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Gene IPPTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
123 supporting clones for gene IPP back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK023880 thyroid gland .a 135 to 2279 1 to 2145 exact tiling clone, available from FLJ,   2145/2145
(100 %)
0 diff
(100 %id)
AU141321 thyroid gland .a 136 to 951 2 to 814   capped   813/816
(99 %)
12 diff
(98.6 %id)
AF156857   .a 188 to 3221 1 to 3034 exact tiling clone, AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 3034/3034
(100 %)
10 diff
(99.7 %id)
NM_005897.2   .a 188 to 3221 218 to 3251 exact RefSeq, AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 3251/3251
(100 %)
0 diff
(100 %id)
BQ434257 melanotic melanoma, skin .a 1288 to 2068 1 to 794       794/906
(87 %)
14 diff
(98.5 %id)
BF382701 brain, primitive neuroectoderm .a 1586 to 2276 17 to 716       647/931
(69 %)
27 diff
(97.1 %id)
AU158910 thyroid gland .a 1752 to 2279 527 to 1       527/546
(96 %)
5 diff
(99.1 %id)
BX115016 multiple sclerosis lesions .a 1865 to 2555 1 to 691       691/691
(100 %)
3 diff
(99.6 %id)
BG533622 Liver .a 1887 to 2552 1 to 668       668/669
(99 %)
15 diff
(97.8 %id)
N45644 multiple sclerosis lesions .a 1963 to 2155 1 to 193       193/193
(100 %)
0 diff
(100 %id)
AL602457 human skeletal muscle .a 2080 to 2397 1 to 318       318/318
(100 %)
3 diff
(99.1 %id)
EL949247 eyeball .a 2183 to 2796 33 to 646       614/646
(95 %)
6 diff
(99.1 %id)
BG674613 skin .a 2196 to 2833 1 to 636       636/636
(100 %)
2 diff
(99.7 %id)
AW889728 nervous_tumor .a 2245 to 2517 296 to 24       273/296
(92 %)
0 diff
(100 %id)
BE936419 nervous_tumor .a 2259 to 2517 1 to 259       259/276
(93 %)
4 diff
(98.6 %id)
BG498670 adenocarcinoma, Prostate .a 2267 to 3054 1 to 793       793/793
(100 %)
18 diff
(97.8 %id)
BQ016739 lung, Lung Focal Fibrosis .a 2547 to 3239 693 to 1       693/693
(100 %)
4 diff
(99.5 %id)
BX420831 brain, fetal brain .a 2563 to 3240 1 to 678   tiling clone,   678/684
(99 %)
1 diff
(99.9 %id)
BE007236 breast_normal .a 2664 to 2997 1 to 334       334/336
(99 %)
22 diff
(93.5 %id)
AA724838 pooled .a 2699 to 3022 396 to 73       324/396
(81 %)
0 diff
(100 %id)
AA493863 thyroid .a 2734 to 2991 1 to 258       258/258
(100 %)
10 diff
(96.2 %id)
AW971209   .a 2736 to 3221 111 to 597   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 487/597
(81 %)
6 diff
(99.0 %id)
N48888 multiple sclerosis lesions .a 2817 to 3221 404 to 1       404/404
(100 %)
4 diff
(99.1 %id)
DA362340 subthalamic nucleus .b -10 to 563 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DA404638 thalamus .b -10 to 362 2 to 374   capped   373/373
(100 %)
0 diff
(100 %id)
DA625873 Kidney .b -8 to 549 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA341214 substantia nigra .b 12 to 579 2 to 569   capped   568/569
(99 %)
2 diff
(99.7 %id)
DA401105 thalamus .b 26 to 593 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA679254   .b 39 to 543 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
DB259708 uterus .b 79 to 643 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA220379 brain .b 102 to 576 2 to 476   capped   475/476
(99 %)
1 diff
(99.8 %id)
DA227694 brain .b 102 to 668 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB035223 testis .b 102 to 653 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB276796 uterus .b 129 to 687 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA661437   .b 138 to 708 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
BC032544 Uterus, leiomyosarcoma .b 141 to 2076 12 to 1947 K264R tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 1936/1936
(100 %)
1 diff
(100.0 %id)
BM468310 leiomyosarcoma, uterus .b 142 to 1105 1 to 977       977/1087
(89 %)
23 diff
(97.9 %id)
DA026898   .b 146 to 709 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BI766417 pooled lung and spleen .b 146 to 874 1 to 730       730/731
(99 %)
8 diff
(99.0 %id)
TI_57177730   .b 146 to 874 31 to 760       730/761
(95 %)
14 diff
(98.2 %id)
DA700145   .b 146 to 624 2 to 480   capped   479/479
(100 %)
1 diff
(99.8 %id)
BX472610   .b 155 to 547 1 to 394       394/394
(100 %)
2 diff
(99.5 %id)
DA452775 tongue, tumor tissue .b 157 to 738 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB039771 testis .b 157 to 720 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA575491   .b 158 to 605 2 to 449   capped   448/448
(100 %)
0 diff
(100 %id)
DA507072 brain .b 161 to 725 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB050797 testis .b 161 to 712 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DN991572 brain, whole brain .b 166 to 872 9 to 714       706/714
(98 %)
8 diff
(98.9 %id)
BM509814 Pancreas, Purified pancreatic islet .b 174 to 792 1 to 619       619/619
(100 %)
3 diff
(99.6 %id)
BQ777465 Pancreas, Purified pancreatic islet .b 174 to 420 1 to 247   fully sequenced,   247/247
(100 %)
2 diff
(99.2 %id)
DA294670 hippocampus .b 188 to 543 210 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA294682 hippocampus .b 188 to 492 210 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
NM_001145349.1   .b 188 to 2076 218 to 2106 exact RefSeq, AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 2106/2106
(100 %)
0 diff
(100 %id)
DA905423   .b 188 to 524 220 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
CB992320 placenta, pre-eclamptic placenta .b 189 to 947 53 to 816       764/818
(93 %)
15 diff
(98.2 %id)
AA346876 heart .b 221 to 432 1 to 213       213/213
(100 %)
1 diff
(99.6 %id)
CN294295 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 233 to 938 1 to 707       707/707
(100 %)
5 diff
(99.3 %id)
CV030783 mixed .b 238 to 850 1 to 613       613/616
(99 %)
1 diff
(99.9 %id)
DA228302 brain .b 287 to 842 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BQ788131 Pancreas, Purified pancreatic islet .b 390 to 874 485 to 1   fully sequenced,   485/485
(100 %)
0 diff
(100 %id)
BM754282 stomach .b 625 to 1225 1 to 602       602/602
(100 %)
3 diff
(99.6 %id)
FN102546 breast carcinoma .b 648 to 744 94 to 1     Submitted on the opposite strand 94/94
(100 %)
3 diff
(96.9 %id)
BE545147 cervical carcinoma cell line, cervix .b 721 to 1350 1 to 628       628/628
(100 %)
6 diff
(99.1 %id)
BF934855 nervous_tumor .b 742 to 1102 1 to 361       361/361
(100 %)
1 diff
(99.8 %id)
BM832170 stomach .b 972 to 1247 1 to 276       276/276
(100 %)
0 diff
(100 %id)
BM833305 stomach .b 973 to 1336 1 to 364   tiling clone,   364/364
(100 %)
0 diff
(100 %id)
AI003306 schizophrenic brain S-11 frontal lobe .b 988 to 1482 1 to 495     Submitted on the opposite strand 495/495
(100 %)
3 diff
(99.4 %id)
DB174086 kidney, tumor tissue .b 1317 to 1884 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
C05740   .b 1965 to 2318 9 to 363       355/363
(97 %)
6 diff
(98.4 %id)
AA134016 lung, lung carcinoma .b 1965 to 2476 1 to 508   tiling clone,   508/508
(100 %)
8 diff
(98.5 %id)
DB518694.
matches multiple genes
testis .b 1968 to 2436 469 to 1   tiling clone, also hits gene TMEM69 469/469
(100 %)
0 diff
(100 %id)
DB525498.
matches multiple genes
testis .b 1968 to 2407 440 to 1     also hits gene TMEM69 440/440
(100 %)
1 diff
(99.8 %id)
DB538276 hippocampus .b 1968 to 2402 434 to 1       434/434
(100 %)
1 diff
(99.8 %id)
DB508452.
matches multiple genes
testis .b 1969 to 2391 423 to 1     also hits gene TMEM69 423/423
(100 %)
0 diff
(100 %id)
DB534331.
matches multiple genes
hippocampus .b 1969 to 2380 413 to 2     also hits gene TMEM69 412/413
(99 %)
0 diff
(100 %id)
DB562100.
matches multiple genes
hypothalamus .b 1969 to 2459 656 to 164   tiling clone, also hits gene TMEM69 493/656
(75 %)
11 diff
(98.4 %id)
GD135737   .b 2122 to 2205 1 to 84   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 84/84
(100 %)
1 diff
(98.9 %id)
DB041069 testis .c 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
AA961650 Kidney, kidney tumor .d 1 to 403 404 to 1 G58W T59N R60Q R61E A62S ... tiling clone,   404/404
(100 %)
2 diff
(99.6 %id)
DB202946 trachea .e 1 to 584 2 to 585 exact tiling clone, capped   584/584
(100 %)
6 diff
(99.0 %id)
BG996756 head_neck .e 523 to 651 128 to 1   tiling clone,   128/128
(100 %)
6 diff
(95.4 %id)
CA308374 Alveolar Macrophage, lung .f 1 to 640 658 to 19 L2I tiling clone, AAA   640/640
(100 %)
2 diff
(99.7 %id)
AL600067   .g 1 to 300 1 to 300   tiling clone,   300/301
(99 %)
3 diff
(99.1 %id)
BG116930 duodenal adenocarcinoma, cell line, small intestine .g 111 to 553 14 to 458 R44G S82C V83C W84M T87H ... tiling clone,   445/458
(97 %)
6 diff
(98.7 %id)
R80053 placenta .g 302 to 640 16 to 356   tiling clone,   341/383
(89 %)
12 diff
(96.9 %id)
BQ012136 placenta .g 530 to 926 414 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 396/400
(99 %)
2 diff
(99.5 %id)
R79960 placenta .g 680 to 896 221 to 6   tiling clone,   216/221
(97 %)
0 diff
(100 %id)
DA868686 Prostate .g 853 to 1331 2 to 482   tiling clone, capped   481/481
(100 %)
8 diff
(98.4 %id)
BE018261 cervical carcinoma cell line, cervix .g 1384 to 1884 1 to 501   tiling clone,   501/501
(100 %)
1 diff
(99.9 %id)
CF121275 CNCAP(3)T-225 cell line, Prostate .g 1886 to 2560 8 to 678   tiling clone,   671/678
(98 %)
6 diff
(99.2 %id)
TI_154180293   .g 1886 to 2654 73 to 833       761/820
(92 %)
26 diff
(96.9 %id)
TI_154181435   .g 1887 to 2652 63 to 826       764/976
(78 %)
67 diff
(93.2 %id)
CF122019 CNCAP(3)T-225 cell line, Prostate .g 1890 to 2369 11 to 487       477/487
(97 %)
6 diff
(98.8 %id)
BX508823   .g 1935 to 2619 1 to 685   tiling clone,   685/685
(100 %)
4 diff
(99.5 %id)
BM689231 eye, eye anterior segment .g 2300 to 2708 9 to 417       409/417
(98 %)
2 diff
(99.6 %id)
AW517439 cervix .g 2393 to 2857 1 to 465     Submitted on the opposite strand 465/465
(100 %)
10 diff
(97.9 %id)
BM990928 lung, Lung Focal Fibrosis .g 2418 to 3097 10 to 689   tiling clone, Submitted on the opposite strand 680/689
(98 %)
5 diff
(99.3 %id)
W01057 liver and spleen .g 2587 to 3013 1 to 429   fully sequenced,   429/429
(100 %)
10 diff
(97.7 %id)
BF573119 melanotic melanoma, high MDR, skin .g 2675 to 3305 1 to 637       637/668
(95 %)
33 diff
(95.1 %id)
DB329782 Prostate .g 2723 to 3295 573 to 1   tiling clone,   573/573
(100 %)
0 diff
(100 %id)
AL600068   .g 2780 to 3252 472 to 1       472/472
(100 %)
4 diff
(99.2 %id)
TI_151738651   .g 2792 to 3306 623 to 109       515/625
(82 %)
0 diff
(100 %id)
AW269710 lung, two pooled squamous cell carcinomas .g 2839 to 3307 470 to 2   tiling clone,   469/470
(99 %)
0 diff
(100 %id)
AJ574229 pectoral muscle (after mastectomy) .g 2992 to 3297 4 to 310   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 307/310
(99 %)
6 diff
(98.1 %id)
N70204 liver and spleen .g 2992 to 3303 315 to 2   fully sequenced,   314/315
(99 %)
10 diff
(96.9 %id)
BE301738 cervical carcinoma cell line, cervix .g 2997 to 3307 318 to 8       311/320
(97 %)
0 diff
(100 %id)
BU633762 cell lines, Chondrosarcoma .h 1 to 748 766 to 19 K5N Y6I S7X F8X tiling clone, AAA   748/748
(100 %)
4 diff
(99.5 %id)
BU620466 cell lines, Chondrosarcoma .h 67 to 748 700 to 19   tiling clone, AAA   682/682
(100 %)
2 diff
(99.8 %id)
CA430956 cell lines, Chondrosarcoma .h 138 to 748 628 to 19   AAA   610/615
(99 %)
1 diff
(99.9 %id)
AA443498 ovarian tumor, ovary .h 734 to 1021 1 to 287   fully sequenced,   287/287
(100 %)
1 diff
(99.7 %id)
BX092679 ovarian tumor, ovary .h 736 to 1329 1 to 594   tiling clone, AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 594/594
(100 %)
1 diff
(99.9 %id)
BF431727 pooled .h 949 to 1333 393 to 4   tiling clone,   390/393
(99 %)
11 diff
(97.3 %id)
AA429484 ovarian tumor, ovary .h 991 to 1330 342 to 1   tiling clone, fully sequenced,   342/342
(100 %)
3 diff
(99.2 %id)
AI497634 anaplastic oligodendroglioma, brain .h 1089 to 1329 241 to 1       241/241
(100 %)
2 diff
(99.2 %id)
AW001225 colon, colonic mucosa from 3 patients with Crohn'sdisease .i-u 1 to 371 372 to 2 exact tiling clone,   371/372
(99 %)
0 diff
(100 %id)
AW408678 lymph .i-u 6 to 398 8 to 400 exact tiling clone,   393/400
(98 %)
1 diff
(99.8 %id)
TI_154148591   .i-u 6 to 618 77 to 693 exact tiling clone,   617/617
(100 %)
14 diff
(97.8 %id)
BM720270 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .i-u 195 to 369 1 to 175 exact AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 175/175
(100 %)
0 diff
(100 %id)
AI611345 Prostate .i-u 231 to 369 153 to 15   AAA Possibly primed on the genome, locally A rich (28/29 A in genome downstream of last aligned base) 139/139
(100 %)
0 diff
(100 %id)
DA444252 tongue, tumor tissue .j 1 to 585 2 to 587 Q118* tiling clone, capped   586/586
(100 %)
2 diff
(99.7 %id)
DA499995 brain .k 1 to 571 2 to 573 L97F R100K R101K H103T V104C ... tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
AA505429 breast .l 1 to 377 379 to 2 R29G tiling clone,   378/379
(99 %)
0 diff
(100 %id)
BX109055 placenta Gene IPP, variant not shown         Suspected internal deletion, this clone was ignored    
CR616033 fetal brain Gene IPP, variant not shown         This clone was ignored    
R32108 placenta Gene IPP, variant not shown         This clone was ignored    
R78603 placenta Gene IPP, variant not shown       fully sequenced, Submitted on the opposite strand, submitted on the opposite strand    
R78604 placenta Gene IPP, variant not shown       fully sequenced, Submitted on the opposite strand, submitted on the opposite strand    
AA514227 colon Gene IPP, variant not shown         Suspected internal deletion, this clone was ignored    
AI989347 brain, three pooled meningiomas Gene IPP, variant not shown         Suspected internal deletion, this clone was ignored    
AW134504   Gene IPP, variant not shown       AAA This clone was ignored    
CV800748 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass Gene IPP, variant not shown              
DA787805 brain Gene IPP, variant not shown       capped Suspected internal deletion, this clone was ignored    
BQ012141 placenta Gene IPP, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI