To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene IL27RATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
105 supporting clones for gene IL27RA back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AW295066   .a 1 to 433 433 to 1   tiling clone,   433/433
(100 %)
3 diff
(99.4 %id)
AW298502   .a 59 to 433 375 to 1   tiling clone,   375/375
(100 %)
1 diff
(99.8 %id)
NM_004843.2   .a 59 to 3316 1 to 3258 exact RefSeq,   3258/3258
(100 %)
0 diff
(100 %id)
AW295061   .a 92 to 433 342 to 1       342/342
(100 %)
14 diff
(96.0 %id)
AF053004   .a 344 to 3006 1 to 2663   tiling clone,   2663/2663
(100 %)
4 diff
(99.9 %id)
AF106912   .a 357 to 2980 1 to 2624   AAA   2624/2624
(100 %)
1 diff
(100.0 %id)
DB482558 hippocampus .a 365 to 857 1 to 493       493/496
(99 %)
4 diff
(99.2 %id)
AF265242   .a 367 to 2998 1 to 2628   tiling clone,   2628/2628
(100 %)
7 diff
(99.8 %id)
AY358876   .a 367 to 2980 1 to 2610   AAA   2610/2610
(100 %)
7 diff
(99.8 %id)
BM046416 carcinoma, cell line, Prostate .a 372 to 1015 1 to 703       649/1085
(59 %)
65 diff
(94.1 %id)
BM048281 carcinoma, cell line, Prostate .a 373 to 971 1 to 597       597/597
(100 %)
5 diff
(99.2 %id)
BQ919454 carcinoma, cell line, Prostate .a 376 to 1175 1 to 807       807/911
(88 %)
10 diff
(99.0 %id)
BQ927024 carcinoma, cell line, Prostate .a 376 to 1142 1 to 773       773/950
(81 %)
22 diff
(97.7 %id)
BP337994 Spleen .a 378 to 956 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DN995333 breast cancer, Mammary gland (cancer tissue) .a 398 to 914 1 to 517       517/517
(100 %)
7 diff
(98.7 %id)
BQ957232 carcinoma, cell line, Prostate .a 405 to 1213 53 to 862       810/942
(85 %)
23 diff
(97.6 %id)
TI_154196542   .a 414 to 1225 25 to 828       804/1039
(77 %)
23 diff
(97.8 %id)
TI_154197118   .a 414 to 1013 22 to 620       599/1029
(58 %)
24 diff
(97.7 %id)
TI_154196734   .a 416 to 1015 38 to 636       599/1057
(56 %)
20 diff
(98.2 %id)
BC028003 Blood, adult leukocytes .a 426 to 2803 1 to 2378   available from MGC, AAA   2378/2378
(100 %)
0 diff
(100 %id)
BI905856 leukocyte .a 427 to 1147 1 to 731       729/731
(99 %)
16 diff
(97.9 %id)
TI_57231939   .a 427 to 1147 38 to 768       729/768
(94 %)
19 diff
(97.6 %id)
TI_154132693   .a 427 to 1175 61 to 810     Submitted on the opposite strand 750/907
(82 %)
13 diff
(98.6 %id)
AW575269 lymph .a 428 to 997 1 to 570     Submitted on the opposite strand 570/570
(100 %)
0 diff
(100 %id)
TI_1948139583   .a 481 to 1175 127 to 825       699/1343
(52 %)
29 diff
(97.9 %id)
TI_1948139584   .a 481 to 1321 126 to 975       848/1321
(64 %)
30 diff
(97.8 %id)
TI_1948139825   .a 481 to 1248 124 to 887       764/1253
(60 %)
22 diff
(98.3 %id)
TI_1948140331   .a 481 to 991 123 to 636       514/1494
(34 %)
21 diff
(98.6 %id)
TI_1948140332   .a 481 to 1175 127 to 822       696/1372
(50 %)
15 diff
(99.0 %id)
CV030371 mixed .a 482 to 1101 1 to 620       620/620
(100 %)
1 diff
(99.9 %id)
TI_1948140085   .a 483 to 997 127 to 644       518/1302
(39 %)
20 diff
(98.5 %id)
BF035293 adenocarcinoma, ovary .a 872 to 1548 1 to 681       681/681
(100 %)
12 diff
(98.3 %id)
CT001032 T-Lymphocytes .a 875 to 1620 1 to 746       746/746
(100 %)
2 diff
(99.8 %id)
BF984779 duodenal adenocarcinoma, cell line, small intestine .a 940 to 1619 1 to 679       679/896
(75 %)
8 diff
(99.2 %id)
BF826136 head_normal .a 983 to 1433 484 to 35     Submitted on the opposite strand 450/484
(92 %)
16 diff
(96.7 %id)
CF785854 mixed .a 984 to 1617 22 to 653       632/803
(78 %)
30 diff
(96.3 %id)
BF827655 head_normal .a 986 to 1451 1 to 467       467/467
(100 %)
3 diff
(99.4 %id)
BY796108 eye .a 1030 to 1630 1 to 601       601/601
(100 %)
0 diff
(100 %id)
BF828606 head_normal .a 1058 to 1449 1 to 392       392/393
(99 %)
12 diff
(97.0 %id)
BF825319 head_normal .a 1063 to 1455 1 to 393       393/403
(97 %)
2 diff
(99.6 %id)
BF825760 head_normal .a 1063 to 1433 422 to 50     Submitted on the opposite strand 372/422
(88 %)
0 diff
(100 %id)
BF825785 head_normal .a 1063 to 1433 407 to 33     Submitted on the opposite strand 375/407
(92 %)
6 diff
(98.6 %id)
BF825801 head_normal .a 1063 to 1455 1 to 393       393/403
(97 %)
1 diff
(99.8 %id)
BF825871 head_normal .a 1063 to 1455 421 to 29     Submitted on the opposite strand 393/421
(93 %)
1 diff
(99.8 %id)
BF826144 head_normal .a 1063 to 1450 388 to 1     Submitted on the opposite strand 388/388
(100 %)
13 diff
(96.7 %id)
BF826813 head_normal .a 1063 to 1433 403 to 33     Submitted on the opposite strand 371/403
(92 %)
4 diff
(99.1 %id)
BF827078 head_normal .a 1063 to 1270 1 to 210       210/210
(100 %)
5 diff
(97.7 %id)
BF828608 head_normal .a 1063 to 1433 405 to 35     Submitted on the opposite strand 371/405
(91 %)
0 diff
(100 %id)
BF828747 head_normal .a 1063 to 1455 1 to 393       393/399
(98 %)
2 diff
(99.5 %id)
BF828838 head_normal .a 1063 to 1455 421 to 30     Submitted on the opposite strand 392/421
(93 %)
0 diff
(100 %id)
BF829683 head_normal .a 1063 to 1451 1 to 389       389/389
(100 %)
0 diff
(100 %id)
BF829689 head_normal .a 1063 to 1438 1 to 377       377/403
(93 %)
6 diff
(98.6 %id)
CK000257 mixed .a 1118 to 1889 1 to 766       766/783
(97 %)
15 diff
(98.1 %id)
BF828783 head_normal .a 1175 to 1443 294 to 25     Submitted on the opposite strand 270/297
(90 %)
1 diff
(99.7 %id)
BM917928 blood, natural killer cells, cell line .a 1221 to 1852 1 to 635       635/1028
(61 %)
16 diff
(98.5 %id)
BF825870 head_normal .a 1282 to 1455 1 to 172       172/182
(94 %)
4 diff
(97.9 %id)
BX283853 B-cells, primary B-cells from tonsils (cell line) .a 1317 to 1813 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
BG756328 B-cells, primary B-cells from tonsils (cell line) .a 1317 to 2106 1 to 790       790/900
(87 %)
10 diff
(98.9 %id)
CR999612 T-Lymphocytes .a 1427 to 2062 1 to 637       637/637
(100 %)
1 diff
(99.9 %id)
AA302915 brain .a 1584 to 1907 1 to 324       324/324
(100 %)
1 diff
(99.7 %id)
BG332437 large cell carcinoma, lung .a 1669 to 2412 1 to 740       740/942
(78 %)
28 diff
(97.1 %id)
CN287418 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1726 to 2172 1 to 447       447/447
(100 %)
0 diff
(100 %id)
TI_1948139585   .a 1889 to 2397 624 to 117       508/1275
(39 %)
3 diff
(99.8 %id)
BM762764 lymph node, stomach .a 1960 to 2454 1 to 495       495/495
(100 %)
0 diff
(100 %id)
BM760781 lymph node, stomach .a 1960 to 2669 1 to 710       710/711
(99 %)
1 diff
(99.9 %id)
BM761233 lymph node, stomach .a 1960 to 2669 1 to 709       709/710
(99 %)
2 diff
(99.8 %id)
BM764289 lymph node, stomach .a 1960 to 2365 1 to 406       406/406
(100 %)
0 diff
(100 %id)
BM762468 lymph node, stomach .a 1960 to 2227 1 to 269       269/269
(100 %)
1 diff
(99.7 %id)
BM761623 lymph node, stomach .a 1960 to 2412 1 to 452       452/452
(100 %)
1 diff
(99.8 %id)
BM842397 lymph node, stomach .a 1960 to 2463 1 to 504       504/504
(100 %)
4 diff
(99.3 %id)
BM843047 lymph node, stomach .a 1960 to 2500 1 to 541       541/541
(100 %)
2 diff
(99.7 %id)
BM844856 lymph node, stomach .a 1960 to 2178 1 to 219       219/219
(100 %)
2 diff
(99.1 %id)
BG756941 B-cells, primary B-cells from tonsils (cell line) .a 2005 to 2944 1 to 929       929/986
(94 %)
19 diff
(98.1 %id)
BI335560 cervical carcinoma cell line, cervix .a 2006 to 2586 29 to 614       586/623
(94 %)
17 diff
(97.3 %id)
AI982554 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2111 to 2823 714 to 1       714/714
(100 %)
19 diff
(97.4 %id)
BM804052 embryonal carcinoma, cell line, testis .a 2196 to 2813 619 to 2     Submitted on the opposite strand 618/990
(62 %)
0 diff
(100 %id)
BE703304 nervous_normal .a 2260 to 2827 568 to 1       568/568
(100 %)
7 diff
(98.8 %id)
AA622690 lung, lung tumor .a 2353 to 2775 420 to 1       420/420
(100 %)
8 diff
(98.1 %id)
TI_154139777   .a 2373 to 2980 690 to 84     Submitted on the opposite strand 607/618
(98 %)
7 diff
(98.9 %id)
BU632122 cell lines, Chondrosarcoma .a 2395 to 3005 629 to 19   AAA Possibly primed on the genome, locally A rich (26/28 A in genome downstream of last aligned base) 611/611
(100 %)
0 diff
(100 %id)
CA426655 cell lines, Chondrosarcoma .a 2409 to 3005 615 to 19   AAA Possibly primed on the genome, locally A rich (26/28 A in genome downstream of last aligned base) 597/599
(99 %)
0 diff
(100 %id)
C03468 heart .a 2438 to 2709 16 to 287       272/287
(94 %)
6 diff
(98.0 %id)
DB551423 hippocampus .a 2520 to 3005 1 to 486     Submitted on the opposite strand 486/486
(100 %)
1 diff
(99.8 %id)
AI088984 pooled .a 2555 to 3010 456 to 1       456/456
(100 %)
7 diff
(98.5 %id)
AW403172 lymph .a 2569 to 2980 418 to 8     Submitted on the opposite strand 411/418
(98 %)
0 diff
(100 %id)
AI769137 pooled .a 2583 to 3010 429 to 1       429/429
(100 %)
2 diff
(99.6 %id)
BE925136 amnion_normal .a 2596 to 2805 1 to 210       210/235
(89 %)
4 diff
(98.3 %id)
DB384539   .a 2611 to 3005 395 to 1       395/524
(75 %)
1 diff
(99.9 %id)
AA223346 brain, neuroepithelial cells .a 2650 to 3005 358 to 1       358/358
(100 %)
7 diff
(98.1 %id)
AA223312 brain, neuroepithelial cells .a 2703 to 3006 306 to 1       306/307
(99 %)
4 diff
(98.7 %id)
AI983115 pooled germ cell tumors .a 2880 to 3316 441 to 5   tiling clone,   437/471
(92 %)
0 diff
(100 %id)
AI263885 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2892 to 3325 436 to 3   tiling clone,   434/436
(99 %)
0 diff
(100 %id)
AI820082 pooled .a 2904 to 3316 423 to 9       415/423
(98 %)
0 diff
(100 %id)
AW043766 pooled .a 2904 to 3315 424 to 13   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 412/412
(100 %)
1 diff
(99.8 %id)
BM992807 lung, Metastatic Chondrosarcoma .a 2942 to 3313 396 to 25   AAA   372/513
(72 %)
0 diff
(100 %id)
BE693466 breast .a 2956 to 3218 266 to 4       263/267
(98 %)
0 diff
(100 %id)
AW449516   .a 2996 to 3312 336 to 18   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 319/319
(100 %)
4 diff
(98.8 %id)
AI681880 carcinoid, lung .a 3006 to 3312 315 to 9       307/316
(97 %)
0 diff
(100 %id)
AI347487 colon, colon tumor, RER+ .a 3047 to 3319 293 to 21   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 273/273
(100 %)
0 diff
(100 %id)
BG251230 adenocarcinoma, cell line, Liver .a 3116 to 3315 380 to 588   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 550/588
(93 %)
30 diff
(94.9 %id)
DW449643 Liver .b-u 1 to 182 18 to 202 D8N G10W E11* tiling clone,   185/202
(91 %)
6 diff
(97.1 %id)
F02293 brain, total brain Gene IL27RA, variant not shown       fully sequenced, This clone was ignored    
F06043 brain, total brain Gene IL27RA, variant not shown       fully sequenced, This clone was ignored    
Z40234 brain, total brain Gene IL27RA, variant not shown         Suspected internal deletion, this clone was ignored    
Z44277 brain, total brain Gene IL27RA, variant not shown         Suspected internal deletion, this clone was ignored    
BG419535 Kidney, renal cell adenocarcinoma Gene IL27RA, variant not shown         This clone was ignored    
DB043729.
matches multiple genes
testis Gene IL27RA, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene kuglu, RLN3    
DB043729.
matches multiple genes
testis Gene RLN3, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene kuglu, RLN3    
DB043729.
matches multiple genes
testis Gene kuglu, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene kuglu, RLN3    
DB338046.
matches multiple genes
testis Gene IL27RA, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene kuglu, RLN3    
DB338046.
matches multiple genes
testis Gene RLN3, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene kuglu, RLN3    
DB338046.
matches multiple genes
testis Gene kuglu, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene kuglu, RLN3    
? Gene Summary Gene on genome mRNA:.a, .b-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI