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Gene IL16TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
337 supporting clones for gene IL16 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB276043 uterus .a 1 to 490 2 to 492   tiling clone, capped   491/491
(100 %)
2 diff
(99.6 %id)
DB287399 uterus .a 120 to 669 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB275393 uterus .a 149 to 714 2 to 566   capped   565/573
(98 %)
3 diff
(99.5 %id)
DB288392 uterus .a 149 to 702 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
CR747791 pooled brain, lung, testis .a 153 to 695 1 to 543       543/543
(100 %)
0 diff
(100 %id)
DB282652 uterus .a 157 to 693 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
NM_172217.3   .a 298 to 8362 1 to 8065   RefSeq,   8065/8065
(100 %)
1 diff
(100.0 %id)
AY324389   .a 399 to 4397 1 to 3999   tiling clone,   3999/3999
(100 %)
7 diff
(99.9 %id)
BG698629 skin .a 4010 to 4785 30 to 807   tiling clone,   778/807
(96 %)
26 diff
(96.8 %id)
TI_1971554095   .a 4081 to 5137 1173 to 116   tiling clone,   1058/1315
(80 %)
16 diff
(98.8 %id)
BC136660 Testicle, PCR rescued clones .b 1 to 4862 1 to 4862 H469R tiling clone,   4862/4862
(100 %)
5 diff
(99.9 %id)
DA244947 brain .b 1361 to 1936 2 to 577   tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
DA213371 brain .b 1364 to 1932 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AK222512 adipose tissue .b 2089 to 4406 1 to 2318   tiling clone, AAA   2318/2318
(100 %)
3 diff
(99.9 %id)
TI_1971556997   .b 2999 to 4205 1195 to 5       1191/1260
(94 %)
24 diff
(98.1 %id)
TI_1971555503   .b 3190 to 4294 18 to 1116       1099/1256
(87 %)
18 diff
(98.6 %id)
BQ334783 marrow .b 3462 to 3893 539 to 102       438/539
(81 %)
9 diff
(98.4 %id)
AA286927 germinal center B cell .b 3496 to 3959 1 to 462   fully sequenced,   462/462
(100 %)
2 diff
(99.6 %id)
CT000038 T-Lymphocytes .b 3595 to 4319 1 to 727       727/727
(100 %)
3 diff
(99.6 %id)
BM148514 leukopheresis .b 3686 to 4275 1 to 590       590/590
(100 %)
3 diff
(99.5 %id)
AL560713 B cells from Burkitt lymphoma .b 3720 to 4686 1 to 967       967/967
(100 %)
8 diff
(99.2 %id)
BG758549 B-cells, primary B-cells from tonsils (cell line) .b 3844 to 4628 1 to 789       789/789
(100 %)
7 diff
(99.2 %id)
AA286934 germinal center B cell .b 3898 to 4421 535 to 13   fully sequenced, AAA   523/523
(100 %)
5 diff
(99.1 %id)
NM_001172128.1   .c 1 to 8321 2 to 8322 exact RefSeq,   8322/8322
(100 %)
1 diff
(100.0 %id)
AK131530 cerebellum .c 1 to 5154 1 to 5154 exact tiling clone, available from FLJ,   5154/5154
(100 %)
5 diff
(100.0 %id)
DA124225 cerebellum .c 2 to 532 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA246348 brain .c 2 to 580 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA121823 cerebellum .c 66 to 530 2 to 466   capped   465/465
(100 %)
1 diff
(99.8 %id)
DA103304 cerebellum .c 70 to 606 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
DA108177 cerebellum .c 132 to 702 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA129033 cerebellum .c 177 to 741 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB300695 cerebellum .c 4562 to 5154 591 to 1       591/591
(100 %)
9 diff
(98.5 %id)
AL109669   .c 5566 to 8320 1 to 2756   tiling clone, AAA   2756/2756
(100 %)
3 diff
(99.9 %id)
R17227 whole brain .c 5568 to 6017 1 to 449       449/449
(100 %)
12 diff
(97.4 %id)
R41836 whole brain .c 7881 to 8320 468 to 14   AAA   455/457
(99 %)
20 diff
(95.7 %id)
AL833554 human cervix .d 1 to 8584 1 to 8584 L62S C245R N1164K C1250R tiling clone, available from DKFZ, AAA   8584/8584
(100 %)
19 diff
(99.8 %id)
CV029852 mixed .d 268 to 913 1 to 646       646/647
(99 %)
1 diff
(99.9 %id)
TI_1948130628   .d 268 to 1032 127 to 891       765/1125
(68 %)
10 diff
(99.2 %id)
TI_1948130629   .d 268 to 1058 131 to 925       795/1296
(61 %)
15 diff
(98.9 %id)
TI_1948130960   .d 268 to 941 126 to 799       674/1172
(57 %)
8 diff
(99.4 %id)
TI_1948130961   .d 268 to 1137 128 to 1005       878/1321
(66 %)
24 diff
(98.2 %id)
TI_1948131287   .d 268 to 1138 122 to 989       868/1135
(76 %)
31 diff
(97.3 %id)
TI_1948131288   .d 268 to 1056 129 to 922       794/1366
(58 %)
16 diff
(98.9 %id)
TI_1948131603   .d 268 to 1197 126 to 1043       918/1139
(80 %)
37 diff
(96.8 %id)
FN139620 breast carcinoma .d 313 to 403 91 to 1     Submitted on the opposite strand 91/92
(98 %)
2 diff
(97.9 %id)
TI_1971555495   .d 522 to 1683 14 to 1162   tiling clone,   1149/1265
(90 %)
22 diff
(98.3 %id)
DA104499 cerebellum .d 723 to 1185 2 to 464   capped   463/463
(100 %)
0 diff
(100 %id)
DB094389 testis .d 1120 to 1685 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB112584 thymus .d 2028 to 2593 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA042265 bladder .d 2036 to 2594 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
CR991292 T-Lymphocytes .d 2039 to 2870 1 to 835       835/835
(100 %)
3 diff
(99.7 %id)
CR976872 T-Lymphocytes .d 2041 to 2941 1 to 897       897/899
(99 %)
8 diff
(99.2 %id)
DB103822 thymus .d 2047 to 2607 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB115192 thymus .d 2050 to 2585 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DB133017 thymus .d 2052 to 2599 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA672329   .d 2053 to 2624 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA991140 synovial membrane tissue from rheumatioidarthritis .d 2056 to 2593 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA676610   .d 2058 to 2626 2 to 571   capped   570/572
(99 %)
3 diff
(99.5 %id)
DA428987 colon .d 2059 to 2593 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA816094   .d 2059 to 2618 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA817173   .d 2059 to 2626 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA988905 synovial membrane tissue from rheumatioidarthritis .d 2059 to 2593 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DB127920 thymus .d 2059 to 2623 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA876995 Prostate .d 2062 to 2593 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DB160884 thymus .d 2062 to 2632 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA819873   .d 2065 to 2634 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA949431 Spleen .d 2067 to 2593 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
DN996973 breast cancer, Mammary gland (cancer tissue) .d 2067 to 2847 9 to 789       781/789
(98 %)
6 diff
(99.3 %id)
DA594276 lung .d 2070 to 2639 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB121058 thymus .d 2070 to 2626 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA673059   .d 2072 to 2654 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DB107165 thymus .d 2073 to 2618 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA402742 thalamus .d 2075 to 2541 2 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
DA462769   .d 2075 to 2629 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA932410 Spleen .d 2075 to 2593 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA934841 Spleen .d 2075 to 2593 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA954934 Spleen .d 2075 to 2641 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA820332 pericardium .d 2077 to 2626 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
CR998200 T-Lymphocytes .d 2077 to 2976 1 to 899       899/899
(100 %)
3 diff
(99.7 %id)
CR988924 T-Lymphocytes .d 2077 to 2869 1 to 798       798/799
(99 %)
9 diff
(98.9 %id)
DA957114 Spleen .d 2077 to 2593 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
DA971909 synovial membrane tissue from rheumatioidarthritis .d 2077 to 2593 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
BX480591   .d 2079 to 2689 12 to 623       612/623
(98 %)
7 diff
(98.9 %id)
DA672088   .d 2080 to 2677 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA678117   .d 2080 to 2669 2 to 591   capped   590/590
(100 %)
5 diff
(99.2 %id)
DB204965 trachea .d 2082 to 2635 12 to 568   capped   557/557
(100 %)
3 diff
(99.5 %id)
DA931632 Spleen .d 2084 to 2618 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DB156542 thymus .d 2084 to 2657 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA382959 thalamus .d 2085 to 2635 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
CR984354 T-Lymphocytes .d 2086 to 2793 1 to 711       711/713
(99 %)
7 diff
(99.1 %id)
BM153035 leukopheresis .d 2088 to 2387 1 to 300       300/300
(100 %)
11 diff
(96.4 %id)
BM152728 leukopheresis .d 2088 to 2662 1 to 575       575/576
(99 %)
2 diff
(99.7 %id)
DA464175   .d 2091 to 2648 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA587979 lung .d 2092 to 2626 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
BJ996321 hepatoblastoma .d 2092 to 2541 1 to 450       450/450
(100 %)
0 diff
(100 %id)
DA824006 pericardium .d 2092 to 2669 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA203567 brain .d 2093 to 2641 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA337858 hippocampus .d 2093 to 2674 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA817593   .d 2093 to 2632 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA824023 pericardium .d 2093 to 2662 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
DA928787 small intestine .d 2093 to 2618 2 to 529   capped   528/528
(100 %)
2 diff
(99.7 %id)
DA949885 Spleen .d 2093 to 2638 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA950542 Spleen .d 2093 to 2656 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA969552 stomach .d 2093 to 2662 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB124862 thymus .d 2093 to 2629 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA890494 rectum .d 2094 to 2637 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB140723 thymus .d 2094 to 2632 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
BG757935 B-cells, primary B-cells from tonsils (cell line) .d 2097 to 2945 1 to 842       842/844
(99 %)
13 diff
(98.5 %id)
BG685942 B-cells, primary B-cells from tonsils (cell line) .d 2101 to 2905 1 to 806       806/806
(100 %)
6 diff
(99.3 %id)
DB149291 thymus .d 2109 to 2680 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
CD618876   .d 2111 to 2623 1 to 512       512/512
(100 %)
2 diff
(99.7 %id)
DA940139 Spleen .d 2121 to 2618 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA972831 synovial membrane tissue from rheumatioidarthritis .d 2123 to 2683 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA463145   .d 2128 to 2678 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA944492 Spleen .d 2131 to 2699 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB247185 uterus .d 2131 to 2887 2 to 764   capped   763/763
(100 %)
8 diff
(99.0 %id)
BC064911 Testis, embryonal carcinoma .d 2132 to 3937 1 to 1806   tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1806/1879
(96 %)
1 diff
(100.0 %id)
BQ223387 embryonal carcinoma, cell line, testis .d 2133 to 2936 1 to 810   available from MGC,   810/917
(88 %)
20 diff
(97.9 %id)
DA815500   .d 2133 to 2692 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA942650 Spleen .d 2133 to 2706 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
CR988909 T-Lymphocytes .d 2134 to 2978 1 to 846       846/846
(100 %)
1 diff
(99.9 %id)
CD618879   .d 2143 to 2569 1 to 435       435/435
(100 %)
11 diff
(97.5 %id)
DB147140 thymus .d 2145 to 2721 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
CT000381 T-Lymphocytes .d 2158 to 3048 1 to 890       890/890
(100 %)
1 diff
(99.9 %id)
TI_1971555501   .d 2174 to 3283 20 to 1119       1100/1253
(87 %)
6 diff
(99.6 %id)
DA082364 cerebellum .d 2194 to 2768 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB124314 thymus .d 2198 to 2749 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BX477069   .d 2271 to 2662 1 to 392       392/392
(100 %)
7 diff
(98.3 %id)
BF974243 B-cells, primary B-cells from tonsils (cell line) .d 2291 to 2994 1 to 736       736/1163
(63 %)
19 diff
(98.4 %id)
DB136836 thymus .d 2291 to 2835 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA941864 Spleen .d 2302 to 2863 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA677295   .d 2303 to 2896 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
CT001686 T-Lymphocytes .d 2419 to 3244 1 to 826       826/826
(100 %)
1 diff
(99.9 %id)
FN103482 breast carcinoma .d 2421 to 2522 1 to 104       104/104
(100 %)
2 diff
(98.1 %id)
BF902341 marrow .d 2446 to 2877 18 to 448       431/450
(95 %)
5 diff
(98.9 %id)
DA593468 lung .d 2446 to 3029 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
BF903236 marrow .d 2450 to 2858 13 to 420       408/420
(97 %)
6 diff
(98.6 %id)
DA081078 cerebellum .d 2473 to 3031 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BG686181 B-cells, primary B-cells from tonsils (cell line) .d 2515 to 3034 281 to 803       523/805
(64 %)
9 diff
(98.9 %id)
BE831646 marrow .d 2626 to 2979 355 to 3       353/355
(99 %)
0 diff
(100 %id)
BE831661 marrow .d 2626 to 2845 226 to 1       226/226
(100 %)
6 diff
(97.4 %id)
CD618877   .d 2639 to 3211 591 to 19       573/591
(96 %)
0 diff
(100 %id)
BE831643 marrow .d 2644 to 3155 1 to 515       515/515
(100 %)
5 diff
(99.1 %id)
BE831702 marrow .d 2676 to 3065 1 to 388       388/388
(100 %)
2 diff
(99.5 %id)
CD618878   .d 2725 to 3167 451 to 6       446/451
(98 %)
0 diff
(100 %id)
BG498542 adenocarcinoma, Prostate .d 2809 to 3549 1 to 743       743/775
(95 %)
18 diff
(97.7 %id)
BG984123 colon_normal .d 2834 to 3306 483 to 11       473/483
(97 %)
2 diff
(99.6 %id)
CR988940 T-Lymphocytes .d 2852 to 3599 1 to 750       750/755
(99 %)
3 diff
(99.7 %id)
BE831648 marrow .d 2870 to 3366 500 to 4       497/502
(99 %)
2 diff
(99.7 %id)
BE831660 marrow .d 2956 to 3426 476 to 5       472/476
(99 %)
1 diff
(99.8 %id)
BG504279 embryonal carcinoma, testis .d 2984 to 3714 1 to 731       731/731
(100 %)
8 diff
(99.0 %id)
BE769625 prostate_tumor .d 2997 to 3151 1 to 159       159/162
(98 %)
8 diff
(95.1 %id)
DA815498   .d 3067 to 3628 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BU429018 lymph .d 3076 to 3525 1 to 450       450/450
(100 %)
6 diff
(98.7 %id)
CD706610 normal nasopharynx .d 3249 to 3597 37 to 383       347/383
(90 %)
10 diff
(97.4 %id)
AW075696 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .d 3400 to 3937 538 to 2       537/541
(99 %)
18 diff
(96.7 %id)
BM713009 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3410 to 3681 1 to 273   fully sequenced, Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 273/273
(100 %)
1 diff
(99.7 %id)
AI656680 pooled germ cell tumors .d 3476 to 3937 476 to 15   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 464/477
(97 %)
2 diff
(99.6 %id)
BF197573 Kidney .d 3496 to 3937 446 to 5       443/455
(97 %)
15 diff
(96.8 %id)
BM676203 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3651 to 3937 306 to 19   fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 290/308
(94 %)
4 diff
(98.8 %id)
FN058562 breast carcinoma .d 3666 to 3747 82 to 1     Submitted on the opposite strand 82/82
(100 %)
0 diff
(100 %id)
AA811442 germinal center B cell .d 3782 to 3916 135 to 1       135/136
(99 %)
5 diff
(96.4 %id)
BQ028111 mixed .d 4295 to 4914 638 to 19   AAA   620/620
(100 %)
4 diff
(99.4 %id)
N38840 multiple sclerosis lesions .d 4410 to 4908 505 to 1       505/505
(100 %)
13 diff
(97.5 %id)
AW469849 lymph node, lymphoma, follicular mixed small and largecell .d 4428 to 4740 313 to 1       313/313
(100 %)
5 diff
(98.5 %id)
AA493180 colon .d 4431 to 4920 487 to 1       487/487
(100 %)
10 diff
(98.0 %id)
AA765861 germinal center B cell .d 4432 to 4740 308 to 1       308/308
(100 %)
4 diff
(98.8 %id)
BF174592 blood .d 4433 to 4719 1 to 274       274/274
(100 %)
18 diff
(93.5 %id)
R07049 liver and spleen .d 4458 to 4674 1 to 221   fully sequenced,   221/221
(100 %)
3 diff
(98.7 %id)
AI817909 anaplastic oligodendroglioma, brain .d 4458 to 4917 486 to 1       486/486
(100 %)
46 diff
(90.6 %id)
DB350765 uterus .d 4458 to 4919 465 to 1       465/465
(100 %)
13 diff
(97.3 %id)
BQ181412 Knee, Osteoarthritic Cartilage .d 4472 to 4908 449 to 17   AAA   433/436
(99 %)
5 diff
(98.9 %id)
AW518061 lymph node, lymphoma, follicular mixed small and largecell .d 4473 to 4740 268 to 1       268/268
(100 %)
3 diff
(98.9 %id)
N22522 nose, olfactory epithelium .d 4493 to 4920 441 to 3       439/441
(99 %)
0 diff
(100 %id)
BM151069 leukopheresis .d 4494 to 4922 445 to 17   AAA   429/433
(99 %)
6 diff
(98.7 %id)
AI253583 Prostate .d 4497 to 4906 409 to 1       409/409
(100 %)
4 diff
(99.1 %id)
TI_57163635   .d 4518 to 4925 35 to 442   tiling clone, AAA   408/442
(92 %)
6 diff
(98.7 %id)
BI836080 pooled pancreas and spleen .d 4521 to 4925 1 to 405   AAA   405/405
(100 %)
0 diff
(100 %id)
BI490106 pooled brain, lung, testis .d 4523 to 5339 1 to 823       823/826
(99 %)
6 diff
(99.3 %id)
TI_43961073   .d 4523 to 5339 100 to 922       823/925
(88 %)
6 diff
(99.4 %id)
BE466809 pooled germ cell tumors .d 4526 to 4920 395 to 1       395/395
(100 %)
2 diff
(99.5 %id)
BQ220778 embryonal carcinoma, cell line, testis .d 4568 to 4919 1 to 350   AAA   350/350
(100 %)
2 diff
(99.5 %id)
AW139914   .d 4576 to 4914 356 to 18   AAA   339/345
(98 %)
5 diff
(98.6 %id)
CA443698 lung, Metastatic Chondrosarcoma .d 4615 to 4921 323 to 17   AAA   307/307
(100 %)
4 diff
(98.7 %id)
AA883417 pooled .d 4637 to 4916 279 to 1       279/279
(100 %)
4 diff
(98.6 %id)
BF222785 pooled germ cell tumors .d 4639 to 4920 282 to 1       282/282
(100 %)
1 diff
(99.7 %id)
R07013 liver and spleen .d 4644 to 4873 232 to 1   fully sequenced,   232/232
(100 %)
3 diff
(98.8 %id)
FN064577 breast carcinoma .d 4697 to 4784 1 to 89       89/90
(98 %)
3 diff
(96.7 %id)
AI341499 pooled germ cell tumors .d 4723 to 4920 198 to 1       198/200
(99 %)
2 diff
(99.0 %id)
AA765876 germinal center B cell .d 4757 to 4909 153 to 1       153/153
(100 %)
0 diff
(100 %id)
BM193617 leukopheresis .d 4766 to 4914 166 to 17   AAA   150/150
(100 %)
14 diff
(90.7 %id)
FN057737 breast carcinoma .d 4820 to 4891 1 to 72       72/72
(100 %)
0 diff
(100 %id)
FN061679 breast carcinoma .d 4820 to 4887 1 to 68       68/70
(97 %)
1 diff
(98.6 %id)
FN159785 breast carcinoma .d 4821 to 4888 1 to 67       67/67
(100 %)
3 diff
(95.6 %id)
FN060206 breast carcinoma .d 4823 to 4888 1 to 67       67/67
(100 %)
2 diff
(97.1 %id)
DB157309 thymus .d 4916 to 5483 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
AI831990 lymph node, lymphoma, follicular mixed small and largecell .d 4981 to 5423 444 to 1       444/444
(100 %)
2 diff
(99.6 %id)
BX370607   .d 4996 to 5659 1 to 666       666/676
(98 %)
43 diff
(93.7 %id)
AW002286 thymus, pooled .d 5002 to 5423 423 to 2       422/423
(99 %)
0 diff
(100 %id)
AW504584 lymph .d 5138 to 5621 8 to 491       484/491
(98 %)
5 diff
(99.0 %id)
TI_154160840   .d 5138 to 5706 85 to 653       569/569
(100 %)
1 diff
(99.9 %id)
AI625534 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 5179 to 5420 242 to 1       242/242
(100 %)
10 diff
(95.9 %id)
AW590972 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 5188 to 5597 411 to 2       410/411
(99 %)
0 diff
(100 %id)
TI_2016730277   .d 5190 to 6273 60 to 1142       1083/1142
(94 %)
6 diff
(99.5 %id)
AW510422 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 5234 to 5597 365 to 2       364/365
(99 %)
0 diff
(100 %id)
DB125791 thymus .d 5421 to 5986 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
TI_227713291   .d 5512 to 6385 945 to 77   tiling clone, AAA   869/992
(87 %)
13 diff
(98.7 %id)
AL109774   .d 5746 to 6380 1 to 635   AAA   635/635
(100 %)
0 diff
(100 %id)
DA226927 brain .d 5813 to 6378 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
AI079472 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 5973 to 6382 410 to 1       410/410
(100 %)
0 diff
(100 %id)
BY799448 eye .d 6568 to 7175 1 to 608       608/608
(100 %)
0 diff
(100 %id)
BX350574   .d 6783 to 7677 900 to 8       893/903
(98 %)
0 diff
(100 %id)
BQ897936 dorsal root ganglia .d 6917 to 7834 1 to 918   tiling clone,   918/918
(100 %)
3 diff
(99.7 %id)
DB163902 thymus .d 7126 to 7723 2 to 600   capped   599/599
(100 %)
1 diff
(99.9 %id)
BG958841 colon .d 7326 to 7662 9 to 343       335/343
(97 %)
6 diff
(98.3 %id)
AL582118 B cells from Burkitt lymphoma .d 7516 to 8548 1030 to 1       1030/1030
(100 %)
7 diff
(99.4 %id)
BQ339968 nervous_normal .d 7605 to 8097 497 to 4       494/497
(99 %)
0 diff
(100 %id)
BX509083   .d 7673 to 8250 1 to 578       578/578
(100 %)
3 diff
(99.5 %id)
W92112 liver and spleen .d 7698 to 8280 1 to 592   fully sequenced,   592/592
(100 %)
16 diff
(97.3 %id)
BF943011 nervous_normal .d 7723 to 8112 393 to 6   tiling clone, Submitted on the opposite strand 388/393
(98 %)
0 diff
(100 %id)
DA056471 cerebellum .d 8259 to 8860 2 to 601   capped   600/600
(100 %)
3 diff
(99.5 %id)
W91983 liver and spleen .d 8262 to 8547 290 to 1   fully sequenced,   290/290
(100 %)
9 diff
(96.9 %id)
BX110752 whole brain .d 8398 to 8923 1 to 525       525/525
(100 %)
4 diff
(99.3 %id)
AA229752   .d 8452 to 8954 1 to 502   tiling clone,   502/511
(98 %)
4 diff
(99.3 %id)
EL594959 epidermis, skin .d 8615 to 8926 11 to 322       312/339
(92 %)
6 diff
(98.3 %id)
AK126222 thymus .e 1 to 3166 2 to 3164 S332I I333R R334Q Q335R R336I ... tiling clone, available from FLJ,   3164/3164
(100 %)
7 diff
(99.8 %id)
AK128740 testis .f 1 to 3774 2 to 3775   tiling clone, available from FLJ,   3775/3775
(100 %)
0 diff
(100 %id)
DA296634 hippocampus .f 1313 to 1897 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
CR985070 T-Lymphocytes .f 3570 to 4059 1 to 491   tiling clone,   491/491
(100 %)
1 diff
(99.8 %id)
DA239717 brain .g 1 to 586 2 to 587   tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
AK124725 brain .g 292 to 2449 1 to 2158   tiling clone, available from FLJ,   2158/2183
(98 %)
2 diff
(100.0 %id)
DA207786 brain .g 293 to 870 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA098988 cerebellum .g 294 to 850 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA233899 brain .g 294 to 877 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA122633 cerebellum .g 383 to 912 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA096074 cerebellum .g 413 to 976 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
TI_1971555499   .g 1541 to 2578 13 to 1049   tiling clone,   1037/1250
(82 %)
16 diff
(98.8 %id)
DB304263 brain .g 1930 to 2449 546 to 26       521/546
(95 %)
0 diff
(100 %id)
DA816725   .g 2337 to 2892 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
NM_004513.5   .h 1 to 6076 2 to 6077 exact RefSeq,   6077/6077
(100 %)
1 diff
(100.0 %id)
DB141707 thymus .h 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
DA818185   .i 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
BQ221017 embryonal carcinoma, cell line, testis .i 6 to 448 1 to 445       445/1334
(33 %)
17 diff
(98.8 %id)
BC050362 Testis, embryonal carcinoma .i 41 to 1921 1 to 1881 exact tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1881/1904
(98 %)
1 diff
(100.0 %id)
BQ224666 embryonal carcinoma, cell line, testis .i 44 to 572 1 to 537   available from MGC,   537/1211
(44 %)
23 diff
(98.2 %id)
CR749286 esophagus tumor .j 1 to 5119 1 to 5119 S73G R156* tiling clone, available from DKFZ, AAA   5119/5119
(100 %)
9 diff
(99.9 %id)
TI_1971554093   .j 64 to 1110 87 to 1125   tiling clone,   1041/1284
(81 %)
22 diff
(98.3 %id)
DB135994 thymus .j 1938 to 2481 2 to 545   capped   544/548
(99 %)
3 diff
(99.5 %id)
DB138041 thymus .j 1961 to 2499 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DA928052 small intestine .j 2241 to 2810 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BQ059496 lymph, lymphoma, cell line .j 2459 to 3221 1 to 783   tiling clone,   783/1056
(74 %)
27 diff
(97.5 %id)
BG685619 B-cells, primary B-cells from tonsils (cell line) .j 2508 to 3297 1 to 804       804/809
(99 %)
26 diff
(96.8 %id)
DA673134   .j 2721 to 3194 2 to 475   capped   474/474
(100 %)
0 diff
(100 %id)
U82972   .j 2745 to 4820 1 to 2076   tiling clone,   2076/2076
(100 %)
6 diff
(99.8 %id)
BX436325 thymus .j 2779 to 3831 1 to 1043   tiling clone,   1043/1047
(99 %)
31 diff
(97.1 %id)
BG745503 Spleen .j 2779 to 3340 1 to 558       558/558
(100 %)
5 diff
(99.2 %id)
S81601   .j 3653 to 4820 9 to 1176       1168/1176
(99 %)
9 diff
(99.3 %id)
BG754119 B-cells, primary B-cells from tonsils (cell line) .j 4121 to 4754 1 to 634   tiling clone,   634/636
(99 %)
2 diff
(99.7 %id)
BM920155 pooled pancreas and spleen .j 4152 to 5113 9 to 975       967/1086
(89 %)
22 diff
(98.0 %id)
BG745905 Spleen .j 4235 to 5066 835 to 1       835/851
(98 %)
30 diff
(96.5 %id)
BX116648 liver and spleen .j 4259 to 5025 1 to 767       767/767
(100 %)
5 diff
(99.4 %id)
H57531 liver and spleen .j 4259 to 4646 13 to 404       392/481
(81 %)
11 diff
(97.8 %id)
BX436324 thymus .j 4309 to 5118 813 to 1       813/813
(100 %)
44 diff
(94.6 %id)
BI834478 pooled pancreas and spleen .j 4360 to 5077 1 to 725       725/736
(98 %)
20 diff
(97.3 %id)
TI_57164115   .j 4360 to 5077 39 to 763       725/774
(93 %)
23 diff
(97.1 %id)
BQ183674 Knee, Osteoarthritic Cartilage .j 4403 to 5112 727 to 19   AAA   709/709
(100 %)
4 diff
(99.5 %id)
AF053412   .j 4428 to 4820 1 to 393       393/393
(100 %)
3 diff
(99.3 %id)
BQ065138 lymph, lymphoma, cell line .j 4441 to 5112 1 to 672   AAA   672/672
(100 %)
1 diff
(99.9 %id)
AI684863 pooled .j 4473 to 5102 640 to 11       630/649
(97 %)
8 diff
(98.8 %id)
AW467967 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .j 4476 to 4938 463 to 1       463/463
(100 %)
10 diff
(97.9 %id)
AW514726 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .j 4497 to 4938 442 to 1       442/442
(100 %)
11 diff
(97.6 %id)
AW152021 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .j 4502 to 5113 612 to 1       612/638
(95 %)
29 diff
(95.5 %id)
AI434541 lymph node, lymphoma, follicular mixed small and largecell .j 4524 to 4938 407 to 1       407/407
(100 %)
19 diff
(95.4 %id)
AW085515 pooled .j 4524 to 5118 596 to 2       595/596
(99 %)
18 diff
(97.0 %id)
AI655333 pooled germ cell tumors .j 4530 to 5107 578 to 1       578/578
(100 %)
11 diff
(98.1 %id)
DB344994 thymus .j 4553 to 5106 556 to 1       556/566
(98 %)
3 diff
(99.5 %id)
BI906848 leukocyte .j 4563 to 5106 1 to 544   AAA   544/544
(100 %)
1 diff
(99.9 %id)
TI_57233320   .j 4563 to 5106 44 to 587   AAA   544/587
(92 %)
7 diff
(98.9 %id)
AA481127 germinal center B cell .j 4567 to 4939 1 to 369   fully sequenced,   369/369
(100 %)
10 diff
(97.3 %id)
AI814130 normal prostate, Prostate .j 4569 to 5103 545 to 11       535/545
(98 %)
0 diff
(100 %id)
CT002647 T-Lymphocytes .j 4572 to 5106 1 to 535   AAA   535/535
(100 %)
1 diff
(99.9 %id)
AW768471 lymph node, lymphoma, follicular mixed small and largecell .j 4611 to 4938 325 to 1       325/325
(100 %)
4 diff
(98.8 %id)
AA481070 germinal center B cell .j 4668 to 4815 148 to 1   fully sequenced,   148/148
(100 %)
4 diff
(97.3 %id)
H57532 liver and spleen .j 4692 to 5113 425 to 3       423/425
(99 %)
0 diff
(100 %id)
BI825110 pooled brain, lung, testis .k 1 to 733 1 to 740   tiling clone, available from MGC,   740/740
(100 %)
11 diff
(98.6 %id)
TI_57202359   .k 1 to 733 1 to 740       740/740
(100 %)
11 diff
(98.6 %id)
BC040272 Brain, Lung, Testis, adult, pooled whole .k 5 to 2829 1 to 2825 P481S tiling clone, available from MGC, AAA   2825/2825
(100 %)
8 diff
(99.8 %id)
DB278403 uterus .k 125 to 604 2 to 482   capped   481/481
(100 %)
1 diff
(99.8 %id)
TI_1948131289   .k 674 to 1614 1063 to 128       936/1186
(78 %)
20 diff
(98.4 %id)
TI_1948130963   .k 675 to 1614 1059 to 128       932/1189
(78 %)
22 diff
(98.2 %id)
TI_1948131606   .k 682 to 1614 1048 to 128       921/1180
(78 %)
29 diff
(97.6 %id)
TI_1948130630   .k 864 to 1614 881 to 130       752/1165
(64 %)
8 diff
(99.4 %id)
TI_154148908   .l 1 to 706 60 to 757   tiling clone,   698/707
(98 %)
37 diff
(94.8 %id)
TI_154150014   .l 1 to 563 81 to 643   tiling clone,   563/800
(70 %)
14 diff
(98.3 %id)
BG686727 B-cells, primary B-cells from tonsils (cell line) .l 337 to 1117 1 to 782   tiling clone,   782/782
(100 %)
4 diff
(99.5 %id)
AA293249 ovarian tumor, ovary .m 1 to 421 1 to 417   tiling clone,   417/421
(99 %)
5 diff
(98.9 %id)
AA425715 ovarian tumor, ovary .m 1 to 525 1 to 524   tiling clone,   524/524
(100 %)
11 diff
(98.0 %id)
AA454784 ovarian tumor, ovary .m 20 to 501 23 to 502   tiling clone, fully sequenced,   480/502
(95 %)
7 diff
(98.7 %id)
AA454732 ovarian tumor, ovary .m 471 to 1035 564 to 1   tiling clone, fully sequenced,   564/564
(100 %)
7 diff
(98.8 %id)
AA426540 ovarian tumor, ovary .m 539 to 1035 497 to 1   tiling clone,   497/498
(99 %)
6 diff
(98.8 %id)
DB123613 thymus .n 1 to 620 7 to 626 exact tiling clone, capped   625/625
(100 %)
0 diff
(100 %id)
DA819597   .n 14 to 587 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DC411038 thymus .o 1 to 519 1 to 519 exact tiling clone,   519/519
(100 %)
0 diff
(100 %id)
BE816437 breast_normal .p-u 1 to 442 450 to 1   tiling clone,   450/450
(100 %)
17 diff
(96.3 %id)
BE816447 breast_normal .p-u 8 to 452 452 to 4       449/452
(99 %)
0 diff
(100 %id)
BE816445 breast_normal .p-u 28 to 419 392 to 2   tiling clone,   391/392
(99 %)
0 diff
(100 %id)
DA938877 Spleen .p-u 213 to 793 2 to 582   tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
AL597935   .p-u 524 to 955 1 to 432       432/432
(100 %)
1 diff
(99.8 %id)
BG236192 blood, lymphocyte .p-u 694 to 1111 1 to 418   tiling clone, Submitted on the opposite strand 418/428
(97 %)
2 diff
(99.6 %id)
DB136313 thymus .p-u 951 to 1423 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
BF974121 B-cells, primary B-cells from tonsils (cell line) .p-u 1003 to 1488 1 to 499       499/1013
(49 %)
43 diff
(95.8 %id)
BG758465 B-cells, primary B-cells from tonsils (cell line) .p-u 1003 to 1804 1 to 806   tiling clone,   806/807
(99 %)
12 diff
(98.6 %id)
BM992488 lung, Metastatic Chondrosarcoma .p-u 1186 to 1853 686 to 19   AAA   668/668
(100 %)
1 diff
(99.9 %id)
AW504285 lymph .p-u 1267 to 1738 8 to 479       472/479
(98 %)
6 diff
(98.8 %id)
TI_154160402   .p-u 1267 to 1815 86 to 634       549/549
(100 %)
1 diff
(99.9 %id)
CB267267 adipose .p-u 1332 to 1629 1 to 301       301/301
(100 %)
15 diff
(95.1 %id)
BX117805 lymph node, lymphoma, follicular mixed small and largecell .p-u 1391 to 1853 478 to 15   AAA   464/464
(100 %)
1 diff
(99.8 %id)
AI434914 lymph node, lymphoma, follicular mixed small and largecell .p-u 1414 to 1854 440 to 1       440/440
(100 %)
5 diff
(98.9 %id)
AA837266 germinal center B cell .p-u 1416 to 1854 449 to 11       439/449
(97 %)
0 diff
(100 %id)
AA872573 germinal center B cell .p-u 1442 to 1868 448 to 22   tiling clone, AAA   427/427
(100 %)
0 diff
(100 %id)
AI660026 thymus, pooled .p-u 1534 to 1852 319 to 1       319/319
(100 %)
0 diff
(100 %id)
AI300782 2 pooled tumors (clear cell type), Kidney .p-u 1537 to 1869 335 to 3       333/335
(99 %)
0 diff
(100 %id)
BF976728 B-cells, primary B-cells from tonsils (cell line) .p-u 1646 to 1790 658 to 799       767/818
(93 %)
22 diff
(97.4 %id)
DA248496 brain .p-u 1817 to 2363 2 to 548   tiling clone, capped   547/547
(100 %)
1 diff
(99.9 %id)
AI580343 Kidney .q 1 to 398 1 to 400   tiling clone, Submitted on the opposite strand 400/400
(100 %)
3 diff
(99.3 %id)
AI457472 carcinoid, lung .q 143 to 627 1 to 485     Submitted on the opposite strand 485/485
(100 %)
0 diff
(100 %id)
AI690218 carcinoid, lung .q 143 to 607 1 to 465     Submitted on the opposite strand 465/465
(100 %)
1 diff
(99.8 %id)
T86411 liver and spleen .q 156 to 467 11 to 324     Submitted on the opposite strand 314/328
(95 %)
9 diff
(97.3 %id)
BX095527 liver and spleen .q 278 to 1025 748 to 1   tiling clone, Submitted on the opposite strand 748/748
(100 %)
2 diff
(99.8 %id)
AA203259 liver and spleen .q 387 to 1024 628 to 1     Submitted on the opposite strand 628/871
(72 %)
15 diff
(98.3 %id)
T86501 liver and spleen .q 701 to 1024 322 to 1     Submitted on the opposite strand 322/322
(100 %)
7 diff
(97.9 %id)
DA818707   .q 953 to 1512 2 to 561 exact tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
CR989710 T-Lymphocytes .r-u 1 to 876 9 to 886 exact tiling clone,   886/887
(99 %)
8 diff
(99.1 %id)
AA782004   .s-u 1 to 402 1 to 402   tiling clone, Submitted on the opposite strand 402/402
(100 %)
0 diff
(100 %id)
DA108036 cerebellum .s-u 67 to 627 2 to 562 exact tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DA084806 cerebellum .t-u 1 to 293 2 to 294 exact tiling clone, capped   293/293
(100 %)
0 diff
(100 %id)
CF144293 lymph .u-u 1 to 266 8 to 273 K2L E36* tiling clone,   266/273
(97 %)
6 diff
(97.9 %id)
AK124565 cerebellum Gene IL16, variant not shown       available from FLJ, This clone was ignored    
AK303659 thymus Gene IL16, variant not shown         Suspected internal deletion, this clone was ignored    
AK308440 uterus Gene IL16, variant not shown         Suspected internal deletion, this clone was ignored    
DA094704 cerebellum Gene IL16, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB298819 cerebellum Gene IL16, variant not shown         Suspected internal deletion, this clone was ignored    
DA097505 cerebellum Gene IL16, variant not shown       capped Suspected internal deletion, this clone was ignored    
FJ032370   Gene IL16, variant not shown         This clone was ignored    
BP262340 small intestine Gene IL16, variant not shown         Suspected internal deletion, this clone was ignored    
AI652705 pooled germ cell tumors Gene IL16, variant not shown         This clone was ignored    
BE552233 pooled germ cell tumors Gene IL16, variant not shown         This clone was ignored    
M90391 peripheral blood Gene IL16, variant not shown         This clone was ignored    
BP307152   Gene IL16, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948131604   Gene IL16, variant not shown         This clone was ignored    
DA966974 stomach Gene IL16, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB155052 thymus Gene IL16, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB155071 thymus Gene IL16, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p-u, .q, .r-u, .s-u, .t-u, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI