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Gene IDO1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
148 supporting clones for gene IDO1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB259949 uterus .a 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
AU138239 placenta .a 368 to 1123 2 to 764   tiling clone, capped   763/773
(98 %)
8 diff
(99.0 %id)
AU138054 placenta .a 399 to 1097 2 to 700   capped   699/701
(99 %)
7 diff
(99.1 %id)
AU139549 placenta .a 402 to 1228 2 to 833   tiling clone, capped   832/834
(99 %)
15 diff
(98.3 %id)
DB377600 placenta .a 1611 to 2188 579 to 1   tiling clone,   579/580
(99 %)
15 diff
(97.5 %id)
DB379930 placenta .a 1702 to 2188 486 to 1   tiling clone,   486/487
(99 %)
8 diff
(98.4 %id)
DB377878 placenta .a 1762 to 2244 485 to 1   tiling clone,   485/487
(99 %)
8 diff
(98.4 %id)
CN283791 embryonic stem cells, cell lines H1, H7, andH9 .b 1 to 392 1 to 391   tiling clone,   391/391
(100 %)
1 diff
(99.8 %id)
M34455   .b 319 to 2232 1 to 1914 exact tiling clone,   1914/1914
(100 %)
3 diff
(99.9 %id)
NM_002164.4   .b 844 to 2415 1 to 1572 exact RefSeq,   1572/1572
(100 %)
0 diff
(100 %id)
AU137351 placenta .b 845 to 1550 2 to 708   capped   707/718
(98 %)
6 diff
(99.2 %id)
AL709736 human skeletal muscle .b 860 to 1373 1 to 514       514/514
(100 %)
1 diff
(99.9 %id)
CD690354 normal nasopharynx .b 861 to 1324 23 to 486       464/486
(95 %)
7 diff
(98.6 %id)
BP289361 lung .b 861 to 1442 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA825691 pericardium .b 862 to 1430 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
AK313259 placenta .b 863 to 2169 1 to 1307 exact     1307/1307
(100 %)
0 diff
(100 %id)
DA583251 lung .b 864 to 1411 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA836866 placenta .b 864 to 1410 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA847517 placenta .b 864 to 1432 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BP320212 placenta .b 892 to 1473 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP320909 placenta .b 892 to 1489 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
BP321222 placenta .b 892 to 1484 1 to 594       594/594
(100 %)
4 diff
(99.4 %id)
BP321428 placenta .b 892 to 1473 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA592771 lung .b 893 to 1461 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB193441 ovary, tumor tissue .b 893 to 1464 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB272242 uterus .b 893 to 1446 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB272263 uterus .b 893 to 1456 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA839534 placenta .b 894 to 1449 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA594981 lung .b 896 to 1462 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BP320011 placenta .b 896 to 1483 1 to 591       591/591
(100 %)
3 diff
(99.5 %id)
BP321098 placenta .b 896 to 1476 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA842971 placenta .b 897 to 1493 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
DA846242 placenta .b 897 to 1465 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BP321207 placenta .b 898 to 1477 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CB118974 Liver .b 901 to 1601 1 to 701       701/701
(100 %)
0 diff
(100 %id)
DA589057 lung .b 902 to 1460 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BI769481 pooled lung and spleen .b 912 to 1741 1 to 833       833/833
(100 %)
11 diff
(98.7 %id)
TI_57182501   .b 912 to 1741 31 to 863       833/863
(96 %)
16 diff
(98.2 %id)
BC027882 Lung, Spleen, fetal, pooled .b 913 to 2406 1 to 1494 exact tiling clone, available from MGC, AAA   1494/1494
(100 %)
0 diff
(100 %id)
BX425106 placenta .b 916 to 1927 13 to 1019       1007/1082
(93 %)
14 diff
(98.8 %id)
CB995101 placenta, pre-eclamptic placenta .b 924 to 1594 23 to 700       678/829
(81 %)
21 diff
(97.5 %id)
CD693638 normal nasopharynx .b 926 to 1518 23 to 615       593/615
(96 %)
7 diff
(98.9 %id)
BP320515 placenta .b 926 to 1507 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB256162 uterus .b 927 to 1506 2 to 582   capped   581/581
(100 %)
4 diff
(99.4 %id)
CD684696 normal nasopharynx .b 929 to 1557 25 to 653       629/653
(96 %)
13 diff
(98.1 %id)
CD687406 normal nasopharynx .b 929 to 1625 41 to 736       696/736
(94 %)
9 diff
(98.8 %id)
BP321081 placenta .b 929 to 1506 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BP321424 placenta .b 929 to 1511 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AL554455 placenta, Placenta Cot 25-normalized .b 935 to 1908 1 to 967       967/971
(99 %)
10 diff
(99.0 %id)
X17668 lung .b 936 to 2410 1 to 1475 exact tiling clone,   1475/1475
(100 %)
1 diff
(100.0 %id)
AL545869 placenta, Placenta Cot 25-normalized .b 939 to 1525 1 to 587   fully sequenced,   587/587
(100 %)
0 diff
(100 %id)
AL549011 placenta, Placenta Cot 25-normalized .b 939 to 1963 1 to 1005       1005/1007
(99 %)
24 diff
(97.7 %id)
BX402492 Placenta Cot 25-normalized .b 939 to 1820 1 to 882       882/977
(90 %)
12 diff
(98.8 %id)
AL549895 placenta, Placenta Cot 25-normalized .b 940 to 2003 1 to 1053       1053/1111
(94 %)
14 diff
(98.8 %id)
AL540498 placenta .b 941 to 1643 1 to 703   fully sequenced,   703/703
(100 %)
3 diff
(99.6 %id)
CR991522 T-Lymphocytes .b 946 to 1667 1 to 723       723/723
(100 %)
2 diff
(99.8 %id)
AL553586 placenta, Placenta Cot 25-normalized .b 953 to 1695 1 to 742       742/856
(86 %)
2 diff
(99.8 %id)
AY221100   .b 958 to 2169 1 to 1212 exact     1212/1212
(100 %)
0 diff
(100 %id)
CV029510 mixed .b 958 to 1612 1 to 650       650/651
(99 %)
6 diff
(99.1 %id)
TI_1948126174   .b 958 to 1643 128 to 813   fully sequenced,   686/813
(84 %)
7 diff
(99.2 %id)
TI_1948126320   .b 958 to 1525 131 to 698   fully sequenced,   568/698
(81 %)
6 diff
(99.2 %id)
TI_1948126474   .b 958 to 1643 131 to 816   fully sequenced,   686/816
(84 %)
5 diff
(99.4 %id)
TI_1948126618   .b 958 to 1643 129 to 814   fully sequenced,   686/814
(84 %)
6 diff
(99.3 %id)
CB217134 normal endometrium, mid-secretory phase,cycle day 23, uterus .b 964 to 1579 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BG012045 placenta_normal .b 1218 to 1710 493 to 1       493/493
(100 %)
8 diff
(98.4 %id)
AL573916 placenta, Placenta Cot 25-normalized .b 1267 to 2365 1102 to 5       1098/1102
(99 %)
10 diff
(99.1 %id)
BX402491 Placenta Cot 25-normalized .b 1395 to 2323 985 to 52       934/1079
(86 %)
3 diff
(99.8 %id)
AL573365 placenta, Placenta Cot 25-normalized .b 1397 to 2377 977 to 1       977/977
(100 %)
17 diff
(98.3 %id)
AL554401 placenta, Placenta Cot 25-normalized .b 1398 to 2378 982 to 1       982/982
(100 %)
15 diff
(98.5 %id)
AL571427 placenta, Placenta Cot 25-normalized .b 1464 to 2378 915 to 1   fully sequenced,   915/915
(100 %)
2 diff
(99.8 %id)
TI_1948126321   .b 1464 to 2168 827 to 123   fully sequenced,   705/827
(85 %)
1 diff
(99.9 %id)
BI771209 pooled lung and spleen .b 1466 to 2053 1 to 589       589/593
(99 %)
4 diff
(99.4 %id)
TI_57182651   .b 1466 to 2053 31 to 619       589/623
(94 %)
10 diff
(98.4 %id)
CD369108 Alveolar Macrophage, lung .b 1503 to 2186 732 to 49   AAA   684/714
(95 %)
2 diff
(99.8 %id)
CN417555 embryonic stem cells, cell lines H1, H7, andH9 .b 1523 to 2234 1 to 712       712/712
(100 %)
0 diff
(100 %id)
AL540497 placenta .b 1582 to 2312 798 to 70   fully sequenced,   573/642
(89 %)
17 diff
(97.4 %id)
TI_1948126175   .b 1582 to 2168 711 to 125   fully sequenced,   587/711
(82 %)
0 diff
(100 %id)
TI_1948126475   .b 1582 to 2168 710 to 124   fully sequenced,   587/710
(82 %)
1 diff
(99.9 %id)
TI_1948126619   .b 1582 to 2168 710 to 124   fully sequenced,   587/710
(82 %)
0 diff
(100 %id)
AW818979 stomach .b 1612 to 2122 514 to 7       508/537
(94 %)
0 diff
(100 %id)
AW819044 stomach .b 1612 to 2122 519 to 11       509/641
(79 %)
1 diff
(99.9 %id)
BE843117 stomach .b 1612 to 2098 493 to 8       486/515
(94 %)
3 diff
(99.5 %id)
BE937560 stomach .b 1612 to 2122 514 to 7       508/537
(94 %)
0 diff
(100 %id)
TI_227714820   .b 1612 to 2410 877 to 80   AAA   798/989
(80 %)
13 diff
(98.7 %id)
CD370496 Alveolar Macrophage, lung .b 1653 to 2410 773 to 15   AAA   759/761
(99 %)
3 diff
(99.7 %id)
AI948466 2 pooled tumors (clear cell type), Kidney .b 1676 to 2406 744 to 16   AAA   729/729
(100 %)
9 diff
(98.8 %id)
AI811960 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 1692 to 2293 607 to 8       600/607
(98 %)
4 diff
(99.4 %id)
CA432661 cell lines, Chondrosarcoma .b 1716 to 2410 714 to 19   AAA   696/696
(100 %)
1 diff
(99.9 %id)
BQ007037 Chondrosarcoma, Left Pelvis .b 1717 to 2410 708 to 15   AAA   694/694
(100 %)
0 diff
(100 %id)
BI004017 head_normal .b 1720 to 2170 452 to 3       450/452
(99 %)
0 diff
(100 %id)
AL576623 placenta, Placenta Cot 25-normalized .b 1728 to 2358 631 to 1       631/863
(73 %)
8 diff
(99.1 %id)
CD742761 Alveolar Macrophage, lung .b 1735 to 2410 694 to 19   AAA   676/676
(100 %)
1 diff
(99.9 %id)
CB529600 Aveolar Macrophage, lung .b 1736 to 2410 686 to 12   AAA   675/675
(100 %)
2 diff
(99.8 %id)
BU626643 Alveolar Macrophage, lung .b 1801 to 2410 624 to 15   AAA   610/610
(100 %)
2 diff
(99.7 %id)
DB376515 placenta .b 1984 to 2410 427 to 1       427/427
(100 %)
6 diff
(98.6 %id)
DA901067   .c 1 to 678 2 to 685   tiling clone, capped   684/744
(91 %)
16 diff
(97.9 %id)
BX377576 Placenta Cot 25-normalized .c 358 to 1467 1 to 1116   tiling clone,   1116/1121
(99 %)
29 diff
(97.5 %id)
BG213491   .c 1230 to 1773 1 to 542   AAA   542/542
(100 %)
8 diff
(98.6 %id)
AW367649 head_neck .c 1231 to 1618 20 to 408       389/408
(95 %)
6 diff
(98.6 %id)
AW367679 head_neck .c 1231 to 1618 20 to 408       389/408
(95 %)
6 diff
(98.6 %id)
AI765317 2 pooled tumors (clear cell type), Kidney .c 1231 to 1833 605 to 1       605/605
(100 %)
10 diff
(98.4 %id)
AW473794 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1231 to 1831 600 to 1   tiling clone,   600/608
(98 %)
4 diff
(99.4 %id)
BX389832 Placenta Cot 25-normalized .c 1232 to 1825 1 to 591       591/595
(99 %)
6 diff
(99.0 %id)
BX389833 Placenta Cot 25-normalized .c 1232 to 1834 1 to 599       599/600
(99 %)
7 diff
(98.9 %id)
AI538864 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1233 to 1649 413 to 1       413/444
(93 %)
20 diff
(95.5 %id)
AI554199 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1233 to 1829 603 to 11   AAA   593/618
(95 %)
9 diff
(98.6 %id)
EL953317 eyeball .c 1235 to 1809 1 to 575       575/575
(100 %)
5 diff
(99.2 %id)
BU167415 leiomyosarcoma, uterus .c 1236 to 1829 12 to 606   AAA   595/606
(98 %)
6 diff
(99.1 %id)
AA838290 colon, colon tumor .c 1241 to 1829 589 to 1       589/593
(99 %)
19 diff
(96.8 %id)
BU623292 cell lines, Chondrosarcoma .c 1241 to 1829 608 to 19   AAA   590/590
(100 %)
1 diff
(99.9 %id)
AW571838 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1292 to 1834 544 to 1       544/544
(100 %)
16 diff
(97.1 %id)
BP392479 pancreatic islet .c 1330 to 1829 1 to 500     Submitted on the opposite strand 500/500
(100 %)
0 diff
(100 %id)
AW044209 pooled .c 1358 to 1834 480 to 4       477/482
(98 %)
0 diff
(100 %id)
BE466403 pooled germ cell tumors .c 1376 to 1825 450 to 1       450/450
(100 %)
0 diff
(100 %id)
BG435051 placenta .c 1378 to 1834 1 to 453       453/454
(99 %)
7 diff
(98.5 %id)
AA989422 2 pooled tumors (clear cell type), Kidney .c 1391 to 1834 447 to 4       444/447
(99 %)
0 diff
(100 %id)
BX402563 Placenta Cot 25-normalized .c 1398 to 1799 404 to 1       404/539
(74 %)
6 diff
(98.9 %id)
AI308058 2 pooled tumors (clear cell type), Kidney .c 1410 to 1833 424 to 1       424/424
(100 %)
0 diff
(100 %id)
BE775185 uterus .c 1416 to 1574 159 to 1       159/159
(100 %)
0 diff
(100 %id)
AW469917 2 pooled tumors (clear cell type), Kidney .c 1423 to 1828 409 to 4       406/409
(99 %)
0 diff
(100 %id)
FN110043 breast carcinoma .c 1493 to 1585 91 to 3     Submitted on the opposite strand 89/111
(80 %)
0 diff
(100 %id)
CD366252 Alveolar Macrophage, lung .c 1502 to 2191 704 to 16   tiling clone, AAA   689/689
(100 %)
3 diff
(99.6 %id)
AA478338 ovarian tumor, ovary .c 1523 to 1823 1 to 301   fully sequenced,   301/301
(100 %)
0 diff
(100 %id)
BX113985 ovarian tumor, ovary .c 1525 to 1825 1 to 301   AAA   301/301
(100 %)
0 diff
(100 %id)
AI742647 pooled .c 1557 to 1824 268 to 1       268/270
(99 %)
0 diff
(100 %id)
BE939347 uterus .c 1570 to 1804 1 to 234       234/234
(100 %)
18 diff
(92.4 %id)
AA478279 ovarian tumor, ovary .c 1675 to 1822 148 to 1   fully sequenced,   148/148
(100 %)
0 diff
(100 %id)
BF094375 uterus_tumor .c 1736 to 2065 1 to 326       326/326
(100 %)
7 diff
(97.9 %id)
CN417552 embryonic stem cells, cell lines H1, H7, andH9 .d 1 to 688 1 to 687   tiling clone,   687/687
(100 %)
4 diff
(99.5 %id)
CX758657 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .d 4 to 707 1 to 704     Submitted on the opposite strand 704/704
(100 %)
0 diff
(100 %id)
CX755767 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .d 7 to 724 40 to 756     Submitted on the opposite strand 717/756
(94 %)
8 diff
(99.0 %id)
CN417553 embryonic stem cells, cell lines H1, H7, andH9 .d 17 to 768 13 to 764   tiling clone,   752/764
(98 %)
6 diff
(99.3 %id)
CN417551 embryonic stem cells, cell lines H1, H7, andH9 .d 20 to 475 1 to 456       456/456
(100 %)
0 diff
(100 %id)
CN417556 embryonic stem cells, cell lines H1, H7, andH9 .d 48 to 771 1 to 724       724/732
(98 %)
2 diff
(99.8 %id)
CD693857 normal nasopharynx .d 81 to 564 26 to 512       487/512
(95 %)
9 diff
(98.3 %id)
CD684835 normal nasopharynx .d 82 to 533 42 to 493       452/493
(91 %)
6 diff
(98.8 %id)
CD698863 normal nasopharynx .d 85 to 483 15 to 414       400/414
(96 %)
6 diff
(98.6 %id)
DA840578 placenta .d 86 to 645 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA425331 colon .d 89 to 652 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CD688384 normal nasopharynx .d 156 to 282 1 to 127       127/127
(100 %)
2 diff
(98.5 %id)
BF911709 uterus_tumor .d 215 to 402 192 to 7     Submitted on the opposite strand 186/192
(96 %)
0 diff
(100 %id)
CD698687 normal nasopharynx .d 228 to 643 22 to 437       416/437
(95 %)
10 diff
(97.8 %id)
BF917390 uterus_tumor .d 352 to 610 5 to 263       259/381
(67 %)
7 diff
(98.2 %id)
AI802049 carcinoid, lung .d 554 to 1112 559 to 1       559/559
(100 %)
1 diff
(99.9 %id)
BE327522 carcinoid, lung .d 554 to 1112 559 to 1       559/559
(100 %)
1 diff
(99.9 %id)
AI302268 carcinoid, lung .d 558 to 1112 555 to 1       555/560
(99 %)
0 diff
(100 %id)
BE550733 carcinoid, lung .d 558 to 1108 554 to 6       549/554
(99 %)
15 diff
(97.3 %id)
BF448326 carcinoid, lung .d 567 to 1116 550 to 1   tiling clone,   550/550
(100 %)
1 diff
(99.9 %id)
CN417554 embryonic stem cells, cell lines H1, H7, andH9 .e 1 to 651 21 to 671   tiling clone,   651/671
(97 %)
6 diff
(99.2 %id)
BF057675 pooled germ cell tumors .e 344 to 1043 700 to 2       699/701
(99 %)
18 diff
(97.5 %id)
BE466919 pooled germ cell tumors .e 413 to 1043 630 to 2   tiling clone,   630/630
(100 %)
3 diff
(99.6 %id)
BP321240 placenta .f 1 to 573 1 to 579 E30N Y142P V143L N144T R145H ...     576/584
(98 %)
14 diff
(97.7 %id)
CR614485 placenta .f 7 to 1531 1 to 1525 exact tiling clone,   1525/1525
(100 %)
0 diff
(100 %id)
CR613807 Placenta Cot 25-normalized .f 42 to 1481 1 to 1440 exact     1440/1440
(100 %)
0 diff
(100 %id)
CR616634 Placenta Cot 25-normalized .f 42 to 1480 1 to 1439 exact     1439/1439
(100 %)
0 diff
(100 %id)
CR621546 Placenta Cot 25-normalized .f 43 to 1473 1 to 1431 exact     1431/1431
(100 %)
0 diff
(100 %id)
CR591703 placenta .f 45 to 1486 1 to 1442 exact     1442/1442
(100 %)
0 diff
(100 %id)
CD673767 eye, lens .g 1 to 502 27 to 528 exact tiling clone,   502/528
(95 %)
7 diff
(98.7 %id)
CN266497 embryonic stem cells, cell lines H1, H7, andH9 Gene IDO1, variant not shown         This clone was ignored    
DB374637 placenta Gene IDO1, variant not shown         This clone was ignored    
AU136182 placenta Gene IDO1, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI