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Gene ITGA2BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
75 supporting clones for gene ITGA2B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM148153 leukopheresis .a 1 to 490 1 to 490   tiling clone,   490/490
(100 %)
1 diff
(99.8 %id)
AK315335 Spleen .a 98 to 3249 1 to 3152 A120S     3152/3152
(100 %)
2 diff
(100.0 %id)
DC427846   .a 98 to 673 1 to 576       576/576
(100 %)
0 diff
(100 %id)
M34480   .a 98 to 3430 1 to 3333 P23A G313A E346D N565D P1029H ...     3333/3333
(100 %)
9 diff
(99.8 %id)
NM_000419.3   .a 98 to 3431 1 to 3334 exact RefSeq,   3334/3334
(100 %)
0 diff
(100 %id)
DA482952   .a 99 to 652 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA933820 Spleen .a 99 to 674 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA947506 Spleen .a 99 to 664 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
TI_1520871627   .a 103 to 493 138 to 528     Submitted on the opposite strand 391/528
(74 %)
12 diff
(97.8 %id)
TI_1520874851   .a 103 to 1264 64 to 1224     Submitted on the opposite strand 1161/1287
(90 %)
34 diff
(97.4 %id)
TI_1520876235   .a 103 to 734 128 to 759     Submitted on the opposite strand 632/763
(82 %)
8 diff
(99.0 %id)
TI_1320134997   .a 103 to 738 137 to 772     Submitted on the opposite strand 636/772
(82 %)
9 diff
(98.9 %id)
BC117443 Lung, PCR rescued clones .a 104 to 3378 1 to 3275 exact tiling clone,   3275/3275
(100 %)
0 diff
(100 %id)
BC126442 Lung, PCR rescued clones .a 104 to 3378 1 to 3275 exact     3275/3275
(100 %)
0 diff
(100 %id)
AA442793   .a 118 to 528 15 to 424       410/424
(96 %)
9 diff
(97.9 %id)
J02764   .a 129 to 3431 1 to 3303 G313A C633S     3303/3303
(100 %)
2 diff
(100.0 %id)
AI185019 lung .a 217 to 569 353 to 1       353/353
(100 %)
18 diff
(95.0 %id)
BX496241 Liver .a 481 to 950 1 to 470       470/470
(100 %)
1 diff
(99.8 %id)
TI_1320133469   .a 634 to 1673 9 to 1047       1039/1048
(99 %)
12 diff
(98.9 %id)
AI660200 thymus, pooled .a 650 to 1118 1 to 467     Submitted on the opposite strand 467/475
(98 %)
12 diff
(97.5 %id)
DA620153   .a 836 to 1423 2 to 589   capped   588/588
(100 %)
4 diff
(99.4 %id)
TI_1520876223   .a 991 to 1952 1 to 965       965/965
(100 %)
16 diff
(98.4 %id)
X06831   .a 1303 to 3431 1 to 2129       2129/2129
(100 %)
3 diff
(99.9 %id)
TI_1320133489   .a 1348 to 2396 1 to 1045       1047/1187
(88 %)
25 diff
(97.9 %id)
TI_1520876229   .a 1358 to 2110 9 to 760       752/760
(98 %)
8 diff
(99.0 %id)
TI_1320133479   .a 1670 to 2624 12 to 966       957/966
(99 %)
9 diff
(99.1 %id)
DQ841705   .a 1712 to 2234 1 to 523       523/523
(100 %)
2 diff
(99.7 %id)
TI_1520877271   .a 1763 to 2277 524 to 9       516/524
(98 %)
2 diff
(99.7 %id)
TI_1520877275   .a 2133 to 2648 524 to 9       516/524
(98 %)
1 diff
(99.9 %id)
BE018845 cervix .a 2264 to 2590 1 to 327       327/327
(100 %)
0 diff
(100 %id)
AW997241 breast_normal .a 2284 to 2579 1 to 295       295/295
(100 %)
3 diff
(99.0 %id)
TI_1520871895   .a 2312 to 2780 477 to 9       469/483
(97 %)
1 diff
(99.8 %id)
BI049647 placenta_normal .a 2414 to 2667 289 to 36       254/289
(87 %)
0 diff
(100 %id)
TI_1520874475   .a 2479 to 3378 968 to 62     Submitted on the opposite strand 907/1161
(78 %)
12 diff
(99.0 %id)
TI_57235312   .a 2512 to 3244 100 to 834       735/834
(88 %)
10 diff
(98.9 %id)
BX281671 leukocyte .a 2515 to 3010 1 to 496       496/496
(100 %)
0 diff
(100 %id)
BI909264 leukocyte .a 2515 to 3244 1 to 732       732/732
(100 %)
3 diff
(99.6 %id)
AL048974 testis .a 2524 to 3039 1 to 515       515/515
(100 %)
4 diff
(99.3 %id)
CN409333 embryonic stem cells, cell lines H1, H7, andH9 .a 2725 to 3298 15 to 594       585/594
(98 %)
10 diff
(98.4 %id)
M18085   .a 2729 to 3431 1 to 703       703/703
(100 %)
0 diff
(100 %id)
TI_1520872455   .a 2746 to 3378 877 to 246       632/877
(72 %)
9 diff
(99.0 %id)
TI_159702665   .a 2782 to 3431 776 to 127   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 650/942
(69 %)
31 diff
(96.8 %id)
AA905458 pooled .a 2852 to 3400 543 to 1       543/545
(99 %)
16 diff
(97.1 %id)
DB508768 testis .a 3016 to 3431 1 to 415     Submitted on the opposite strand 415/415
(100 %)
15 diff
(96.4 %id)
BM145891 leukopheresis .a 3016 to 3430 431 to 17   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 415/415
(100 %)
0 diff
(100 %id)
BE302405 cervix .a 3048 to 3432 386 to 2   tiling clone,   385/386
(99 %)
1 diff
(99.8 %id)
BM145986 leukopheresis .a 3188 to 3429 260 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 242/265
(91 %)
0 diff
(100 %id)
R28994   .a 3211 to 3279 1 to 69       69/69
(100 %)
0 diff
(100 %id)
AI334914 bone marrow, stem cell 34+/38+ .a 3224 to 3432 1 to 208     Submitted on the opposite strand 208/243
(85 %)
7 diff
(97.2 %id)
BE241567 leukopheresis .a 3268 to 3429 164 to 3       162/164
(98 %)
0 diff
(100 %id)
AB209552 brain .b 1 to 3184 6 to 3189 exact tiling clone,   3189/3189
(100 %)
0 diff
(100 %id)
AF098114   .b 1046 to 1760 1 to 715   AAA   715/715
(100 %)
0 diff
(100 %id)
CV815476 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 2489 to 2916 1 to 428       428/428
(100 %)
0 diff
(100 %id)
AK303081 thymus .c 1 to 1212 1 to 1212 exact tiling clone,   1212/1212
(100 %)
0 diff
(100 %id)
DC404767 thymus .c 1 to 547 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DB443794 testis .d 1 to 444 1 to 444   tiling clone,   444/444
(100 %)
7 diff
(98.5 %id)
DC319783 brain .d 3 to 573 1 to 574   tiling clone,   574/574
(100 %)
3 diff
(99.5 %id)
DC350567 brain .d 118 to 640 1 to 524   tiling clone,   524/524
(100 %)
2 diff
(99.7 %id)
BE409167 choriocarcinoma, placenta .d 151 to 723 1 to 588       562/589
(95 %)
23 diff
(96.1 %id)
AI991183 colon, colonic mucosa from 3 patients with Crohn'sdisease .e 1 to 514 515 to 1   tiling clone,   515/515
(100 %)
1 diff
(99.9 %id)
BF195604 fibrotheoma, ovary .e 45 to 494 450 to 1       450/450
(100 %)
7 diff
(98.5 %id)
BF513348   .e 69 to 562 494 to 1   tiling clone,   494/494
(100 %)
0 diff
(100 %id)
BF732510 fibrotheoma, ovary .e 199 to 563 365 to 1       365/365
(100 %)
1 diff
(99.8 %id)
DB093493 testis .e 370 to 934 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DC308458 cerebellum .e 643 to 1145 1 to 506   tiling clone,   506/506
(100 %)
5 diff
(99.1 %id)
CV373087 lung_tumor .f-u 1 to 218 1 to 223   tiling clone,   223/230
(96 %)
17 diff
(92.7 %id)
BQ332415 lung_tumor .f-u 28 to 500 1 to 473   tiling clone,   473/473
(100 %)
6 diff
(98.8 %id)
CV373111 lung_tumor .f-u 34 to 211 9 to 190   tiling clone,   182/203
(89 %)
11 diff
(94.6 %id)
BE241740 leukopheresis .f-u 41 to 349 1 to 309       309/309
(100 %)
2 diff
(99.4 %id)
DB114051 thymus .g 1 to 581 2 to 583 exact tiling clone, capped   582/582
(100 %)
1 diff
(99.9 %id)
DC303010 cerebellum .h 1 to 565 1 to 565 exact tiling clone,   565/565
(100 %)
0 diff
(100 %id)
DB154758 thymus .i 1 to 461 2 to 462 exact tiling clone, capped   461/461
(100 %)
0 diff
(100 %id)
AK297155   Gene ITGA2B, variant not shown         Suspected internal deletion, this clone was ignored    
BI042028 nervous_tumor Gene ITGA2B, variant not shown         This clone was ignored    
CD175774 embryonic stem cells, WA01, passage 38 Gene ITGA2B, variant not shown       AAA This clone was ignored    
AI161182 brain, glioblastoma (pooled) Gene ITGA2B, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI