445
(100 %)
1 diff
(99.8 %id)
BG108916 retina, Retinal Pigment Epithelium sheets .h-u 2433 to 2575 1 to 138       138/144
(95 %)
8 diff
(94.5 %id)
AI288954 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2438 to 2869 431 to 2       430/431
(99 %)
0 diff
(100 %id)
BU752879 placenta .h-u 2438 to 2871 451 to 18   AAA   434/435
(99 %)
2 diff
(99.6 %id)
AI308933 adenocarcinoma, colon .h-u 2439 to 2871 434 to 3       432/434
(99 %)
0 diff
(100 %id)
BF445534 Prostate .h-u 2439 to 2866 428 to 1       428/428
(100 %)
0 diff
(100 %id)
BE350597 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .h-u 2440 to 2873 434 to 3       432/434
(99 %)
0 diff
(100 %id)
BQ183466 Knee, Osteoarthritic Cartilage .h-u 2442 to 2871 450 to 19   AAA   432/432
(100 %)
13 diff
(97.0 %id)
F27174 pectoral muscle (after mastectomy) .h-u 2447 to 2693 1 to 249       249/249
(100 %)
5 diff
(98.0 %id)
DB547562 hippocampus .h-u 2448 to 2869 1 to 438     Submitted on the opposite strand 438/438
(100 %)
29 diff
(93.4 %id)
AA478831.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2455 to 2797 10 to 350     also hits gene GFPT1 341/350
(97 %)
6 diff
(98.3 %id)
AI219862 pooled .h-u 2457 to 2871 415 to 1       415/415
(100 %)
0 diff
(100 %id)
AA705227 liver and spleen .h-u 2458 to 2871 411 to 1       411/411
(100 %)
6 diff
(98.6 %id)
AI458989 carcinoid, lung .h-u 2467 to 2785 324 to 6       319/324
(98 %)
0 diff
(100 %id)
BE835376 prostate_normal .h-u 2468 to 2866 397 to 1       397/398
(99 %)
14 diff
(96.5 %id)
DV460385 cochlea, ear .h-u 2468 to 2675 1 to 208       208/208
(100 %)
1 diff
(99.6 %id)
AI311839 2 pooled tumors (clear cell type), Kidney .h-u 2469 to 2871 405 to 6       400/405
(98 %)
0 diff
(100 %id)
AI439064 lymph node, lymphoma, follicular mixed small and largecell .h-u 2473 to 2869 407 to 11   AAA   397/397
(100 %)
0 diff
(100 %id)
AI590555 brain, tumor, 5 pooled (see description) .h-u 2474 to 2871 419 to 22       398/419
(94 %)
0 diff
(100 %id)
BP388350 pancreatic islet .h-u 2476 to 2849 1 to 372     Submitted on the opposite strand 372/373
(99 %)
2 diff
(99.5 %id)
AI199499 anaplastic oligodendroglioma, brain .h-u 2483 to 2869 399 to 13   AAA   387/387
(100 %)
0 diff
(100 %id)
AI539254 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .h-u 2486 to 2869 410 to 27   AAA   384/384
(100 %)
2 diff
(99.5 %id)
AI349367 lung .h-u 2487 to 2871 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
AI129380 uterus .h-u 2488 to 2870 382 to 2       381/382
(99 %)
0 diff
(100 %id)
AI241289 Kidney .h-u 2489 to 2871 382 to 1       382/382
(100 %)
2 diff
(99.5 %id)
AI796377 2 pooled tumors (clear cell type), Kidney .h-u 2489 to 2871 384 to 4       381/384
(99 %)
0 diff
(100 %id)
AI187847   .h-u 2491 to 2869 380 to 4       377/380
(99 %)
0 diff
(100 %id)
AA650534 lymph node, lymphoma .h-u 2492 to 2869 385 to 7       379/385
(98 %)
0 diff
(100 %id)
BF093631 testis_normal .h-u 2495 to 2737 1 to 243       243/243
(100 %)
4 diff
(98.4 %id)
AL037325 brain .h-u 2497 to 2870 394 to 20   AAA   375/376
(99 %)
1 diff
(99.8 %id)
AA405454   .h-u 2501 to 2869 371 to 5       367/373
(98 %)
0 diff
(100 %id)
AI346264 adenocarcinoma, colon .h-u 2508 to 2871 366 to 4       363/366
(99 %)
0 diff
(100 %id)
AA189137   .h-u 2511 to 2869 359 to 2       358/401
(89 %)
0 diff
(100 %id)
AA829331 germinal center B cell .h-u 2511 to 2869 369 to 12   AAA   358/358
(100 %)
1 diff
(99.8 %id)
AI220204 pooled .h-u 2514 to 2871 359 to 4       356/359
(99 %)
0 diff
(100 %id)
AA836477 germinal center B cell .h-u 2524 to 2798 305 to 31   AAA   275/275
(100 %)
2 diff
(99.3 %id)
BE048898 Kidney .h-u 2526 to 2868 349 to 7       343/349
(98 %)
0 diff
(100 %id)
AA130719 colon, tumor .h-u 2529 to 2871 339 to 1       339/339
(100 %)
2 diff
(99.5 %id)
BE467734 carcinoid, lung .h-u 2529 to 2869 346 to 7       340/346
(98 %)
0 diff
(100 %id)
BM675409 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h-u 2529 to 2873 361 to 19   fully sequenced, AAA   343/343
(100 %)
1 diff
(99.8 %id)
AW874482 tumor, uterus .h-u 2530 to 2871 346 to 7       340/346
(98 %)
0 diff
(100 %id)
AW014136   .h-u 2533 to 2871 353 to 18   AAA   336/336
(100 %)
1 diff
(99.8 %id)
AI242599 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2536 to 2869 331 to 1       331/333
(99 %)
2 diff
(99.4 %id)
R26866 placenta .h-u 2538 to 2866 339 to 11       329/341
(96 %)
0 diff
(100 %id)
AA732749   .h-u 2539 to 2869 330 to 2       329/330
(99 %)
0 diff
(100 %id)
AW118489 brain, tumor, 5 pooled (see description) .h-u 2545 to 2873 327 to 4       324/327
(99 %)
0 diff
(100 %id)
N75998 liver and spleen .h-u 2547 to 2781 233 to 1       233/233
(100 %)
2 diff
(99.2 %id)
H26156 breast .h-u 2567 to 2870 305 to 1   fully sequenced, Submitted on the opposite strand 305/305
(100 %)
3 diff
(99.1 %id)
AA765077 germinal center B cell .h-u 2573 to 2869 319 to 23   AAA   297/299
(99 %)
2 diff
(99.4 %id)
AI473339 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2580 to 2853 272 to 1       272/272
(100 %)
2 diff
(99.3 %id)
BF891296 marrow .h-u 2589 to 2836 21 to 266       246/284
(86 %)
6 diff
(97.9 %id)
W88959 liver and spleen .h-u 2603 to 2872 269 to 1       269/277
(97 %)
1 diff
(99.7 %id)
F03931 brain, total brain .h-u 2608 to 2869 262 to 1       262/262
(100 %)
0 diff
(100 %id)
AI560465 anaplastic oligodendroglioma, brain .h-u 2613 to 2871 259 to 1       259/259
(100 %)
0 diff
(100 %id)
FN046376 breast carcinoma .h-u 2615 to 2672 1 to 57       57/58
(98 %)
2 diff
(96.6 %id)
AW051141 serous papillary carcinoma, high grade, 2pooled tumors, uterus .h-u 2617 to 2871 260 to 8       253/260
(97 %)
0 diff
(100 %id)
AW026934 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 2630 to 2785 161 to 8       154/161
(95 %)
0 diff
(100 %id)
AI590537 brain, tumor, 5 pooled (see description) .h-u 2632 to 2871 261 to 22   AAA   240/240
(100 %)
7 diff
(97.1 %id)
BQ271210 Pancreas, Purified pancreatic islet .h-u 2641 to 2871 231 to 1   fully sequenced,   231/231
(100 %)
2 diff
(99.2 %id)
N78631 lung .h-u 2655 to 2871 215 to 1       215/215
(100 %)
3 diff
(98.7 %id)
AI784043 serous papillary carcinoma, high grade, 2pooled tumors, uterus .h-u 2682 to 2871 189 to 2       188/189
(99 %)
0 diff
(100 %id)
CN364062 embryonic stem cells, DMSO-treated H9 cellline .h-u 2693 to 2869 1 to 176       176/178
(98 %)
2 diff
(98.9 %id)
AI277090 adenocarcinoma, colon .h-u 2710 to 2871 163 to 3       161/163
(98 %)
0 diff
(100 %id)
AA464537 ovarian tumor, ovary .h-u 2716 to 2869 153 to 2       152/153
(99 %)
0 diff
(100 %id)
FN154043 breast carcinoma .h-u 2762 to 2869 1 to 108       108/108
(100 %)
2 diff
(98.2 %id)
H03250 placenta .h-u 2768 to 2857 90 to 1   fully sequenced,   90/90
(100 %)
0 diff
(100 %id)
AA004446.
matches multiple genes
liver and spleen .i-u 1 to 323 1 to 323 E63G R64A C80X R87S Y88T ... tiling clone, This clone was ignored, also hits gene PRPSAP1 323/323
(100 %)
4 diff
(98.8 %id)
CD706792 normal nasopharynx .i-u 57 to 413 31 to 388   tiling clone,   358/388
(92 %)
6 diff
(98.5 %id)
DW438895 Liver .i-u 303 to 529 17 to 244   tiling clone,   228/244
(93 %)
6 diff
(97.6 %id)
BF790192 muscle (skeletal) .j-u 1 to 611 1 to 613 K16N L90C C91V H93I P94L tiling clone,   613/902
(67 %)
23 diff
(97.5 %id)
DB065495 testis .k 1 to 539 2 to 540   tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
CX784716 human embryonic stem cells .k 359 to 1274 1 to 915   tiling clone,   915/915
(100 %)
3 diff
(99.7 %id)
CT004826 T-Lymphocytes .k 777 to 1426 1 to 650   tiling clone,   650/654
(99 %)
1 diff
(99.9 %id)
AA766376 germinal center B cell .k 864 to 1271 411 to 4       408/411
(99 %)
2 diff
(99.6 %id)
BF690045 melanotic melanoma, high MDR (cell line), skin .k 1334 to 1838 844 to 310   tiling clone,   535/997
(53 %)
0 diff
(100 %id)
AV752535 Pituitary .l-u 1 to 638 1 to 639 exact tiling clone,   639/747
(85 %)
6 diff
(99.2 %id)
DC326416 caudate nucleus .m 1 to 555 1 to 555 exact tiling clone,   555/555
(100 %)
0 diff
(100 %id)
CD672438 eye, Iris .n-u 1 to 488 1 to 488 exact tiling clone,   488/488
(100 %)
0 diff
(100 %id)
AV646042 corresponding non cancerous liver tissue Gene KDM3B, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV706796 adrenal gland Gene KDM3B, variant not shown         Suspected internal deletion, this clone was ignored    
AV702240 adrenal gland Gene KDM3B, variant not shown         Suspected internal deletion, this clone was ignored    
AV750500 Pituitary Gene KDM3B, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV647397 corresponding non cancerous liver tissue Gene KDM3B, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BQ374784 testis_normal Gene KDM3B, variant not shown         This clone was ignored    
BI037147 nervous_tumor Gene KDM3B, variant not shown         This clone was ignored    
BC001202 Eye, retinoblastoma Gene KDM3B, variant not shown       available from MGC, AAA Suspected internal deletion, this clone was ignored    
W79290 heart Gene KDM3B, variant not shown         This clone was ignored    
W94291 heart Gene KDM3B, variant not shown         This clone was ignored    
AI368250 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus Gene KDM3B, variant not shown       AAA This clone was ignored    
BE251386 eye, retinoblastoma Gene KDM3B, variant not shown       available from MGC, Suspected internal deletion, this clone was ignored    
BE566753 bladder, carcinoma, cell line Gene KDM3B, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h-u, .i-u, .j-u, .k, .l-u, .m, .n-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI