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Gene IFI35TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
209 supporting clones for gene IFI35 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG490211 large cell carcinoma, lung .a 1 to 620 1 to 617   tiling clone,   617/617
(100 %)
11 diff
(98.3 %id)
AA026992 heart .a 3 to 201 1 to 200       200/200
(100 %)
9 diff
(95.5 %id)
BM748764 stomach .a 7 to 648 1 to 642   tiling clone,   642/642
(100 %)
5 diff
(99.3 %id)
NM_005533.3   .a 14 to 1235 1 to 1222 M128V RefSeq, AAA   1222/1222
(100 %)
1 diff
(100.0 %id)
BM857058 stomach .a 14 to 463 1 to 451       451/451
(100 %)
1 diff
(99.8 %id)
BP356084   .a 17 to 592 1 to 577       577/582
(99 %)
3 diff
(99.5 %id)
CB138771 Liver .a 21 to 296 1 to 276       276/276
(100 %)
0 diff
(100 %id)
BP217355 corpus callosum .a 23 to 595 1 to 572       572/582
(98 %)
9 diff
(98.5 %id)
BX957004   .a 26 to 662 1 to 637       637/637
(100 %)
2 diff
(99.7 %id)
BF701510 brain, primitive neuroectoderm .a 27 to 592 1 to 565       565/931
(60 %)
6 diff
(99.4 %id)
CB110077 Liver .a 27 to 543 1 to 517       517/517
(100 %)
0 diff
(100 %id)
FN070454 breast carcinoma .a 29 to 115 86 to 1     Submitted on the opposite strand 86/86
(100 %)
1 diff
(98.9 %id)
BP332253 renal proximal tubule .a 29 to 610 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BQ220477 melanotic melanoma, skin .a 31 to 877 1 to 851       851/897
(94 %)
17 diff
(98.2 %id)
BE739229 hypernephroma, Kidney .a 33 to 687 1 to 647       647/862
(75 %)
15 diff
(98.3 %id)
BP315498 mammary gland .a 33 to 614 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BM542212 melanotic melanoma, skin .a 35 to 536 47 to 548       502/1061
(47 %)
38 diff
(96.5 %id)
BG339321 leiomyosarcoma cell line, uterus .a 38 to 854 1 to 821       819/924
(88 %)
25 diff
(97.3 %id)
BF106255 lung .a 39 to 216 1 to 180       180/180
(100 %)
2 diff
(98.9 %id)
BM556210 amelanotic melanoma, cell line, skin .a 39 to 776 1 to 742       742/1103
(67 %)
17 diff
(98.5 %id)
BQ052205 blood, natural killer cells, cell line .a 39 to 883 5 to 852       848/1073
(79 %)
12 diff
(98.9 %id)
BM824192 Ascites, stomach .a 44 to 639 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
BP351684   .a 45 to 648 1 to 604       604/604
(100 %)
3 diff
(99.6 %id)
CB124863 Liver .a 47 to 657 1 to 610       610/610
(100 %)
3 diff
(99.6 %id)
BP318431 pericardium .a 47 to 627 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AA102300 colon, tumor .a 48 to 477 1 to 444       444/526
(84 %)
23 diff
(95.7 %id)
BQ709149 Spleen .a 49 to 883 1 to 836       836/934
(89 %)
28 diff
(97.1 %id)
BQ921917 leiomyosarcoma, uterus .a 49 to 856 1 to 813       813/948
(85 %)
15 diff
(98.5 %id)
CF453512 peripheral nervous system .a 50 to 774 34 to 758       725/758
(95 %)
7 diff
(99.1 %id)
BM796448 Ascites, stomach .a 51 to 475 1 to 425       425/425
(100 %)
6 diff
(98.6 %id)
BM826678 Ascites, stomach .a 53 to 579 1 to 527       527/527
(100 %)
2 diff
(99.7 %id)
BE276005 melanotic melanoma, skin .a 54 to 703 37 to 689       650/689
(94 %)
14 diff
(98.0 %id)
BM824284 Ascites, stomach .a 57 to 612 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
AA025581 heart .a 59 to 349 1 to 293       291/293
(99 %)
7 diff
(97.7 %id)
U17533   .a 59 to 138 82 to 3       80/83
(96 %)
0 diff
(100 %id)
BQ052470 blood, natural killer cells, cell line .a 61 to 1014 1 to 958       958/1073
(89 %)
23 diff
(97.9 %id)
BM694533 eye, RPE and Choroid .a 69 to 433 1 to 366       366/366
(100 %)
2 diff
(99.5 %id)
BM716146 eye, RPE and Choroid .a 69 to 768 1 to 701   fully sequenced,   701/701
(100 %)
4 diff
(99.5 %id)
TI_151769601   .a 69 to 540 105 to 589       485/911
(53 %)
20 diff
(97.9 %id)
BC001356 Skin, melanotic melanoma. .a 70 to 1232 1 to 1163 M128V tiling clone, available from MGC, AAA   1163/1163
(100 %)
2 diff
(99.9 %id)
CR743969 pooled .a 75 to 508 5 to 438       434/438
(99 %)
6 diff
(98.7 %id)
BG763180 melanotic melanoma, high MDR (cell line), skin .a 75 to 426 1 to 353       353/652
(54 %)
2 diff
(99.7 %id)
BE408888 choriocarcinoma, placenta .a 78 to 737 1 to 661       661/666
(99 %)
9 diff
(98.7 %id)
BM707614 eye, RPE and Choroid .a 83 to 642 1 to 560       560/564
(99 %)
2 diff
(99.7 %id)
AA195767 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 89 to 540 19 to 472       454/474
(95 %)
8 diff
(98.4 %id)
BE276568 melanotic melanoma, skin .a 89 to 544 1 to 456       456/456
(100 %)
0 diff
(100 %id)
BE276643 melanotic melanoma, skin .a 89 to 703 1 to 614       614/614
(100 %)
3 diff
(99.6 %id)
BE276573 melanotic melanoma, skin .a 89 to 536 1 to 448       448/449
(99 %)
1 diff
(99.8 %id)
BU145585 ductal carcinoma, cell line, Pancreas .a 91 to 882 30 to 824       795/944
(84 %)
11 diff
(98.9 %id)
AA332048 Embryo, 8 weeks .a 92 to 331 1 to 242       242/242
(100 %)
2 diff
(99.2 %id)
BQ220973 melanotic melanoma, skin .a 93 to 617 1 to 529       529/987
(53 %)
13 diff
(98.7 %id)
BQ897137 ductal carcinoma, cell line, Pancreas .a 94 to 889 1 to 800       800/912
(87 %)
11 diff
(98.8 %id)
BQ689583 ductal carcinoma, cell line, Pancreas .a 94 to 850 1 to 766       766/857
(89 %)
18 diff
(97.9 %id)
BG478858 melanotic melanoma, skin .a 99 to 884 1 to 794       794/915
(86 %)
12 diff
(98.7 %id)
BQ051574 blood, natural killer cells, cell line .a 104 to 1005 1 to 903       903/923
(97 %)
16 diff
(98.3 %id)
AA115661 colon, tumor .a 105 to 287 1 to 184       184/184
(100 %)
2 diff
(99.0 %id)
BM917187 blood, natural killer cells, cell line .a 105 to 889 1 to 788       788/1128
(69 %)
14 diff
(98.8 %id)
BE389197 endometrium, adenocarcinoma cell line, uterus .a 116 to 653 1 to 540       540/540
(100 %)
3 diff
(99.5 %id)
BF025679 melanotic melanoma, skin .a 118 to 872 1 to 750       752/750
(100 %)
19 diff
(97.5 %id)
BF026268 melanotic melanoma, skin .a 118 to 883 1 to 762       762/939
(81 %)
32 diff
(96.6 %id)
BE384683 melanotic melanoma, skin .a 119 to 696 1 to 579       579/582
(99 %)
5 diff
(99.2 %id)
BE383727 melanotic melanoma, skin .a 120 to 687 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
H27116 breast .a 126 to 359 1 to 234       234/234
(100 %)
2 diff
(99.2 %id)
CR997420 T-Lymphocytes .a 155 to 827 1 to 673       673/679
(99 %)
4 diff
(99.5 %id)
BE893809 melanotic melanoma, skin .a 165 to 823 1 to 657       657/657
(100 %)
5 diff
(99.3 %id)
BF381334 uterus_tumor .a 187 to 412 263 to 33       231/271
(85 %)
4 diff
(98.6 %id)
U72882   .a 210 to 1232 1 to 1058 L19P K20P M21S R22T L23P ... AAA   1037/1058
(98 %)
12 diff
(98.9 %id)
BU589531 mixed (pool of 40 RNAs) .a 274 to 1016 18 to 763       746/906
(82 %)
17 diff
(98.2 %id)
BM050205 epithelioid carcinoma cell line, Pancreas .a 282 to 976 1 to 698       698/707
(98 %)
9 diff
(98.8 %id)
BE739495 hypernephroma, Kidney .a 333 to 1217 891 to 7       885/1207
(73 %)
28 diff
(97.7 %id)
AK025406 colon mucosa .a 392 to 1232 1 to 841   available from FLJ, AAA   841/841
(100 %)
4 diff
(99.6 %id)
BP224090 colon mucosa .a 393 to 990 1 to 603       603/606
(99 %)
12 diff
(98.1 %id)
BU158893 large cell carcinoma, lung .a 401 to 972 107 to 678       572/1030
(55 %)
20 diff
(98.1 %id)
TI_149301573   .a 411 to 1232 898 to 83   AAA   816/948
(86 %)
10 diff
(99.0 %id)
AI376744   .a 451 to 1231 789 to 9       781/796
(98 %)
28 diff
(96.5 %id)
BM979995 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 473 to 1232 777 to 19   AAA   759/765
(99 %)
7 diff
(99.1 %id)
CA309005 Alveolar Macrophage, lung .a 473 to 1232 777 to 19   AAA   759/765
(99 %)
7 diff
(99.1 %id)
CD370369 Alveolar Macrophage, lung .a 473 to 1231 776 to 19   AAA   758/763
(99 %)
7 diff
(99.1 %id)
TI_149301003   .a 491 to 1232 791 to 58   AAA   734/937
(78 %)
16 diff
(98.3 %id)
CA312085 Human Lung Epithelial cells, lung .a 494 to 1232 759 to 19   AAA   741/741
(100 %)
4 diff
(99.5 %id)
BG180596 adenocarcinoma, cell line, Prostate .a 502 to 1106 1 to 593       593/637
(93 %)
15 diff
(97.7 %id)
BG181125 adenocarcinoma, cell line, Prostate .a 503 to 1226 1 to 721       721/773
(93 %)
12 diff
(98.5 %id)
BM976972 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 525 to 1232 721 to 19   AAA   703/711
(98 %)
9 diff
(98.8 %id)
BQ448302 Knee, Osteoarthritic Cartilage .a 557 to 1232 694 to 19   AAA   676/676
(100 %)
5 diff
(99.3 %id)
BQ448708 Knee, Osteoarthritic Cartilage .a 583 to 1235 673 to 19   AAA   655/655
(100 %)
4 diff
(99.4 %id)
AA557270 breast .a 589 to 1233 645 to 5       641/649
(98 %)
19 diff
(97.1 %id)
AI597824 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 592 to 1232 639 to 1       639/721
(88 %)
11 diff
(98.5 %id)
AI741254 pooled .a 592 to 1002 411 to 1       411/418
(98 %)
21 diff
(95.0 %id)
AW083335 colon, moderately differentiated adenocarcinoma .a 592 to 1232 660 to 19   AAA   642/827
(77 %)
31 diff
(96.3 %id)
BU539084 adenocarcinoma, cell line, breast .a 592 to 1219 78 to 711       634/1278
(49 %)
25 diff
(98.1 %id)
TI_149299395   .a 592 to 1232 736 to 97   AAA   640/799
(80 %)
20 diff
(97.5 %id)
BU625315 cell lines, Enchondroma .a 594 to 1232 658 to 19   AAA   640/640
(100 %)
2 diff
(99.7 %id)
AV692162 hepatocellular carcinoma .a 602 to 1011 1 to 400       405/401
(100 %)
6 diff
(98.6 %id)
AI912301 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 609 to 1232 629 to 11   AAA   619/619
(100 %)
16 diff
(97.5 %id)
BE223088 brain, oligodendroglioma .a 612 to 1232 621 to 1       621/621
(100 %)
12 diff
(98.1 %id)
AW026462 brain, glioblastoma (pooled) .a 616 to 1232 617 to 1       617/622
(99 %)
20 diff
(96.8 %id)
BU626799 Alveolar Macrophage, lung .a 629 to 1232 623 to 19   AAA   605/605
(100 %)
12 diff
(98.1 %id)
BM694278 eye, RPE and Choroid .a 658 to 1078 1 to 421       421/421
(100 %)
1 diff
(99.8 %id)
BF350684 head_neck .a 665 to 1041 9 to 385       377/385
(97 %)
9 diff
(97.7 %id)
AI422371 brain, glioblastoma (pooled) .a 675 to 1232 557 to 1       557/557
(100 %)
9 diff
(98.4 %id)
AW383556 head_neck .a 676 to 1196 9 to 526       518/534
(97 %)
11 diff
(98.0 %id)
W19096 lung .a 681 to 1009 1 to 326   fully sequenced,   326/326
(100 %)
3 diff
(99.1 %id)
BU628909 cell lines, Chondrosarcoma .a 688 to 1232 563 to 19   AAA   545/545
(100 %)
4 diff
(99.3 %id)
T62775 lung .a 701 to 915 1 to 215   fully sequenced,   215/215
(100 %)
5 diff
(97.7 %id)
BU627353 Bone, Enchondroma cell line .a 702 to 1232 549 to 19   AAA   531/531
(100 %)
3 diff
(99.5 %id)
R48437 breast .a 716 to 862 1 to 147   tiling clone,   147/148
(99 %)
1 diff
(99.4 %id)
AA025690 heart .a 737 to 1233 502 to 1       500/502
(99 %)
7 diff
(98.7 %id)
BU732151 eye, RPE and Choroid .a 738 to 1232 513 to 19   fully sequenced, AAA   495/495
(100 %)
2 diff
(99.6 %id)
AA115662 colon, tumor .a 776 to 1232 464 to 1       464/469
(98 %)
11 diff
(97.7 %id)
T62923 lung .a 854 to 1193 341 to 1   fully sequenced,   341/341
(100 %)
11 diff
(96.8 %id)
AA195653 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 864 to 1232 369 to 1       369/375
(98 %)
2 diff
(99.5 %id)
AA532945 normal prostatic epithelial cells, Prostate .a 881 to 1232 47 to 396   AAA   350/396
(88 %)
6 diff
(98.5 %id)
AW304898 brain, three pooled meningiomas .a 882 to 1232 351 to 1       351/351
(100 %)
16 diff
(95.5 %id)
AI611771 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 883 to 1232 348 to 1       348/412
(84 %)
12 diff
(97.1 %id)
AI686486 Prostate .a 885 to 1232 367 to 21   AAA   347/347
(100 %)
4 diff
(98.9 %id)
BM991726 Bone, Subchondral Bone .a 885 to 1229 364 to 22       343/364
(94 %)
0 diff
(100 %id)
AA827287 Kidney, kidney tumor .a 898 to 1235 350 to 13   AAA   338/338
(100 %)
1 diff
(99.8 %id)
AA910661 pooled germ cell tumors .a 900 to 1232 363 to 31   AAA   333/333
(100 %)
3 diff
(99.1 %id)
AA088879 colon, tumor .a 903 to 1233 333 to 1       333/333
(100 %)
5 diff
(98.5 %id)
AA563655 colon .a 933 to 1002 70 to 1       70/70
(100 %)
2 diff
(97.2 %id)
AW135289   .a 940 to 1232 310 to 18   AAA   293/303
(96 %)
0 diff
(100 %id)
AA864863 Kidney .a 974 to 1232 258 to 1       258/258
(100 %)
1 diff
(99.7 %id)
N79618 lung .a 979 to 1235 259 to 1   fully sequenced,   259/259
(100 %)
5 diff
(98.1 %id)
AI970961 Prostate .a 984 to 1232 267 to 18   AAA   250/252
(99 %)
9 diff
(96.5 %id)
AA026789 heart .a 997 to 1232 263 to 27   AAA   237/237
(100 %)
1 diff
(99.6 %id)
AI934953 2 pooled tumors (clear cell type), Kidney .a 1026 to 1233 210 to 3       208/210
(99 %)
0 diff
(100 %id)
BU733169 eye, RPE and Choroid .a 1068 to 1232 183 to 19   AAA   165/165
(100 %)
3 diff
(98.2 %id)
BQ020479 Fibrosarcoma .a 1075 to 1232 176 to 19   AAA   158/158
(100 %)
0 diff
(100 %id)
BQ773535 Chondrosarcoma Cell line .a 1085 to 1232 166 to 19   AAA   148/148
(100 %)
1 diff
(99.4 %id)
AW118002 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1090 to 1231 142 to 1       142/142
(100 %)
0 diff
(100 %id)
BU629908 cell lines, Chondrosarcoma .a 1090 to 1232 161 to 19   AAA   143/143
(100 %)
0 diff
(100 %id)
CA748732 Alveolar Macrophage, lung .a 1090 to 1232 161 to 19   AAA   143/143
(100 %)
0 diff
(100 %id)
AW973310   .a 1092 to 1231 140 to 1     Submitted on the opposite strand 140/196
(71 %)
0 diff
(100 %id)
BM996594 lung, Metastatic Chondrosarcoma .a 1099 to 1232 152 to 19   AAA   134/134
(100 %)
0 diff
(100 %id)
AW082544 esophagus, squamous cell carcinoma .a 1120 to 1233 114 to 1       114/114
(100 %)
0 diff
(100 %id)
BU571030 brain, glioblastoma .b 1 to 789 1 to 797   tiling clone,   797/821
(97 %)
22 diff
(97.4 %id)
BG031208 breast, mammary adenocarcinoma, cell line .b 14 to 786 29 to 806       778/1083
(71 %)
34 diff
(96.9 %id)
BM794608 stomach .b 31 to 650 1 to 622       622/622
(100 %)
3 diff
(99.6 %id)
BG620481 placenta .b 36 to 727 1 to 692       692/692
(100 %)
5 diff
(99.3 %id)
CD386422 embryonic trophoblasts, made from WA01 stemcells .b 38 to 894 23 to 885       863/897
(96 %)
21 diff
(97.7 %id)
BG749376 eye, normal pigmented retinal epithelium .b 44 to 632 1 to 589       589/591
(99 %)
2 diff
(99.7 %id)
BU509431 leiomyosarcoma, uterus .b 46 to 900 1 to 857       857/928
(92 %)
12 diff
(98.8 %id)
BU188808 melanotic melanoma, cell line, skin .b 47 to 894 1 to 853       853/931
(91 %)
24 diff
(97.5 %id)
BP252023 Kidney .b 50 to 633 1 to 584       584/584
(100 %)
6 diff
(99.0 %id)
BG768141 melanotic melanoma, high MDR (cell line), skin .b 57 to 724 1 to 668       668/668
(100 %)
2 diff
(99.8 %id)
BP347827 brain .b 57 to 638 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
CB152434 cervix, Uterine .b 58 to 650 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
BP336006 coronary artery .b 61 to 652 1 to 594       594/594
(100 %)
4 diff
(99.4 %id)
BU188405 melanotic melanoma, skin .b 62 to 634 11 to 591       581/1019
(57 %)
21 diff
(98.0 %id)
BG430903 Kidney .b 63 to 782 1 to 720       720/809
(88 %)
27 diff
(96.7 %id)
BM690431 eye, RPE and Choroid .b 63 to 598 1 to 534       534/534
(100 %)
6 diff
(98.9 %id)
BM806352 melanotic melanoma, skin .b 64 to 971 1 to 906       911/1008
(90 %)
12 diff
(98.9 %id)
BG420906 Kidney, renal cell adenocarcinoma .b 75 to 753 1 to 684       684/963
(71 %)
27 diff
(97.2 %id)
BG479076 choriocarcinoma, placenta .b 76 to 788 1 to 712       712/729
(97 %)
5 diff
(99.4 %id)
CD705583 normal nasopharynx .b 77 to 630 16 to 569       554/569
(97 %)
8 diff
(98.6 %id)
BG677454 skin, squamous cell carcinoma .b 83 to 835 1 to 757       757/757
(100 %)
12 diff
(98.5 %id)
BE735600 adenocarcinoma, Pancreas .b 94 to 895 1 to 795       795/905
(87 %)
22 diff
(97.6 %id)
BE735639 adenocarcinoma, Pancreas .b 95 to 893 1 to 802       802/862
(93 %)
27 diff
(96.9 %id)
BM717524 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 135 to 586 1 to 452   fully sequenced,   452/452
(100 %)
0 diff
(100 %id)
CN255349 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 147 to 724 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
AJ714319 bone marrow .b 149 to 646 13 to 510       498/510
(97 %)
7 diff
(98.7 %id)
BM795339 Ascites, stomach .b 215 to 651 1 to 438       438/438
(100 %)
2 diff
(99.6 %id)
BU154519 melanotic melanoma, skin .b 237 to 1016 1 to 784       784/927
(84 %)
11 diff
(98.9 %id)
AA535662 invasive prostate tumor, Prostate .b 279 to 750 1 to 470       470/470
(100 %)
8 diff
(98.3 %id)
BG337860 leiomyosarcoma cell line, uterus .b 350 to 1110 1 to 752       750/1113
(67 %)
22 diff
(98.1 %id)
BQ671285 epidermoid carcinoma, cell line, salivary gland .b 416 to 1025 1 to 610       610/934
(65 %)
7 diff
(99.3 %id)
BQ674035 epidermoid carcinoma, cell line, salivary gland .b 416 to 1019 1 to 604       604/610
(99 %)
17 diff
(97.3 %id)
BQ672501 epidermoid carcinoma, cell line, salivary gland .b 416 to 1026 1 to 611       611/615
(99 %)
8 diff
(98.7 %id)
AA740882 germinal center B cell .b 487 to 1187 699 to 1   tiling clone,   699/837
(83 %)
12 diff
(98.6 %id)
BG539757 lung .b 495 to 1242 1 to 746       746/765
(97 %)
15 diff
(98.1 %id)
BQ015314 Chondrosarcoma, Left Pubic Bone .b 512 to 1225 732 to 19   AAA   714/714
(100 %)
2 diff
(99.8 %id)
AI042018 parathyroid gland, parathyroid tumor .b 515 to 1247 742 to 9   tiling clone,   734/742
(98 %)
9 diff
(98.8 %id)
CA308499 Alveolar Macrophage, lung .b 524 to 1243 737 to 19   AAA   719/723
(99 %)
2 diff
(99.8 %id)
BE906684 epithelioid carcinoma, Pancreas .b 529 to 1244 1 to 712   tiling clone,   712/805
(88 %)
20 diff
(97.6 %id)
BM674806 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 556 to 1243 706 to 19   fully sequenced, AAA   688/688
(100 %)
2 diff
(99.8 %id)
AA536149 colon .b 695 to 1244 551 to 6       546/553
(98 %)
28 diff
(95.0 %id)
AI472029 pooled .b 698 to 1243 561 to 17   AAA   545/545
(100 %)
23 diff
(95.8 %id)
BM725450 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 726 to 1243 1 to 518   fully sequenced, AAA   518/518
(100 %)
1 diff
(99.9 %id)
BU538017 adenocarcinoma, cell line, breast .b 733 to 1246 8 to 521   AAA   514/521
(98 %)
7 diff
(98.7 %id)
AA599923 bone marrow stroma .b 734 to 1210 474 to 1       474/474
(100 %)
9 diff
(98.2 %id)
AI862993 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 736 to 1055 319 to 1       319/322
(99 %)
27 diff
(91.7 %id)
CD368140 Alveolar Macrophage, lung .b 742 to 1243 520 to 19   AAA   502/502
(100 %)
10 diff
(98.1 %id)
AA435595   .b 743 to 1244 504 to 3       502/504
(99 %)
8 diff
(98.5 %id)
AI185742 lung .b 746 to 1243 509 to 11   AAA   499/499
(100 %)
8 diff
(98.4 %id)
AA768823 germinal center B cell .b 752 to 1244 500 to 9       492/500
(98 %)
2 diff
(99.6 %id)
AI269243 Kidney .b 752 to 1243 490 to 1       490/490
(100 %)
14 diff
(97.2 %id)
AA832092 germinal center B cell .b 755 to 1244 497 to 9       489/497
(98 %)
5 diff
(99.0 %id)
AI142433 uterus .b 755 to 1243 489 to 1       489/489
(100 %)
4 diff
(99.2 %id)
AI809169 B-cell, chronic lymphotic leukemia .b 764 to 1246 512 to 30   AAA   483/483
(100 %)
36 diff
(92.6 %id)
BM975734 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 768 to 1243 494 to 19   AAA   476/476
(100 %)
1 diff
(99.8 %id)
AA643731 colon, colon tumor RER+ .b 770 to 1242 473 to 1       473/473
(100 %)
3 diff
(99.4 %id)
AA552384 colon, tumor .b 772 to 1243 472 to 1       472/474
(99 %)
4 diff
(99.2 %id)
AI074278 colon, colon tumor .b 787 to 1243 457 to 1       457/477
(95 %)
11 diff
(97.7 %id)
AA995264 2 pooled tumors (clear cell type), Kidney .b 787 to 1244 462 to 5       458/479
(95 %)
9 diff
(98.2 %id)
AI095837 uterus .b 787 to 1244 466 to 9       458/480
(95 %)
2 diff
(99.6 %id)
AI687921 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 787 to 1244 460 to 3       458/492
(93 %)
18 diff
(96.4 %id)
AI300521 2 pooled tumors (clear cell type), Kidney .b 797 to 1244 455 to 8       448/455
(98 %)
1 diff
(99.8 %id)
BG168316 hypernephroma, cell line, Kidney .b 804 to 1243 1 to 440   AAA   440/440
(100 %)
1 diff
(99.8 %id)
AI085929 senescent fibroblast .b 812 to 1244 437 to 5       433/437
(99 %)
7 diff
(98.4 %id)
BF360012 marrow .b 845 to 1097 253 to 2       252/266
(94 %)
3 diff
(98.9 %id)
AI041689 parathyroid gland, parathyroid tumor .b 848 to 1247 408 to 9       400/408
(98 %)
1 diff
(99.8 %id)
BM677873 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 865 to 1243 397 to 19   fully sequenced, AAA   379/379
(100 %)
1 diff
(99.8 %id)
BG476389 melanotic melanoma, skin .b 872 to 1243 1 to 372   AAA   372/372
(100 %)
1 diff
(99.8 %id)
AA766759 germinal center B cell .b 878 to 1243 407 to 46   AAA   362/362
(100 %)
17 diff
(95.4 %id)
BM663261 eye, RPE and Choroid .b 1103 to 1243 158 to 18   AAA   141/143
(98 %)
3 diff
(98.0 %id)
AA394026   .c 1 to 463 1 to 463   tiling clone,   463/463
(100 %)
1 diff
(99.8 %id)
CD368051 Alveolar Macrophage, lung .c 332 to 1054 738 to 19   tiling clone, AAA   720/720
(100 %)
5 diff
(99.4 %id)
CD366111 Alveolar Macrophage, lung .d 1 to 705 728 to 14 V4G L5C Q6N Q7K K8R ... tiling clone, AAA   710/715
(99 %)
8 diff
(98.9 %id)
CB108985 Liver .e 1 to 641 1 to 641 exact tiling clone,   641/641
(100 %)
2 diff
(99.7 %id)
CR994375 T-Lymphocytes .e 57 to 750 1 to 694 exact tiling clone,   694/695
(99 %)
2 diff
(99.8 %id)
CB130670 cervix, Uterine .f 1 to 383 1 to 383   tiling clone,   383/383
(100 %)
0 diff
(100 %id)
BE063284 breast .f 333 to 813 490 to 11   tiling clone, Submitted on the opposite strand 480/490
(97 %)
0 diff
(100 %id)
DN998366 bone marrow .g 1 to 598 1 to 597 exact tiling clone,   597/597
(100 %)
5 diff
(99.2 %id)
BX954767   .g 462 to 1161 1 to 700   tiling clone,   700/700
(100 %)
0 diff
(100 %id)
CV379389 bladder_tumor .g 781 to 1069 1 to 286       286/286
(100 %)
8 diff
(97.3 %id)
BQ219324 brain .g 1007 to 1724 16 to 748   tiling clone,   733/975
(75 %)
26 diff
(97.4 %id)
CA308785 Alveolar Macrophage, lung Gene IFI35, variant not shown       AAA Suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored    
AJ706233 bone marrow Gene IFI35, variant not shown         This clone was ignored    
FN049749 breast carcinoma Gene IFI35, variant not shown         This clone was ignored    
AA132931 colon, tumor Gene IFI35, variant not shown       AAA This clone was ignored    
AA133076 colon, tumor Gene IFI35, variant not shown         This clone was ignored    
AI285287 adenocarcinoma, colon Gene IFI35, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI