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Gene IQGAP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
501 supporting clones for gene IQGAP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC151834 Clones donated by Kazusa DNA Research Inst. .a 1 to 6379 1 to 6379 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 6379/6379
(100 %)
1 diff
(100.0 %id)
D29640   .a 1 to 6379 1 to 6379 exact available from KIAA,   6379/6379
(100 %)
1 diff
(100.0 %id)
BX646567   .a 24 to 535 1 to 512       512/512
(100 %)
0 diff
(100 %id)
NM_003870.3   .a 24 to 7238 1 to 7215 exact RefSeq,   7215/7219
(99 %)
5 diff
(100.0 %id)
AL706189 human skeletal muscle .a 41 to 776 1 to 736       736/736
(100 %)
0 diff
(100 %id)
DA167585 amygdala .a 43 to 603 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA019371   .a 45 to 588 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA393634 thalamus .a 45 to 612 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA670803   .a 45 to 642 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
L33075 placenta, liver .a 52 to 7228 395 to 7573 exact tiling clone,   7179/7573
(94 %)
12 diff
(99.9 %id)
DA443524 tongue, tumor tissue .a 56 to 644 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
AL698971 human skeletal muscle .a 58 to 470 1 to 413       413/413
(100 %)
0 diff
(100 %id)
BF673726 Prostate .a 58 to 667 1 to 610   available from MGC, AAA   610/883
(69 %)
10 diff
(98.9 %id)
DA402641 thalamus .a 59 to 613 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA445984 tongue, tumor tissue .a 59 to 634 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA451771 tongue, tumor tissue .a 59 to 636 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BC005906 Prostate .a 59 to 1035 1 to 976   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 976/990
(98 %)
7 diff
(99.3 %id)
DA656834   .a 59 to 634 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA335487 hippocampus .a 61 to 649 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA344066 substantia nigra .a 61 to 641 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA437575 tongue, tumor tissue .a 61 to 648 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA443612 tongue, tumor tissue .a 61 to 612 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA456154 tongue, tumor tissue .a 61 to 629 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA471032   .a 61 to 619 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA556156   .a 61 to 628 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA677399   .a 61 to 649 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA690305   .a 61 to 622 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA707613   .a 61 to 642 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA707620   .a 61 to 640 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA873458 Prostate .a 61 to 625 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA991695 synovial membrane tissue from rheumatioidarthritis .a 61 to 593 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB209981 trachea .a 61 to 622 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB212184 trachea .a 61 to 596 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA439255 tongue, tumor tissue .a 62 to 614 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA623498 Kidney .a 64 to 607 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BQ898433 dorsal root ganglia .a 65 to 877 12 to 828       817/909
(89 %)
13 diff
(98.6 %id)
DA724048   .a 65 to 640 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
AI752664 Bone, Hip .a 66 to 529 5 to 468       464/468
(99 %)
6 diff
(98.8 %id)
BC089385 Peripheral Nervous System, dorsal rootganglion .a 73 to 932 1 to 860   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 860/867
(99 %)
1 diff
(99.9 %id)
BX282246 melanotic melanoma, skin .a 74 to 565 1 to 492       492/492
(100 %)
0 diff
(100 %id)
BC064971 Skin, melanotic melanoma. .a 74 to 2946 1 to 2873   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2873/2880
(99 %)
1 diff
(100.0 %id)
AL706204 human skeletal muscle .a 75 to 826 1 to 752       752/752
(100 %)
2 diff
(99.8 %id)
BQ424156 melanotic melanoma, skin .a 76 to 926 1 to 862   available from MGC,   862/862
(100 %)
14 diff
(98.4 %id)
BC139731 PCR rescued clones .a 79 to 5845 1 to 5767 A434V     5767/5775
(99 %)
3 diff
(100.0 %id)
BC020549 Colon, adenocarcinoma .a 80 to 2946 1 to 2867   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2867/2874
(99 %)
2 diff
(100.0 %id)
BC037425 Skin, melanotic melanoma. .a 81 to 2946 12 to 2877   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2866/2873
(99 %)
1 diff
(100.0 %id)
DA886204   .a 82 to 624 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA444836 tongue, tumor tissue .a 83 to 655 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BC110811 Testis, embryonal carcinoma .a 89 to 2946 1 to 2858   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2858/2865
(99 %)
2 diff
(100.0 %id)
AU279866   .a 90 to 662 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DA444164 tongue, tumor tissue .a 91 to 662 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB196992 trachea .a 91 to 670 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BE872360 adenocarcinoma, colon .a 101 to 773 1 to 672   available from MGC,   672/744
(90 %)
7 diff
(99.1 %id)
CR995339 T-Lymphocytes .a 101 to 959 1 to 859       859/865
(99 %)
0 diff
(100 %id)
ES310032 scalp interfollicular dermis, skin .a 103 to 648 1 to 546       546/546
(100 %)
6 diff
(99.0 %id)
AK307643 synovial membrane tissue from rheumatoidarthritis .a 107 to 2938 1 to 2832       2832/2832
(100 %)
3 diff
(99.9 %id)
DA989529 synovial membrane tissue from rheumatioidarthritis .a 108 to 642 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
CA405610 adipose .a 144 to 874 1 to 733       733/735
(99 %)
18 diff
(97.6 %id)
AL706224 human skeletal muscle .a 150 to 886 1 to 737       737/737
(100 %)
0 diff
(100 %id)
DA433535 tongue, tumor tissue .a 201 to 963 2 to 772   capped   771/809
(95 %)
15 diff
(98.2 %id)
DA020898   .a 261 to 834 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
FN070260 breast carcinoma .a 368 to 468 1 to 100       100/100
(100 %)
1 diff
(99.0 %id)
AW802880 uterus .a 658 to 952 308 to 14       295/308
(95 %)
3 diff
(99.1 %id)
AU136299 placenta .a 676 to 1287 2 to 615   capped   614/690
(88 %)
5 diff
(99.3 %id)
CB158034 Liver .a 908 to 1321 1 to 414       414/414
(100 %)
0 diff
(100 %id)
CT004941 T-Lymphocytes .a 956 to 1730 1 to 778       778/778
(100 %)
4 diff
(99.5 %id)
DA247932 brain .a 1029 to 1619 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
BF742277 breast .a 1252 to 1721 471 to 1     Submitted on the opposite strand 471/471
(100 %)
3 diff
(99.4 %id)
BX642725   .a 1298 to 1806 1 to 509       509/509
(100 %)
0 diff
(100 %id)
AA229660   .a 1314 to 1697 384 to 2       383/390
(98 %)
1 diff
(99.8 %id)
BQ951462 leiomyosarcoma, uterus .a 1323 to 2164 1 to 852       852/899
(94 %)
19 diff
(97.9 %id)
AW994296 breast_normal .a 1347 to 1818 483 to 16     Submitted on the opposite strand 468/483
(96 %)
1 diff
(99.8 %id)
DB223648 trachea .a 1366 to 1928 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA471345   .a 1411 to 1982 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA550855   .a 1747 to 2471 2 to 724   capped   723/736
(98 %)
11 diff
(98.6 %id)
BX457182 thymus .a 1820 to 2627 1 to 809       809/809
(100 %)
3 diff
(99.7 %id)
BE091808 breast .a 1823 to 2226 405 to 2     Submitted on the opposite strand 404/405
(99 %)
9 diff
(97.8 %id)
FN142200 breast carcinoma .a 1939 to 2016 1 to 78       78/78
(100 %)
5 diff
(93.6 %id)
AA191258   .a 1955 to 2149 193 to 1     Submitted on the opposite strand 193/193
(100 %)
2 diff
(99.0 %id)
TI_227717580   .a 2153 to 2909 878 to 122   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 703/1066
(65 %)
59 diff
(94.5 %id)
FN051766 breast carcinoma .a 2191 to 2290 1 to 99       99/100
(99 %)
2 diff
(98.0 %id)
AA436585 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2363 to 2504 1 to 142   fully sequenced,   142/142
(100 %)
0 diff
(100 %id)
DA551586   .a 2372 to 2888 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
BI021327 marrow .a 2420 to 2800 381 to 1       381/381
(100 %)
0 diff
(100 %id)
DA652738   .a 2436 to 2995 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AW351776 colon .a 2458 to 2616 160 to 1       160/161
(99 %)
2 diff
(98.8 %id)
AA594437 colon, colon tumor RER+ .a 2459 to 2938 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AA436558 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2460 to 2933 474 to 1   fully sequenced,   474/474
(100 %)
0 diff
(100 %id)
AI633620 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2463 to 2933 471 to 1       471/471
(100 %)
0 diff
(100 %id)
BF515820   .a 2469 to 2953 487 to 3   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 485/491
(98 %)
1 diff
(99.8 %id)
BF512097   .a 2470 to 2953 486 to 3   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 484/486
(99 %)
0 diff
(100 %id)
BJ992387 hepatoblastoma .a 2491 to 2899 409 to 1       409/409
(100 %)
0 diff
(100 %id)
TI_57235019   .a 2493 to 3229 2 to 755       752/755
(99 %)
28 diff
(96.3 %id)
BE767161 nervous_tumor .a 2541 to 2807 267 to 2       266/267
(99 %)
5 diff
(98.2 %id)
DA235846 brain .a 2541 to 3106 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
AI752665 Bone, Hip .a 2547 to 2931 385 to 1       385/385
(100 %)
0 diff
(100 %id)
DA706461   .a 2558 to 3129 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA657693   .a 2563 to 3137 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
AU156631 placenta .a 2607 to 2938 333 to 1       333/333
(100 %)
4 diff
(98.8 %id)
AF401205   .a 2630 to 2900 9 to 279       271/279
(97 %)
7 diff
(97.5 %id)
DA399675 thalamus .a 2631 to 3144 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
BU594854 mixed (pool of 40 RNAs) .a 2657 to 3444 1 to 791       791/821
(96 %)
8 diff
(99.1 %id)
CN398090 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2704 to 3421 1 to 719       719/719
(100 %)
1 diff
(99.9 %id)
BI020783 marrow .a 2716 to 3093 381 to 1       385/381
(101 %)
15 diff
(96.1 %id)
CN398094 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2722 to 3449 1 to 728       728/728
(100 %)
0 diff
(100 %id)
AA533406 normal prostatic epithelial cells, Prostate .a 2730 to 2933 219 to 16   AAA   204/210
(97 %)
3 diff
(98.6 %id)
AU185675 skin .a 2789 to 2938 150 to 1       150/150
(100 %)
0 diff
(100 %id)
DA676851   .a 2831 to 3413 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BE818808 breast_normal .a 2842 to 3195 357 to 8       350/357
(98 %)
0 diff
(100 %id)
BX485045   .a 2885 to 3435 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DB219346 trachea .a 2895 to 3465 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BF229706 colon_est .a 2898 to 3350 461 to 8       454/461
(98 %)
2 diff
(99.6 %id)
BF229602 colon_est .a 2910 to 3311 407 to 6       406/407
(99 %)
9 diff
(97.8 %id)
DA684893   .a 2925 to 3478 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB218572 trachea .a 2926 to 3484 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB214640 trachea .a 2939 to 3464 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
TI_154153887   .a 2941 to 3557 84 to 698       615/642
(95 %)
21 diff
(96.8 %id)
DA863824 placenta .a 2943 to 3512 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BE813996 breast_normal .a 2969 to 3354 386 to 1       386/386
(100 %)
2 diff
(99.5 %id)
BP365465 lung .a 2973 to 3555 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA243751 brain .a 2981 to 3570 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
BM786415 Ascites, stomach .a 2982 to 3660 1 to 679       679/679
(100 %)
0 diff
(100 %id)
TI_154149322   .a 3001 to 3809 79 to 889       811/811
(100 %)
28 diff
(96.6 %id)
BQ431697 melanotic melanoma, skin .a 3025 to 3895 1 to 875       875/876
(99 %)
10 diff
(98.9 %id)
DA784693 brain .a 3057 to 3629 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CV316520 uterus_tumor .a 3066 to 3349 19 to 306       288/306
(94 %)
15 diff
(95.1 %id)
DA850573 placenta .a 3098 to 3628 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA851875 placenta .a 3119 to 3688 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BF088881 head_neck .a 3143 to 3502 362 to 7       358/362
(98 %)
4 diff
(98.9 %id)
BQ379067 uterus_tumor .a 3147 to 3273 25 to 153       129/153
(84 %)
9 diff
(94.2 %id)
BE084696 breast .a 3165 to 3358 197 to 6     Submitted on the opposite strand 192/210
(91 %)
0 diff
(100 %id)
BE694238 breast .a 3166 to 3349 182 to 1       182/182
(100 %)
3 diff
(98.4 %id)
CX782044 human embryonic stem cells .a 3168 to 3944 1 to 777       777/777
(100 %)
0 diff
(100 %id)
CN482353 eye .a 3240 to 3876 1 to 637       637/637
(100 %)
0 diff
(100 %id)
DB218268 trachea .a 3250 to 3797 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA453906 tongue, tumor tissue .a 3291 to 3888 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
BF760415 colon .a 3321 to 3682 383 to 22     Submitted on the opposite strand 362/383
(94 %)
4 diff
(99.0 %id)
DA647620   .a 3363 to 3916 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
TI_154152882   .a 3384 to 4039 80 to 733       654/658
(99 %)
23 diff
(96.6 %id)
CN398091 embryonic stem cells, cell lines H1, H7, andH9 .a 3428 to 4194 1 to 768       768/768
(100 %)
5 diff
(99.4 %id)
FN150851 breast carcinoma .a 3447 to 3527 1 to 81       81/81
(100 %)
0 diff
(100 %id)
W76226 heart .a 3491 to 3677 196 to 10     Submitted on the opposite strand 187/196
(95 %)
4 diff
(98.0 %id)
W72472 heart .a 3493 to 3594 1 to 103     Submitted on the opposite strand 103/103
(100 %)
5 diff
(95.2 %id)
DA120401 cerebellum .a 3514 to 4075 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA934562 Spleen .a 3545 to 4133 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
TI_154165200   .a 3569 to 4245 80 to 765   AAA   686/835
(82 %)
16 diff
(98.1 %id)
DA673292   .a 3595 to 4158 8 to 571   capped   564/570
(98 %)
0 diff
(100 %id)
DW437302 Liver .a 3622 to 3808 11 to 197   AAA   187/199
(93 %)
7 diff
(96.5 %id)
CR997546 T-Lymphocytes .a 3641 to 4050 1 to 410       410/410
(100 %)
0 diff
(100 %id)
DB273890 uterus .a 3644 to 4181 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB066467 testis .a 3646 to 4181 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA471098   .a 3735 to 4304 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CN398089 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3786 to 4229 1 to 444       444/444
(100 %)
0 diff
(100 %id)
DA374810 thalamus .a 3818 to 4377 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA021098   .a 3849 to 4425 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA714768   .a 3849 to 4383 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA553874   .a 3904 to 4471 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA161623 amygdala .a 3955 to 4531 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB258108 uterus .a 3960 to 4528 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA766640 tongue .a 3984 to 4457 2 to 475   capped   474/474
(100 %)
0 diff
(100 %id)
BE869652 adenocarcinoma, colon .a 4018 to 4754 1 to 734       734/846
(86 %)
18 diff
(97.9 %id)
CD617620   .a 4049 to 4373 340 to 17       325/340
(95 %)
0 diff
(100 %id)
CV569274 cornea, eye .a 4058 to 4667 1 to 610       610/610
(100 %)
0 diff
(100 %id)
ES315168 occipital scalp hair, skin .a 4070 to 4228 1 to 158       158/158
(100 %)
1 diff
(99.4 %id)
CR978069 T-Lymphocytes .a 4076 to 4796 1 to 716       716/716
(100 %)
5 diff
(99.4 %id)
DA871880 Prostate .a 4131 to 4680 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BF796173 lymph, lymphoma, cell line .a 4152 to 4876 1 to 729       729/839
(86 %)
12 diff
(98.6 %id)
AU138003 placenta .a 4164 to 4950 2 to 799   capped   798/815
(97 %)
13 diff
(98.5 %id)
BQ695197 adipose .a 4205 to 4900 1 to 694       694/694
(100 %)
4 diff
(99.5 %id)
DA661216   .a 4300 to 4861 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
AI492975 Kidney .a 4304 to 4772 469 to 1       469/469
(100 %)
0 diff
(100 %id)
CD244519 testis .a 4312 to 5125 1 to 825       825/842
(97 %)
13 diff
(98.5 %id)
BF086321 placenta_normal .a 4333 to 4576 268 to 28       241/283
(85 %)
0 diff
(100 %id)
CR998094 T-Lymphocytes .a 4391 to 5231 1 to 844       844/845
(99 %)
5 diff
(99.5 %id)
GD158728   .a 4393 to 4772 1 to 381   AAA   381/381
(100 %)
4 diff
(99.0 %id)
DR423457 eye, Pterygium .a 4394 to 5167 1 to 774       774/774
(100 %)
6 diff
(99.3 %id)
AV727276 hypothalamus .a 4420 to 5182 1 to 755       755/917
(82 %)
27 diff
(97.1 %id)
BP367230 thymus .a 4432 to 5015 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BX956233   .a 4434 to 5183 1 to 748       748/748
(100 %)
2 diff
(99.8 %id)
DA590343 lung .a 4434 to 5003 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA276736 corpus callosum .a 4444 to 5007 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA657310   .a 4457 to 5030 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BI766589 pooled lung and spleen .a 4465 to 5274 1 to 812       812/812
(100 %)
8 diff
(99.1 %id)
TI_57181568   .a 4465 to 5274 68 to 879       812/879
(92 %)
14 diff
(98.5 %id)
BG533888 Liver .a 4479 to 5224 1 to 749       749/751
(99 %)
16 diff
(97.9 %id)
CB132792 Liver .a 4508 to 5075 1 to 568       568/568
(100 %)
0 diff
(100 %id)
CR989306 T-Lymphocytes .a 4526 to 5376 1 to 854       854/854
(100 %)
4 diff
(99.6 %id)
DA538578 Kidney .a 4554 to 5118 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BP343754 stomach mucosa .a 4593 to 5175 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BG619127 placenta .a 4629 to 5362 1 to 735       735/737
(99 %)
8 diff
(99.0 %id)
DB047223 testis .a 4633 to 5196 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA952553 Spleen .a 4641 to 5214 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB167225 kidney, tumor tissue .a 4646 to 5036 2 to 392   capped   391/391
(100 %)
0 diff
(100 %id)
DB171540 kidney, tumor tissue .a 4646 to 5215 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CF995778 mixed .a 4650 to 4772 1 to 123   AAA   123/123
(100 %)
5 diff
(96.0 %id)
BQ920972 leiomyosarcoma, uterus .a 4657 to 5570 1 to 916       916/917
(99 %)
9 diff
(99.1 %id)
BE005424 breast_normal .a 4665 to 5070 405 to 1     Submitted on the opposite strand 405/405
(100 %)
1 diff
(99.8 %id)
DA604720   .a 4712 to 5218 2 to 508   capped   507/507
(100 %)
1 diff
(99.9 %id)
AU280194   .a 4715 to 5286 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DB102336 thymus .a 4724 to 5270 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
Z22009   .a 4753 to 5061 306 to 1       306/330
(92 %)
7 diff
(97.9 %id)
BP262460 small intestine .a 4792 to 5353 1 to 582       582/583
(99 %)
43 diff
(92.7 %id)
FN091021 breast carcinoma .a 4807 to 4867 1 to 62       62/63
(98 %)
2 diff
(96.9 %id)
AU135367 placenta .a 4845 to 5588 2 to 753   capped   752/754
(99 %)
15 diff
(98.1 %id)
FN135804 breast carcinoma .a 4871 to 4950 5 to 84       80/84
(95 %)
6 diff
(92.9 %id)
AU117529 whole embryo, mainly head .a 4889 to 5720 2 to 834   capped   833/838
(99 %)
11 diff
(98.7 %id)
BG289505 bladder, transitional cell papilloma, cell line .a 4897 to 5629 1 to 734       734/822
(89 %)
21 diff
(97.5 %id)
BP263443 small intestine .a 4911 to 5492 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BF815184 colon_ins .a 4915 to 5484 577 to 10     Submitted on the opposite strand 568/577
(98 %)
0 diff
(100 %id)
BE871110 adenocarcinoma, colon .a 4917 to 5616 1 to 700       700/978
(71 %)
17 diff
(98.3 %id)
CB108843 Liver .a 4943 to 5659 1 to 717       717/717
(100 %)
2 diff
(99.8 %id)
BG105320 adrenal cortex carcinoma, cell line, adrenal gland .a 5007 to 5770 1 to 756       756/955
(79 %)
25 diff
(97.4 %id)
BU929914 placenta .a 5021 to 5779 1 to 778       778/794
(97 %)
35 diff
(95.6 %id)
BG572473 placenta .a 5023 to 5707 1 to 694       694/750
(92 %)
19 diff
(97.5 %id)
DA846615 placenta .a 5028 to 5602 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
AW579184 denis_drash .a 5045 to 5685 1 to 641       641/641
(100 %)
8 diff
(98.8 %id)
BQ314734 denis_drash .a 5052 to 5680 28 to 653       626/697
(89 %)
10 diff
(98.6 %id)
BE006011 breast_normal .a 5071 to 5707 8 to 643       636/643
(98 %)
9 diff
(98.7 %id)
BP206618 coronary artery .a 5072 to 5653 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE006002 breast_normal .a 5075 to 5758 1 to 678       678/701
(96 %)
7 diff
(99.1 %id)
CA848602 Pancreas, Purified pancreatic islet .a 5079 to 5581 1 to 503       503/503
(100 %)
1 diff
(99.9 %id)
BF678382 Prostate .a 5086 to 5638 1 to 555       555/561
(98 %)
15 diff
(97.4 %id)
BP293077 lung .a 5093 to 5674 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP370222 testis .a 5095 to 5666 1 to 572       572/572
(100 %)
8 diff
(98.7 %id)
AL110106   .a 5097 to 5773 1 to 684       684/688
(99 %)
12 diff
(98.3 %id)
BG288404 bladder, transitional cell papilloma, cell line .a 5130 to 5824 1 to 696       696/697
(99 %)
5 diff
(99.3 %id)
CD000228 Pooled-Skin .a 5190 to 5933 1 to 749       749/750
(99 %)
7 diff
(99.1 %id)
AW364526 denis_drash .a 5221 to 5826 609 to 6       604/609
(99 %)
0 diff
(100 %id)
BG613619 embryonal carcinoma, testis .a 5221 to 6024 1 to 815       815/820
(99 %)
28 diff
(96.6 %id)
CN398095 embryonic stem cells, cell lines H1, H7, andH9 .a 5230 to 5956 1 to 726       726/726
(100 %)
3 diff
(99.6 %id)
CD102178 Pooled-Skin .a 5263 to 5969 1 to 709       709/710
(99 %)
6 diff
(99.2 %id)
BE934104 head_neck .a 5303 to 5871 610 to 38       573/611
(93 %)
0 diff
(100 %id)
BQ581722 insulinoma, Pancreas .a 5303 to 5833 2 to 532   fully sequenced,   531/532
(99 %)
6 diff
(98.9 %id)
BQ631008 insulinoma, Pancreas .a 5303 to 5821 2 to 521   fully sequenced,   520/521
(99 %)
7 diff
(98.7 %id)
TI_154176009   .a 5319 to 5720 78 to 479       402/402
(100 %)
23 diff
(94.3 %id)
BG286602 bladder, transitional cell papilloma, cell line .a 5328 to 6048 1 to 724       724/973
(74 %)
22 diff
(97.8 %id)
BG149970 carcinoid, lung .a 5336 to 5702 1 to 367     Submitted on the opposite strand 367/367
(100 %)
0 diff
(100 %id)
AA910813 carcinoid, lung .a 5339 to 5782 1 to 444     Submitted on the opposite strand 444/444
(100 %)
0 diff
(100 %id)
CB118096 Liver .a 5355 to 5588 1 to 234       234/234
(100 %)
0 diff
(100 %id)
BG169344 hypernephroma, cell line, Kidney .a 5365 to 6121 1 to 741       741/944
(78 %)
22 diff
(97.7 %id)
W19747 lung .a 5369 to 5698 1 to 330       330/330
(100 %)
0 diff
(100 %id)
ES315246 occipital scalp hair, skin .a 5390 to 5577 1 to 188       188/188
(100 %)
0 diff
(100 %id)
BF858243 prostate_tumor .a 5393 to 5943 590 to 40     Submitted on the opposite strand 551/591
(93 %)
0 diff
(100 %id)
BI014661 lung_tumor .a 5412 to 6012 612 to 15       598/612
(97 %)
12 diff
(98.1 %id)
BQ961532 leiomyosarcoma, uterus .a 5417 to 6282 9 to 882       874/883
(98 %)
11 diff
(98.8 %id)
CN483215 eye .a 5426 to 6029 1 to 604       604/604
(100 %)
0 diff
(100 %id)
BF881891 lung_tumor .a 5472 to 5916 445 to 1     Submitted on the opposite strand 445/445
(100 %)
3 diff
(99.4 %id)
BF882239 lung_tumor .a 5482 to 6002 531 to 10     Submitted on the opposite strand 522/531
(98 %)
0 diff
(100 %id)
AU157415 placenta .a 5558 to 6179 612 to 1       612/624
(98 %)
20 diff
(96.8 %id)
BQ613751 insulinoma, Pancreas .a 5791 to 6392 603 to 1   fully sequenced,   603/603
(100 %)
2 diff
(99.7 %id)
BQ581465 insulinoma, Pancreas .a 5803 to 6392 591 to 1   fully sequenced,   591/591
(100 %)
2 diff
(99.7 %id)
AU144337 whole embryo, mainly head .a 5830 to 6379 549 to 1       549/550
(99 %)
11 diff
(98.0 %id)
CA848312 Pancreas, Purified pancreatic islet .a 5970 to 6539 571 to 1   tiling clone,   571/571
(100 %)
2 diff
(99.7 %id)
N79043 lung .a 6012 to 6379 372 to 1       372/372
(100 %)
6 diff
(98.4 %id)
TI_57228801   .a 6170 to 6291 823 to 943       740/891
(83 %)
28 diff
(96.9 %id)
AK298000 lung .b 1 to 1025 1 to 1025 exact tiling clone,   1025/1025
(100 %)
0 diff
(100 %id)
DC358289 lung .b 1 to 550 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DB124868 thymus .c 1 to 562 2 to 563   tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
BP362152 thalamus .c 140 to 722 1 to 582   tiling clone,   582/582
(100 %)
4 diff
(99.4 %id)
AW373596 breast .d 1 to 597 610 to 15 V4C T6P I7S E8S S9P ... tiling clone,   596/613
(97 %)
5 diff
(99.2 %id)
DA055493 cerebellum .e 1 to 543 2 to 544   tiling clone, capped   543/543
(100 %)
2 diff
(99.7 %id)
BX497401 Liver .e 414 to 1050 1 to 637   tiling clone,   637/637
(100 %)
3 diff
(99.6 %id)
BX497400 Liver .e 415 to 1001 1 to 587   tiling clone,   587/587
(100 %)
1 diff
(99.9 %id)
BU622527 cell lines, Chondrosarcoma .e 644 to 795 163 to 12       152/163
(93 %)
0 diff
(100 %id)
DA414865 thalamus .f 1 to 539 2 to 540 exact tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
DA370464 thalamus .g 1 to 567 2 to 569 exact tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
BG991249 head_neck .h 1 to 367 25 to 390   tiling clone,   366/410
(89 %)
6 diff
(98.6 %id)
DA931904 Spleen .h 102 to 665 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
BE828135 lung_tumor .h 178 to 457 7 to 288       282/288
(97 %)
6 diff
(98.0 %id)
BI020290 marrow .i 1 to 327 325 to 1   tiling clone,   325/325
(100 %)
9 diff
(97.3 %id)
BX504668   .i 53 to 653 1 to 601   tiling clone,   601/601
(100 %)
2 diff
(99.7 %id)
AK055054 brain .i 567 to 2879 1 to 2317 exact tiling clone, available from FLJ,   2317/2317
(100 %)
7 diff
(99.7 %id)
DA197631 brain .i 568 to 1126 2 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
DA370533 thalamus .i 644 to 1207 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
AW794880 uterus .i 663 to 1118 15 to 469       455/469
(97 %)
6 diff
(98.8 %id)
DB303797 brain .i 2349 to 2879 532 to 1   tiling clone,   532/532
(100 %)
4 diff
(99.3 %id)
AK125643 synovial membrane tissue from rheumatioidarthritis .j 1 to 2870 2 to 2870 exact tiling clone, available from FLJ,   2870/2870
(100 %)
3 diff
(99.9 %id)
DA991070 synovial membrane tissue from rheumatioidarthritis .j 1 to 539 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA251676 caudate nucleus .j 1169 to 1697 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
BE813954 breast_normal .j 1172 to 1437 320 to 55       266/321
(82 %)
0 diff
(100 %id)
BF770443 epid_tumor .j 1177 to 1578 410 to 4     Submitted on the opposite strand 407/413
(98 %)
0 diff
(100 %id)
BF935188 nervous_tumor .j 1186 to 1473 311 to 24     Submitted on the opposite strand 288/311
(92 %)
0 diff
(100 %id)
BG011306 placenta_normal .j 1189 to 1636 455 to 5       451/455
(99 %)
0 diff
(100 %id)
BF771140 epid_tumor .j 1201 to 1644 456 to 11     Submitted on the opposite strand 446/456
(97 %)
11 diff
(97.6 %id)
CD250767 Blood vessels - aorta, basilar and artery .j 1207 to 1895 1 to 703       703/767
(91 %)
23 diff
(97.1 %id)
CV386778 lung_tumor .j 1208 to 1614 455 to 35     Submitted on the opposite strand 421/455
(92 %)
0 diff
(100 %id)
BQ331064 lung_tumor .j 1209 to 1545 349 to 13       337/349
(96 %)
0 diff
(100 %id)
BQ331067 lung_tumor .j 1209 to 1654 448 to 4       445/448
(99 %)
0 diff
(100 %id)
BY994997   .j 1217 to 1644 10 to 437   AAA   428/437
(97 %)
6 diff
(98.7 %id)
TI_154118137   .j 1224 to 2181 1028 to 82   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 947/998
(94 %)
37 diff
(96.3 %id)
BF771128 epid_tumor .j 1240 to 1600 366 to 3     Submitted on the opposite strand 364/366
(99 %)
0 diff
(100 %id)
AW389347 stomach .j 1301 to 1643 349 to 8       342/349
(97 %)
0 diff
(100 %id)
CV399765 placenta_normal .j 1319 to 1745 431 to 1     Submitted on the opposite strand 431/431
(100 %)
39 diff
(91.0 %id)
AA852439 Bone, Hip .j 1378 to 1674 9 to 305       297/305
(97 %)
6 diff
(98.1 %id)
CX788104 human embryonic stem cells .j 1391 to 2071 1 to 682       682/682
(100 %)
1 diff
(99.9 %id)
AI940781 stomach .j 1411 to 1745 335 to 1       335/335
(100 %)
12 diff
(96.5 %id)
FN070165 breast carcinoma .j 1459 to 1520 8 to 69       62/70
(88 %)
1 diff
(98.6 %id)
BP302747   .j 1463 to 2065 1 to 603       603/603
(100 %)
1 diff
(99.9 %id)
FN096102 breast carcinoma .j 1465 to 1558 1 to 94       94/94
(100 %)
2 diff
(97.9 %id)
AA368511 placenta .j 1477 to 1637 161 to 1       161/161
(100 %)
0 diff
(100 %id)
CB159393 Liver .j 1477 to 2002 1 to 526       526/526
(100 %)
0 diff
(100 %id)
EC486461 Prostate .j 1493 to 1584 10 to 102       93/102
(91 %)
6 diff
(94.2 %id)
R67881 placenta .j 1530 to 1894 1 to 367       367/368
(99 %)
13 diff
(96.5 %id)
AW071498 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .j 1530 to 2022 494 to 1       494/494
(100 %)
3 diff
(99.4 %id)
AI656732 pooled germ cell tumors .j 1532 to 2021 491 to 1       491/491
(100 %)
2 diff
(99.6 %id)
CB118861 Liver .j 1534 to 2155 1 to 622       622/622
(100 %)
0 diff
(100 %id)
AI925603 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .j 1544 to 2026 484 to 1       484/484
(100 %)
2 diff
(99.6 %id)
AI598012 adenocarcinoma, Pancreas .j 1545 to 2022 479 to 1       479/479
(100 %)
2 diff
(99.6 %id)
AI346225 adenocarcinoma, colon .j 1551 to 2021 472 to 1       472/472
(100 %)
3 diff
(99.4 %id)
AW592275 pooled .j 1552 to 2021 471 to 1       471/471
(100 %)
2 diff
(99.6 %id)
AI684052 serous papillary carcinoma, high grade, 2pooled tumors, uterus .j 1557 to 2022 467 to 1       467/467
(100 %)
2 diff
(99.6 %id)
FN138341 breast carcinoma .j 1558 to 1653 95 to 1     Submitted on the opposite strand 95/96
(98 %)
1 diff
(99.0 %id)
H42124 breast .j 1560 to 2018 469 to 6       464/471
(98 %)
18 diff
(96.2 %id)
AA931347 pooled .j 1565 to 2021 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
AI872200 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .j 1567 to 2021 472 to 17   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 456/456
(100 %)
2 diff
(99.6 %id)
AI278547 adenocarcinoma, colon .j 1574 to 2021 449 to 1       449/449
(100 %)
3 diff
(99.4 %id)
FN066841 breast carcinoma .j 1580 to 1685 105 to 1     Submitted on the opposite strand 105/106
(99 %)
1 diff
(99.1 %id)
CB129194 Liver .j 1586 to 2123 1 to 541       541/541
(100 %)
4 diff
(99.3 %id)
AI051404   .j 1590 to 2025 437 to 1       437/437
(100 %)
2 diff
(99.6 %id)
BF382066 brain, primitive neuroectoderm .j 1599 to 2211 1 to 608       608/842
(72 %)
33 diff
(96.1 %id)
AL702055 human skeletal muscle .j 1606 to 2078 1 to 474       474/474
(100 %)
2 diff
(99.6 %id)
AI352168   .j 1607 to 2027 421 to 1       421/421
(100 %)
0 diff
(100 %id)
BE552389 pooled germ cell tumors .j 1622 to 2186 566 to 1       566/566
(100 %)
2 diff
(99.7 %id)
AW243777 serous papillary carcinoma, high grade, 2pooled tumors, uterus .j 1632 to 2021 391 to 1       391/391
(100 %)
2 diff
(99.5 %id)
ES309805 scalp interfollicular dermis, skin .j 1642 to 2066 1 to 427       427/427
(100 %)
7 diff
(98.4 %id)
BG058687 blood, lymphocyte .j 1643 to 2187 545 to 1       545/545
(100 %)
1 diff
(99.9 %id)
T27993 adipose .j 1645 to 1985 1 to 342       342/342
(100 %)
3 diff
(99.2 %id)
AI608629 normal gingiva (cell line from primarykeratinocytes) .j 1647 to 2176 536 to 6       531/536
(99 %)
0 diff
(100 %id)
BE046899 pooled germ cell tumors .j 1656 to 2188 536 to 1       536/536
(100 %)
4 diff
(99.3 %id)
CD242739 brain, Pituitary .j 1661 to 2157 1 to 503       503/1119
(44 %)
14 diff
(98.8 %id)
AW069793 bone marrow stroma .j 1663 to 2178 536 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 518/518
(100 %)
3 diff
(99.5 %id)
AW183463 pooled .j 1663 to 2021 359 to 1       359/359
(100 %)
0 diff
(100 %id)
AA648324 germinal center B cell .j 1668 to 2030 365 to 1       365/365
(100 %)
3 diff
(99.2 %id)
CD103747 Pooled-Skin .j 1669 to 2409 1 to 747       747/747
(100 %)
23 diff
(97.0 %id)
AJ706430 bone marrow .j 1682 to 2003 1 to 322       322/322
(100 %)
2 diff
(99.4 %id)
AI677811 adenocarcinoma, Pancreas .j 1691 to 2184 496 to 1       496/496
(100 %)
3 diff
(99.4 %id)
AI818911 lymph node, lymphoma, follicular mixed small and largecell .j 1693 to 2184 493 to 1       493/493
(100 %)
2 diff
(99.6 %id)
BQ276703 mixed (pool of 40 RNAs) .j 1700 to 2182 1 to 485       485/975
(49 %)
5 diff
(99.5 %id)
AI872214 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .j 1709 to 2187 482 to 1       482/482
(100 %)
3 diff
(99.4 %id)
D57775   .j 1710 to 2078 1 to 366       366/366
(100 %)
5 diff
(98.7 %id)
AI969496 malignant melanoma, metastatic to lymphnode, skin .j 1711 to 2185 477 to 1       477/477
(100 %)
3 diff
(99.4 %id)
BM984028 lung, Primary Lung Epithelial Cells .j 1711 to 1996 12 to 298     Submitted on the opposite strand 287/300
(95 %)
6 diff
(98.0 %id)
AA488693 lung .j 1727 to 2019 1 to 293       293/293
(100 %)
3 diff
(99.0 %id)
BC016714 Brain, glioblastoma .j 1730 to 2868 1 to 1140   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1140/1142
(99 %)
5 diff
(99.6 %id)
AA449132   .j 1738 to 2040 1 to 303       303/303
(100 %)
0 diff
(100 %id)
AI767519 Kidney .j 1745 to 2187 449 to 5       445/449
(99 %)
0 diff
(100 %id)
FN109225 breast carcinoma .j 1750 to 1859 107 to 1     Submitted on the opposite strand 107/111
(96 %)
5 diff
(95.5 %id)
AA732487 germinal center B cell .j 1763 to 2030 268 to 1       268/268
(100 %)
0 diff
(100 %id)
AW516025 lymph node, lymphoma, follicular mixed small and largecell .j 1767 to 2187 434 to 13       422/434
(97 %)
0 diff
(100 %id)
AI814913 adenocarcinoma, Pancreas .j 1771 to 2187 420 to 2       419/420
(99 %)
0 diff
(100 %id)
BQ962470 leiomyosarcoma, uterus .j 1774 to 2521 1 to 759       759/919
(82 %)
19 diff
(98.0 %id)
EH352206   .j 1783 to 1871 1 to 88       88/88
(100 %)
4 diff
(95.5 %id)
BQ003534 Chondrosarcoma, Left Pelvis .j 1787 to 2184 413 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 398/398
(100 %)
4 diff
(99.0 %id)
H25527 breast .j 1791 to 2167 1 to 384       384/430
(89 %)
15 diff
(96.6 %id)
AI872297 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .j 1809 to 2184 405 to 27   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 379/383
(98 %)
2 diff
(99.5 %id)
AW389345 stomach .j 1810 to 2063 11 to 271       261/278
(93 %)
21 diff
(92.5 %id)
AA766837 germinal center B cell .j 1810 to 2031 222 to 1       222/222
(100 %)
0 diff
(100 %id)
AW389341 stomach .j 1815 to 2076 14 to 278       265/292
(90 %)
15 diff
(94.9 %id)
AW316708 adenocarcinoma, Pancreas .j 1816 to 2182 367 to 1       367/367
(100 %)
1 diff
(99.8 %id)
BE218724 carcinoid, lung .j 1816 to 2020 205 to 1       205/205
(100 %)
0 diff
(100 %id)
CB962809 Blood vessels - aorta, basilar and artery .j 1831 to 2543 1 to 734       734/779
(94 %)
22 diff
(97.2 %id)
AA633899 lung .j 1836 to 2173 340 to 1       340/340
(100 %)
1 diff
(99.8 %id)
AI678918 Prostate .j 1864 to 2184 321 to 1       321/321
(100 %)
0 diff
(100 %id)
AI160807 placenta .j 1865 to 2184 334 to 13   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 322/322
(100 %)
1 diff
(99.7 %id)
BU678626 lung, Primary Lung Epithelial Cells .j 1876 to 2461 1 to 590   AAA Submitted on the opposite strand 590/590
(100 %)
5 diff
(99.2 %id)
TI_149278809   .j 1879 to 2589 65 to 779     Submitted on the opposite strand 715/779
(91 %)
6 diff
(99.3 %id)
AW662494 colon, moderately-differentiated adenocarcinoma .j 1882 to 2021 140 to 1       140/140
(100 %)
4 diff
(97.2 %id)
EL952834 eyeball .j 1898 to 2553 1 to 655       655/655
(100 %)
7 diff
(99.0 %id)
AA157031 uterus .j 1899 to 2342 1 to 446   fully sequenced,   446/446
(100 %)
3 diff
(99.4 %id)
R67882 placenta .j 1904 to 2175 285 to 10       276/287
(96 %)
0 diff
(100 %id)
TI_149312638   .j 1912 to 2870 1029 to 85   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 945/998
(94 %)
25 diff
(97.5 %id)
AI888565 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .j 1948 to 2188 243 to 2       242/243
(99 %)
0 diff
(100 %id)
AW276565 lung, two pooled squamous cell carcinomas .j 1988 to 2184 197 to 1       197/197
(100 %)
0 diff
(100 %id)
TI_154050160   .j 2017 to 2870 940 to 95   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 846/966
(87 %)
20 diff
(98.0 %id)
TI_154103944   .j 2025 to 2870 924 to 90   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 835/931
(89 %)
15 diff
(98.4 %id)
BF743663 breast .j 2026 to 2266 251 to 8     Submitted on the opposite strand 244/254
(96 %)
0 diff
(100 %id)
FN123774 breast carcinoma .j 2032 to 2145 1 to 108       108/108
(100 %)
6 diff
(94.5 %id)
FN097968 breast carcinoma .j 2040 to 2109 1 to 72       72/72
(100 %)
5 diff
(93.1 %id)
AI758855 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .j 2046 to 2184 139 to 1       321/355
(90 %)
8 diff
(97.8 %id)
CB158817 Liver .j 2046 to 2572 527 to 1     Submitted on the opposite strand 527/527
(100 %)
0 diff
(100 %id)
AA301953 aorta .j 2048 to 2182 137 to 3     Submitted on the opposite strand 135/137
(98 %)
0 diff
(100 %id)
AA150451 uterus .j 2063 to 2333 276 to 1   fully sequenced,   276/276
(100 %)
1 diff
(99.7 %id)
GD138346   .j 2080 to 2257 178 to 1     Submitted on the opposite strand 178/180
(98 %)
4 diff
(97.8 %id)
BM999011 lung, Lung Focal Fibrosis .j 2080 to 2764 2 to 683     Submitted on the opposite strand 682/683
(99 %)
6 diff
(99.2 %id)
BF969849 adrenal cortex carcinoma, cell line, adrenal gland .j 2084 to 2868 1 to 776   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 776/776
(100 %)
10 diff
(98.8 %id)
BM697460 eye, fetal eyes .j 2085 to 2638 1 to 554       554/554
(100 %)
0 diff
(100 %id)
BQ015013 Chondrosarcoma, Left Pubic Bone .j 2092 to 2870 796 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 778/778
(100 %)
7 diff
(99.2 %id)
AI709298 aorta .j 2093 to 2178 86 to 1       86/86
(100 %)
0 diff
(100 %id)
AA429562   .j 2099 to 2553 1 to 453   fully sequenced, Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 453/453
(100 %)
2 diff
(99.6 %id)
CK824910 Pancreas, Purified pancreatic islet .j 2100 to 2520 1 to 423     Submitted on the opposite strand 423/423
(100 %)
2 diff
(99.6 %id)
TI_154097513   .j 2107 to 2870 877 to 112   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 766/1113
(68 %)
32 diff
(97.2 %id)
CA446048 Chondrosarcoma, Left Pelvis .j 2110 to 2870 779 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 761/765
(99 %)
4 diff
(99.5 %id)
FN075438 breast carcinoma .j 2114 to 2216 1 to 101       101/102
(99 %)
3 diff
(97.1 %id)
BP356399   .j 2118 to 2699 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BM978193 lung .j 2124 to 2870 764 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 746/754
(98 %)
1 diff
(99.9 %id)
CA432233 cell lines, Enchondroma .j 2124 to 2870 765 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 747/747
(100 %)
1 diff
(99.9 %id)
DN917448   .j 2126 to 2667 553 to 13       541/553
(97 %)
0 diff
(100 %id)
BQ015084 Chondrosarcoma, Left Pubic Bone .j 2138 to 2869 750 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 732/732
(100 %)
7 diff
(99.1 %id)
FN074734 breast carcinoma .j 2140 to 2231 92 to 1     Submitted on the opposite strand 92/93
(98 %)
0 diff
(100 %id)
CN386652 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j 2159 to 2871 1 to 713       713/714
(99 %)
2 diff
(99.8 %id)
TI_149282750   .j 2160 to 2869 763 to 56   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 708/708
(100 %)
4 diff
(99.5 %id)
TI_154021798   .j 2160 to 2870 804 to 93   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 712/712
(100 %)
1 diff
(99.9 %id)
H03091 placenta .j 2181 to 2551 1 to 378   fully sequenced,   378/378
(100 %)
5 diff
(98.7 %id)
AA429280 ovarian tumor, ovary .j 2203 to 2544 1 to 339   fully sequenced,   339/339
(100 %)
3 diff
(99.2 %id)
AA360484   .j 2207 to 2509 1 to 303       303/303
(100 %)
0 diff
(100 %id)
DR156113 human embryonic stem cells differentiated toan early endodermal cell type .j 2207 to 2870 686 to 23   AAA Submitted on the opposite strand 664/664
(100 %)
1 diff
(99.9 %id)
FN113886 breast carcinoma .j 2228 to 2334 105 to 1     Submitted on the opposite strand 105/106
(99 %)
2 diff
(98.2 %id)
TI_154115476   .j 2229 to 2869 753 to 113   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 641/917
(69 %)
3 diff
(99.7 %id)
EC576219 Prostate .j 2230 to 2323 101 to 5       97/101
(96 %)
0 diff
(100 %id)
BE766987 nervous_tumor .j 2247 to 2749 502 to 1       502/503
(99 %)
5 diff
(99.1 %id)
DN913655   .j 2251 to 2515 1 to 265       265/265
(100 %)
0 diff
(100 %id)
BF087483 head_neck .j 2254 to 2757 537 to 33       505/537
(94 %)
0 diff
(100 %id)
TI_151808877   .j 2270 to 2869 74 to 674   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 601/601
(100 %)
3 diff
(99.6 %id)
AW368201 head_neck .j 2272 to 2794 525 to 1       525/525
(100 %)
8 diff
(98.5 %id)
BF349643 head_neck .j 2284 to 2794 512 to 1       512/516
(99 %)
7 diff
(98.7 %id)
AW376620 colon .j 2286 to 2655 389 to 16       374/389
(96 %)
14 diff
(96.5 %id)
BQ355479 head_neck .j 2291 to 2724 440 to 3       438/446
(98 %)
0 diff
(100 %id)
EH348328   .j 2292 to 2386 1 to 94       94/94
(100 %)
1 diff
(99.0 %id)
BF353434 head_neck .j 2293 to 2738 449 to 4       446/449
(99 %)
0 diff
(100 %id)
BE927054 colon_normal .j 2299 to 2785 491 to 3       489/497
(98 %)
0 diff
(100 %id)
FN079441 breast carcinoma .j 2300 to 2425 1 to 127       127/127
(100 %)
1 diff
(99.3 %id)
DN916585   .j 2302 to 2675 379 to 6       374/379
(98 %)
0 diff
(100 %id)
DB334986 synovial membrane tissue from rheumatioidarthritis .j 2307 to 2870 565 to 1       565/565
(100 %)
1 diff
(99.9 %id)
CN478986 Human Lung Epithelial cells, lung .j 2318 to 2869 2 to 552   AAA Submitted on the opposite strand 551/552
(99 %)
6 diff
(99.0 %id)
TI_149307000   .j 2359 to 2870 598 to 85   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 514/920
(55 %)
3 diff
(99.7 %id)
CK824911 Pancreas, Purified pancreatic islet .j 2365 to 2872 508 to 1     Submitted on the opposite strand 508/508
(100 %)
2 diff
(99.7 %id)
TI_154012393   .j 2372 to 2873 625 to 124   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 502/502
(100 %)
1 diff
(99.9 %id)
BP393526 pancreatic islet .j 2383 to 2883 1 to 501   tiling clone, Submitted on the opposite strand 501/501
(100 %)
1 diff
(99.9 %id)
AI126663 uterus .j 2391 to 2870 480 to 1       480/480
(100 %)
0 diff
(100 %id)
BG150702 nasopharynx, normal epithelium .j 2404 to 2851 448 to 1       448/454
(98 %)
1 diff
(99.8 %id)
DN913656   .j 2411 to 2675 271 to 7       265/278
(95 %)
0 diff
(100 %id)
DN918772   .j 2413 to 2675 269 to 7       263/269
(97 %)
0 diff
(100 %id)
AA640312 alveolar rhabdomyosarcoma .j 2420 to 2869 451 to 2       450/454
(99 %)
0 diff
(100 %id)
AA640440 alveolar rhabdomyosarcoma .j 2443 to 2869 428 to 2       427/428
(99 %)
0 diff
(100 %id)
BI028703 marrow .j 2445 to 2655 233 to 17       217/233
(93 %)
0 diff
(100 %id)
BG150701 nasopharynx, normal epithelium .j 2454 to 2862 412 to 4       409/412
(99 %)
0 diff
(100 %id)
BE716340 head_neck .j 2461 to 2806 341 to 1       341/346
(98 %)
9 diff
(97.4 %id)
BE716661 head_neck .j 2461 to 2827 399 to 32       368/415
(88 %)
0 diff
(100 %id)
BE817121 breast_normal .j 2461 to 2837 400 to 24       377/405
(93 %)
0 diff
(100 %id)
AA487568 lung .j 2469 to 2870 402 to 1       402/402
(100 %)
1 diff
(99.8 %id)
AA665043 alveolar rhabdomyosarcoma .j 2470 to 2866 412 to 17   AAA   396/401
(98 %)
0 diff
(100 %id)
BE817116 breast_normal .j 2472 to 2837 390 to 23       368/392
(93 %)
0 diff
(100 %id)
BE838409 prostate_normal .j 2472 to 2837 371 to 6       366/371
(98 %)
0 diff
(100 %id)
BF086846 placenta_normal .j 2473 to 2797 329 to 2       328/330
(99 %)
0 diff
(100 %id)
AI188735 placenta .j 2473 to 2870 419 to 22   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 398/398
(100 %)
0 diff
(100 %id)
CU447697 epidermis .j 2476 to 2756 1 to 280       280/286
(97 %)
10 diff
(96.6 %id)
BE768247 prostate_tumor .j 2480 to 2718 239 to 1       239/239
(100 %)
2 diff
(99.2 %id)
FN153156 breast carcinoma .j 2480 to 2580 97 to 1     Submitted on the opposite strand 97/97
(100 %)
5 diff
(94.9 %id)
D61825   .j 2484 to 2705 1 to 222       222/222
(100 %)
0 diff
(100 %id)
BE091528 breast .j 2485 to 2671 191 to 4     Submitted on the opposite strand 188/191
(98 %)
0 diff
(100 %id)
FN115358 breast carcinoma .j 2486 to 2593 111 to 1     Submitted on the opposite strand 111/111
(100 %)
3 diff
(97.3 %id)
BE716758 head_neck .j 2493 to 2827 358 to 24       335/358
(93 %)
0 diff
(100 %id)
DN916043   .j 2495 to 2675 186 to 6       181/203
(89 %)
0 diff
(100 %id)
DN912228   .j 2502 to 2675 180 to 7       174/180
(96 %)
0 diff
(100 %id)
DN912755   .j 2502 to 2675 179 to 6       174/179
(97 %)
0 diff
(100 %id)
DN914496   .j 2502 to 2675 180 to 7       174/180
(96 %)
0 diff
(100 %id)
DN914624   .j 2502 to 2675 179 to 6       174/179
(97 %)
0 diff
(100 %id)
DN915562   .j 2502 to 2675 179 to 6       174/179
(97 %)
0 diff
(100 %id)
DN915794   .j 2502 to 2571 1 to 70       70/70
(100 %)
0 diff
(100 %id)
DN916698   .j 2502 to 2675 180 to 7       174/180
(96 %)
0 diff
(100 %id)
DN917429   .j 2502 to 2630 129 to 1       129/129
(100 %)
1 diff
(99.3 %id)
DN919694   .j 2502 to 2675 177 to 7       171/177
(96 %)
0 diff
(100 %id)
DN919728   .j 2502 to 2667 178 to 13       166/178
(93 %)
0 diff
(100 %id)
DN915941   .j 2503 to 2675 179 to 7       173/180
(96 %)
0 diff
(100 %id)
AA427716 ovarian tumor, ovary .j 2514 to 2870 357 to 1   fully sequenced,   357/357
(100 %)
0 diff
(100 %id)
AA476602   .j 2516 to 2869 358 to 5       354/358
(98 %)
0 diff
(100 %id)
FN085189 breast carcinoma .j 2518 to 2606 91 to 1     Submitted on the opposite strand 91/95
(95 %)
2 diff
(97.9 %id)
H03092 placenta .j 2521 to 2869 352 to 1   fully sequenced,   352/352
(100 %)
3 diff
(99.2 %id)
AA429448   .j 2523 to 2869 358 to 11   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 348/348
(100 %)
5 diff
(98.6 %id)
AA852440 Bone, Hip .j 2534 to 2823 297 to 7       291/297
(97 %)
0 diff
(100 %id)
BE716735 head_neck .j 2562 to 2827 299 to 30       270/299
(90 %)
0 diff
(100 %id)
DN918828   .j 2567 to 2675 114 to 6       109/114
(95 %)
0 diff
(100 %id)
DN918827   .j 2596 to 2675 1 to 80       80/86
(93 %)
3 diff
(96.6 %id)
FN135916 breast carcinoma .j 2614 to 2696 90 to 7     Submitted on the opposite strand 84/93
(90 %)
0 diff
(100 %id)
FN062714 breast carcinoma .j 2679 to 2742 64 to 2     Submitted on the opposite strand 63/64
(98 %)
0 diff
(100 %id)
FN174827 breast carcinoma .j 2679 to 2744 66 to 1     Submitted on the opposite strand 66/66
(100 %)
0 diff
(100 %id)
T24877   .j 2688 to 2869 189 to 9       181/189
(95 %)
0 diff
(100 %id)
AW898816 nervous_normal .k 1 to 374 1 to 375 I28N Y29L D30* tiling clone,   375/382
(98 %)
5 diff
(98.7 %id)
BI713125 Pancreas, Purified pancreatic islet .l 1 to 520 1 to 520 exact tiling clone,   520/520
(100 %)
1 diff
(99.9 %id)
AI991234 colon, colonic mucosa from 3 patients with Crohn'sdisease .l 38 to 399 622 to 260   AAA   363/610
(59 %)
0 diff
(100 %id)
AW857120 colon .l 577 to 1171 595 to 1   tiling clone,   595/597
(99 %)
15 diff
(97.5 %id)
BI712173 Pancreas, Purified pancreatic islet .l 676 to 1201 528 to 3   tiling clone,   526/528
(99 %)
0 diff
(100 %id)
CB241693 Human Lung Epithelial cells, lung .l 701 to 1195 514 to 19   AAA   496/505
(98 %)
1 diff
(99.9 %id)
CF887774 Human Lung Epithelial cells, lung .l 701 to 1068 1 to 368       368/368
(100 %)
7 diff
(98.1 %id)
BE156004 head_neck .l 850 to 1149 354 to 57     Submitted on the opposite strand 298/357
(83 %)
0 diff
(100 %id)
AJ705685 bone marrow .l 998 to 1186 12 to 200       189/200
(94 %)
6 diff
(97.0 %id)
AK130574 Spleen .m-u 1 to 1942 1 to 1942 exact tiling clone, available from FLJ,   1942/1943
(99 %)
1 diff
(100.0 %id)
H52210 liver and spleen .m-u 306 to 641 1 to 338 C10X W21X V22E W28X V29A ...     338/338
(100 %)
5 diff
(98.6 %id)
H52212 liver and spleen .m-u 952 to 1337 395 to 1       395/406
(97 %)
14 diff
(96.6 %id)
BP396390 pancreatic islet .m-u 1444 to 1937 1 to 495     Submitted on the opposite strand 495/495
(100 %)
1 diff
(99.8 %id)
AA779315 liver and spleen .n-u 1 to 375 1 to 375 exact tiling clone, Submitted on the opposite strand 375/375
(100 %)
0 diff
(100 %id)
AW379343 head_neck .n-u 113 to 572 478 to 19 exact     460/485
(94 %)
0 diff
(100 %id)
BE148532 head_neck .n-u 113 to 575 22 to 483 L22P     462/489
(94 %)
10 diff
(98.0 %id)
BE148669 head_neck .n-u 161 to 819 672 to 18 R2T T3L L4S R5P P6G ... tiling clone, Submitted on the opposite strand 655/675
(97 %)
0 diff
(100 %id)
BF806072 colon_ins .n-u 301 to 838 10 to 545   tiling clone,   536/545
(98 %)
6 diff
(98.9 %id)
U75809   .o-u 1 to 145 162 to 18   tiling clone,   145/170
(85 %)
0 diff
(100 %id)
BG010198 placenta_normal .o-u 133 to 344 205 to 1   tiling clone,   205/205
(100 %)
12 diff
(94.2 %id)
BE169893 head_neck .o-u 304 to 508 206 to 1   tiling clone, Submitted on the opposite strand 206/206
(100 %)
3 diff
(98.6 %id)
FN129899 breast carcinoma .o-u 384 to 458 1 to 75       75/75
(100 %)
4 diff
(94.7 %id)
BG993480 head_neck .o-u 449 to 647 206 to 8   tiling clone,   199/210
(94 %)
0 diff
(100 %id)
BG994118 head_neck .o-u 520 to 650 134 to 3       132/135
(97 %)
0 diff
(100 %id)
AW582331 stomach .o-u 545 to 780 247 to 14   tiling clone,   234/248
(94 %)
0 diff
(100 %id)
FN172417 breast carcinoma .o-u 584 to 701 116 to 1     Submitted on the opposite strand 116/116
(100 %)
4 diff
(96.6 %id)
FN119668 breast carcinoma .o-u 587 to 671 1 to 85       85/85
(100 %)
3 diff
(96.5 %id)
AL713491 human skeletal muscle .p-u 1 to 661 1 to 661 exact tiling clone,   661/661
(100 %)
0 diff
(100 %id)
CA389714 eye, RPE/choroid .q-u 1 to 588 1 to 588 exact tiling clone,   588/588
(100 %)
0 diff
(100 %id)
AW601928 breast .r 1 to 580 7 to 586 S22P T23Q D24I S25Q V26S ... tiling clone,   580/587
(98 %)
8 diff
(98.7 %id)
AW601846 breast .r 9 to 413 599 to 195   tiling clone,   405/601
(67 %)
0 diff
(100 %id)
BE070286 breast .r 65 to 580 522 to 6 K49I tiling clone, Submitted on the opposite strand 517/525
(98 %)
2 diff
(99.7 %id)
DA268907 caudate nucleus .s 1 to 558 2 to 559 exact tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
BE828144 lung_tumor .t 1 to 404 7 to 410 exact tiling clone,   404/410
(98 %)
6 diff
(98.6 %id)
AI142697 pooled .t 86 to 524 437 to 1 I32S T33P L34S I35F R36V ... tiling clone,   437/437
(100 %)
3 diff
(99.4 %id)
AI864235 pooled .t 86 to 525 438 to 1 V2S V8G H9P L10P L11A ... tiling clone,   438/438
(100 %)
9 diff
(98.0 %id)
AW898624 nervous_normal .u-u 1 to 482 505 to 17 Q37P Q53P K62Q G72S tiling clone,   489/571
(85 %)
0 diff
(100 %id)
AK304337 trachea Gene IQGAP1, variant not shown         Suspected internal deletion, this clone was ignored    
BF770371 epid_tumor Gene IQGAP1, variant not shown              
AI653727 pooled germ cell tumors Gene IQGAP1, variant not shown       AAA This clone was ignored    
TI_159718516   Gene IQGAP1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DC418038 trachea Gene IQGAP1, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n-u, .o-u, .p-u, .q-u, .r, .s, .t, .u-u, .va-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI