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Gene ICT1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
141 supporting clones for gene ICT1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BU161221 melanotic melanoma, skin .a 1 to 825 1 to 831   tiling clone,   831/881
(94 %)
11 diff
(98.8 %id)
CD683824 normal nasopharynx .a 610 to 974 40 to 404       365/404
(90 %)
6 diff
(98.6 %id)
DW451185 Liver .a 610 to 789 15 to 194       180/194
(92 %)
6 diff
(97.0 %id)
DB456649 testis .a 610 to 1105 1 to 496       496/496
(100 %)
2 diff
(99.6 %id)
CK002145 brain/CNS, Bulk tissue from Human Spinal cord .a 613 to 1286 1 to 673       673/676
(99 %)
9 diff
(98.7 %id)
BM790637 stomach .a 613 to 1273 1 to 661       661/661
(100 %)
0 diff
(100 %id)
DB483707 hippocampus .a 616 to 1072 1 to 457       457/457
(100 %)
5 diff
(99.0 %id)
BM832348 stomach .a 616 to 937 1 to 322       322/322
(100 %)
1 diff
(99.7 %id)
BM832377 stomach .a 616 to 900 1 to 285       285/285
(100 %)
1 diff
(99.7 %id)
AU077346   .a 616 to 682 1 to 67       67/67
(100 %)
1 diff
(98.6 %id)
AU100314   .a 616 to 915 1 to 300       300/300
(100 %)
4 diff
(98.7 %id)
BG707350 brain, hypothalamus .a 617 to 1438 1 to 825       825/938
(87 %)
49 diff
(94.8 %id)
BP381131   .a 617 to 1222 1 to 603       603/706
(85 %)
12 diff
(98.4 %id)
BP265019 muscle .a 619 to 1317 1 to 701       701/703
(99 %)
22 diff
(96.9 %id)
BG830270 epithelioid carcinoma cell line, Pancreas .a 619 to 1143 1 to 525       525/527
(99 %)
2 diff
(99.7 %id)
AK222553 adipose tissue .a 620 to 1508 1 to 889   AAA   889/889
(100 %)
1 diff
(99.9 %id)
BU506622 mixed (pool of 40 RNAs) .a 620 to 1166 1 to 553       553/852
(64 %)
14 diff
(98.4 %id)
BM785123 Ascites, stomach .a 620 to 1019 1 to 400       400/400
(100 %)
0 diff
(100 %id)
BM744821 Ascites, stomach .a 620 to 1157 1 to 538       538/538
(100 %)
0 diff
(100 %id)
BM764915 Ascites, stomach .a 620 to 1289 1 to 670       670/670
(100 %)
0 diff
(100 %id)
BM773354 Ascites, stomach .a 620 to 1160 1 to 541       541/541
(100 %)
0 diff
(100 %id)
BM781675 Ascites, stomach .a 620 to 1271 1 to 652       652/652
(100 %)
0 diff
(100 %id)
BP382774 adipose tissue .a 621 to 1224 1 to 604       604/608
(99 %)
16 diff
(97.4 %id)
BP217214 corpus callosum .a 621 to 1202 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP870592 embryonal kidney .a 622 to 951 1 to 330       330/330
(100 %)
1 diff
(99.7 %id)
AK314138 tongue, tumor tissue .a 622 to 1253 1 to 632       632/632
(100 %)
0 diff
(100 %id)
BP200552 amygdala .a 622 to 1136 1 to 515       515/523
(98 %)
1 diff
(99.9 %id)
DB489162 hypothalamus .a 622 to 1065 1 to 442       442/442
(100 %)
8 diff
(98.2 %id)
BP259376 heart .a 622 to 1167 1 to 546       546/581
(93 %)
18 diff
(97.0 %id)
CB996999 placenta, pre-eclamptic placenta .a 622 to 1375 28 to 790       763/832
(91 %)
28 diff
(96.7 %id)
CB995545 placenta, pre-eclamptic placenta .a 622 to 1296 28 to 710       683/842
(81 %)
31 diff
(96.4 %id)
CB116314 Liver .a 622 to 804 1 to 183       183/183
(100 %)
1 diff
(99.5 %id)
CB142973 Liver .a 622 to 1166 1 to 545       545/545
(100 %)
0 diff
(100 %id)
TI_1948099878   .a 622 to 886 116 to 380   fully sequenced,   265/281
(94 %)
5 diff
(98.3 %id)
TI_1948100227   .a 622 to 886 118 to 382   fully sequenced,   265/282
(93 %)
5 diff
(98.3 %id)
BF154589 breast_normal .a 623 to 1026 410 to 5       406/414
(98 %)
6 diff
(98.6 %id)
BF751544 breast_normal .a 623 to 1051 428 to 1     Submitted on the opposite strand 428/432
(99 %)
5 diff
(98.9 %id)
DA460170 tongue, tumor tissue .a 623 to 1188 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BG177089 lymph, lymphoma, cell line .a 626 to 1330 1 to 703       703/965
(72 %)
7 diff
(99.3 %id)
BC015335 Lymph, lymphoma .a 627 to 1508 1 to 882   tiling clone, available from MGC, AAA   882/882
(100 %)
0 diff
(100 %id)
BQ226316 large cell carcinoma, lung .a 627 to 1277 1 to 658       658/940
(70 %)
21 diff
(97.8 %id)
BM714830 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 627 to 1135 1 to 509       509/509
(100 %)
2 diff
(99.7 %id)
DB483752 hippocampus .a 628 to 1081 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
AA488539   .a 629 to 1013 1 to 384       384/384
(100 %)
2 diff
(99.5 %id)
NM_001545.1   .a 631 to 1508 1 to 878   RefSeq, AAA   878/878
(100 %)
1 diff
(99.9 %id)
BM832200 stomach .a 631 to 922 1 to 291       291/291
(100 %)
3 diff
(99.0 %id)
X81788   .a 631 to 1508 1 to 878   AAA   878/878
(100 %)
1 diff
(99.9 %id)
BT007111   .a 633 to 1251 1 to 619       619/621
(99 %)
1 diff
(99.9 %id)
CV023954 mixed .a 633 to 1252 1 to 620       620/635
(97 %)
1 diff
(99.9 %id)
CR993665 T-Lymphocytes .a 635 to 1460 1 to 829       829/829
(100 %)
5 diff
(99.4 %id)
BI194041 epithelioid carcinoma cell line, Pancreas .a 636 to 1508 1 to 876       876/884
(99 %)
32 diff
(96.4 %id)
BI257735 cervical carcinoma cell line, cervix .a 636 to 1512 1 to 882       882/898
(98 %)
16 diff
(98.3 %id)
ES312137 frontal balding hair, skin .a 640 to 818 1 to 179       179/189
(94 %)
3 diff
(98.5 %id)
AA307839 colon .a 641 to 1091 1 to 449       449/449
(100 %)
2 diff
(99.6 %id)
CD611961   .a 642 to 807 1 to 168       168/176
(95 %)
6 diff
(96.6 %id)
BF976748 B-cells, primary B-cells from tonsils (cell line) .a 643 to 1399 1 to 752   AAA   752/940
(80 %)
12 diff
(98.8 %id)
AV707327 adrenal gland .a 644 to 1343 1 to 651       626/651
(96 %)
31 diff
(95.3 %id)
BE906404 epithelioid carcinoma, Pancreas .a 644 to 1160 1 to 518       518/520
(99 %)
2 diff
(99.7 %id)
CD611956   .a 645 to 807 1 to 164       164/172
(95 %)
5 diff
(97.1 %id)
CD611957   .a 645 to 807 171 to 8       164/171
(95 %)
0 diff
(100 %id)
CD611958   .a 645 to 807 1 to 164       164/172
(95 %)
5 diff
(97.1 %id)
CD611959   .a 645 to 807 167 to 5       163/167
(97 %)
0 diff
(100 %id)
CD611960   .a 645 to 807 171 to 8       164/171
(95 %)
0 diff
(100 %id)
AA210934   .a 645 to 1069 1 to 428   fully sequenced,   428/428
(100 %)
8 diff
(98.2 %id)
DN997184 breast cancer, Mammary gland (cancer tissue) .a 646 to 852 9 to 215       207/215
(96 %)
6 diff
(97.3 %id)
BM822000 stomach .a 647 to 993 1 to 347       347/347
(100 %)
3 diff
(99.2 %id)
BG756832 B-cells, primary B-cells from tonsils (cell line) .a 650 to 1313 1 to 665       665/665
(100 %)
3 diff
(99.6 %id)
DB486457 hypothalamus .a 655 to 1076 1 to 422       422/422
(100 %)
7 diff
(98.4 %id)
BG341725 B-cells, primary B-cells from tonsils (cell line) .a 655 to 1339 1 to 699       695/701
(99 %)
24 diff
(96.6 %id)
BE620945 epithelioid carcinoma, Pancreas .a 657 to 1338 1 to 700       700/746
(93 %)
35 diff
(95.4 %id)
BE736039 adenocarcinoma, Pancreas .a 659 to 1414 1 to 764       764/774
(98 %)
24 diff
(96.9 %id)
CN414608 embryonic stem cells, DMSO-treated H9 cellline .a 667 to 1377 5 to 715       711/718
(99 %)
7 diff
(99.1 %id)
BE744797 adenocarcinoma cell line, ovary .a 667 to 1485 1 to 815       815/861
(94 %)
21 diff
(97.6 %id)
BG438291 large cell carcinoma, lung .a 692 to 1251 41 to 604       564/604
(93 %)
10 diff
(98.4 %id)
TI_1948100057   .a 714 to 1252 668 to 130       539/566
(95 %)
0 diff
(100 %id)
TI_1948099708   .a 727 to 1252 655 to 130       526/553
(95 %)
0 diff
(100 %id)
BE621766 epithelioid carcinoma, Pancreas .a 731 to 1496 799 to 23       773/933
(82 %)
24 diff
(97.5 %id)
BE181028 head_neck .a 733 to 1053 343 to 11     Submitted on the opposite strand 330/387
(85 %)
19 diff
(95.1 %id)
TI_57230144   .a 752 to 1483 89 to 820       737/733
(100 %)
12 diff
(98.4 %id)
BI870683 adenocarcinoma, cell line, Liver .a 753 to 1483 1 to 731       736/732
(100 %)
12 diff
(98.4 %id)
BE791064 lung, small cell carcinoma .a 790 to 1509 34 to 752       719/757
(94 %)
16 diff
(97.9 %id)
TI_1948099879   .a 825 to 1252 559 to 132   fully sequenced,   428/559
(76 %)
0 diff
(100 %id)
TI_1948100228   .a 825 to 1252 554 to 127   fully sequenced,   428/554
(77 %)
1 diff
(99.9 %id)
CD517995 White Matter .a 866 to 1508 35 to 678   AAA   642/678
(94 %)
10 diff
(98.6 %id)
AW102838 ovary, tumor, 5 pooled (see description) .a 914 to 1508 593 to 1       593/609
(97 %)
18 diff
(97.1 %id)
BE965400 epithelioid carcinoma, Pancreas .a 914 to 1508 617 to 16   AAA   602/787
(76 %)
31 diff
(96.1 %id)
AI768615 Kidney .a 921 to 1502 598 to 18   AAA   581/581
(100 %)
19 diff
(96.8 %id)
BG026487 Bone, osteosarcoma, cell line .a 932 to 1508 1 to 577   AAA   577/577
(100 %)
2 diff
(99.7 %id)
BE550387 pooled germ cell tumors .a 942 to 1248 307 to 1       307/307
(100 %)
12 diff
(96.1 %id)
BU532154 mixed (pool of 40 RNAs) .a 985 to 1507 1 to 523       523/566
(92 %)
4 diff
(99.3 %id)
DB552709 hippocampus .a 1026 to 1508 1 to 483     Submitted on the opposite strand 483/483
(100 %)
3 diff
(99.4 %id)
AI014780   .a 1032 to 1509 481 to 4   tiling clone,   478/484
(98 %)
1 diff
(99.8 %id)
DB522070 testis .a 1035 to 1508 1 to 474     Submitted on the opposite strand 474/474
(100 %)
1 diff
(99.8 %id)
AA207203   .a 1039 to 1509 466 to 1   fully sequenced,   466/466
(100 %)
2 diff
(99.6 %id)
DB555451 hypothalamus .a 1049 to 1506 1 to 459     Submitted on the opposite strand 459/461
(99 %)
3 diff
(99.4 %id)
AA169383   .a 1058 to 1484 434 to 1       434/437
(99 %)
7 diff
(98.4 %id)
AI494072 Kidney .a 1062 to 1508 475 to 29   AAA   447/447
(100 %)
6 diff
(98.7 %id)
DB555653 hypothalamus .a 1064 to 1506 1 to 446     Submitted on the opposite strand 446/448
(99 %)
13 diff
(97.1 %id)
BU858752 mixed (pool of 40 RNAs) .a 1065 to 1509 1 to 445       445/479
(92 %)
2 diff
(99.6 %id)
BF125465 melanotic melanoma, skin .a 1095 to 1508 1 to 414   AAA   414/414
(100 %)
0 diff
(100 %id)
FN131902 breast carcinoma .a 1103 to 1207 1 to 109       109/109
(100 %)
6 diff
(94.5 %id)
AA575831 breast, breast tumor .a 1110 to 1484 374 to 1       374/377
(99 %)
1 diff
(99.8 %id)
BU739411 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1114 to 1508 413 to 19   AAA   395/395
(100 %)
3 diff
(99.3 %id)
BU739721 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1114 to 1508 413 to 19   AAA   395/395
(100 %)
13 diff
(96.8 %id)
CA337908 1st pharyngeal arch (pooled) .a 1166 to 1508 1 to 343       343/343
(100 %)
0 diff
(100 %id)
BF969484 adrenal cortex carcinoma, cell line, adrenal gland .a 1192 to 1508 1 to 317   AAA   317/317
(100 %)
0 diff
(100 %id)
BG178129 adenocarcinoma, cell line, Prostate .a 1202 to 1508 1 to 307   AAA   307/307
(100 %)
0 diff
(100 %id)
AA642525 normal prostate, Prostate .a 1207 to 1509 306 to 4       303/306
(99 %)
0 diff
(100 %id)
AA665379 metastatic prostate bone lesion .a 1210 to 1509 309 to 10       300/309
(97 %)
0 diff
(100 %id)
BM850252 stomach .a 1215 to 1406 1 to 192       192/192
(100 %)
0 diff
(100 %id)
AI349224 bone marrow, stem cell 34+/38+ .a 1221 to 1508 1 to 287   AAA Submitted on the opposite strand 287/287
(100 %)
6 diff
(98.0 %id)
T49952 placenta .a 1276 to 1509 1 to 235   fully sequenced,   235/235
(100 %)
1 diff
(99.6 %id)
F26590 pectoral muscle (after mastectomy) .a 1285 to 1497 1 to 212       212/212
(100 %)
2 diff
(99.1 %id)
BQ305020 breast .a 1291 to 1510 1 to 219   AAA   219/219
(100 %)
5 diff
(97.8 %id)
BM422382 testis .a 1301 to 1508 236 to 29   AAA Submitted on the opposite strand 208/208
(100 %)
8 diff
(96.2 %id)
BM422386 testis .a 1301 to 1509 1 to 209       209/238
(87 %)
2 diff
(99.2 %id)
T49953 placenta .a 1312 to 1508 197 to 1   fully sequenced,   197/197
(100 %)
0 diff
(100 %id)
DB552659 hippocampus .a 1314 to 1506 1 to 193     Submitted on the opposite strand 193/195
(98 %)
1 diff
(99.5 %id)
BM668745 eye, Retina Foveal and Macular .a 1333 to 1508 1 to 177   AAA Submitted on the opposite strand 177/177
(100 %)
4 diff
(97.8 %id)
BM693467 eye, Retina Foveal and Macular .a 1333 to 1508 210 to 35   AAA Submitted on the opposite strand 176/180
(97 %)
3 diff
(98.4 %id)
AI692751 carcinoid, lung .a 1366 to 1507 142 to 1       142/142
(100 %)
0 diff
(100 %id)
FN120067 breast carcinoma .a 1445 to 1507 64 to 3     Submitted on the opposite strand 62/64
(96 %)
0 diff
(100 %id)
BM821741 stomach .b 1 to 547 1 to 547       547/547
(100 %)
0 diff
(100 %id)
BM831332 stomach .b 1 to 515 1 to 515       515/515
(100 %)
0 diff
(100 %id)
BM831439 stomach .b 1 to 593 1 to 593 exact tiling clone,   593/593
(100 %)
0 diff
(100 %id)
AW117940 esophagus, squamous cell carcinoma .c 1 to 660 660 to 1 T2L N21K A34P E37R E41K tiling clone,   660/699
(94 %)
9 diff
(98.8 %id)
BM726088 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d-u 1 to 613 1 to 613 W112X G114X tiling clone,   613/613
(100 %)
0 diff
(100 %id)
AI525489 Prostate .d-u 4 to 426 1 to 432 A3X P20X P21X P22T K34X ...     432/736
(58 %)
20 diff
(97.3 %id)
BM929930 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d-u 7 to 573 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
AW271544 Kidney .d-u 10 to 610 601 to 1       601/601
(100 %)
1 diff
(99.9 %id)
BE410194 choriocarcinoma, placenta .d-u 16 to 544 14 to 545   tiling clone, AAA   532/545
(97 %)
6 diff
(98.9 %id)
BF915174 uterus_tumor .d-u 239 to 369 131 to 1     Submitted on the opposite strand 131/131
(100 %)
0 diff
(100 %id)
TI_149307337   .e 1 to 789 891 to 103 exact tiling clone, AAA   789/948
(83 %)
5 diff
(99.5 %id)
BM979141 lung, Primary Lung Epithelial Cells .e 113 to 789 696 to 19 exact tiling clone, AAA   678/678
(100 %)
2 diff
(99.8 %id)
BF724521 eye, Iris .g 1 to 513 1 to 513 exact tiling clone,   513/513
(100 %)
0 diff
(100 %id)
AA524079 colon .h-u 1 to 449 449 to 1 exact tiling clone,   449/449
(100 %)
0 diff
(100 %id)
CV378414 prostate_tumor .i-u 1 to 420 1 to 420 Y2H F4R P6Q P7Q R8Y ... tiling clone,   420/430
(97 %)
11 diff
(97.5 %id)
BG979450 colon_normal .j-u -11 to 281 1 to 292 I4L V25G tiling clone,   292/292
(100 %)
6 diff
(98.0 %id)
DB319314 lung Gene ICT1, variant not shown         This clone was ignored    
DA583734 lung Gene ICT1, variant not shown       capped This clone was ignored    
AW390064 stomach Gene ICT1, variant not shown         Suspected internal deletion, this clone was ignored    
AA834627 ovary Gene ICT1, variant not shown         This clone was ignored    
AI688512 colon Gene ICT1, variant not shown         This clone was ignored    
BI544874 brain, hippocampus Gene ICT1, variant not shown         This clone was ignored    
TI_44000827   Gene ICT1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g, .h-u, .i-u, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC