To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene KDM3ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
269 supporting clones for gene KDM3A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB018285 brain KDM3A.a 1 to 3044 1609 to 4652 exact available from KIAA,   3044/4652
(65 %)
0 diff
(100 %id)
AK304276 trachea KDM3A.a 1 to 2541 1363 to 3903 V728L     2541/3903
(65 %)
1 diff
(100.0 %id)
BX640698 testis KDM3A.a 1 to 3044 1647 to 4690 G474R available from DKFZ, AAA   3044/4690
(64 %)
1 diff
(100.0 %id)
BX647271 human retina KDM3A.a 1 to 3045 1615 to 4659 T267A available from DKFZ, AAA   3045/4659
(65 %)
3 diff
(100.0 %id)
BX647752 human testis KDM3A.a 1 to 3044 1675 to 4718 exact tiling clone, available from DKFZ, AAA   3044/4718
(64 %)
1 diff
(100.0 %id)
BX648841 human colon endothel primary cell culture KDM3A.a 1 to 3044 1578 to 4621 K242R C503R E662G available from DKFZ, AAA   3044/4621
(65 %)
6 diff
(99.9 %id)
CR749581 salivary gland KDM3A.a 1 to 3044 1614 to 4657 exact tiling clone, available from DKFZ, AAA   3044/4657
(65 %)
0 diff
(100 %id)
BC038297 testis KDM3A.a 1 to 3044 1623 to 4666 S687* available from MGC, AAA   3044/4666
(65 %)
2 diff
(100.0 %id)
NM_018433.5   KDM3A.a 1 to 3044 1846 to 4889 exact RefSeq, AAA   3044/4889
(62 %)
0 diff
(100 %id)
NM_001146688.1   KDM3A.a 1 to 3044 1577 to 4620 exact RefSeq, AAA   3044/4620
(65 %)
0 diff
(100 %id)
AF155648 adrenal gland KDM3A.a 2 to 3044 1471 to 4513   AAA   2889/4513
(64 %)
97 diff
(97.9 %id)
CN286895 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells KDM3A.a 8 to 672 1 to 665       665/665
(100 %)
2 diff
(99.7 %id)
AL079722 testis KDM3A.a 274 to 465 9 to 200       192/209
(91 %)
1 diff
(99.6 %id)
DA277121 corpus callosum KDM3A.a 346 to 898 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BU603637 mixed (pool of 40 RNAs) KDM3A.a 431 to 1166 1 to 742       742/855
(86 %)
16 diff
(98.2 %id)
DW436135 Liver KDM3A.a 526 to 762 17 to 253       237/253
(93 %)
0 diff
(100 %id)
CN286899 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells KDM3A.a 534 to 781 1 to 248       248/248
(100 %)
3 diff
(98.8 %id)
BF889197 testis_normal KDM3A.a 577 to 981 27 to 430       404/430
(93 %)
3 diff
(99.4 %id)
BP327442 prostata KDM3A.a 606 to 1186 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP327414 prostata KDM3A.a 606 to 1186 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AU185578 skin KDM3A.a 695 to 993 299 to 1       299/310
(96 %)
3 diff
(99.1 %id)
DA884122   KDM3A.a 707 to 1274 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB113768 thymus KDM3A.a 711 to 1282 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
AK074314   KDM3A.a 759 to 3039 1 to 2281   available from FLJ, AAA   2281/2281
(100 %)
2 diff
(100.0 %id)
BP241423 Liver KDM3A.a 759 to 1338 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
CK429407 eye, lacrimal gland KDM3A.a 790 to 1396 1 to 607       607/607
(100 %)
0 diff
(100 %id)
CD657718 Embryonic Stem cells KDM3A.a 814 to 1576 54 to 815       762/844
(90 %)
4 diff
(99.6 %id)
DA707163   KDM3A.a 822 to 1399 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA307438 hippocampus KDM3A.a 831 to 1420 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
BM906417 ovary (pool of 3) KDM3A.a 964 to 1796 1 to 832       832/1024
(81 %)
15 diff
(98.6 %id)
TI_1948151296   KDM3A.a 993 to 2057 1193 to 139       1058/1419
(74 %)
43 diff
(97.0 %id)
AL039897 testis KDM3A.a 1004 to 1508 70 to 574       505/574
(87 %)
0 diff
(100 %id)
DB249475 uterus KDM3A.a 1006 to 1560 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
TI_1948151581   KDM3A.a 1015 to 2057 1171 to 133       1039/1415
(73 %)
28 diff
(98.1 %id)
BQ331412 lung_tumor KDM3A.a 1030 to 1281 181 to 435       255/435
(58 %)
2 diff
(99.6 %id)
TI_1948151022   KDM3A.a 1034 to 2055 1151 to 136       1016/1428
(71 %)
25 diff
(98.3 %id)
AW369422 breast_normal KDM3A.a 1056 to 1488 447 to 12       436/447
(97 %)
7 diff
(98.5 %id)
BF339578 brain, glioblastoma with EGFR amplification KDM3A.a 1060 to 1794 1 to 723       723/772
(93 %)
19 diff
(97.6 %id)
DB317108.
matches multiple genes
brain KDM3A.a 1109 to 1576 476 to 9     also hits gene simomo 468/482
(97 %)
1 diff
(99.8 %id)
DB172136 kidney, tumor tissue KDM3A.a 1145 to 1716 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BP419784 small intestine KDM3A.a 1146 to 1640 1 to 495     Submitted on the opposite strand 495/495
(100 %)
0 diff
(100 %id)
DA258972 caudate nucleus KDM3A.a 1154 to 1710 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
TI_1948150755   KDM3A.a 1166 to 2055 1016 to 130       887/1292
(68 %)
17 diff
(98.7 %id)
DB115817 thymus KDM3A.a 1166 to 1468 2 to 304   capped   303/303
(100 %)
0 diff
(100 %id)
TI_1948150756   KDM3A.a 1187 to 2057 996 to 134       866/1389
(62 %)
36 diff
(97.5 %id)
TI_1948151295   KDM3A.a 1194 to 2055 997 to 133       865/1375
(62 %)
25 diff
(98.2 %id)
DA537520 Kidney KDM3A.a 1209 to 1743 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
H17582 whole brain KDM3A.a 1217 to 1649 1 to 441       441/465
(94 %)
16 diff
(96.6 %id)
DA693312   KDM3A.a 1221 to 1792 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
BP196276 adrenal gland KDM3A.a 1238 to 1819 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
TI_1948151021   KDM3A.a 1248 to 2057 938 to 127       815/1330
(61 %)
29 diff
(97.9 %id)
AA327746   KDM3A.a 1267 to 1563 1 to 299       299/299
(100 %)
2 diff
(99.4 %id)
CX868329 embryonic stem KDM3A.a 1298 to 1908 1 to 611       611/611
(100 %)
0 diff
(100 %id)
AA360794   KDM3A.a 1324 to 1571 1 to 248       248/248
(100 %)
0 diff
(100 %id)
AA361482   KDM3A.a 1324 to 1576 1 to 253       253/261
(96 %)
0 diff
(100 %id)
AA314739 colon KDM3A.a 1368 to 1694 1 to 327       327/327
(100 %)
1 diff
(99.7 %id)
CD520106 pooled KDM3A.a 1368 to 2035 1 to 671       671/749
(89 %)
11 diff
(98.6 %id)
BF677909 Prostate KDM3A.a 1381 to 1979 1 to 595       595/595
(100 %)
7 diff
(98.9 %id)
AV707708 adrenal gland KDM3A.a 1403 to 1980 14 to 591       578/591
(97 %)
3 diff
(99.5 %id)
TI_1948151580   KDM3A.a 1403 to 2057 786 to 131       657/1301
(50 %)
7 diff
(99.5 %id)
CD674187 eye, lens KDM3A.a 1444 to 2008 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BQ424139 melanotic melanoma, skin KDM3A.a 1457 to 2317 1 to 864       864/864
(100 %)
4 diff
(99.6 %id)
BQ072941 leukocyte KDM3A.a 1466 to 2509 1 to 1054       1054/1054
(100 %)
23 diff
(97.9 %id)
BY797811 eye KDM3A.a 1478 to 1987 13 to 522       510/522
(97 %)
0 diff
(100 %id)
CD704983 normal nasopharynx KDM3A.a 1480 to 2069 22 to 611       590/611
(96 %)
0 diff
(100 %id)
AW378674 head_neck KDM3A.a 1484 to 1965 1 to 483       483/493
(97 %)
9 diff
(98.2 %id)
BP227018   KDM3A.a 1494 to 2075 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BM720959 eye, fetal eye KDM3A.a 1524 to 2190 1 to 667       667/667
(100 %)
0 diff
(100 %id)
BM699317 eye, fetal eyes KDM3A.a 1525 to 2163 1 to 639       639/639
(100 %)
0 diff
(100 %id)
BI859169 breast, mammary adenocarcinoma, cell line KDM3A.a 1559 to 2225 27 to 693       667/694
(96 %)
1 diff
(99.9 %id)
TI_57188132   KDM3A.a 1559 to 2225 78 to 744       667/668
(99 %)
2 diff
(99.8 %id)
CB148909 Liver KDM3A.a 1583 to 2191 1 to 608       608/608
(100 %)
1 diff
(99.9 %id)
DA780457 brain KDM3A.a 1590 to 2160 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
BQ375881 testis_normal KDM3A.a 1594 to 2012 428 to 9       420/428
(98 %)
3 diff
(99.3 %id)
W57823 heart KDM3A.a 1601 to 1873 1 to 293       291/348
(83 %)
23 diff
(93.4 %id)
N57391 placenta KDM3A.a 1635 to 2123 1 to 496       496/499
(99 %)
14 diff
(97.2 %id)
DA765430 tongue KDM3A.a 1644 to 2213 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
AA308042 colon KDM3A.a 1676 to 2029 1 to 354       354/354
(100 %)
1 diff
(99.8 %id)
AA121905   KDM3A.a 1711 to 2127 1 to 420       420/420
(100 %)
4 diff
(99.1 %id)
BM693587 eye, fetal eyes KDM3A.a 1769 to 2422 1 to 654   fully sequenced,   654/654
(100 %)
0 diff
(100 %id)
CU444301 epidermis KDM3A.a 1796 to 2451 662 to 6     Submitted on the opposite strand 657/662
(99 %)
0 diff
(100 %id)
AA346816 heart KDM3A.a 1837 to 2028 1 to 192       192/192
(100 %)
1 diff
(99.5 %id)
CU443964 epidermis KDM3A.a 1883 to 2684 17 to 818       802/818
(98 %)
1 diff
(99.9 %id)
CU456645 epidermis KDM3A.a 1883 to 2578 17 to 713       697/713
(97 %)
3 diff
(99.6 %id)
AA343867 gall bladder KDM3A.a 1908 to 2219 1 to 312       312/315
(99 %)
1 diff
(99.7 %id)
BY993820   KDM3A.a 1914 to 2624 18 to 728       711/728
(97 %)
0 diff
(100 %id)
AA127371 lung, lung carcinoma KDM3A.a 1926 to 2373 1 to 448       448/448
(100 %)
1 diff
(99.8 %id)
BG290633 bladder, transitional cell papilloma, cell line KDM3A.a 1939 to 2769 1 to 832       832/1225
(67 %)
25 diff
(98.0 %id)
W31401 parathyroid gland, parathyroid tumor KDM3A.a 1940 to 2282 1 to 345       345/346
(99 %)
6 diff
(98.3 %id)
BX118305 parathyroid gland, parathyroid tumor KDM3A.a 1943 to 2598 1 to 656       656/656
(100 %)
0 diff
(100 %id)
BQ345654 nervous_tumor KDM3A.a 1991 to 2433 460 to 20       441/460
(95 %)
2 diff
(99.6 %id)
N45642 multiple sclerosis lesions KDM3A.a 1998 to 2291 1 to 299       299/332
(90 %)
10 diff
(97.0 %id)
BM693249 eye, Retina Foveal and Macular KDM3A.a 2047 to 2494 1 to 448   fully sequenced,   448/448
(100 %)
0 diff
(100 %id)
AA173466   KDM3A.a 2061 to 2416 1 to 355       355/355
(100 %)
1 diff
(99.8 %id)
BG181112 adenocarcinoma, cell line, Prostate KDM3A.a 2071 to 2808 1 to 738       738/845
(87 %)
15 diff
(98.3 %id)
BI036981 nervous_tumor KDM3A.a 2072 to 2409 348 to 11       338/348
(97 %)
1 diff
(99.8 %id)
AA102012 colon, tumor KDM3A.a 2073 to 2475 1 to 405       405/405
(100 %)
4 diff
(99.1 %id)
T32519 gallbladder KDM3A.a 2085 to 2406 1 to 322       322/322
(100 %)
0 diff
(100 %id)
AW956554   KDM3A.a 2086 to 2560 1 to 475       475/476
(99 %)
1 diff
(99.8 %id)
BM822555 stomach KDM3A.a 2114 to 2605 1 to 491       491/491
(100 %)
4 diff
(99.2 %id)
AA860340   KDM3A.a 2119 to 2631 517 to 5       513/517
(99 %)
18 diff
(96.6 %id)
FN080673 breast carcinoma KDM3A.a 2121 to 2192 1 to 71       71/72
(98 %)
4 diff
(94.5 %id)
TI_149274585   KDM3A.a 2122 to 3044 997 to 96   AAA   902/1003
(89 %)
25 diff
(97.6 %id)
EL954735 eyeball KDM3A.a 2140 to 2468 1 to 316       316/316
(100 %)
11 diff
(96.6 %id)
BE004570 breast_normal KDM3A.a 2143 to 2354 1 to 212       212/212
(100 %)
8 diff
(96.3 %id)
BF833570 head_neck KDM3A.a 2143 to 2625 484 to 1     Submitted on the opposite strand 484/484
(100 %)
4 diff
(99.2 %id)
EL594118 epidermis, skin KDM3A.a 2147 to 2911 775 to 19     Submitted on the opposite strand 757/829
(91 %)
13 diff
(98.5 %id)
TI_149314986   KDM3A.a 2148 to 3041 960 to 85   AAA   876/1003
(87 %)
23 diff
(97.8 %id)
BG394612 eye, retinoblastoma KDM3A.a 2149 to 2622 1 to 475       475/475
(100 %)
2 diff
(99.6 %id)
T19064   KDM3A.a 2164 to 2558 1 to 399       399/400
(99 %)
9 diff
(97.8 %id)
DB518988.
matches multiple genes
testis KDM3A.a 2167 to 2629 1 to 473     Submitted on the opposite strand, also hits gene simomo 473/474
(99 %)
11 diff
(97.7 %id)
CD356248 Blood vessels - aorta, basilar and artery KDM3A.a 2182 to 2820 1 to 645       645/767
(84 %)
18 diff
(97.7 %id)
TI_149279661   KDM3A.a 2229 to 3044 879 to 67   AAA   811/1142
(71 %)
16 diff
(98.6 %id)
AA723837   KDM3A.a 2236 to 2606 371 to 1       371/371
(100 %)
0 diff
(100 %id)
TI_149280061   KDM3A.a 2251 to 3044 869 to 85   AAA   785/796
(98 %)
26 diff
(96.8 %id)
AW969321   KDM3A.a 2260 to 2669 1 to 410       410/410
(100 %)
0 diff
(100 %id)
FN123634 breast carcinoma KDM3A.a 2271 to 2368 99 to 1     Submitted on the opposite strand 99/99
(100 %)
1 diff
(99.0 %id)
BU633473 cell lines, Chondrosarcoma KDM3A.a 2292 to 3044 768 to 19   AAA   750/750
(100 %)
3 diff
(99.6 %id)
FN074736 breast carcinoma KDM3A.a 2298 to 2369 1 to 71       71/72
(98 %)
2 diff
(97.3 %id)
TI_149296123   KDM3A.a 2304 to 3044 827 to 88   AAA   740/948
(78 %)
5 diff
(99.5 %id)
BM678585 eye, fetal eye KDM3A.a 2309 to 3044 750 to 16   AAA   735/735
(100 %)
1 diff
(99.9 %id)
BU684149 lung, Primary Lung Cystic Fibrosis EpithelialCells KDM3A.a 2313 to 3044 746 to 16   AAA   731/731
(100 %)
2 diff
(99.8 %id)
BQ006981 Chondrosarcoma, Left Pelvis KDM3A.a 2314 to 3044 745 to 16   AAA   730/730
(100 %)
2 diff
(99.8 %id)
AV688626 hepatocellular carcinoma KDM3A.a 2316 to 3042 1 to 713       713/721
(98 %)
37 diff
(94.9 %id)
BX509575.
matches multiple genes
human skeletal muscle KDM3A.a 2321 to 3045 727 to 3     also hits gene PPP2R3A 725/727
(99 %)
0 diff
(100 %id)
BX509577.
matches multiple genes
  KDM3A.a 2321 to 3045 727 to 3     also hits gene simomo 725/727
(99 %)
0 diff
(100 %id)
BU620287 Cell Line, Chondrosarcoma KDM3A.a 2323 to 3044 736 to 16   AAA   721/721
(100 %)
2 diff
(99.8 %id)
BU622316 Cell Line, Chondrosarcoma KDM3A.a 2323 to 3044 736 to 16   AAA   721/721
(100 %)
1 diff
(99.9 %id)
T11382   KDM3A.a 2324 to 2378 1 to 55       55/55
(100 %)
1 diff
(98.2 %id)
BU676236 lung, Primary Lung Epithelial Cells KDM3A.a 2338 to 3044 722 to 16   AAA   707/707
(100 %)
3 diff
(99.6 %id)
BM669172 eye, fetal eyes KDM3A.a 2392 to 3044 668 to 16   fully sequenced, AAA   653/653
(100 %)
0 diff
(100 %id)
BM669534 eye, fetal eyes KDM3A.a 2399 to 3044 661 to 16   AAA   646/646
(100 %)
0 diff
(100 %id)
BM668565 eye, Retina Foveal and Macular KDM3A.a 2464 to 3044 596 to 16   fully sequenced, AAA   581/581
(100 %)
3 diff
(99.5 %id)
AA127372 lung, lung carcinoma KDM3A.a 2568 to 3043 481 to 5       477/481
(99 %)
0 diff
(100 %id)
CX868257 embryonic stem KDM3A.a 2576 to 3044 500 to 32   AAA   469/469
(100 %)
4 diff
(99.2 %id)
AA121906   KDM3A.a 2600 to 3044 445 to 1       445/445
(100 %)
0 diff
(100 %id)
AA099619 colon, tumor KDM3A.a 2618 to 3045 440 to 3       438/440
(99 %)
0 diff
(100 %id)
N48886 multiple sclerosis lesions KDM3A.a 2653 to 3045 396 to 3       394/396
(99 %)
0 diff
(100 %id)
AA173410   KDM3A.a 2672 to 3045 379 to 1       379/379
(100 %)
4 diff
(99.0 %id)
H17474 whole brain KDM3A.a 2696 to 3044 365 to 12   AAA   354/354
(100 %)
15 diff
(95.8 %id)
W04501 parathyroid gland, parathyroid tumor KDM3A.a 2805 to 3045 248 to 8       241/257
(93 %)
0 diff
(100 %id)
AV706295 adrenal gland KDM3A.b 1 to 729 1 to 676   tiling clone, Suspected internal deletion 676/678
(99 %)
20 diff
(97.1 %id)
CF552778 Pooled muscle (cardiac and skeletal) KDM3A.b 401 to 1289 1 to 896   tiling clone,   896/897
(99 %)
14 diff
(98.5 %id)
W28748 eye, retina KDM3A.b 1277 to 1719 447 to 4   tiling clone,   444/568
(78 %)
0 diff
(100 %id)
BX495317 Liver KDM3A.b 1468 to 2085 622 to 5   tiling clone, Submitted on the opposite strand 618/622
(99 %)
0 diff
(100 %id)
AW814323 stomach KDM3A.b 1508 to 2006 17 to 513   tiling clone,   497/513
(96 %)
0 diff
(100 %id)
AW814357 stomach KDM3A.b 1508 to 2006 17 to 513       497/513
(96 %)
0 diff
(100 %id)
AA243396 germinal center B cell KDM3A.c 1 to 513 1 to 507   tiling clone,   507/509
(99 %)
7 diff
(98.7 %id)
BX649109 human fetal kidney KDM3A.c 483 to 7610 1616 to 8743 F115S tiling clone, available from DKFZ, AAA   7128/8743
(81 %)
10 diff
(99.9 %id)
AA252490 germinal center B cell KDM3A.c 1310 to 1725 416 to 1   tiling clone,   416/416
(100 %)
1 diff
(99.8 %id)
AW276896 ovary, papillary serous ovarian metastasis KDM3A.c 1478 to 1823 8 to 353     Submitted on the opposite strand 346/353
(98 %)
0 diff
(100 %id)
BY996730   KDM3A.c 1959 to 2617 1 to 659       659/659
(100 %)
5 diff
(99.3 %id)
DB078556 testis KDM3A.c 1979 to 2547 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB163523 thymus KDM3A.c 2040 to 2597 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BF875087 lung_tumor KDM3A.c 2619 to 3022 404 to 3     Submitted on the opposite strand 402/404
(99 %)
0 diff
(100 %id)
DA040939 bladder KDM3A.c 3580 to 4143 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BG991994 head_neck KDM3A.c 3714 to 4209 16 to 511       496/511
(97 %)
0 diff
(100 %id)
BF875206 lung_tumor KDM3A.c 4661 to 4800 140 to 1     Submitted on the opposite strand 140/142
(98 %)
0 diff
(100 %id)
DB295984 bladder KDM3A.c 4840 to 5373 535 to 1   tiling clone,   535/535
(100 %)
1 diff
(99.9 %id)
AA283443   KDM3A.c 5358 to 5547 184 to 1       184/216
(85 %)
6 diff
(97.3 %id)
TI_154030097   KDM3A.c 6928 to 7610 757 to 76   AAA   682/945
(72 %)
30 diff
(96.9 %id)
TI_149300117   KDM3A.c 6935 to 7610 756 to 80   AAA   677/801
(84 %)
15 diff
(98.2 %id)
CA428583 cell lines, Chondrosarcoma KDM3A.c 6938 to 7610 687 to 16   AAA   672/688
(97 %)
1 diff
(99.9 %id)
AA055360 heart KDM3A.c 6941 to 7309 1 to 375       375/375
(100 %)
6 diff
(98.4 %id)
CA432703 cell lines, Chondrosarcoma KDM3A.c 6954 to 7610 675 to 19   AAA   657/657
(100 %)
0 diff
(100 %id)
BM701240 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid KDM3A.c 6967 to 7409 1 to 443       443/443
(100 %)
0 diff
(100 %id)
BM715813 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid KDM3A.c 6967 to 7610 1 to 644   AAA   644/644
(100 %)
0 diff
(100 %id)
AA524505 colon KDM3A.c 6968 to 7611 635 to 1       635/636
(99 %)
23 diff
(96.4 %id)
BQ006582 Chondrosarcoma, Left Pelvis KDM3A.c 6994 to 7610 632 to 16   AAA   617/617
(100 %)
3 diff
(99.6 %id)
BG993714 head_neck KDM3A.c 7008 to 7342 341 to 5       337/346
(97 %)
0 diff
(100 %id)
BM969680 lung, Primary Lung Epithelial Cells KDM3A.c 7021 to 7610 605 to 16   AAA   590/590
(100 %)
0 diff
(100 %id)
BF900488 marrow KDM3A.c 7023 to 7448 1 to 422       422/423
(99 %)
22 diff
(94.8 %id)
BQ300681 bladder_tumor KDM3A.c 7026 to 7508 480 to 3       478/484
(98 %)
0 diff
(100 %id)
BQ020341 Chondrosarcoma, Left Pubic Bone KDM3A.c 7028 to 7610 598 to 16   AAA   583/583
(100 %)
0 diff
(100 %id)
BM693341 eye, Retina Foveal and Macular KDM3A.c 7042 to 7391 119 to 468       350/468
(74 %)
0 diff
(100 %id)
TI_151705966   KDM3A.c 7043 to 7608 650 to 81       570/1260
(45 %)
0 diff
(100 %id)
CN286894 embryonic stem cells, DMSO-treated H9 cellline KDM3A.c 7046 to 7611 1 to 566       566/572
(98 %)
1 diff
(99.9 %id)
BG995855 head_neck KDM3A.c 7054 to 7336 302 to 20       283/302
(93 %)
0 diff
(100 %id)
CA428987 Cell Line, Chondrosarcoma KDM3A.c 7054 to 7610 572 to 16   AAA   557/557
(100 %)
0 diff
(100 %id)
AV701710 adrenal gland KDM3A.c 7066 to 7610 1 to 545   AAA   545/545
(100 %)
7 diff
(98.8 %id)
DB340690 testis KDM3A.c 7069 to 7607 539 to 1       539/539
(100 %)
0 diff
(100 %id)
FN115855 breast carcinoma KDM3A.c 7076 to 7186 1 to 112       112/112
(100 %)
2 diff
(98.3 %id)
AA648584 Ewing's sarcoma KDM3A.c 7080 to 7309 1 to 230       230/246
(93 %)
10 diff
(96.0 %id)
TI_151712222   KDM3A.c 7104 to 7610 67 to 573   AAA Submitted on the opposite strand 507/573
(88 %)
0 diff
(100 %id)
AI769674 2 pooled tumors (clear cell type), Kidney KDM3A.c 7111 to 7418 1 to 308     Submitted on the opposite strand 308/308
(100 %)
4 diff
(98.8 %id)
BP393677 pancreatic islet KDM3A.c 7112 to 7610 1 to 500     Submitted on the opposite strand 500/500
(100 %)
1 diff
(99.8 %id)
CA442358 Fibrosarcoma KDM3A.c 7112 to 7610 514 to 16   AAA   499/499
(100 %)
6 diff
(98.8 %id)
BU679010 lung, Primary Lung Epithelial Cells KDM3A.c 7113 to 7610 513 to 16   AAA   498/498
(100 %)
0 diff
(100 %id)
AA973447 carcinoid, lung KDM3A.c 7116 to 7557 1 to 441     Submitted on the opposite strand 441/441
(100 %)
1 diff
(99.8 %id)
AI635093 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus KDM3A.c 7116 to 7611 498 to 3       496/498
(99 %)
0 diff
(100 %id)
AW191055 adenocarcinoma, Pancreas KDM3A.c 7117 to 7610 496 to 1       496/496
(100 %)
3 diff
(99.4 %id)
AA894419 carcinoid, lung KDM3A.c 7119 to 7415 1 to 297     Submitted on the opposite strand 297/297
(100 %)
0 diff
(100 %id)
BM976262 lung, Primary Lung Cystic Fibrosis EpithelialCells KDM3A.c 7122 to 7610 504 to 16   AAA   489/491
(99 %)
0 diff
(100 %id)
AI978659 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors KDM3A.c 7125 to 7611 490 to 5       486/490
(99 %)
0 diff
(100 %id)
AI138954   KDM3A.c 7126 to 7611 489 to 4       486/489
(99 %)
0 diff
(100 %id)
AI203595   KDM3A.c 7129 to 7611 488 to 6       483/488
(98 %)
0 diff
(100 %id)
AI148968   KDM3A.c 7131 to 7611 484 to 4       481/484
(99 %)
0 diff
(100 %id)
AI217968   KDM3A.c 7133 to 7611 482 to 4       479/482
(99 %)
0 diff
(100 %id)
AI033896 parathyroid gland, parathyroid tumor KDM3A.c 7135 to 7611 481 to 5       477/481
(99 %)
0 diff
(100 %id)
AA677911 liver and spleen KDM3A.c 7137 to 7610 474 to 1       474/474
(100 %)
0 diff
(100 %id)
BF905254 marrow KDM3A.c 7139 to 7412 274 to 2     Submitted on the opposite strand 273/274
(99 %)
0 diff
(100 %id)
DB521529.
matches multiple genes
testis KDM3A.c 7142 to 7610 1 to 469     Submitted on the opposite strand, also hits gene simomo 469/469
(100 %)
0 diff
(100 %id)
AA468897 colon KDM3A.c 7144 to 7595 452 to 1       452/452
(100 %)
4 diff
(99.2 %id)
CR739339   KDM3A.c 7147 to 7605 497 to 36     Submitted on the opposite strand 462/520
(88 %)
0 diff
(100 %id)
AI376151   KDM3A.c 7147 to 7611 467 to 3       465/467
(99 %)
0 diff
(100 %id)
FN098696 breast carcinoma KDM3A.c 7163 to 7269 106 to 2     Submitted on the opposite strand 105/106
(99 %)
0 diff
(100 %id)
AI356129 brain, glioblastoma (pooled) KDM3A.c 7163 to 7624 465 to 4       462/465
(99 %)
0 diff
(100 %id)
AW262777 brain, three pooled meningiomas KDM3A.c 7166 to 7607 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AI214906   KDM3A.c 7168 to 7611 446 to 3       444/446
(99 %)
0 diff
(100 %id)
FN101736 breast carcinoma KDM3A.c 7169 to 7228 59 to 1     Submitted on the opposite strand 59/60
(98 %)
2 diff
(96.7 %id)
AA588202 normal prostate, Prostate KDM3A.c 7172 to 7610 439 to 1       439/439
(100 %)
0 diff
(100 %id)
AA804658 germinal center B cell KDM3A.c 7172 to 7610 451 to 13   AAA   439/439
(100 %)
2 diff
(99.6 %id)
AI061284   KDM3A.c 7172 to 7610 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
W69149 heart KDM3A.c 7174 to 7611 447 to 1       447/447
(100 %)
19 diff
(95.8 %id)
AA927424 pooled germ cell tumors KDM3A.c 7174 to 7611 445 to 7       439/445
(98 %)
0 diff
(100 %id)
AL039914.
matches multiple genes
testis KDM3A.c 7178 to 7610 466 to 35   AAA also hits gene PLXNB3andSRPK3 432/432
(100 %)
3 diff
(99.4 %id)
CK431074 eye, lacrimal gland KDM3A.c 7180 to 7610 1 to 431       431/459
(93 %)
1 diff
(99.8 %id)
T03455   KDM3A.c 7190 to 7607 425 to 1       425/425
(100 %)
12 diff
(97.2 %id)
R46564 whole brain KDM3A.c 7191 to 7611 435 to 8       428/437
(97 %)
0 diff
(100 %id)
AI028346   KDM3A.c 7201 to 7611 413 to 3       411/413
(99 %)
0 diff
(100 %id)
AW769285 colon, moderately-differentiated adenocarcinoma KDM3A.c 7201 to 7610 410 to 1       410/410
(100 %)
0 diff
(100 %id)
AI214905   KDM3A.c 7202 to 7611 412 to 3       410/412
(99 %)
0 diff
(100 %id)
AW613248 colon, moderately-differentiated adenocarcinoma KDM3A.c 7202 to 7610 409 to 1       409/409
(100 %)
0 diff
(100 %id)
BE327951 malignant melanoma, metastatic to lymphnode, skin KDM3A.c 7202 to 7611 411 to 2       410/411
(99 %)
0 diff
(100 %id)
N63612 multiple sclerosis lesions KDM3A.c 7205 to 7611 422 to 7       416/455
(91 %)
0 diff
(100 %id)
AI041338 parathyroid gland, parathyroid tumor KDM3A.c 7207 to 7611 409 to 5       405/409
(99 %)
0 diff
(100 %id)
AA688378 normal prostate, Prostate KDM3A.c 7210 to 7605 398 to 2       397/398
(99 %)
0 diff
(100 %id)
BE939932 uterus_tumor KDM3A.c 7212 to 7332 58 to 177       120/180
(66 %)
3 diff
(98.4 %id)
AA723652   KDM3A.c 7216 to 7611 396 to 2       395/396
(99 %)
0 diff
(100 %id)
AW571940 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors KDM3A.c 7216 to 7610 395 to 1       395/395
(100 %)
3 diff
(99.3 %id)
AA722777 heart KDM3A.c 7219 to 7611 397 to 5       393/397
(98 %)
0 diff
(100 %id)
AI015399   KDM3A.c 7223 to 7611 390 to 3       388/390
(99 %)
0 diff
(100 %id)
AA480252 colon KDM3A.c 7225 to 7610 401 to 16   AAA   386/386
(100 %)
0 diff
(100 %id)
AA809749 germinal center B cell KDM3A.c 7226 to 7610 402 to 18   AAA   385/385
(100 %)
2 diff
(99.5 %id)
AI824355 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors KDM3A.c 7236 to 7611 381 to 5       377/381
(98 %)
0 diff
(100 %id)
AI911797 colon KDM3A.c 7236 to 7610 389 to 15   AAA   375/375
(100 %)
0 diff
(100 %id)
AI344702 2 pooled tumors (clear cell type), Kidney KDM3A.c 7241 to 7611 373 to 3       371/373
(99 %)
0 diff
(100 %id)
AI371780 brain, glioblastoma (pooled) KDM3A.c 7241 to 7624 384 to 1       384/384
(100 %)
2 diff
(99.5 %id)
AI678361 poorly differentiated adenocarcinoma withsignet ring cell features, stomach KDM3A.c 7256 to 7611 356 to 1       356/356
(100 %)
1 diff
(99.8 %id)
AA516278 colon KDM3A.c 7263 to 7609 350 to 4       347/358
(96 %)
0 diff
(100 %id)
AI143634 heart KDM3A.c 7263 to 7611 349 to 1       349/349
(100 %)
0 diff
(100 %id)
AI767010 2 pooled tumors (clear cell type), Kidney KDM3A.c 7264 to 7418 1 to 155     Submitted on the opposite strand 155/155
(100 %)
2 diff
(98.8 %id)
AI468106 brain, glioblastoma (pooled) KDM3A.c 7278 to 7607 330 to 1       330/330
(100 %)
0 diff
(100 %id)
AA484152 Kidney KDM3A.c 7292 to 7611 319 to 1       319/327
(97 %)
1 diff
(99.7 %id)
AA665731   KDM3A.c 7309 to 7552 243 to 1       243/243
(100 %)
1 diff
(99.6 %id)
AA055692 heart KDM3A.c 7313 to 7611 301 to 2       300/301
(99 %)
0 diff
(100 %id)
BE041732 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors KDM3A.c 7329 to 7611 288 to 1       288/292
(98 %)
8 diff
(97.3 %id)
AI553718 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors KDM3A.c 7332 to 7611 283 to 4       280/286
(97 %)
0 diff
(100 %id)
AA962480 2 pooled tumors (clear cell type), Kidney KDM3A.c 7351 to 7610 260 to 1       260/260
(100 %)
1 diff
(99.7 %id)
BQ377753 uterus KDM3A.c 7354 to 7518 176 to 14       163/183
(89 %)
0 diff
(100 %id)
T10834   KDM3A.c 7362 to 7584 223 to 1       223/223
(100 %)
1 diff
(99.6 %id)
AW511889 Kidney, renal cell tumor KDM3A.c 7390 to 7610 221 to 1       221/221
(100 %)
0 diff
(100 %id)
AA778278 uterus KDM3A.c 7391 to 7606 216 to 1       216/216
(100 %)
0 diff
(100 %id)
FN137332 breast carcinoma KDM3A.c 7412 to 7479 69 to 1     Submitted on the opposite strand 69/72
(95 %)
1 diff
(98.7 %id)
AI219614 placenta KDM3A.c 7422 to 7611 191 to 2       190/191
(99 %)
0 diff
(100 %id)
W57561 heart KDM3A.c 7431 to 7610 181 to 1       181/187
(96 %)
2 diff
(99.0 %id)
BQ435521 testis KDM3A.c 7513 to 8220 1 to 716       716/789
(90 %)
9 diff
(98.9 %id)
BQ229232 melanotic melanoma, skin KDM3A.c 7522 to 7607 1 to 86   AAA   86/86
(100 %)
0 diff
(100 %id)
TI_43963496   KDM3A.c 7965 to 8841 33 to 907       875/911
(96 %)
14 diff
(98.5 %id)
BI520074 brain, medulla KDM3A.c 7966 to 8841 1 to 874       874/878
(99 %)
14 diff
(98.5 %id)
AK125045 thalamus KDM3A.d 1 to 2954 2 to 2955 exact tiling clone, available from FLJ,   2955/2955
(100 %)
2 diff
(100.0 %id)
BX537674 human esophagus tumor KDM3A.e 1 to 4484 1 to 4484 exact tiling clone, available from DKFZ, AAA   4484/4484
(100 %)
5 diff
(99.9 %id)
DA288888 hippocampus KDM3A.e 215 to 786 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA403119 thalamus KDM3A.e 768 to 1320 2 to 554   tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
DB081924 testis KDM3A.e 990 to 1258 237 to 505   capped   269/504
(53 %)
0 diff
(100 %id)
TI_57178612   KDM3A.e 1295 to 2171 66 to 951       886/957
(92 %)
22 diff
(97.8 %id)
BI768446 pooled lung and spleen KDM3A.e 1296 to 2171 1 to 885       885/891
(99 %)
22 diff
(97.6 %id)
R54233 whole brain KDM3A.e 2484 to 2910 1 to 440       440/454
(96 %)
19 diff
(95.9 %id)
H17278 whole brain KDM3A.e 2484 to 2910 1 to 430       430/449
(95 %)
8 diff
(98.3 %id)
TI_149313031   KDM3A.e 2795 to 3520 781 to 68   tiling clone,   714/981
(72 %)
16 diff
(98.4 %id)
CF541091 lung KDM3A.e 2956 to 3498 561 to 19   AAA   543/543
(100 %)
4 diff
(99.3 %id)
BF852606 lung_normal KDM3A.e 3472 to 3671 203 to 5     Submitted on the opposite strand 199/239
(83 %)
0 diff
(100 %id)
DB312252 thalamus KDM3A.e 3919 to 4484 566 to 1   tiling clone,   566/566
(100 %)
0 diff
(100 %id)
DB307552 hippocampus KDM3A.e 3923 to 4484 562 to 1       562/562
(100 %)
1 diff
(99.9 %id)
H17279 whole brain KDM3A.e 4060 to 4485 443 to 8       436/449
(97 %)
0 diff
(100 %id)
R51839 whole brain KDM3A.e 4184 to 4485 312 to 8       305/314
(97 %)
0 diff
(100 %id)
N53800 multiple sclerosis lesions KDM3A.f 1 to 448 1 to 450 F5X A6T T140X I141N K142* tiling clone,   450/452
(99 %)
8 diff
(98.3 %id)
AW402213 lymph KDM3A.g 1 to 456 1 to 454   tiling clone,   454/454
(100 %)
9 diff
(98.1 %id)
TI_154138533   KDM3A.g 8 to 515 82 to 587 Y48C A49C A50K K51G D52H ... tiling clone,   506/511
(99 %)
8 diff
(98.5 %id)
AA283441   KDM3A.h-u 1 to 136 136 to 1   tiling clone,   136/136
(100 %)
2 diff
(98.6 %id)
BG896300 cartilage KDM3A.h-u 532 to 841 87 to 396 exact tiling clone,   310/327
(94 %)
0 diff
(100 %id)
AW074853 pooled KDM3A.h-u 682 to 1131 470 to 21   AAA   450/450
(100 %)
6 diff
(98.7 %id)
AW074843 pooled KDM3A.h-u 736 to 1131 416 to 21   AAA   396/396
(100 %)
6 diff
(98.5 %id)
AA806742 germinal center B cell KDM3A.h-u 789 to 1131 374 to 32   tiling clone, AAA   343/343
(100 %)
1 diff
(99.8 %id)
AL698670 human skeletal muscle KDM3A.i-u 1 to 713 1 to 713 exact tiling clone,   713/713
(100 %)
1 diff
(99.9 %id)
AW898577 nervous_normal KDM3A.i-u 453 to 997 9 to 555   tiling clone,   547/555
(98 %)
0 diff
(100 %id)
AL705658 human skeletal muscle KDM3A.j-u 1 to 420 1 to 420 exact tiling clone,   420/420
(100 %)
0 diff
(100 %id)
FN099904 breast carcinoma KDM3A.k-u 1 to 57 1 to 57 exact tiling clone,   57/58
(98 %)
4 diff
(93.2 %id)
DB278548 uterus Gene KDM3A, variant not shown       capped This clone was ignored    
DB352334 uterus Gene KDM3A, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u, .j-u, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI