cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AA311897 | .d | 58 to 320 | 1 to 262 | 262/262 (100 %) | 2 diff (99.3 %id) | ||||
AK293543 | cerebellum | .a | 1 to 1215 | 1 to 1215 | F203Y | tiling clone, | 1215/1215 (100 %) | 1 diff (100.0 %id) | |
AW968081 | .i | 1348 to 2009 | 1 to 663 | 663/663 (100 %) | 12 diff (98.2 %id) | ||||
AW968083 | .i | 1339 to 1738 | 24 to 425 | 402/425 (94 %) | 13 diff (97.0 %id) | ||||
AY359054 | .f | 23 to 1323 | 1 to 1301 | E164S F165S H167T H168T K169S ... | tiling clone, AAA | 1301/1301 (100 %) | 3 diff (99.8 %id) | ||
AU185046 | skin | .i | 1251 to 1823 | 576 to 3 | 574/578 (99 %) | 7 diff (98.8 %id) | |||
BC007277 | Eye, retinoblastoma | .i | 2 to 2086 | 1 to 2085 | exact | tiling clone, available from MGC, AAA | 2085/2085 (100 %) | 0 diff (100 %id) | |
BC009731 | Lung, large cell carcinoma | .c | 34 to 1617 | 1 to 1584 | exact | tiling clone, available from MGC, AAA | 1584/1584 (100 %) | 0 diff (100 %id) | |
BC032672 | Testis, embryonal carcinoma | .b | 550 to 2729 | 1 to 2181 | exact | tiling clone, available from MGC, AAA | 2181/2181 (100 %) | 1 diff (100.0 %id) | |
BE147329 | head_neck | .q | 1 to 269 | 57 to 325 | D2C L6R T7S N16D | tiling clone, | 269/331 (81 %) | 10 diff (97.0 %id) | |
BF840714 | head_neck | .i | 1292 to 1797 | 3 to 501 | 499/501 (99 %) | 15 diff (97.1 %id) | |||
BQ336205 | marrow | .i | 1282 to 1474 | 12 to 197 | 186/197 (94 %) | 8 diff (96.0 %id) | |||
DC303408 | cerebellum | .a | 1 to 577 | 1 to 577 | 577/577 (100 %) | 0 diff (100 %id) | |||
DC306019 | cerebellum | .c | 10 to 511 | 1 to 502 | 502/502 (100 %) | 2 diff (99.7 %id) | |||
DC338337 | subthalamic nucleus | .c | 27 to 590 | 1 to 565 | 565/565 (100 %) | 1 diff (99.9 %id) | |||
DC338915 | subthalamic nucleus | .c | 18 to 581 | 1 to 564 | 564/564 (100 %) | 0 diff (100 %id) | |||
BX103110 | liver and spleen | .i | 1358 to 1826 | 1 to 469 | AAA | 469/469 (100 %) | 0 diff (100 %id) | ||
BP208898 | cerebellum | .f | 31 to 611 | 1 to 580 | 580/582 (99 %) | 3 diff (99.5 %id) | |||
CN261576 | embryonic stem cells, DMSO-treated H9 cellline | .i | 1671 to 2069 | 1 to 399 | 399/401 (99 %) | 6 diff (98.6 %id) | |||
CN261577 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .d | 69 to 602 | 1 to 534 | 534/534 (100 %) | 0 diff (100 %id) | |||
CN261578 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .d | 63 to 748 | 10 to 695 | 686/695 (98 %) | 6 diff (99.2 %id) | |||
CN261579 | embryonic stem cells, cell lines H1, H7, andH9 | .c | 41 to 774 | 1 to 735 | 735/735 (100 %) | 3 diff (99.6 %id) | |||
CR596429 | Placenta Cot 25-normalized | .d | 66 to 1590 | 1 to 1525 | exact | tiling clone, | 1525/1525 (100 %) | 0 diff (100 %id) | |
AL545867 | placenta, Placenta Cot 25-normalized | .d | 66 to 888 | 1 to 822 | fully sequenced, | 822/822 (100 %) | 6 diff (99.3 %id) | ||
AL571425 | placenta, Placenta Cot 25-normalized | .d | 858 to 1568 | 732 to 21 | fully sequenced, | 712/732 (97 %) | 4 diff (99.5 %id) | ||
BX391867 | .f | 251 to 875 | 623 to 1 | 623/623 (100 %) | 4 diff (99.4 %id) | ||||
BX400008 | .i | 1065 to 2055 | 987 to 1 | 987/987 (100 %) | 8 diff (99.2 %id) | ||||
CV025403 | mixed | .f | 232 to 874 | 1 to 643 | 643/650 (98 %) | 2 diff (99.7 %id) | |||
BX489033 | .c | 26 to 617 | 1 to 592 | 592/592 (100 %) | 5 diff (99.2 %id) | ||||
BX644696 | .o | 1 to 789 | 1 to 788 | exact | tiling clone, | 788/788 (100 %) | 8 diff (99.0 %id) | ||
DT218289 | brain | .c | 27 to 735 | 1 to 709 | 709/709 (100 %) | 0 diff (100 %id) | |||
EL733329 | mixed | .i | 746 to 1362 | 1 to 613 | 613/620 (98 %) | 6 diff (99.1 %id) | |||
DC354564 | Kidney | .f | 1 to 572 | 1 to 572 | tiling clone, | 572/572 (100 %) | 2 diff (99.7 %id) | ||
DC354717 | lung | .d | 4 to 585 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
CD672803 | eye, Iris | .i | 1682 to 2061 | 1 to 380 | AAA | 380/380 (100 %) | 0 diff (100 %id) | ||
FN055064 | breast carcinoma | .b | 2168 to 2266 | 1 to 99 | 99/103 (96 %) | 2 diff (98.1 %id) | |||
FN171829 | breast carcinoma | .f | 747 to 840 | 94 to 1 | Submitted on the opposite strand | 94/94 (100 %) | 0 diff (100 %id) | ||
GU211002 | .d | 191 to 1012 | 1 to 822 | M91T | 822/822 (100 %) | 3 diff (99.7 %id) | |||
DB451519. matches multiple genes | testis | .c | 1 to 499 | 1 to 499 | tiling clone, | also hits gene TCTN1 | 499/499 (100 %) | 2 diff (99.6 %id) | |
DB461860. matches multiple genes | testis | .c | 1 to 354 | 1 to 355 | also hits gene TCTN1 | 355/355 (100 %) | 4 diff (98.9 %id) | ||
W93376 | liver and spleen | .i | 1505 to 1857 | 355 to 1 | fully sequenced, | 355/355 (100 %) | 4 diff (98.9 %id) | ||
W94991 | liver and spleen | .i | 1310 to 1854 | 1 to 546 | fully sequenced, | 546/546 (100 %) | 7 diff (98.8 %id) | ||
AA251601 | germinal center B cell | .b | 2114 to 2292 | 1 to 179 | 179/179 (100 %) | 0 diff (100 %id) | |||
AA255934 | germinal center B cell | .d | 1236 to 1642 | 407 to 1 | 407/407 (100 %) | 5 diff (98.8 %id) | |||
AA258869 | germinal center B cell | .d | 1349 to 1642 | 315 to 22 | AAA | 294/294 (100 %) | 1 diff (99.7 %id) | ||
AA620934 | .d | 1224 to 1642 | 419 to 1 | 419/419 (100 %) | 4 diff (99.1 %id) | ||||
AA811096 | germinal center B cell | .d | 1197 to 1642 | 456 to 11 | AAA | 446/446 (100 %) | 1 diff (99.8 %id) | ||
AA807519 | germinal center B cell | .d | 1182 to 1642 | 482 to 22 | AAA | 461/461 (100 %) | 0 diff (100 %id) | ||
AA831648 | germinal center B cell | .d | 1192 to 1642 | 469 to 19 | AAA | 451/451 (100 %) | 0 diff (100 %id) | ||
AA902810 | pooled germ cell tumors | .i | 1659 to 2060 | 402 to 1 | 402/402 (100 %) | 0 diff (100 %id) | |||
AA995833 | germ cell tumor | .d | 1213 to 1643 | 430 to 1 | 430/430 (100 %) | 2 diff (99.6 %id) | |||
AI051856 | .i | 1661 to 2065 | 407 to 4 | 404/407 (99 %) | 0 diff (100 %id) | ||||
AI092616 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .i | 1634 to 2062 | 429 to 1 | 429/438 (97 %) | 1 diff (99.8 %id) | |||
AI125257 | .d | 1267 to 1643 | 378 to 3 | 376/378 (99 %) | 0 diff (100 %id) | ||||
AI288290 | moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus | .d | 1149 to 1643 | 518 to 26 | 493/518 (95 %) | 0 diff (100 %id) | |||
AI364713 | B-cell, chronic lymphotic leukemia | .i | 1389 to 1826 | 438 to 1 | 438/438 (100 %) | 0 diff (100 %id) | |||
AI399974 | B-cell, chronic lymphotic leukemia | .d | 1215 to 1641 | 428 to 2 | 427/428 (99 %) | 0 diff (100 %id) | |||
AI633736 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .i | 1667 to 2060 | 396 to 3 | 394/396 (99 %) | 0 diff (100 %id) | |||
AI433364 | lymph node, lymphoma, follicular mixed small and largecell | .b | 2186 to 2494 | 309 to 1 | 309/309 (100 %) | 0 diff (100 %id) | |||
AI439493 | lymph node, lymphoma, follicular mixed small and largecell | .i | 1352 to 1826 | 475 to 1 | 475/475 (100 %) | 0 diff (100 %id) | |||
AI624251 | adenocarcinoma, Pancreas | .d | 1298 to 1642 | 345 to 1 | 345/345 (100 %) | 0 diff (100 %id) | |||
AI819639 | lymph node, lymphoma, follicular mixed small and largecell | .i | 1351 to 1826 | 476 to 1 | 476/476 (100 %) | 0 diff (100 %id) | |||
AI865144 | lymph node, lymphoma, follicular mixed small and largecell | .d | 1327 to 1641 | 316 to 2 | 315/316 (99 %) | 0 diff (100 %id) | |||
AI936701 | anaplastic oligodendroglioma, brain | .d | 1140 to 1642 | 503 to 1 | 503/503 (100 %) | 0 diff (100 %id) | |||
AW075771 | myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood | .i | 1831 to 2061 | 231 to 1 | 231/231 (100 %) | 0 diff (100 %id) | |||
AW296987 | .d | 1222 to 1642 | 438 to 18 | AAA | 421/421 (100 %) | 1 diff (99.8 %id) | |||
AW418839 | 2 pooled tumors (clear cell type), Kidney | .d | 1340 to 1640 | 305 to 5 | 301/305 (98 %) | 0 diff (100 %id) | |||
AW406569 | lymph | .d | 1023 to 1641 | 8 to 626 | 619/626 (98 %) | 6 diff (99.1 %id) | |||
CB049044 | Prostate | .i | 1541 to 2061 | 544 to 24 | fully sequenced, AAA | 521/521 (100 %) | 0 diff (100 %id) | ||
CB049045 | Prostate | .i | 1310 to 1571 | 10 to 271 | fully sequenced, | 262/271 (96 %) | 6 diff (97.8 %id) | ||
BE258655 | eye, retinoblastoma | .i | 1 to 627 | 33 to 658 | tiling clone, | 626/658 (95 %) | 6 diff (99.1 %id) | ||
BF941832 | fibrotheoma, ovary | .d | 1289 to 1643 | 355 to 1 | tiling clone, | 355/355 (100 %) | 0 diff (100 %id) | ||
BE784330 | large cell carcinoma, lung | .i | 1377 to 2022 | 1 to 651 | 651/694 (93 %) | 15 diff (97.9 %id) | |||
BE784703 | large cell carcinoma, lung | .i | 1378 to 1930 | 1 to 576 | 543/577 (94 %) | 24 diff (95.9 %id) | |||
BE786173 | large cell carcinoma, lung | .f | 128 to 874 | 8 to 757 | 750/779 (96 %) | 35 diff (95.6 %id) | |||
BE790209 | large cell carcinoma, lung | .f | 281 to 875 | 1 to 593 | 593/596 (99 %) | 5 diff (99.2 %id) | |||
BF342683 | brain, glioblastoma with EGFR amplification | .c | 35 to 563 | 5 to 537 | 533/537 (99 %) | 18 diff (96.7 %id) | |||
BF337501 | brain, glioblastoma with EGFR amplification | .i | 1129 to 1803 | 13 to 693 | 681/934 (72 %) | 20 diff (97.9 %id) | |||
BF976109 | B-cells, primary B-cells from tonsils (cell line) | .g | 255 to 1040 | 1 to 784 | 784/791 (99 %) | 24 diff (97.0 %id) | |||
BG340708 | B-cells, primary B-cells from tonsils (cell line) | .c | 42 to 794 | 1 to 748 | 748/748 (100 %) | 14 diff (98.2 %id) | |||
BG436646 | large cell carcinoma, lung | .d | 49 to 445 | 1 to 399 | 399/888 (44 %) | 9 diff (99.0 %id) | |||
BG490508 | large cell carcinoma, lung | .j | 1 to 695 | 1 to 696 | P87T L120W F187L K197E F198V ... | tiling clone, | 696/699 (99 %) | 11 diff (98.5 %id) | |
BG686083 | B-cells, primary B-cells from tonsils (cell line) | .f | 251 to 988 | 11 to 747 | 740/754 (98 %) | 20 diff (97.4 %id) | |||
BG720071 | testis | .c | 28 to 754 | 1 to 727 | 727/731 (99 %) | 5 diff (99.4 %id) | |||
BG718651 | testis | .n | 1 to 693 | 8 to 698 | P24H H25T Q26S S27L Q28R ... | tiling clone, | 691/699 (98 %) | 9 diff (98.8 %id) | |
BG757629 | B-cells, primary B-cells from tonsils (cell line) | .i | 1394 to 2061 | 1 to 671 | 671/742 (90 %) | 12 diff (98.4 %id) | |||
BG759469 | B-cells, primary B-cells from tonsils (cell line) | .c | 40 to 778 | 1 to 741 | 741/741 (100 %) | 7 diff (99.1 %id) | |||
BG757499 | B-cells, primary B-cells from tonsils (cell line) | .f | 251 to 959 | 11 to 717 | tiling clone, | 710/718 (98 %) | 7 diff (99.1 %id) | ||
BG756422 | B-cells, primary B-cells from tonsils (cell line) | .i | 1206 to 2010 | 1 to 806 | 806/806 (100 %) | 7 diff (99.2 %id) | |||
BI261820 | lymph, lymphoma, cell line | .g | 70 to 731 | 1 to 661 | 661/661 (100 %) | 4 diff (99.4 %id) | |||
BI262491 | lymph, lymphoma, cell line | .g | 968 to 1486 | 542 to 24 | tiling clone, | 519/542 (95 %) | 0 diff (100 %id) | ||
BI825974 | brain, medulla | .k | 1 to 816 | 1 to 814 | exact | tiling clone, | 814/814 (100 %) | 6 diff (99.3 %id) | |
BI831671 | brain, medulla | .c | 14 to 817 | 1 to 811 | 811/812 (99 %) | 22 diff (97.3 %id) | |||
BI770180 | pooled lung and spleen | .d | 64 to 877 | 1 to 815 | 815/980 (83 %) | 9 diff (99.1 %id) | |||
BI769676 | pooled lung and spleen | .d | 1307 to 1642 | 1 to 335 | AAA | 335/335 (100 %) | 1 diff (99.8 %id) | ||
BI834245 | pooled pancreas and spleen | .i | 1214 to 2078 | 1 to 864 | 864/926 (93 %) | 10 diff (99.0 %id) | |||
BI834554 | pooled pancreas and spleen | .c | 41 to 807 | 1 to 771 | 771/822 (93 %) | 28 diff (96.6 %id) | |||
BM564174 | blood, natural killer cells, cell line | .f | 255 to 995 | 1 to 741 | 741/1108 (66 %) | 12 diff (99.0 %id) | |||
BM476403 | lymph, lymphoma, cell line | .g | 149 to 1097 | 1 to 965 | E235X | tiling clone, | 965/970 (99 %) | 25 diff (97.5 %id) | |
BM466354 | embryonal carcinoma, cell line, testis | .b | 548 to 1030 | 18 to 502 | 485/1266 (38 %) | 16 diff (98.8 %id) | |||
BM543473 | brain, hippocampus | .d | 71 to 956 | 1 to 902 | 902/1009 (89 %) | 30 diff (97.1 %id) | |||
BM926724 | pooled lung and spleen | .c | 35 to 1070 | 10 to 1042 | A240R K241Q I242N E253G E255K ... | 1036/1110 (93 %) | 15 diff (98.7 %id) | ||
BQ069060 | brain, neuroblastoma, cell line | .h | 1 to 962 | 1 to 970 | V209X A210G R211P I212D I213H ... | tiling clone, | 970/1031 (94 %) | 15 diff (98.6 %id) | |
BQ020897 | lung, Metastatic Chondrosarcoma | .d | 1003 to 1642 | 659 to 19 | AAA | 641/641 (100 %) | 3 diff (99.6 %id) | ||
BM998357 | lung, Metastatic Chondrosarcoma | .i | 1490 to 2086 | 615 to 19 | AAA | 597/609 (98 %) | 14 diff (97.8 %id) | ||
BQ052657 | blood, natural killer cells, cell line | .g | 130 to 1021 | 1 to 893 | E235X E251* | tiling clone, | 893/1033 (86 %) | 12 diff (98.9 %id) | |
BQ421787 | large cell carcinoma, lung | .d | 63 to 834 | 9 to 788 | 780/870 (89 %) | 20 diff (97.8 %id) | |||
BQ227004 | large cell carcinoma, lung | .d | 48 to 790 | 1 to 749 | 749/833 (89 %) | 12 diff (98.6 %id) | |||
BQ233898 | large cell carcinoma, lung | .i | 886 to 1758 | 1 to 875 | 875/876 (99 %) | 10 diff (98.9 %id) | |||
BU899218 | Spleen | .d | 52 to 834 | 1 to 785 | 785/887 (88 %) | 5 diff (99.5 %id) | |||
BQ712125 | Spleen | .d | 52 to 602 | 1 to 555 | 555/996 (55 %) | 9 diff (99.1 %id) | |||
BQ706093 | Spleen | .d | 52 to 655 | 1 to 607 | 605/980 (61 %) | 12 diff (98.8 %id) | |||
BQ710309 | Spleen | .f | 8 to 816 | 2 to 816 | 815/947 (86 %) | 20 diff (97.9 %id) | |||
BQ707764 | Spleen | .f | 18 to 852 | 1 to 845 | 845/926 (91 %) | 23 diff (97.6 %id) | |||
BQ643409 | lymph, lymphoma, cell line | .g | 72 to 1047 | 1 to 987 | Y22C K212X Q217P L239P N240Y | 987/994 (99 %) | 30 diff (97.0 %id) | ||
BQ939625 | large cell carcinoma, lung | .f | 128 to 769 | 7 to 649 | 643/954 (67 %) | 17 diff (98.3 %id) | |||
BU595990 | mixed (pool of 40 RNAs) | .g | 1 to 757 | 1 to 761 | tiling clone, | 761/788 (96 %) | 14 diff (98.3 %id) | ||
BU957917 | mixed (pool of 40 RNAs) | .d | 1349 to 1634 | 1 to 286 | 286/326 (87 %) | 4 diff (98.8 %id) | |||
CX872469 | embryonic stem | .c | 42 to 767 | 1 to 726 | 726/726 (100 %) | 0 diff (100 %id) | |||
CD517901 | White Matter | .e | 1 to 769 | 1 to 773 | K233* | tiling clone, | 773/917 (84 %) | 8 diff (99.2 %id) | |
TI_57178100 | .d | 60 to 877 | 27 to 845 | 819/1010 (81 %) | 14 diff (98.7 %id) | ||||
TI_57179479 | .d | 1305 to 1642 | 28 to 364 | AAA | 337/364 (92 %) | 6 diff (98.4 %id) | |||
TI_57173818 | .k | 1 to 816 | 32 to 845 | exact | 814/845 (96 %) | 10 diff (98.9 %id) | |||
TI_57175549 | .c | 14 to 817 | 68 to 878 | 811/879 (92 %) | 30 diff (96.6 %id) | ||||
TI_57163706 | .i | 1214 to 2078 | 31 to 894 | AAA | 864/947 (91 %) | 16 diff (98.4 %id) | |||
TI_57167735 | .c | 35 to 807 | 65 to 841 | 777/892 (87 %) | 34 diff (96.2 %id) | ||||
CB162302 | Liver | .i | 1164 to 1797 | 1 to 634 | 634/634 (100 %) | 1 diff (99.9 %id) | |||
BP298014 | .c | 29 to 578 | 1 to 550 | 550/550 (100 %) | 10 diff (98.2 %id) | ||||
BP302106 | .c | 27 to 604 | 1 to 578 | 578/581 (99 %) | 7 diff (98.8 %id) | ||||
BP302710 | .i | 1588 to 2061 | 1 to 474 | AAA | 474/474 (100 %) | 2 diff (99.6 %id) | |||
BP306785 | .c | 27 to 606 | 1 to 580 | 580/580 (100 %) | 2 diff (99.7 %id) | ||||
NM_032369.2 | .c | 1 to 1711 | 1 to 1711 | exact | RefSeq, | 1711/1711 (100 %) | 0 diff (100 %id) | ||
NM_001040107.1 | .d | 1 to 1736 | 1 to 1736 | exact | RefSeq, | 1736/1736 (100 %) | 0 diff (100 %id) | ||
DC380247 | placenta | .f | 31 to 583 | 1 to 553 | 553/553 (100 %) | 0 diff (100 %id) | |||
TI_1948102311 | .d | 182 to 908 | 123 to 854 | fully sequenced, | 732/854 (85 %) | 9 diff (99.0 %id) | |||
TI_1948102312 | .d | 878 to 1011 | 256 to 124 | fully sequenced, | 133/160 (83 %) | 0 diff (100 %id) | |||
TI_1948102649 | .d | 182 to 632 | 121 to 571 | fully sequenced, | 451/571 (78 %) | 5 diff (99.2 %id) | |||
TI_1948102650 | .d | 571 to 1011 | 567 to 127 | fully sequenced, | 441/567 (77 %) | 0 diff (100 %id) | |||
TI_1948102811 | .d | 182 to 632 | 119 to 570 | fully sequenced, | 452/570 (79 %) | 6 diff (99.0 %id) | |||
TI_1948102812 | .d | 571 to 1011 | 564 to 124 | fully sequenced, | 441/564 (78 %) | 0 diff (100 %id) | |||
TI_1948237423 | .i | 737 to 1455 | 129 to 849 | 719/1245 (57 %) | 18 diff (98.6 %id) | ||||
TI_1948237424 | .i | 737 to 1459 | 128 to 851 | E188D S211G Q217P E220* | 724/1240 (58 %) | 16 diff (98.8 %id) | |||
TI_1948237425 | .i | 939 to 1455 | 641 to 123 | 519/1348 (38 %) | 6 diff (99.6 %id) | ||||
TI_1948237426 | .i | 1194 to 1455 | 386 to 125 | 262/289 (90 %) | 0 diff (100 %id) | ||||
TI_1948237647 | .i | 737 to 1392 | 128 to 789 | 662/1377 (48 %) | 24 diff (98.3 %id) | ||||
TI_1948237648 | .i | 737 to 974 | 129 to 366 | 238/257 (92 %) | 5 diff (98.1 %id) | ||||
TI_1948237650 | .i | 1108 to 1455 | 471 to 124 | 348/375 (92 %) | 0 diff (100 %id) | ||||
TI_1948237873 | .i | 737 to 1455 | 131 to 852 | 722/1273 (56 %) | 17 diff (98.7 %id) | ||||
TI_1948237874 | .i | 737 to 1455 | 124 to 842 | 719/1263 (56 %) | 13 diff (99.0 %id) | ||||
TI_1948237875 | .i | 1101 to 1455 | 479 to 125 | 355/382 (92 %) | 0 diff (100 %id) | ||||
TI_1948238106 | .i | 737 to 1397 | 129 to 797 | 669/1307 (51 %) | 21 diff (98.4 %id) | ||||
TI_1948238107 | .i | 737 to 1370 | 126 to 769 | 644/1382 (46 %) | 28 diff (98.0 %id) | ||||
TI_1948238108 | .i | 1127 to 1455 | 453 to 125 | 329/356 (92 %) | 0 diff (100 %id) | ||||
BP340417 | Spleen | .c | 28 to 607 | 1 to 580 | 580/580 (100 %) | 0 diff (100 %id) | |||
DC396748 | testis | .d | 55 to 604 | 1 to 550 | 550/555 (99 %) | 2 diff (99.7 %id) | |||
DC397693 | testis | .l | 1 to 575 | 1 to 577 | exact | tiling clone, | 577/577 (100 %) | 2 diff (99.7 %id) | |
DC397842 | testis | .m | 65 to 606 | 1 to 547 | tiling clone, | 547/547 (100 %) | 5 diff (99.1 %id) | ||
DB053380 | testis | .b | 1 to 570 | 2 to 571 | tiling clone, capped | 570/570 (100 %) | 0 diff (100 %id) | ||
DB338734 | testis | .b | 2192 to 2734 | 544 to 1 | 544/544 (100 %) | 2 diff (99.7 %id) | |||
DC399559 | testis | .p | 1 to 536 | 4 to 539 | exact | tiling clone, | 539/539 (100 %) | 0 diff (100 %id) | |
DC399719 | testis | .m | 1 to 483 | 1 to 483 | R44W | tiling clone, | 483/483 (100 %) | 1 diff (99.8 %id) | |
TI_154144202 | .d | 1023 to 1641 | 80 to 698 | 619/623 (99 %) | 1 diff (99.9 %id) | ||||
TI_154188379 | .f | 37 to 983 | 123 to 1060 | 940/938 (100 %) | 19 diff (98.0 %id) | ||||
BM709214 | eye, optic nerve | .i | 1409 to 1964 | 1 to 556 | 556/556 (100 %) | 0 diff (100 %id) | |||
BP375483 | uterus | .d | 1 to 561 | 1 to 561 | tiling clone, | 561/561 (100 %) | 0 diff (100 %id) | ||
BP208308 | cerebellum | .d | 1349 to 1634 | 1 to 286 | Suspected internal deletion, this clone was ignored | 286/326 (87 %) | 4 diff (98.8 %id) | ||
DB452903. matches multiple genes | testis | .c | 42 to 767 | 1 to 726 | Suspected internal deletion, this clone was ignored, also hits gene TCTN1 | 726/726 (100 %) | 0 diff (100 %id) | ||
DB452903. matches multiple genes | testis | .e | 1 to 769 | 1 to 773 | tiling clone, | Suspected internal deletion, this clone was ignored, also hits gene TCTN1 | 773/917 (84 %) | 8 diff (99.2 %id) | |
DB518361. matches multiple genes | testis | .d | 60 to 877 | 27 to 845 | Suspected internal deletion, this clone was ignored, also hits gene TCTN1 | 819/1010 (81 %) | 14 diff (98.7 %id) | ||
DB518361. matches multiple genes | testis | .d | 1305 to 1642 | 28 to 364 | Suspected internal deletion, this clone was ignored, also hits gene TCTN1 | 337/364 (92 %) | 6 diff (98.4 %id) | ||
BE787139 | large cell carcinoma, lung | .k | 1 to 816 | 32 to 845 | Suspected internal deletion, this clone was ignored | 814/845 (96 %) | 10 diff (98.9 %id) | ||
BG772095 | testis | .c | 14 to 817 | 68 to 878 | This clone was ignored | 811/879 (92 %) | 30 diff (96.6 %id) | ||
BU959497 | mixed (pool of 40 RNAs) | .i | 1214 to 2078 | 31 to 894 | Suspected internal deletion, this clone was ignored | 864/947 (91 %) | 16 diff (98.4 %id) | ||
DC396831 | testis | .c | 35 to 807 | 65 to 841 | Suspected internal deletion, this clone was ignored | 777/892 (87 %) | 34 diff (96.2 %id) | ||
DB084500 | testis | .i | 1164 to 1797 | 1 to 634 | capped | This clone was ignored | 634/634 (100 %) | 1 diff (99.9 %id) | |
DB341044 | testis | .c | 29 to 578 | 1 to 550 | This clone was ignored | 550/550 (100 %) | 10 diff (98.2 %id) | ||
BP369986 | testis | .c | 27 to 604 | 1 to 578 | Suspected internal deletion, this clone was ignored | 578/581 (99 %) | 7 diff (98.8 %id) | ||
BP302710 | .i | 1588 to 2061 | 1 to 474 | AAA | 474/474 (100 %) | 2 diff (99.6 %id) | |||
BP306785 | .c | 27 to 606 | 1 to 580 | 580/580 (100 %) | 2 diff (99.7 %id) | ||||
NM_032369.2 | .c | 1 to 1711 | 1 to 1711 | exact | RefSeq, | 1711/1711 (100 %) | 0 diff (100 %id) | ||
NM_001040107.1 | .d | 1 to 1736 | 1 to 1736 | exact | RefSeq, | 1736/1736 (100 %) | 0 diff (100 %id) | ||
DC380247 | placenta | .f | 31 to 583 | 1 to 553 | 553/553 (100 %) | 0 diff (100 %id) | |||
TI_1948102311 | .d | 182 to 908 | 123 to 854 | fully sequenced, | 732/854 (85 %) | 9 diff (99.0 %id) | |||
TI_1948102312 | .d | 878 to 1011 | 256 to 124 | fully sequenced, | 133/160 (83 %) | 0 diff (100 %id) | |||
TI_1948102649 | .d | 182 to 632 | 121 to 571 | fully sequenced, | 451/571 (78 %) | 5 diff (99.2 %id) | |||
TI_1948102650 | .d | 571 to 1011 | 567 to 127 | fully sequenced, | 441/567 (77 %) | 0 diff (100 %id) | |||
TI_1948102811 | .d | 182 to 632 | 119 to 570 | fully sequenced, | 452/570 (79 %) | 6 diff (99.0 %id) | |||
TI_1948102812 | .d | 571 to 1011 | 564 to 124 | fully sequenced, | 441/564 (78 %) | 0 diff (100 %id) | |||
TI_1948237423 | .i | 737 to 1455 | 129 to 849 | 719/1245 (57 %) | 18 diff (98.6 %id) | ||||
TI_1948237424 | .i | 737 to 1459 | 128 to 851 | E188D S211G Q217P E220* | 724/1240 (58 %) | 16 diff (98.8 %id) | |||
TI_1948237425 | .i | 939 to 1455 | 641 to 123 | 519/1348 (38 %) | 6 diff (99.6 %id) | ||||
TI_1948237426 | .i | 1194 to 1455 | 386 to 125 | 262/289 (90 %) | 0 diff (100 %id) | ||||
TI_1948237647 | .i | 737 to 1392 | 128 to 789 | 662/1377 (48 %) | 24 diff (98.3 %id) | ||||
TI_1948237648 | .i | 737 to 974 | 129 to 366 | 238/257 (92 %) | 5 diff (98.1 %id) | ||||
TI_1948237650 | .i | 1108 to 1455 | 471 to 124 | 348/375 (92 %) | 0 diff (100 %id) | ||||
TI_1948237873 | .i | 737 to 1455 | 131 to 852 | 722/1273 (56 %) | 17 diff (98.7 %id) | ||||
TI_1948237874 | .i | 737 to 1455 | 124 to 842 | 719/1263 (56 %) | 13 diff (99.0 %id) | ||||
TI_1948237875 | .i | 1101 to 1455 | 479 to 125 | 355/382 (92 %) | 0 diff (100 %id) | ||||
TI_1948238106 | .i | 737 to 1397 | 129 to 797 | 669/1307 (51 %) | 21 diff (98.4 %id) | ||||
TI_1948238107 | .i | 737 to 1370 | 126 to 769 | 644/1382 (46 %) | 28 diff (98.0 %id) | ||||
TI_1948238108 | .i | 1127 to 1455 | 453 to 125 | 329/356 (92 %) | 0 diff (100 %id) | ||||
BP340417 | Spleen | .c | 28 to 607 | 1 to 580 | 580/580 (100 %) | 0 diff (100 %id) | |||
DC396748 | testis | .d | 55 to 604 | 1 to 550 | 550/555 (99 %) | 2 diff (99.7 %id) | |||
DC397693 | testis | .l | 1 to 575 | 1 to 577 | exact | tiling clone, | 577/577 (100 %) | 2 diff (99.7 %id) | |
DC397842 | testis | .m | 65 to 606 | 1 to 547 | tiling clone, | 547/547 (100 %) | 5 diff (99.1 %id) | ||
DB053380 | testis | .b | 1 to 570 | 2 to 571 | tiling clone, capped | 570/570 (100 %) | 0 diff (100 %id) | ||
DB338734 | testis | .b | 2192 to 2734 | 544 to 1 | 544/544 (100 %) | 2 diff (99.7 %id) | |||
DC399559 | testis | .p | 1 to 536 | 4 to 539 | exact | tiling clone, | 539/539 (100 %) | 0 diff (100 %id) | |
DC399719 | testis | .m | 1 to 483 | 1 to 483 | R44W | tiling clone, | 483/483 (100 %) | 1 diff (99.8 %id) | |
TI_154144202 | .d | 1023 to 1641 | 80 to 698 | 619/623 (99 %) | 1 diff (99.9 %id) | ||||
TI_154188379 | .f | 37 to 983 | 123 to 1060 | 940/938 (100 %) | 19 diff (98.0 %id) | ||||
BM709214 | eye, optic nerve | .i | 1409 to 1964 | 1 to 556 | 556/556 (100 %) | 0 diff (100 %id) | |||
BM709214 | eye, optic nerve | .i | 1409 to 1964 | 1 to 556 | 556/556 (100 %) | 0 diff (100 %id) | |||
BP375483 | uterus | .d | 1 to 561 | 1 to 561 | tiling clone, | 561/561 (100 %) | 0 diff (100 %id) |