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Gene TAOK3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
434 supporting clones for gene TAOK3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB165555 thymus .a 1 to 593 2 to 595   tiling clone, capped   594/594
(100 %)
1 diff
(99.9 %id)
DA396122 thalamus .a 15 to 598 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA993714 synovial membrane tissue from rheumatioidarthritis .a 16 to 551 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DB136050 thymus .a 16 to 496 2 to 482   capped   481/481
(100 %)
2 diff
(99.6 %id)
DA961335 Spleen .a 21 to 594 2 to 578   capped   577/578
(99 %)
4 diff
(99.4 %id)
DA815383   .a 28 to 599 2 to 573   capped   572/578
(98 %)
3 diff
(99.5 %id)
BG388216 embryonal carcinoma, cell line, testis .a 44 to 624 1 to 585       585/903
(64 %)
14 diff
(98.5 %id)
BG389664 embryonal carcinoma, cell line, testis .a 81 to 799 1 to 720       718/752
(95 %)
9 diff
(98.9 %id)
AF135158   .a 113 to 3126 1 to 3014 exact tiling clone, AAA Possibly primed on the genome, locally A rich (22/23 A in genome downstream of last aligned base) 3014/3014
(100 %)
0 diff
(100 %id)
AW408167 lymph .a 139 to 660 8 to 529       522/529
(98 %)
4 diff
(99.3 %id)
TI_154147559   .a 139 to 758 81 to 704       624/848
(73 %)
25 diff
(97.1 %id)
NM_016281.3   .b 1 to 4382 2 to 4383 exact RefSeq, AAA   4383/4383
(100 %)
0 diff
(100 %id)
DB066061 testis .b 1 to 547 2 to 548   tiling clone, capped   547/547
(100 %)
1 diff
(99.9 %id)
DA501873 brain .b 17 to 589 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB094418 testis .b 20 to 575 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA634885 Kidney .b 30 to 454 2 to 425   capped   424/424
(100 %)
2 diff
(99.6 %id)
DB245324 uterus, tumor tissue .b 30 to 595 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA937023 Spleen .b 37 to 601 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB466385 hippocampus .b 38 to 306 1 to 269       269/435
(61 %)
10 diff
(97.8 %id)
DB469442 hippocampus .b 38 to 290 1 to 254       254/346
(73 %)
8 diff
(97.7 %id)
DA223804 brain .b 39 to 608 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA237834 brain .b 39 to 610 2 to 573   capped   572/575
(99 %)
1 diff
(99.9 %id)
DA499157 brain .b 39 to 552 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
DA589899 lung .b 39 to 596 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA943516 Spleen .b 39 to 622 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA956842 Spleen .b 39 to 587 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DB093380 testis .b 39 to 595 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DW447686 Liver .b 42 to 243 11 to 211       201/211
(95 %)
0 diff
(100 %id)
BP278553   .b 47 to 628 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BJ992063 hepatoblastoma .b 52 to 484 1 to 434       434/434
(100 %)
1 diff
(99.8 %id)
BP359742 mammary gland .b 52 to 635 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DA524404 brain .b 53 to 611 2 to 560   capped   559/567
(98 %)
1 diff
(99.9 %id)
AA053564 colon, tumor .b 53 to 296 1 to 242       242/404
(59 %)
4 diff
(99.1 %id)
DB037588 testis .b 53 to 622 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DB061420 testis .b 53 to 610 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB068093 testis .b 53 to 589 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
BU655931 blood .b 54 to 508 1 to 455       455/455
(100 %)
1 diff
(99.8 %id)
DB065439 testis .b 54 to 587 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
AK289558 cerebellum .b 56 to 3209 1 to 3154 S47N F250S G345S E509G     3154/3154
(100 %)
4 diff
(99.9 %id)
BP287232 lung .b 56 to 637 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA116698 cerebellum .b 57 to 653 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
DA123059 cerebellum .b 57 to 611 2 to 557   capped   556/564
(98 %)
1 diff
(99.9 %id)
DA378514 thalamus .b 57 to 628 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CN301088 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 59 to 511 1 to 453       453/453
(100 %)
2 diff
(99.6 %id)
DA167744 amygdala .b 60 to 625 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA926416 small intestine .b 60 to 642 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BU154489 eye, retinoblastoma .b 64 to 832 5 to 775       771/945
(81 %)
15 diff
(98.5 %id)
AW978526   .b 69 to 786 7 to 724       718/744
(96 %)
11 diff
(98.6 %id)
AW978528   .b 69 to 741 7 to 686       674/686
(98 %)
13 diff
(98.2 %id)
AI340133 adenocarcinoma, colon .b 69 to 547 1 to 479     Submitted on the opposite strand 479/479
(100 %)
0 diff
(100 %id)
AW236509 pooled germ cell tumors .b 69 to 318 1 to 250     Submitted on the opposite strand 250/250
(100 %)
0 diff
(100 %id)
BF516165   .b 70 to 514 1 to 445     Submitted on the opposite strand 445/445
(100 %)
0 diff
(100 %id)
BE734506 choriocarcinoma, placenta .b 82 to 801 33 to 756       724/756
(95 %)
16 diff
(97.9 %id)
BC002756 Placenta, choriocarcinoma .b 89 to 3209 1 to 3121 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (22/23 A in genome downstream of last aligned base) 3121/3121
(100 %)
0 diff
(100 %id)
BI553306 brain, hippocampus .b 96 to 164 1 to 69       69/69
(100 %)
3 diff
(95.7 %id)
AI970300 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 115 to 306 1 to 191     Submitted on the opposite strand 191/203
(94 %)
6 diff
(97.1 %id)
DA626259 Kidney .b 115 to 661 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
AF181985   .b 199 to 4382 1 to 4163 S47N AAA   4163/4163
(100 %)
19 diff
(99.6 %id)
AA831203 germinal center B cell .b 271 to 529 131 to 389     Submitted on the opposite strand 259/389
(66 %)
0 diff
(100 %id)
CU454387 epidermis .b 274 to 940 45 to 712       668/713
(93 %)
3 diff
(99.6 %id)
BP285708 lung .b 296 to 737 140 to 581       443/581
(76 %)
3 diff
(99.5 %id)
AF179867   .b 303 to 3200 14 to 2911 S356T T357W G358N S359Q Q360P ... AAA   2842/2920
(97 %)
14 diff
(99.6 %id)
CD627738   .b 307 to 932 1 to 626       626/626
(100 %)
0 diff
(100 %id)
DA816180   .b 307 to 871 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
CF138651 lymph .b 403 to 588 1 to 185   AAA   185/185
(100 %)
5 diff
(97.3 %id)
BP241385 Liver .b 434 to 986 1 to 553       553/558
(99 %)
4 diff
(99.3 %id)
FN070339 breast carcinoma .b 442 to 532 94 to 1     Submitted on the opposite strand 94/99
(94 %)
5 diff
(95.0 %id)
DN989896 brain, whole brain .b 461 to 1182 8 to 726       719/726
(99 %)
3 diff
(99.6 %id)
TI_1948150900   .b 490 to 1225 128 to 865       738/1338
(55 %)
26 diff
(98.1 %id)
TI_1948150901   .b 490 to 1103 118 to 732       615/1036
(59 %)
8 diff
(99.3 %id)
AF263311   .b 491 to 3184 1 to 2694       2694/2694
(100 %)
7 diff
(99.8 %id)
BT007185   .b 491 to 3185 1 to 2695       2695/2697
(99 %)
1 diff
(100.0 %id)
BP284511 bone marrow .b 491 to 1084 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
BP218074 caudate nucleus .b 495 to 1070 1 to 577       575/583
(98 %)
8 diff
(98.7 %id)
BP315453 mammary gland .b 532 to 1111 1 to 581       581/581
(100 %)
6 diff
(99.0 %id)
BU155179 melanotic melanoma, skin .b 533 to 1310 1 to 781       781/835
(93 %)
6 diff
(99.3 %id)
BG954089 colon .b 538 to 662 1 to 124       124/124
(100 %)
7 diff
(94.4 %id)
DA162113 amygdala .b 543 to 1112 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BF507360   .b 571 to 1089 15 to 533     Submitted on the opposite strand 519/519
(100 %)
3 diff
(99.5 %id)
BX096671 melanocyte .b 668 to 1396 729 to 1     Submitted on the opposite strand 729/730
(99 %)
0 diff
(100 %id)
BG341186 B-cells, primary B-cells from tonsils (cell line) .b 668 to 1278 1 to 607       607/607
(100 %)
9 diff
(98.6 %id)
TI_154105259   .b 709 to 1407 785 to 86   AAA   700/702
(99 %)
4 diff
(99.5 %id)
BP224415 colon mucosa .b 714 to 1235 1 to 523       523/557
(93 %)
13 diff
(97.7 %id)
BP224424 colon mucosa .b 714 to 1235 1 to 523       523/655
(79 %)
9 diff
(98.7 %id)
BP224430 colon mucosa .b 714 to 1386 1 to 677       677/679
(99 %)
10 diff
(98.6 %id)
CA446533 Chondrosarcoma, Left Pubic Bone .b 729 to 1407 698 to 19   AAA   680/680
(100 %)
1 diff
(99.9 %id)
BM013745 breast, mammary adenocarcinoma, cell line .b 751 to 1400 1 to 656       655/772
(84 %)
23 diff
(97.1 %id)
TI_59391671   .b 751 to 1400 89 to 744       655/772
(84 %)
23 diff
(97.1 %id)
AA885355 pooled .b 763 to 1380 616 to 1       614/616
(99 %)
6 diff
(99.1 %id)
BG292187 bladder, transitional cell papilloma, cell line .b 808 to 1604 1 to 801       801/876
(91 %)
29 diff
(96.7 %id)
CB115356 Liver .b 916 to 1133 1 to 218       218/218
(100 %)
2 diff
(99.1 %id)
CB121394 Liver .b 916 to 1464 1 to 549       549/549
(100 %)
2 diff
(99.7 %id)
AI739203 colon, colon tumor, RER+ .b 934 to 1406 472 to 1       472/472
(100 %)
18 diff
(96.2 %id)
AI537418 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 944 to 1407 465 to 1       464/465
(99 %)
18 diff
(96.2 %id)
CD685098 normal nasopharynx .b 959 to 1406 22 to 469       448/469
(95 %)
2 diff
(99.6 %id)
BF958690 nervous_normal .b 964 to 1289 401 to 76       326/403
(80 %)
1 diff
(99.8 %id)
BQ422459 melanotic melanoma, skin .b 973 to 1407 1 to 435       435/1005
(43 %)
10 diff
(99.1 %id)
AA053510 colon, tumor .b 986 to 1380 394 to 1       394/394
(100 %)
5 diff
(98.8 %id)
AW263128 pooled .b 989 to 1406 418 to 1       418/418
(100 %)
0 diff
(100 %id)
N40091 melanocyte .b 992 to 1397 410 to 2     Submitted on the opposite strand 405/410
(98 %)
1 diff
(99.8 %id)
EC572275 Prostate .b 1005 to 1089 19 to 102       84/102
(82 %)
0 diff
(100 %id)
AA917424 pooled .b 1015 to 1408 393 to 1       393/393
(100 %)
6 diff
(98.5 %id)
CD627739   .b 1031 to 1758 728 to 1       728/728
(100 %)
0 diff
(100 %id)
AL833731 stomach .b 1059 to 3209 1 to 2151   available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 2151/2152
(99 %)
1 diff
(100.0 %id)
BM751456 Ascites, stomach .b 1063 to 1219 1 to 157       157/157
(100 %)
1 diff
(99.4 %id)
CB152198 brain .b 1068 to 1678 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BP279480   .b 1068 to 1645 1 to 583       583/583
(100 %)
8 diff
(98.7 %id)
DA027761   .b 1076 to 1640 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BQ228691 melanotic melanoma, skin .b 1138 to 2029 1 to 899       899/902
(99 %)
13 diff
(98.6 %id)
DA300270 hippocampus .b 1165 to 1741 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
CB135835 Liver .b 1218 to 1703 1 to 486       486/486
(100 %)
1 diff
(99.8 %id)
AU185409 skin .b 1230 to 1405 176 to 1       176/176
(100 %)
0 diff
(100 %id)
BQ350548 head_neck .b 1277 to 1476 1 to 200       200/207
(96 %)
20 diff
(90.4 %id)
DA476567   .b 1306 to 1877 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
GD155079   .b 1310 to 1407 1 to 100   AAA   100/100
(100 %)
5 diff
(95.0 %id)
GD155744   .b 1310 to 1407 1 to 98   AAA   98/98
(100 %)
3 diff
(97.0 %id)
BQ719799 dorsal root ganglia .b 1326 to 2186 1 to 862       862/935
(92 %)
7 diff
(99.3 %id)
BG960065 colon .b 1340 to 1651 1 to 312       312/313
(99 %)
5 diff
(98.5 %id)
AF328731 cutaneous lymphoma .b 1399 to 3209 1 to 1811   AAA Possibly primed on the genome, locally A rich (22/23 A in genome downstream of last aligned base) 1811/1811
(100 %)
1 diff
(100.0 %id)
BM800913 melanotic melanoma, skin .b 1423 to 2186 1 to 772       772/1109
(69 %)
16 diff
(98.6 %id)
TI_227714585   .b 1429 to 2355 993 to 72       922/1099
(83 %)
22 diff
(98.0 %id)
CU455481 epidermis .b 1454 to 2110 14 to 669       656/669
(98 %)
0 diff
(100 %id)
AA151745 colon, tumor .b 1483 to 1702 1 to 220       220/222
(99 %)
1 diff
(99.6 %id)
BF814875 colon_ins .b 1486 to 1753 1 to 268       268/268
(100 %)
8 diff
(97.1 %id)
TI_227714318   .b 1493 to 2340 932 to 87   AAA   846/958
(88 %)
9 diff
(99.1 %id)
BF895868 marrow .b 1507 to 1877 1 to 371       371/371
(100 %)
4 diff
(99.0 %id)
BF370846 prostate_normal .b 1523 to 1779 21 to 274       254/274
(92 %)
6 diff
(97.9 %id)
AW608223 leiomios .b 1574 to 1833 13 to 272       260/272
(95 %)
1 diff
(99.7 %id)
FN158538 breast carcinoma .b 1577 to 1662 1 to 85       85/85
(100 %)
1 diff
(98.9 %id)
CD365021 Alveolar Macrophage, lung .b 1584 to 2340 775 to 19   AAA   757/757
(100 %)
0 diff
(100 %id)
CA388830 eye, RPE/choroid .b 1633 to 2049 1 to 417       417/417
(100 %)
0 diff
(100 %id)
BE563666 adenocarcinoma, Pancreas .b 1662 to 2172 1 to 513       513/910
(56 %)
11 diff
(98.8 %id)
DA151438 amygdala .b 1676 to 2237 2 to 566   capped   565/565
(100 %)
4 diff
(99.3 %id)
DA843009 placenta .b 1676 to 2256 2 to 585   capped   584/584
(100 %)
3 diff
(99.5 %id)
TI_154089602   .b 1683 to 2189 692 to 175   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 518/1224
(42 %)
26 diff
(97.9 %id)
BM046406 carcinoma, cell line, Prostate .b 1687 to 2345 1 to 674       672/1081
(62 %)
24 diff
(97.8 %id)
BM450934 eye, retinoblastoma .b 1693 to 2507 13 to 839       827/909
(90 %)
17 diff
(98.2 %id)
BP294572 Liver .b 1694 to 2268 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
BG740412 skin .b 1713 to 2574 1 to 867       865/871
(99 %)
17 diff
(98.1 %id)
AW373447 breast .b 1714 to 1903 189 to 1       189/197
(95 %)
4 diff
(98.0 %id)
CD108145 brain, Pituitary .b 1718 to 2565 1 to 853       853/861
(99 %)
8 diff
(99.1 %id)
CD365250 Alveolar Macrophage, lung .b 1719 to 2355 639 to 2       638/640
(99 %)
1 diff
(99.9 %id)
AF161373 blood .b 1742 to 3209 1 to 1473   AAA Possibly primed on the genome, locally A rich (22/23 A in genome downstream of last aligned base) 1473/1473
(100 %)
21 diff
(98.6 %id)
AA825637 germinal center B cell .b 1742 to 2177 439 to 4       436/439
(99 %)
0 diff
(100 %id)
CN353341 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1782 to 2142 1 to 361       361/361
(100 %)
5 diff
(98.7 %id)
BF964878 muscle (skeletal) .b 1812 to 2533 1 to 713       713/901
(79 %)
26 diff
(97.2 %id)
BF748458 breast_normal .b 1814 to 2318 38 to 542       507/542
(93 %)
0 diff
(100 %id)
BP262627 small intestine .b 1820 to 2399 1 to 580       580/584
(99 %)
11 diff
(98.2 %id)
AI357099 lymph node, lymphoma, follicular mixed small and largecell .b 1829 to 2182 360 to 7   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 354/360
(98 %)
1 diff
(99.8 %id)
AW674211   .b 1863 to 2171 309 to 1       309/337
(91 %)
22 diff
(93.5 %id)
CB530054 Aveolar Macrophage, lung .b 1866 to 2189 324 to 1       324/324
(100 %)
5 diff
(98.5 %id)
BP329140 rectum .b 1870 to 2450 1 to 581       581/581
(100 %)
15 diff
(97.5 %id)
GD157107   .b 1985 to 2181 1 to 199   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 199/199
(100 %)
20 diff
(90.0 %id)
GD140178   .b 1988 to 2177 1 to 190   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 190/194
(97 %)
8 diff
(95.9 %id)
DR977703 brain .b 1988 to 2167 1 to 179   AAA Submitted on the opposite strand 179/179
(100 %)
3 diff
(98.4 %id)
AW902828 nervous_normal .b 1989 to 2342 360 to 7       354/360
(98 %)
0 diff
(100 %id)
DR980362 placenta .b 1992 to 2167 1 to 175   AAA Submitted on the opposite strand 175/175
(100 %)
7 diff
(96.0 %id)
GD157718   .b 1995 to 2177 9 to 191   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 183/195
(93 %)
2 diff
(99.0 %id)
BE336708 Kidney, renal cell adenocarcinoma .b 2009 to 2677 1 to 669       669/669
(100 %)
2 diff
(99.8 %id)
AW732326 Kidney, renal cell adenocarcinoma .b 2017 to 2630 1 to 615       615/617
(99 %)
5 diff
(99.2 %id)
AW752477 colon .b 2095 to 2751 657 to 4       654/657
(99 %)
19 diff
(97.2 %id)
BG979395 colon_normal .b 2104 to 2509 424 to 9       416/428
(97 %)
25 diff
(94.2 %id)
AW752480 colon .b 2113 to 2741 648 to 19       630/648
(97 %)
2 diff
(99.7 %id)
AW752471 colon .b 2134 to 2741 615 to 7       609/615
(99 %)
0 diff
(100 %id)
FN068546 breast carcinoma .b 2140 to 2245 107 to 1     Submitted on the opposite strand 107/108
(99 %)
2 diff
(98.2 %id)
CD640750 pooled .b 2195 to 2872 1 to 675       677/675
(100 %)
13 diff
(98.1 %id)
DA881503   .b 2203 to 2750 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
AI907261 breast .b 2223 to 2774 1 to 545       545/556
(98 %)
19 diff
(96.6 %id)
BQ549117 insulinoma, Pancreas .b 2230 to 2793 16 to 579       562/583
(96 %)
8 diff
(98.7 %id)
BM794796 Ascites, stomach .b 2237 to 2894 1 to 658       658/658
(100 %)
0 diff
(100 %id)
BF735302 amnion_normal .b 2247 to 2627 395 to 13     Submitted on the opposite strand 383/395
(96 %)
0 diff
(100 %id)
CD702790 normal nasopharynx .b 2247 to 2828 22 to 603       582/603
(96 %)
2 diff
(99.7 %id)
BI791826 Pancreas, Purified pancreatic islet .b 2282 to 2873 8 to 599   fully sequenced,   592/599
(98 %)
2 diff
(99.7 %id)
AA389748   .b 2292 to 2456 1 to 165       165/165
(100 %)
9 diff
(94.6 %id)
BF351442 head_neck .b 2305 to 2739 1 to 436       436/438
(99 %)
13 diff
(97.1 %id)
BE167954 head_neck .b 2313 to 2756 1 to 445       445/445
(100 %)
9 diff
(98.0 %id)
CU449348 epidermis .b 2322 to 2952 642 to 12     Submitted on the opposite strand 631/642
(98 %)
0 diff
(100 %id)
BG686942 B-cells, primary B-cells from tonsils (cell line) .b 2345 to 3152 1 to 808       808/808
(100 %)
1 diff
(99.9 %id)
CU445506 epidermis .b 2359 to 2952 605 to 12     Submitted on the opposite strand 594/605
(98 %)
3 diff
(99.6 %id)
CR998356 T-Lymphocytes .b 2366 to 3168 1 to 804       804/806
(99 %)
3 diff
(99.7 %id)
BF813365 colon_ins .b 2380 to 2743 420 to 60     Submitted on the opposite strand 361/428
(84 %)
6 diff
(98.6 %id)
BF814463 colon_ins .b 2380 to 2743 420 to 60     Submitted on the opposite strand 361/428
(84 %)
6 diff
(98.6 %id)
AW796664 uterus .b 2388 to 2768 389 to 8       382/395
(96 %)
2 diff
(99.5 %id)
TI_1948150902   .b 2388 to 3197 924 to 117       808/1271
(63 %)
8 diff
(99.4 %id)
TI_154136952   .b 2389 to 3227 926 to 78       849/1174
(72 %)
41 diff
(96.6 %id)
TI_1948150903   .b 2465 to 3186 861 to 137       725/1392
(52 %)
28 diff
(98.0 %id)
AA188109   .b 2509 to 2834 1 to 325       325/475
(68 %)
1 diff
(99.8 %id)
TI_154162148   .b 2514 to 3209 803 to 112   AAA Submitted on the opposite strand 692/692
(100 %)
16 diff
(97.7 %id)
BE700136 nervous_normal .b 2517 to 2686 1 to 178       178/180
(98 %)
21 diff
(88.4 %id)
BQ018678 lung, Metastatic Chondrosarcoma .b 2519 to 3225 706 to 1       706/710
(99 %)
1 diff
(99.9 %id)
CA866599 Pancreas, Purified pancreatic islet .b 2527 to 2873 1 to 347   fully sequenced,   347/347
(100 %)
1 diff
(99.8 %id)
FN056015 breast carcinoma .b 2539 to 2644 106 to 1     Submitted on the opposite strand 106/106
(100 %)
0 diff
(100 %id)
BG151552 sciatic nerve .b 2564 to 3213 647 to 1       647/647
(100 %)
4 diff
(99.4 %id)
R90907 brain .b 2607 to 2862 1 to 257       257/257
(100 %)
3 diff
(98.9 %id)
AW276552 lung, two pooled squamous cell carcinomas .b 2631 to 3210 580 to 1       580/593
(97 %)
7 diff
(98.9 %id)
TI_154091093   .b 2631 to 3231 671 to 70       602/965
(62 %)
14 diff
(98.6 %id)
CA434316 lung, Metastatic Chondrosarcoma .b 2659 to 3225 568 to 1       568/568
(100 %)
12 diff
(97.9 %id)
BE542662 cervix .b 2683 to 3231 1 to 551       551/838
(65 %)
11 diff
(98.7 %id)
BJ992064 hepatoblastoma .b 2687 to 3173 487 to 1       487/487
(100 %)
0 diff
(100 %id)
DA134259 alzheimer cortex .b 2693 to 3243 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
W28742 eye, retina .b 2696 to 3197 548 to 47       502/640
(78 %)
7 diff
(99.0 %id)
W27270 eye, retina .b 2698 to 3217 8 to 533       526/552
(95 %)
16 diff
(97.2 %id)
CA388829 eye, RPE/choroid .b 2702 to 3228 527 to 1       527/527
(100 %)
0 diff
(100 %id)
BF873678 lung_tumor .b 2714 to 2952 392 to 154     Submitted on the opposite strand 239/394
(60 %)
0 diff
(100 %id)
AI554257 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 2718 to 3212 495 to 1       495/495
(100 %)
0 diff
(100 %id)
AW505490 lymph .b 2718 to 3209 530 to 39   AAA Submitted on the opposite strand 492/492
(100 %)
1 diff
(99.8 %id)
CU443486 epidermis .b 2724 to 3439 726 to 9     Submitted on the opposite strand 718/746
(96 %)
6 diff
(99.2 %id)
CU447012 epidermis .b 2724 to 3439 728 to 10     Submitted on the opposite strand 719/729
(98 %)
10 diff
(98.7 %id)
CU454480 epidermis .b 2724 to 3439 17 to 733       717/741
(96 %)
3 diff
(99.6 %id)
BE206178 Kidney, renal cell adenocarcinoma .b 2726 to 3216 491 to 1       491/491
(100 %)
2 diff
(99.6 %id)
CU454202 epidermis .b 2735 to 3439 715 to 10     Submitted on the opposite strand 706/746
(94 %)
2 diff
(99.8 %id)
AW840755 colon_normal .b 2736 to 3034 341 to 41       301/341
(88 %)
0 diff
(100 %id)
CN353342 embryonic stem cells, cell lines H1, H7, andH9 .b 2750 to 3233 507 to 23     Submitted on the opposite strand 485/510
(95 %)
5 diff
(99.1 %id)
AW391446 stomach .b 2754 to 2953 237 to 39       199/239
(83 %)
4 diff
(98.4 %id)
DB528425 hippocampus .b 2765 to 3209 1 to 443     Submitted on the opposite strand 443/444
(99 %)
2 diff
(99.6 %id)
DB537007 hippocampus .b 2777 to 3209 1 to 434     Submitted on the opposite strand 434/435
(99 %)
6 diff
(98.7 %id)
DB530379 hippocampus .b 2778 to 3209 1 to 418     Submitted on the opposite strand 418/419
(99 %)
20 diff
(95.3 %id)
BI713587 Pancreas, Purified pancreatic islet .b 2812 to 3210 399 to 1   fully sequenced,   399/399
(100 %)
3 diff
(99.3 %id)
CA866863 Pancreas, Purified pancreatic islet .b 2812 to 3208 397 to 1   fully sequenced,   397/397
(100 %)
0 diff
(100 %id)
BG251838 adenocarcinoma, cell line, Liver .b 2826 to 3209 1 to 383   AAA Possibly primed on the genome, locally A rich (22/23 A in genome downstream of last aligned base) 383/383
(100 %)
3 diff
(99.3 %id)
AA187981   .b 2836 to 3178 342 to 1       342/571
(59 %)
5 diff
(99.2 %id)
EC473612 Prostate .b 2871 to 2959 10 to 99       90/99
(90 %)
6 diff
(94.0 %id)
BU607422 Human Lung Epithelial cells, lung .b 2925 to 3695 787 to 16   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 772/772
(100 %)
1 diff
(99.9 %id)
BG716602 brain, hypothalamus .b 2959 to 3663 1 to 738       738/848
(87 %)
64 diff
(92.5 %id)
BI458229 brain, hypothalamus .b 2959 to 3664 1 to 716       716/741
(96 %)
45 diff
(94.0 %id)
BF229561 colon_est .b 3024 to 3181 163 to 7       157/169
(92 %)
0 diff
(100 %id)
AI700169 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3026 to 3212 187 to 1       187/187
(100 %)
2 diff
(99.0 %id)
AW629143 pooled .b 3026 to 3179 154 to 1       154/154
(100 %)
0 diff
(100 %id)
BF057873 brain, oligodendroglioma .b 3138 to 3194 1 to 57       57/57
(100 %)
0 diff
(100 %id)
EC515507 Prostate .b 3153 to 3210 1 to 58       58/58
(100 %)
0 diff
(100 %id)
BG986379 head_neck .b 3173 to 3380 210 to 5       206/210
(98 %)
0 diff
(100 %id)
H82465 melanocyte .b 3185 to 3587 1 to 410       410/452
(90 %)
12 diff
(97.4 %id)
BF845072 head_neck .b 3189 to 3328 140 to 3     Submitted on the opposite strand 138/148
(93 %)
0 diff
(100 %id)
AI084100 anaplastic oligodendroglioma, brain .b 3195 to 3505 1 to 310     Submitted on the opposite strand 310/310
(100 %)
1 diff
(99.7 %id)
BU179555 large cell carcinoma, lung .b 3206 to 4060 1 to 866   tiling clone,   866/903
(95 %)
8 diff
(99.2 %id)
BP226887   .b 3222 to 3804 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BF910601 uterus_tumor .b 3229 to 3352 131 to 7     Submitted on the opposite strand 125/131
(95 %)
0 diff
(100 %id)
FN152125 breast carcinoma .b 3244 to 3300 1 to 56       56/56
(100 %)
1 diff
(98.3 %id)
W56511 heart .b 3249 to 3686 1 to 440       440/440
(100 %)
2 diff
(99.6 %id)
BF095695 uterus_tumor .b 3322 to 3743 1 to 423       423/423
(100 %)
16 diff
(96.3 %id)
TI_57240814   .b 3323 to 4170 28 to 873       846/875
(96 %)
12 diff
(98.7 %id)
BI914675 brain .b 3324 to 4170 1 to 845       845/847
(99 %)
12 diff
(98.6 %id)
W00535 melanocyte .b 3365 to 3785 1 to 422       422/422
(100 %)
1 diff
(99.8 %id)
AA148569 uterus .b 3414 to 3787 1 to 374     Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 374/374
(100 %)
2 diff
(99.5 %id)
AV715281   .b 3428 to 3861 1 to 440       440/516
(85 %)
27 diff
(94.8 %id)
BG430671 Kidney .b 3430 to 4128 1 to 708       708/835
(84 %)
42 diff
(95.0 %id)
TI_154091544   .b 3433 to 4253 912 to 102   AAA   811/933
(86 %)
12 diff
(98.8 %id)
AA259106 germinal center B cell .b 3480 to 3908 11 to 439       439/439
(100 %)
1 diff
(99.8 %id)
BQ373651 prostate_tumor .b 3484 to 3635 169 to 14       156/169
(92 %)
13 diff
(92.4 %id)
CA434405 lung, Metastatic Chondrosarcoma .b 3492 to 4253 778 to 19   AAA   760/769
(98 %)
4 diff
(99.5 %id)
BF679481 Prostate .b 3501 to 4159 1 to 650       650/836
(77 %)
22 diff
(97.4 %id)
BE834294 ovary .b 3575 to 3756 201 to 20       182/216
(84 %)
0 diff
(100 %id)
FN131922 breast carcinoma .b 3592 to 3650 1 to 58       58/58
(100 %)
1 diff
(98.3 %id)
DA318661 hippocampus .b 3637 to 4203 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AA972234 carcinoid, lung .b 3676 to 3803 1 to 128     Submitted on the opposite strand 128/128
(100 %)
0 diff
(100 %id)
AA576724 colon, colon tumor RER+ .b 3677 to 4256 580 to 1       580/580
(100 %)
5 diff
(99.2 %id)
BQ015818 lung, Metastatic Chondrosarcoma .b 3685 to 4253 587 to 19   AAA   569/569
(100 %)
0 diff
(100 %id)
BQ011019 placenta .b 3696 to 4253 576 to 19   AAA   558/558
(100 %)
1 diff
(99.9 %id)
AI057643 parathyroid gland, parathyroid tumor .b 3707 to 4263 557 to 1   tiling clone,   557/557
(100 %)
0 diff
(100 %id)
AI568537 anaplastic oligodendroglioma, brain .b 3709 to 4255 547 to 1       547/547
(100 %)
2 diff
(99.7 %id)
BJ993367 hepatoblastoma .b 3738 to 4219 482 to 1       482/482
(100 %)
0 diff
(100 %id)
AA873296 2 pooled tumors (clear cell type), Kidney .b 3746 to 4253 520 to 13   AAA   508/508
(100 %)
0 diff
(100 %id)
AA345393 gall bladder .b 3755 to 3958 1 to 205       205/205
(100 %)
2 diff
(99.1 %id)
CB051328 Prostate .b 3766 to 3820 11 to 65       65/65
(100 %)
1 diff
(98.5 %id)
AI142833 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3774 to 4254 480 to 1       480/480
(100 %)
1 diff
(99.8 %id)
AI127845 uterus .b 3784 to 4253 469 to 1       469/469
(100 %)
4 diff
(99.2 %id)
BM717449 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 3786 to 4255 1 to 470   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 470/471
(99 %)
1 diff
(99.8 %id)
AW594123 pooled germ cell tumors .b 3794 to 4172 1 to 379     Submitted on the opposite strand 379/379
(100 %)
0 diff
(100 %id)
AI658631 Prostate .b 3797 to 4254 458 to 1       458/458
(100 %)
9 diff
(98.1 %id)
BM676193 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 3799 to 4253 473 to 19   AAA   455/462
(98 %)
2 diff
(99.6 %id)
FN053272 breast carcinoma .b 3811 to 3892 1 to 82       82/82
(100 %)
0 diff
(100 %id)
DB547494 hippocampus .b 3815 to 4253 1 to 439     Submitted on the opposite strand 439/439
(100 %)
1 diff
(99.8 %id)
AA780723   .b 3816 to 4261 446 to 1       446/446
(100 %)
0 diff
(100 %id)
AI086331 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3820 to 4256 435 to 1       435/435
(100 %)
3 diff
(99.4 %id)
AI638174 pooled germ cell tumors .b 3820 to 4253 458 to 25   AAA   434/434
(100 %)
9 diff
(98.0 %id)
BI493884 cochlea, ear .b 3820 to 4186 370 to 1       370/377
(98 %)
13 diff
(96.6 %id)
AI206353 placenta .b 3822 to 4253 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
AI912689 carcinoid, lung .b 3822 to 4253 450 to 19   AAA   432/437
(98 %)
3 diff
(99.4 %id)
AI799029 pooled .b 3824 to 4383 564 to 5       560/564
(99 %)
0 diff
(100 %id)
AI167140 pooled .b 3825 to 4261 437 to 1       437/437
(100 %)
1 diff
(99.8 %id)
AA469314   .b 3826 to 4118 8 to 300       293/300
(97 %)
0 diff
(100 %id)
AA579551   .b 3826 to 4253 9 to 436       428/436
(98 %)
0 diff
(100 %id)
AA572670   .b 3826 to 4254 9 to 436       428/436
(98 %)
0 diff
(100 %id)
AA970724 2 pooled tumors (clear cell type), Kidney .b 3828 to 4256 429 to 1       429/429
(100 %)
0 diff
(100 %id)
N72247 melanocyte .b 3829 to 4253 430 to 1       430/430
(100 %)
6 diff
(98.7 %id)
W56792 heart .b 3829 to 4253 426 to 1       426/426
(100 %)
2 diff
(99.6 %id)
FN091287 breast carcinoma .b 3832 to 3923 1 to 88       88/88
(100 %)
7 diff
(92.1 %id)
FN137330 breast carcinoma .b 3832 to 3924 1 to 92       92/92
(100 %)
1 diff
(99.0 %id)
AA070705   .b 3834 to 4253 1 to 422   fully sequenced, AAA   422/422
(100 %)
2 diff
(99.6 %id)
AW291685   .b 3851 to 4253 420 to 18   AAA   403/403
(100 %)
0 diff
(100 %id)
AA908223 carcinoid, lung .b 3862 to 4253 392 to 1       392/392
(100 %)
0 diff
(100 %id)
BG284010 adenocarcinoma, cell line, Prostate .b 3890 to 4253 1 to 360   AAA   360/360
(100 %)
4 diff
(98.9 %id)
DB570749 hypothalamus .b 3910 to 4382 1 to 473     Submitted on the opposite strand 473/473
(100 %)
0 diff
(100 %id)
CF780585 Pooled Chondrosarcoma Tumor cells .b 3911 to 4382 39 to 510   AAA   472/510
(92 %)
0 diff
(100 %id)
AI051485   .b 3912 to 4261 350 to 1       350/350
(100 %)
0 diff
(100 %id)
AW087661 pooled .b 3913 to 4383 475 to 5   tiling clone,   471/475
(99 %)
0 diff
(100 %id)
AI769757 2 pooled tumors (clear cell type), Kidney .b 3914 to 4383 472 to 3       470/472
(99 %)
0 diff
(100 %id)
T70182 lung .b 3926 to 4242 307 to 1       307/307
(100 %)
17 diff
(94.5 %id)
AV714879   .b 3940 to 4382 1 to 443   AAA   443/443
(100 %)
5 diff
(98.9 %id)
C14842   .b 3949 to 4252 301 to 1       301/301
(100 %)
5 diff
(98.4 %id)
AW086195 ovary, papillary serous carcinoma .b 3959 to 4382 442 to 17   AAA   426/426
(100 %)
4 diff
(99.1 %id)
AA836315 germinal center B cell .b 3964 to 4322 359 to 1       359/359
(100 %)
0 diff
(100 %id)
AI818538 normal prostate, Prostate .b 3967 to 4254 288 to 1       288/288
(100 %)
0 diff
(100 %id)
R90908 brain .b 3968 to 4242 276 to 2       275/276
(99 %)
0 diff
(100 %id)
TI_159714822   .b 3980 to 4382 148 to 549   AAA Submitted on the opposite strand 402/549
(73 %)
7 diff
(98.8 %id)
CB306873 Human Lung Epithelial cells, lung .b 3980 to 4382 39 to 440   AAA Submitted on the opposite strand 402/440
(91 %)
7 diff
(98.5 %id)
AA988475 carcinoid, lung .b 4004 to 4253 267 to 18   AAA   250/250
(100 %)
0 diff
(100 %id)
AA744362 germinal center B cell .b 4008 to 4382 391 to 17   AAA   375/375
(100 %)
0 diff
(100 %id)
AW087493 pooled .b 4019 to 4376 372 to 11       362/372
(97 %)
0 diff
(100 %id)
AI991698 pooled germ cell tumors .b 4025 to 4380 359 to 4       356/359
(99 %)
0 diff
(100 %id)
BP420899 small intestine .b 4037 to 4246 1 to 210     Submitted on the opposite strand 210/210
(100 %)
3 diff
(98.6 %id)
AW242896 Kidney .b 4061 to 4340 1 to 280     Submitted on the opposite strand 280/280
(100 %)
0 diff
(100 %id)
AA480554   .b 4062 to 4263 202 to 1       202/202
(100 %)
0 diff
(100 %id)
FN143926 breast carcinoma .b 4101 to 4206 1 to 102       102/102
(100 %)
4 diff
(96.1 %id)
AI825014 pooled germ cell tumors .b 4128 to 4382 275 to 21   AAA   255/255
(100 %)
3 diff
(98.9 %id)
C00131   .b 4146 to 4253 1 to 108       108/108
(100 %)
0 diff
(100 %id)
AA150194 uterus .b 4149 to 4253 138 to 34   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 105/106
(99 %)
0 diff
(100 %id)
AA070171   .b 4159 to 4253 95 to 1   fully sequenced,   95/95
(100 %)
0 diff
(100 %id)
FN061225 breast carcinoma .b 4186 to 4239 1 to 54       54/54
(100 %)
0 diff
(100 %id)
BP311218 brain .c 1 to 586 1 to 583   tiling clone,   583/583
(100 %)
29 diff
(95.1 %id)
DA191023 amygdala .c 380 to 938 2 to 560   tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DA608108   .c 534 to 1089 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
TI_227714348   .c 576 to 1357 852 to 72   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 781/1063
(73 %)
5 diff
(99.6 %id)
TI_227714336   .c 580 to 1357 845 to 68   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 778/1038
(74 %)
1 diff
(100.0 %id)
CD365044 Alveolar Macrophage, lung .c 644 to 1357 714 to 1       714/714
(100 %)
3 diff
(99.6 %id)
CD365036 Alveolar Macrophage, lung .c 652 to 1357 706 to 1   tiling clone,   706/706
(100 %)
3 diff
(99.6 %id)
DB320087   .c 1928 to 2375 450 to 3   tiling clone,   448/460
(97 %)
2 diff
(99.6 %id)
DA675485   .d 1 to 596 2 to 598   tiling clone, capped   597/597
(100 %)
3 diff
(99.5 %id)
DA505287 brain .d 408 to 962 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
AL833460 human fetal kidney .d 501 to 4337 1 to 3837 R95G D400G tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 3837/3837
(100 %)
5 diff
(99.9 %id)
BX470797   .d 502 to 1143 1 to 641     Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 641/641
(100 %)
7 diff
(99.0 %id)
DA530232 brain .d 731 to 1292 2 to 563   tiling clone, capped   562/562
(100 %)
2 diff
(99.7 %id)
BF332927 breast .d 1092 to 1492 403 to 4       400/403
(99 %)
0 diff
(100 %id)
BF332930 breast .d 1196 to 1492 300 to 4       297/300
(99 %)
0 diff
(100 %id)
BX470798   .d 3841 to 4337 514 to 18   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 497/497
(100 %)
0 diff
(100 %id)
DA372378 thalamus .e 1 to 560 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA527187 brain .e 1 to 595 2 to 596   tiling clone, capped   595/595
(100 %)
0 diff
(100 %id)
DA685552   .e 8 to 583 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA697027   .e 8 to 587 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA205703 brain .e 12 to 595 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
AK056370   .e 13 to 2141 1 to 2129 R379G tiling clone, available from FLJ,   2129/2129
(100 %)
1 diff
(100.0 %id)
DA116607 cerebellum .e 14 to 530 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
DA705619   .e 14 to 537 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA702554   .e 16 to 476 2 to 463   capped   462/462
(100 %)
1 diff
(99.8 %id)
DA693289   .e 21 to 592 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA708890   .e 24 to 561 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA114571 cerebellum .e 30 to 610 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA301263 hippocampus .e 30 to 602 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA026285   .e 31 to 585 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA963342 stomach .e 32 to 579 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA367161 subthalamic nucleus .e 34 to 537 2 to 505   capped   504/504
(100 %)
1 diff
(99.9 %id)
DA162357 amygdala .e 40 to 604 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA745114   .e 40 to 615 2 to 577   capped   576/578
(99 %)
3 diff
(99.5 %id)
DB173050 kidney, tumor tissue .e 40 to 612 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
CN482964 eye .e 50 to 699 1 to 650       650/650
(100 %)
0 diff
(100 %id)
AL534632 brain, fetal brain .e 64 to 1118 1 to 1051       1051/1051
(100 %)
17 diff
(98.4 %id)
DA173774 amygdala .e 73 to 622 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA685205   .e 83 to 622 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA963674 stomach .e 83 to 643 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA697328   .e 88 to 657 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB176644 kidney, tumor tissue .e 88 to 633 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA685108   .e 117 to 651 2 to 536   capped   535/535
(100 %)
3 diff
(99.5 %id)
BP379963 uterus .e 288 to 853 1 to 566       566/566
(100 %)
0 diff
(100 %id)
AL709917 human skeletal muscle .e 364 to 988 1 to 625       625/625
(100 %)
1 diff
(99.9 %id)
BP199037 brain .e 431 to 1011 1 to 581       581/582
(99 %)
1 diff
(99.9 %id)
DA134115 alzheimer cortex .e 432 to 989 2 to 559   capped   558/567
(98 %)
1 diff
(99.9 %id)
DB273526 uterus .e 432 to 971 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
BI598736 brain, hypothalamus .e 437 to 1121 1 to 685       685/709
(96 %)
11 diff
(98.5 %id)
DA718730   .e 438 to 999 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
TI_45211053   .e 443 to 1121 92 to 770       679/794
(85 %)
6 diff
(99.3 %id)
BP377685 uterus .e 459 to 1008 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DA368911 subthalamic nucleus .e 460 to 1018 2 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
BP195608 brain .e 462 to 1042 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP194588 brain .e 466 to 1047 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA169061 amygdala .e 466 to 1034 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
BP222521   .e 466 to 1047 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP327152 prostata .e 466 to 1045 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA116478 cerebellum .e 467 to 1044 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA208123 brain .e 467 to 1024 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA560069 heart .e 467 to 1043 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA849503 placenta .e 467 to 1020 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
BP260370 heart .e 470 to 1018 1 to 550       550/550
(100 %)
5 diff
(99.1 %id)
BP209519 cerebellum .e 494 to 1076 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA159155 amygdala .e 530 to 1100 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BG540678 lung .e 536 to 1074 1 to 543       541/944
(57 %)
16 diff
(98.4 %id)
AL534631 brain, fetal brain .e 1132 to 2118 981 to 1   tiling clone,   981/984
(99 %)
45 diff
(95.5 %id)
DB323972   .e 1619 to 2141 523 to 1       523/523
(100 %)
2 diff
(99.7 %id)
AI951349 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .f 1 to 597 599 to -1 M2H M4N Q5A C14A K19N ... tiling clone,   599/624
(95 %)
11 diff
(98.3 %id)
BP285905 lung .g 1 to 578 1 to 580   tiling clone,   580/580
(100 %)
20 diff
(96.6 %id)
BM755204 stomach .g 564 to 1045 1 to 483   tiling clone,   483/491
(98 %)
4 diff
(99.2 %id)
BG506286 embryonal carcinoma, testis .h 1 to 569 2 to 569   tiling clone,   569/569
(100 %)
13 diff
(97.8 %id)
DB103472 thymus .h 4 to 577 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BQ278248 mixed (pool of 40 RNAs) .h 12 to 322 1 to 311   AAA   311/311
(100 %)
3 diff
(99.1 %id)
DA944991 Spleen .h 21 to 579 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB157003 thymus .h 21 to 584 2 to 566   capped   565/573
(98 %)
2 diff
(99.7 %id)
DB159649 thymus .h 21 to 610 2 to 592   tiling clone, capped   591/591
(100 %)
2 diff
(99.7 %id)
DB163807 thymus .h 21 to 602 2 to 583   tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
AA809481 germinal center B cell .h 583 to 1133 551 to 2   tiling clone,   550/552
(99 %)
6 diff
(99.0 %id)
DA554054   .i 1 to 558 2 to 560 L22P tiling clone, capped   559/559
(100 %)
3 diff
(99.5 %id)
BF348907 denis_drash .j 1 to 662 662 to 7 Y2T N3I K4E R5G R6E ... tiling clone,   656/673
(97 %)
8 diff
(98.9 %id)
AA640797 alveolar rhabdomyosarcoma .j 656 to 1114 458 to 1   tiling clone,   458/458
(100 %)
6 diff
(98.7 %id)
CD699580 normal nasopharynx .j 827 to 1282 22 to 476   tiling clone,   455/476
(95 %)
0 diff
(100 %id)
BY798547 eye .k 1 to 575 1 to 575   tiling clone,   575/575
(100 %)
1 diff
(99.9 %id)
DB478830 hippocampus .k 285 to 777 1 to 492 exact     492/493
(99 %)
3 diff
(99.4 %id)
AA679026 liver and spleen .k 300 to 650 351 to 1     Submitted on the opposite strand 351/351
(100 %)
1 diff
(99.8 %id)
BF814370 colon_ins .k 338 to 853 26 to 542 I41M L45R L60W I67M F70L ...     520/542
(95 %)
41 diff
(92.5 %id)
AI608827 brain, tumor, 5 pooled (see description) .k 352 to 712 359 to 1 Y7T Q8R S9A I11S K12R ...     359/360
(99 %)
6 diff
(98.4 %id)
AV743321 cord Blood .k 401 to 711 3 to 302 I11X M13C Q14K T15Q E16R ... AAA Possibly primed on the genome, locally A rich (22/23 A in genome downstream of last aligned base) 300/302
(99 %)
3 diff
(99.1 %id)
BI009012 kidney_tumor .k 459 to 733 1 to 274       274/366
(74 %)
9 diff
(97.6 %id)
CF138752 CNCAP(3)T-225 cell line, Prostate .k 463 to 909 1 to 444       444/444
(100 %)
7 diff
(98.5 %id)
DB499620 hypothalamus .k 469 to 957 1 to 489   tiling clone,   489/489
(100 %)
0 diff
(100 %id)
TI_154168831   .k 469 to 977 80 to 585   tiling clone,   506/506
(100 %)
2 diff
(99.7 %id)
BF927367 nervous_tumor .k 489 to 771 1 to 291       288/293
(98 %)
13 diff
(95.6 %id)
CD690667 normal nasopharynx .l -9 to 587 23 to 619 F39L Y68H tiling clone,   597/619
(96 %)
2 diff
(99.7 %id)
BX649175 human retina .m 1 to 3209 1 to 3208 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 3208/3208
(100 %)
5 diff
(99.9 %id)
DB145113 thymus .m 221 to 746 2 to 528   tiling clone, capped   527/527
(100 %)
2 diff
(99.7 %id)
BP398399 pancreatic islet .m 2596 to 3093 1 to 500     Submitted on the opposite strand 500/500
(100 %)
2 diff
(99.6 %id)
BP398753 pancreatic islet .m 2611 to 3107 1 to 498     Submitted on the opposite strand 498/499
(99 %)
2 diff
(99.6 %id)
AA719433 pineal gland .m 2839 to 3216 379 to 1   tiling clone,   379/379
(100 %)
2 diff
(99.5 %id)
AK093623 thymus .n-u 1 to 2132 2 to 2129 exact tiling clone, available from FLJ,   2129/2129
(100 %)
8 diff
(99.7 %id)
DB104427 thymus .n-u 1 to 559 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
AV723649 hypothalamus .n-u 30 to 632 1 to 596       596/603
(98 %)
47 diff
(92.3 %id)
EL949862 eyeball .n-u 296 to 775 1 to 481   tiling clone,   481/481
(100 %)
5 diff
(99.0 %id)
DB342738 thymus .n-u 1537 to 2132 592 to 1 exact     592/592
(100 %)
6 diff
(99.0 %id)
AW119010 pooled .n-u 1563 to 2137 571 to 1 exact tiling clone,   571/571
(100 %)
4 diff
(99.3 %id)
AA491322 germinal center B cell .o-u 1 to 436 5 to 440 exact tiling clone, fully sequenced,   440/440
(100 %)
3 diff
(99.4 %id)
CB153844 Liver .o-u 179 to 682 15 to 518       504/518
(97 %)
0 diff
(100 %id)
AW969143   .o-u 202 to 826 621 to 1     Submitted on the opposite strand 621/625
(99 %)
11 diff
(98.3 %id)
AA505126 germinal center B cell .o-u 406 to 837 432 to 1   tiling clone, fully sequenced,   432/432
(100 %)
2 diff
(99.6 %id)
BQ438997 embryonal carcinoma, cell line, testis .p 1 to 793 1 to 797 E29X S47N I52X K54E M55D ... tiling clone,   797/897
(88 %)
10 diff
(98.9 %id)
BF677802 Prostate .q 1 to 710 1 to 692 R2G K3A G4E V5G L6P ... tiling clone,   692/869
(79 %)
36 diff
(95.9 %id)
CD698758 normal nasopharynx .r 1 to 332 32 to 364   tiling clone,   333/364
(91 %)
2 diff
(99.5 %id)
BP224949   .r 32 to 613 1 to 583   tiling clone,   583/583
(100 %)
3 diff
(99.5 %id)
GD138287   .r 42 to 225 189 to 6   AAA Submitted on the opposite strand 184/190
(96 %)
0 diff
(100 %id)
DB274051 uterus .r 42 to 578 2 to 539   capped   538/538
(100 %)
3 diff
(99.5 %id)
DA813228   .r 45 to 608 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DB150248 thymus .r 45 to 599 2 to 558   tiling clone, capped   557/557
(100 %)
4 diff
(99.3 %id)
BG393945 embryonal carcinoma, cell line, testis .r 65 to 670 1 to 607 K7N D8G E10R I11D A12C ...     607/607
(100 %)
21 diff
(96.6 %id)
DA343965 substantia nigra .r 89 to 665 2 to 580 S47N tiling clone, capped   579/579
(100 %)
5 diff
(99.2 %id)
AW502880 lymph .r 89 to 484 8 to 403       396/403
(98 %)
9 diff
(97.8 %id)
TI_154158515   .r 89 to 633 80 to 623       544/615
(88 %)
27 diff
(95.7 %id)
BP347252 brain .s 1 to 572 1 to 574 exact tiling clone,   574/582
(98 %)
2 diff
(99.7 %id)
DA967100 stomach .s 43 to 612 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA205223 brain .s 47 to 616 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
DA455229 tongue, tumor tissue .s 47 to 628 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
BP288305 lung .s 49 to 629 1 to 582   tiling clone,   582/582
(100 %)
3 diff
(99.5 %id)
BP284600 bone marrow .t 1 to 597 1 to 597 exact tiling clone,   597/597
(100 %)
3 diff
(99.5 %id)
DB161747 thymus .u 1 to 589 2 to 590 exact tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
DA706219   .va 1 to 579 2 to 580 exact tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
DA596081   Gene TAOK3, variant not shown       capped Suspected internal deletion, this clone was ignored    
AV728063 hypothalamus Gene TAOK3, variant not shown         Suspected internal deletion, this clone was ignored    
BM796224 Ascites, stomach Gene TAOK3, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p, .q, .r, .s, .t, .u, .va Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI