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Gene ITGA8TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
94 supporting clones for gene ITGA8 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK297740   ITGA8.a 1 to 3225 1 to 3222 P7A R8P R9Q P11S R12S ... tiling clone,   3222/3222
(100 %)
4 diff
(99.9 %id)
DC355268   ITGA8.a 1 to 533 1 to 530       530/530
(100 %)
3 diff
(99.5 %id)
AI865694 normal prostate, Prostate ITGA8.a 149 to 402 1 to 254     Submitted on the opposite strand 254/254
(100 %)
1 diff
(99.7 %id)
AI991802 Prostate ITGA8.a 149 to 402 1 to 254     Submitted on the opposite strand 254/254
(100 %)
0 diff
(100 %id)
AI674182 Prostate ITGA8.a 191 to 402 1 to 212     Submitted on the opposite strand 212/212
(100 %)
0 diff
(100 %id)
BF447121 Prostate ITGA8.a 197 to 402 1 to 206     Submitted on the opposite strand 206/206
(100 %)
0 diff
(100 %id)
ES307902 beard hair, skin ITGA8.a 429 to 624 1 to 199       199/199
(100 %)
2 diff
(99.0 %id)
BE828877 lung_tumor ITGA8.a 1464 to 1799 339 to 2       338/339
(99 %)
0 diff
(100 %id)
F01262 leg muscle, skeletal muscle ITGA8.a 1584 to 1807 1 to 224       224/224
(100 %)
0 diff
(100 %id)
CD677916 eye, Trabecular meshwork ITGA8.a 1593 to 2146 1 to 553       553/553
(100 %)
6 diff
(99.0 %id)
DB276841 uterus ITGA8.a 2245 to 2556 230 to 541   capped   313/540
(57 %)
6 diff
(98.9 %id)
DB234492 trachea ITGA8.a 2247 to 2817 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB235167 trachea ITGA8.a 2301 to 2863 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB291818 uterus ITGA8.a 2348 to 2944 2 to 598   capped   597/597
(100 %)
2 diff
(99.7 %id)
DB237365 trachea ITGA8.b 1 to 535 2 to 537   tiling clone, capped   536/536
(100 %)
4 diff
(99.3 %id)
DC422321 uterus ITGA8.b 92 to 592 1 to 501       501/501
(100 %)
2 diff
(99.7 %id)
BX114309 Prostate ITGA8.b 183 to 579 1 to 398       398/398
(100 %)
6 diff
(98.5 %id)
AI658695 Prostate ITGA8.b 216 to 618 403 to 1       403/403
(100 %)
0 diff
(100 %id)
AI685895 Prostate ITGA8.b 216 to 618 403 to 1       403/403
(100 %)
2 diff
(99.6 %id)
BF446919 Prostate ITGA8.b 216 to 646 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AI521164 Kidney ITGA8.b 254 to 618 365 to 1       365/365
(100 %)
0 diff
(100 %id)
BF437627 Prostate ITGA8.b 396 to 601 206 to 1       206/206
(100 %)
0 diff
(100 %id)
AA995915 pooled ITGA8.b 448 to 618 170 to 1       170/170
(100 %)
5 diff
(97.1 %id)
AK308240   ITGA8.b 489 to 2077 1 to 1589   tiling clone,   1589/1589
(100 %)
1 diff
(100.0 %id)
DC425586   ITGA8.b 489 to 953 1 to 465       465/465
(100 %)
0 diff
(100 %id)
NM_003638.1   ITGA8.b 570 to 3830 1 to 3261 V994A RefSeq,   3261/3261
(100 %)
1 diff
(100.0 %id)
L36531   ITGA8.b 684 to 3830 1 to 3148   tiling clone,   3148/3150
(99 %)
15 diff
(99.6 %id)
R87964 brain ITGA8.b 686 to 1014 1 to 330     Submitted on the opposite strand 330/411
(80 %)
9 diff
(97.9 %id)
CB963509 Blood vessels - aorta, basilar and artery ITGA8.b 924 to 1517 1 to 594       594/695
(85 %)
2 diff
(99.8 %id)
DR005282 Prostate ITGA8.b 938 to 1680 9 to 750       742/750
(98 %)
7 diff
(99.1 %id)
DA868932 Prostate ITGA8.b 1112 to 1651 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
AI193623 lung ITGA8.b 3090 to 3766 674 to 1       674/674
(100 %)
7 diff
(99.0 %id)
DB451289 testis ITGA8.b 3117 to 3591 1 to 475       475/475
(100 %)
2 diff
(99.6 %id)
BX092288 liver and spleen ITGA8.b 3161 to 3765 1 to 605   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 605/605
(100 %)
2 diff
(99.7 %id)
AA779994 liver and spleen ITGA8.b 3162 to 3762 601 to 1       601/601
(100 %)
2 diff
(99.7 %id)
R08796 liver and spleen ITGA8.b 3163 to 3397 1 to 238       238/332
(71 %)
8 diff
(97.6 %id)
R94801 liver and spleen ITGA8.b 3163 to 3513 1 to 354   fully sequenced,   354/354
(100 %)
5 diff
(98.6 %id)
AI023787 liver and spleen ITGA8.b 3189 to 3766 578 to 1       578/578
(100 %)
4 diff
(99.4 %id)
DB350388 trachea ITGA8.b 3197 to 3762 566 to 1       566/566
(100 %)
1 diff
(99.9 %id)
AA630195 lung ITGA8.b 3216 to 3762 547 to 1       547/547
(100 %)
4 diff
(99.3 %id)
AI085621 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus ITGA8.b 3219 to 3756 538 to 1       446/538
(82 %)
41 diff
(92.4 %id)
AW771675 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney ITGA8.b 3293 to 3765 472 to 1       472/472
(100 %)
3 diff
(99.4 %id)
BF437411 Prostate ITGA8.b 3319 to 3763 445 to 1       445/445
(100 %)
1 diff
(99.8 %id)
R08797 liver and spleen ITGA8.b 3439 to 3758 323 to 1       323/424
(76 %)
8 diff
(98.2 %id)
R94719 liver and spleen ITGA8.b 3483 to 3761 283 to 1   fully sequenced,   283/283
(100 %)
4 diff
(98.6 %id)
F00334 leg muscle, skeletal muscle ITGA8.b 3493 to 3762 270 to 1       270/270
(100 %)
1 diff
(99.7 %id)
DA189217 amygdala ITGA8.c 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
CD357514 Blood vessels - aorta, basilar and artery ITGA8.d 1 to 714 1 to 727 V119G V120G E121R F122I H123P ... tiling clone,   727/730
(99 %)
20 diff
(97.3 %id)
DA178421 amygdala ITGA8.e 1 to 557 2 to 557 V16A tiling clone, capped   556/556
(100 %)
3 diff
(99.5 %id)
CD241892 Blood vessels - aorta, basilar and artery ITGA8.e 472 to 1220 1 to 752   tiling clone,   752/756
(99 %)
10 diff
(98.7 %id)
DB253798 uterus ITGA8.e 625 to 1170 2 to 547   capped   546/546
(100 %)
4 diff
(99.3 %id)
BG541439 lung ITGA8.e 631 to 1377 1 to 733   tiling clone,   733/860
(85 %)
33 diff
(96.2 %id)
DB261916 uterus ITGA8.e 715 to 1268 2 to 558   tiling clone, capped   557/557
(100 %)
5 diff
(99.2 %id)
CA395504 eye, RPE/choroid ITGA8.e 1370 to 1963 1 to 594   tiling clone,   594/594
(100 %)
3 diff
(99.5 %id)
DB248740 uterus ITGA8.e 1577 to 2133 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA361207 subthalamic nucleus ITGA8.e 1670 to 2222 2 to 553   tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
CA388792 eye, RPE/choroid ITGA8.e 1740 to 2052 1 to 313       313/313
(100 %)
3 diff
(99.1 %id)
TI_151795766   ITGA8.e 1929 to 2557 112 to 740   tiling clone,   629/629
(100 %)
3 diff
(99.6 %id)
M85929   ITGA8.e 2020 to 2372 1 to 353       353/354
(99 %)
3 diff
(99.2 %id)
DB280652 uterus ITGA8.f-u 1 to 538 2 to 539   tiling clone, to resequence, capped   538/538
(100 %)
15 diff
(97.3 %id)
DA568241 whole embryo, mainly head ITGA8.f-u 1355 to 2130 2 to 775   tiling clone, capped   774/776
(99 %)
6 diff
(99.3 %id)
C03352 heart ITGA8.f-u 1535 to 1970 9 to 441   tiling clone,   433/452
(95 %)
14 diff
(97.0 %id)
BG400443 Kidney ITGA8.f-u 1635 to 2492 1 to 865   tiling clone,   865/867
(99 %)
33 diff
(96.2 %id)
AW069453 bone marrow stroma ITGA8.f-u 1809 to 2313 506 to 1       506/506
(100 %)
3 diff
(99.5 %id)
AA835520 Spleen ITGA8.f-u 1861 to 2247 385 to 1       385/385
(100 %)
3 diff
(99.3 %id)
BQ004885 Chondrosarcoma, Left Pelvis ITGA8.f-u 2043 to 2747 722 to 19 Y35I L36C L37F L38* AAA   704/704
(100 %)
4 diff
(99.5 %id)
BI493397 cochlea, ear ITGA8.f-u 2049 to 2739 711 to 22 Y35I L36C L37F L38* AAA   690/690
(100 %)
3 diff
(99.6 %id)
CD677996 eye, Trabecular meshwork ITGA8.f-u 2175 to 2739 1 to 565 exact tiling clone, AAA   565/565
(100 %)
0 diff
(100 %id)
DB354729 whole embryo, mainly head ITGA8.f-u 2193 to 2739 543 to 1 R7G     543/545
(99 %)
8 diff
(98.6 %id)
BG958521 colon ITGA8.f-u 2238 to 2661 1 to 425 L21P Y35I L36C L37F L38*     425/428
(99 %)
12 diff
(97.2 %id)
BX091814 poorly differentiated adenocarcinoma withsignet ring cell features, stomach ITGA8.f-u 2267 to 2613 346 to 1 Y35I L36C L37F L38*     346/346
(100 %)
5 diff
(98.6 %id)
DB352462 uterus ITGA8.f-u 2294 to 2739 445 to 1 E2X Y35I L36C L37F L38* to resequence,   445/445
(100 %)
5 diff
(98.9 %id)
DB516766 testis ITGA8.f-u 2304 to 2743 1 to 440 exact   Submitted on the opposite strand 440/440
(100 %)
0 diff
(100 %id)
AI572450 poorly differentiated adenocarcinoma withsignet ring cell features, stomach ITGA8.f-u 2305 to 2600 295 to 1 Y35I L36C L37F L38*     295/295
(100 %)
3 diff
(99.0 %id)
D62247   ITGA8.f-u 2308 to 2624 1 to 310 G5X Y35I L36C L37F L38*     310/310
(100 %)
11 diff
(96.5 %id)
AA903473 leiomyosarcoma, soft tissue ITGA8.f-u 2311 to 2746 441 to 6 L37I     436/441
(98 %)
0 diff
(100 %id)
DV461295 cochlea, ear ITGA8.f-u 2325 to 2620 1 to 295       295/299
(98 %)
16 diff
(94.7 %id)
AA219085   ITGA8.f-u 2357 to 2614 1 to 258   fully sequenced,   258/258
(100 %)
0 diff
(100 %id)
AA903229 leiomyosarcoma, soft tissue ITGA8.f-u 2369 to 2746 386 to 9       378/386
(97 %)
0 diff
(100 %id)
AI686236 Prostate ITGA8.f-u 2382 to 2723 341 to 1       341/341
(100 %)
2 diff
(99.5 %id)
BE350310 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney ITGA8.f-u 2454 to 2744 291 to 1       291/291
(100 %)
1 diff
(99.7 %id)
AI569825 Kidney ITGA8.f-u 2462 to 2744 282 to 1       282/282
(100 %)
7 diff
(97.6 %id)
D79652 aorta ITGA8.f-u 2476 to 2739 1 to 263       263/263
(100 %)
2 diff
(99.3 %id)
AA219086   ITGA8.f-u 2480 to 2599 120 to 1   fully sequenced,   120/120
(100 %)
0 diff
(100 %id)
BU735798 eye, fetal eyes ITGA8.f-u 2495 to 2748 272 to 19   tiling clone, AAA   254/254
(100 %)
0 diff
(100 %id)
D79912 aorta ITGA8.f-u 2525 to 2745 1 to 221       221/221
(100 %)
1 diff
(99.6 %id)
AA131272 uterus ITGA8.h 1 to 438 1 to 437 exact tiling clone, fully sequenced,   437/437
(100 %)
0 diff
(100 %id)
BX106890 uterus ITGA8.h 2 to 666 1 to 665       665/665
(100 %)
1 diff
(99.9 %id)
AA599597   ITGA8.h 210 to 668 461 to 3       459/461
(99 %)
0 diff
(100 %id)
AL697739 human skeletal muscle ITGA8.h 212 to 676 483 to 19   AAA   465/465
(100 %)
1 diff
(99.8 %id)
BF939224 Prostate ITGA8.h 301 to 845 549 to 5   tiling clone,   545/549
(99 %)
0 diff
(100 %id)
AA131323 uterus ITGA8.h 408 to 673 269 to 4   fully sequenced,   266/269
(98 %)
6 diff
(97.8 %id)
AI808604 pooled ITGA8.h 413 to 845 434 to 3       432/434
(99 %)
0 diff
(100 %id)
AI436104 pooled ITGA8.h 423 to 850 433 to 6   tiling clone,   428/433
(98 %)
0 diff
(100 %id)
AI452922 pooled ITGA8.h 526 to 849 335 to 12   AAA   324/324
(100 %)
4 diff
(98.8 %id)
DA934849 Spleen ITGA8.i 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
BF335803 colon ITGA8.j-u 1 to 334 8 to 341 H7D P10L G14A F15C T16V ... tiling clone,   334/341
(97 %)
6 diff
(98.3 %id)
AA297173 brain, cerebellum ITGA8.k 1 to 309 1 to 309 exact tiling clone,   309/311
(99 %)
2 diff
(99.4 %id)
AL700846 human skeletal muscle Gene ITGA8, variant not shown         This clone was ignored    
R88006 brain Gene ITGA8, variant not shown         Submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g-u, .h, .i, .j-u, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI