cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
BC069427 | PCR rescued clones | .a-u | 20 to 653 | 1 to 634 | exact | tiling clone, available from MGC, | 634/634 (100 %) | 1 diff (99.9 %id) | |
BC093988 | Brain, cerebellum, PCR rescued clones | .a-u | 29 to 705 | 1 to 677 | exact | 677/677 (100 %) | 0 diff (100 %id) | ||
BC112002 | Brain, cerebellum, PCR rescued clones | .a-u | 29 to 705 | 1 to 677 | exact | 677/677 (100 %) | 0 diff (100 %id) | ||
TI_891528331 | .a-u | 28 to 705 | 44 to 721 | exact | tiling clone, | 678/1197 (56 %) | 1 diff (100.0 %id) | ||
TI_891528335 | .a-u | 28 to 705 | 46 to 723 | exact | 678/1220 (55 %) | 1 diff (100.0 %id) | |||
TI_891528339 | .a-u | 28 to 705 | 736 to 59 | exact | 678/1253 (54 %) | 0 diff (100 %id) | |||
TI_891528343 | .a-u | 28 to 705 | 746 to 69 | exact | 678/1237 (54 %) | 0 diff (100 %id) | |||
TI_1242414902 | .a-u | 28 to 705 | 46 to 723 | exact | 678/1203 (56 %) | 1 diff (100.0 %id) | |||
TI_1242414904 | .a-u | 28 to 705 | 45 to 722 | exact | 678/1226 (55 %) | 1 diff (100.0 %id) | |||
TI_1242414906 | .a-u | 28 to 705 | 746 to 69 | exact | 678/1271 (53 %) | 0 diff (100 %id) | |||
TI_1242414908 | .a-u | 28 to 705 | 745 to 68 | exact | 678/1238 (54 %) | 0 diff (100 %id) | |||
EL736221. matches multiple genes | mixed | .a-u | 70 to 638 | 1 to 569 | also hits gene IFNA1 | 569/584 (97 %) | 2 diff (99.7 %id) | ||
NM_006900.3 | .a-u | 1 to 705 | 1 to 705 | exact | RefSeq, | 705/705 (100 %) | 0 diff (100 %id) | ||
TI_1948227306. matches multiple genes | .a-u | 70 to 538 | 129 to 597 | also hits gene IFNA1 | 469/496 (94 %) | 6 diff (98.8 %id) | |||
TI_1948227308. matches multiple genes | .a-u | 247 to 638 | 519 to 128 | also hits gene IFNA1 | 392/419 (93 %) | 0 diff (100 %id) | |||
TI_1948227595. matches multiple genes | .a-u | 70 to 567 | 127 to 623 | also hits gene IFNA1 | 497/524 (94 %) | 6 diff (98.9 %id) | |||
TI_1948227596. matches multiple genes | .a-u | 70 to 546 | 124 to 599 | also hits gene IFNA1 | 476/503 (94 %) | 6 diff (98.9 %id) | |||
TI_1948227597. matches multiple genes | .a-u | 187 to 638 | 574 to 123 | also hits gene IFNA1 | 452/479 (94 %) | 0 diff (100 %id) | |||
TI_1948227598. matches multiple genes | .a-u | 272 to 638 | 494 to 128 | also hits gene IFNA1 | 367/394 (93 %) | 0 diff (100 %id) | |||
TI_1948227894. matches multiple genes | .a-u | 70 to 636 | 125 to 693 | also hits gene IFNA1 | 569/1432 (39 %) | 34 diff (97.7 %id) | |||
TI_1948227895. matches multiple genes | .a-u | 70 to 622 | 132 to 683 | also hits gene IFNA1 | 552/581 (95 %) | 6 diff (99.0 %id) | |||
TI_1948228186. matches multiple genes | .a-u | 70 to 636 | 122 to 694 | also hits gene IFNA1 | 573/1455 (39 %) | 29 diff (98.1 %id) | |||
TI_1948228188. matches multiple genes | .a-u | 163 to 638 | 604 to 129 | also hits gene IFNA1 | 476/503 (94 %) | 0 diff (100 %id) | |||
TI_1948227307. matches multiple genes | Gene IFNA1, variant not shown | This clone was ignored, also hits gene IFNA1 | |||||||
TI_1948227307. matches multiple genes | Gene IFNA13, variant not shown | This clone was ignored, also hits gene IFNA1 |