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Gene ZBTB44TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
397 supporting clones for gene ZBTB44 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC030580 testis .a 1 to 2436 10 to 2448 F496L tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 2442/2442
(100 %)
3 diff
(99.9 %id)
CT004084 T-Lymphocytes .a 807 to 1641 1 to 835       835/835
(100 %)
0 diff
(100 %id)
TI_1948147063   .a 892 to 1984 1236 to 121       1116/1237
(90 %)
56 diff
(95.5 %id)
TI_1948147712   .a 927 to 1984 1196 to 123       1074/1201
(89 %)
49 diff
(96.0 %id)
TI_1948148037   .a 980 to 1984 1133 to 121       1013/1249
(81 %)
27 diff
(97.9 %id)
TI_1948147382   .a 1018 to 1984 1100 to 118       983/1208
(81 %)
43 diff
(96.5 %id)
CR989555 T-Lymphocytes .a 1065 to 1956 1 to 893   tiling clone,   893/893
(100 %)
2 diff
(99.8 %id)
TI_1948148036   .a 1088 to 1984 1017 to 117       901/1217
(74 %)
14 diff
(98.9 %id)
TI_149280834   .a 1119 to 1921 884 to 91   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 794/885
(89 %)
21 diff
(97.7 %id)
TI_1948147383   .a 1186 to 1984 921 to 122       800/1307
(61 %)
11 diff
(99.2 %id)
TI_1948147711   .a 1284 to 1984 820 to 118       703/1227
(57 %)
3 diff
(99.8 %id)
BM969910 lung, Primary Lung Epithelial Cells .a 1319 to 1921 619 to 17   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 603/619
(97 %)
0 diff
(100 %id)
TI_1948147062   .a 1366 to 1984 740 to 117       624/1188
(52 %)
20 diff
(98.4 %id)
BG220245   .a 1949 to 2764 1 to 813   tiling clone,   813/813
(100 %)
32 diff
(96.1 %id)
DB455246 testis .b 1 to 471 1 to 471   tiling clone,   471/471
(100 %)
0 diff
(100 %id)
BC050723 Liver, adenocarcinoma .b 245 to 2095 1 to 1851 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1851/1851
(100 %)
0 diff
(100 %id)
BC049375 testis .c 1 to 3844 1 to 3848 K185E tiling clone, available from MGC, AAA   3848/3848
(100 %)
6 diff
(99.9 %id)
TI_1948156298   .c 286 to 918 131 to 776   fully sequenced,   646/776
(83 %)
6 diff
(99.3 %id)
TI_1948156468   .c 286 to 915 125 to 753   fully sequenced,   629/753
(83 %)
6 diff
(99.3 %id)
TI_1948156646   .c 286 to 892 121 to 725   fully sequenced,   605/725
(83 %)
6 diff
(99.2 %id)
TI_1948156822   .c 286 to 917 121 to 752   fully sequenced,   632/752
(84 %)
6 diff
(99.3 %id)
TI_1948156647   .c 862 to 1702 956 to 121   fully sequenced,   836/956
(87 %)
4 diff
(99.6 %id)
TI_1948156469   .c 885 to 1702 956 to 123   fully sequenced,   834/956
(87 %)
10 diff
(99.0 %id)
TI_1948156823   .c 887 to 1702 935 to 122   fully sequenced,   814/935
(87 %)
4 diff
(99.6 %id)
TI_1948156299   .c 888 to 1702 948 to 121   fully sequenced,   828/948
(87 %)
5 diff
(99.5 %id)
X85653   .c 1594 to 1899 306 to 1       306/309
(99 %)
4 diff
(98.8 %id)
TI_57244174   .c 2124 to 2775 33 to 691       659/828
(79 %)
17 diff
(98.0 %id)
AV687852 hepatocellular carcinoma .c 2198 to 2737 8 to 547       540/673
(80 %)
4 diff
(99.5 %id)
BF224133 carcinoid, lung .c 2201 to 2740 540 to 1       540/540
(100 %)
0 diff
(100 %id)
BG546630 lung .c 2250 to 2918 1 to 666       666/666
(100 %)
5 diff
(99.3 %id)
BG896604 cartilage .c 2273 to 2610 85 to 422       338/354
(95 %)
6 diff
(98.4 %id)
DR761369 embryonic stem .c 2278 to 3015 1 to 737       737/737
(100 %)
1 diff
(99.9 %id)
T27049   .c 2282 to 2722 1 to 440       440/445
(98 %)
12 diff
(97.4 %id)
H08244 whole brain .c 2283 to 2661 1 to 383       383/390
(98 %)
8 diff
(98.0 %id)
R19116 whole brain .c 2321 to 2728 1 to 420       420/421
(99 %)
22 diff
(94.8 %id)
AI902197 breast .c 2347 to 2682 1 to 336       336/336
(100 %)
2 diff
(99.5 %id)
BU075835 insulinoma, Pancreas .c 2381 to 2960 8 to 587       580/587
(98 %)
6 diff
(99.0 %id)
CB995710 placenta, pre-eclamptic placenta .c 2409 to 3165 28 to 792       765/818
(93 %)
17 diff
(98.0 %id)
CB957072 Pooled-Glandular .c 2428 to 3118 1 to 694       694/751
(92 %)
7 diff
(99.1 %id)
BX096280 breast .c 2465 to 3244 1 to 778   tiling clone,   778/778
(100 %)
2 diff
(99.8 %id)
H25333 breast .c 2481 to 2869 1 to 398       398/407
(97 %)
15 diff
(96.4 %id)
BF672158 muscle (skeletal) .c 2513 to 2998 1 to 485       485/485
(100 %)
1 diff
(99.8 %id)
AI742705 pooled .c 2565 to 3025 25 to 486     Submitted on the opposite strand 462/486
(95 %)
6 diff
(98.8 %id)
BG613759 embryonal carcinoma, testis .c 2586 to 3412 1 to 821       821/822
(99 %)
26 diff
(96.9 %id)
AA480979 germinal center B cell .c 2598 to 2987 1 to 390     Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 390/390
(100 %)
0 diff
(100 %id)
CA391236 eye, RPE/choroid .c 2622 to 3116 1 to 495       495/495
(100 %)
0 diff
(100 %id)
AW663230 2 pooled high-grade transitional celltumors, genitourinary tract .c 2635 to 2967 10 to 341       332/342
(97 %)
6 diff
(98.3 %id)
BG676483 skin, squamous cell carcinoma .c 2688 to 3413 1 to 721       721/721
(100 %)
5 diff
(99.4 %id)
BF342772 brain, glioblastoma with EGFR amplification .c 2692 to 3463 13 to 782       770/811
(94 %)
33 diff
(96.0 %id)
BG506770 lung .c 2708 to 3491 1 to 780       780/780
(100 %)
14 diff
(98.3 %id)
BG741521 skin .c 2721 to 3560 1 to 838       838/838
(100 %)
16 diff
(98.1 %id)
AA902114 carcinoid, lung .c 2766 to 3254 1 to 489     Submitted on the opposite strand 489/489
(100 %)
0 diff
(100 %id)
BG255836 adenocarcinoma, cell line, Prostate .c 2835 to 3531 1 to 691       691/928
(74 %)
34 diff
(96.4 %id)
BF575291 muscle (skeletal) .c 2859 to 3534 1 to 670       670/884
(75 %)
27 diff
(97.0 %id)
R99557 liver and spleen .c 2936 to 3328 1 to 407       407/446
(91 %)
14 diff
(96.9 %id)
TI_154126452   .c 2952 to 3841 958 to 76   AAA   883/986
(89 %)
16 diff
(98.4 %id)
AA262468 germinal center B cell .c 2958 to 3398 7 to 447   fully sequenced,   441/447
(98 %)
6 diff
(98.7 %id)
AI268093 carcinoid, lung .c 3007 to 3409 1 to 404     Submitted on the opposite strand 404/404
(100 %)
1 diff
(99.8 %id)
BQ014470 Chondrosarcoma, Left Pubic Bone .c 3072 to 3841 787 to 19   AAA   769/769
(100 %)
3 diff
(99.7 %id)
AA318381 Spleen .c 3185 to 3520 1 to 333       333/333
(100 %)
3 diff
(99.1 %id)
AW964419   .c 3186 to 3837 1 to 653       653/653
(100 %)
11 diff
(98.4 %id)
BU075640 insulinoma, Pancreas .c 3220 to 3824 605 to 1       605/605
(100 %)
0 diff
(100 %id)
BI043753 ovary .c 3222 to 3467 1 to 246       246/246
(100 %)
1 diff
(99.6 %id)
AA480980 germinal center B cell .c 3233 to 3619 414 to 28   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 387/387
(100 %)
0 diff
(100 %id)
BG253884 adenocarcinoma, cell line, Prostate .c 3244 to 3841 1 to 589       589/615
(95 %)
14 diff
(97.8 %id)
CA448931 Chondrosarcoma, Left Pelvis .c 3251 to 3844 610 to 16   AAA   595/597
(99 %)
1 diff
(99.9 %id)
BF090081 nervous_normal .c 3263 to 3808 546 to 3       544/547
(99 %)
0 diff
(100 %id)
BQ276982 mixed (pool of 40 RNAs) .c 3270 to 3850 1 to 585       585/912
(64 %)
8 diff
(99.2 %id)
BE645015 pooled .c 3286 to 3841 567 to 12   AAA   556/556
(100 %)
1 diff
(99.9 %id)
CB962083 Blood vessels - aorta, basilar and artery .c 3297 to 3844 1 to 547       547/552
(99 %)
2 diff
(99.7 %id)
AI760814 2 pooled tumors (clear cell type), Kidney .c 3315 to 3843 531 to 3       529/531
(99 %)
0 diff
(100 %id)
AI890488 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 3315 to 3844 531 to 1       531/531
(100 %)
1 diff
(99.9 %id)
AW131517 brain, medulloblastoma .c 3325 to 3736 412 to 1       412/412
(100 %)
10 diff
(97.6 %id)
AW027111 thymus, pooled .c 3327 to 3843 519 to 3       517/519
(99 %)
0 diff
(100 %id)
N52170 multiple sclerosis lesions .c 3342 to 3844 506 to 1       506/511
(99 %)
5 diff
(99.1 %id)
AI983688 adenocarcinoma, Pancreas .c 3356 to 3841 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AA262469 germinal center B cell .c 3368 to 3844 477 to 1   fully sequenced,   477/477
(100 %)
2 diff
(99.6 %id)
DB520655 testis .c 3380 to 3844 1 to 465     Submitted on the opposite strand 465/465
(100 %)
2 diff
(99.6 %id)
AW673191 cervical carcinoma cell line, cervix .c 3383 to 3848 466 to 1       466/466
(100 %)
0 diff
(100 %id)
AI640811 adenocarcinoma, Pancreas .c 3391 to 3841 451 to 1       451/451
(100 %)
0 diff
(100 %id)
AA975084 Kidney .c 3394 to 3852 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AI925598 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 3401 to 3844 460 to 17   AAA   444/444
(100 %)
0 diff
(100 %id)
DB518126 testis .c 3407 to 3841 1 to 435     Submitted on the opposite strand 435/435
(100 %)
0 diff
(100 %id)
TI_154158721   .c 3414 to 3846 90 to 522       433/528
(82 %)
6 diff
(98.9 %id)
AW502955 lymph .c 3420 to 3840 14 to 434       421/434
(97 %)
6 diff
(98.7 %id)
AW615015 2 pooled high-grade transitional celltumors, genitourinary tract .c 3426 to 3843 418 to 1       418/418
(100 %)
0 diff
(100 %id)
AA700718 liver and spleen .c 3443 to 3841 399 to 1       399/399
(100 %)
0 diff
(100 %id)
AI989464 thymus, pooled .c 3444 to 3843 400 to 1       400/400
(100 %)
0 diff
(100 %id)
AA848049 germinal center B cell .c 3452 to 3844 406 to 14   AAA   393/393
(100 %)
0 diff
(100 %id)
H25290 breast .c 3456 to 3825 376 to 1       376/376
(100 %)
12 diff
(96.9 %id)
AW772004 Kidney .c 3457 to 3848 392 to 1       392/392
(100 %)
0 diff
(100 %id)
AI383734   .c 3459 to 3843 388 to 4       385/388
(99 %)
0 diff
(100 %id)
AI476279 Kidney .c 3459 to 3841 411 to 29   AAA   383/383
(100 %)
13 diff
(96.7 %id)
AA805998 germinal center B cell .c 3467 to 3844 388 to 11   AAA   378/378
(100 %)
0 diff
(100 %id)
AA813872 germinal center B cell .c 3469 to 3772 304 to 1       304/304
(100 %)
0 diff
(100 %id)
AA741272 germinal center B cell .c 3478 to 3848 375 to 5       371/375
(98 %)
0 diff
(100 %id)
AI887245 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 3482 to 3844 399 to 37   AAA   363/363
(100 %)
17 diff
(95.4 %id)
AW168066 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 3482 to 3843 366 to 5       362/366
(98 %)
0 diff
(100 %id)
AA258175 germinal center B cell .c 3484 to 3847 364 to 1       364/364
(100 %)
0 diff
(100 %id)
AA700081 liver and spleen .c 3489 to 3841 353 to 1       353/353
(100 %)
0 diff
(100 %id)
R99558 liver and spleen .c 3503 to 3819 320 to 1       320/320
(100 %)
4 diff
(98.8 %id)
H08143 whole brain .c 3504 to 3841 357 to 18   AAA   340/342
(99 %)
7 diff
(98.0 %id)
R44782 whole brain .c 3505 to 3841 355 to 18   AAA   338/338
(100 %)
6 diff
(98.3 %id)
AA279317 germinal center B cell .c 3507 to 3841 335 to 1       335/335
(100 %)
1 diff
(99.8 %id)
BE245523 leukopheresis .c 3530 to 3841 312 to 2       311/312
(99 %)
0 diff
(100 %id)
AI581137 colon, moderately-differentiated adenocarcinoma .c 3563 to 3841 289 to 11   AAA   279/279
(100 %)
2 diff
(99.3 %id)
AI018699   .c 3577 to 3843 269 to 3       267/269
(99 %)
0 diff
(100 %id)
AW022666 cochlea, ear .c 3580 to 3844 1 to 265   AAA   265/265
(100 %)
4 diff
(98.5 %id)
AW020217 cochlea, ear .c 3581 to 3844 1 to 264   fully sequenced, AAA   264/264
(100 %)
4 diff
(98.5 %id)
AW020223 cochlea, ear .c 3581 to 3844 1 to 264   fully sequenced, AAA   264/264
(100 %)
4 diff
(98.5 %id)
AW020624 cochlea, ear .c 3581 to 3844 1 to 264   fully sequenced, AAA   264/264
(100 %)
4 diff
(98.5 %id)
AW021162 cochlea, ear .c 3581 to 3844 1 to 264   fully sequenced, AAA   264/264
(100 %)
4 diff
(98.5 %id)
AW022810 cochlea, ear .c 3581 to 3844 1 to 264   AAA   264/264
(100 %)
4 diff
(98.5 %id)
AW022961 cochlea, ear .c 3581 to 3844 1 to 264   AAA   264/264
(100 %)
4 diff
(98.5 %id)
AW022899 cochlea, ear .c 3581 to 3844 1 to 264   AAA   264/264
(100 %)
4 diff
(98.5 %id)
AI868190 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 3585 to 3841 257 to 1       257/260
(98 %)
0 diff
(100 %id)
BI491142 cochlea, ear .c 3586 to 3828 243 to 1       243/248
(97 %)
0 diff
(100 %id)
AW020110.
matches multiple genes
cochlea, ear .c 3586 to 3844 8 to 266   AAA also hits gene GPT2 259/266
(97 %)
6 diff
(97.8 %id)
AI140524 liver and spleen .c 3587 to 3844 258 to 1       258/258
(100 %)
0 diff
(100 %id)
AI446067 adenocarcinoma, Pancreas .c 3621 to 3844 237 to 14   AAA   224/224
(100 %)
0 diff
(100 %id)
H63232 liver and spleen .c 3625 to 3828 202 to 1       202/202
(100 %)
4 diff
(98.1 %id)
BI491259 cochlea, ear .c 3626 to 3833 208 to 1   fully sequenced,   208/208
(100 %)
0 diff
(100 %id)
BI491267 cochlea, ear .c 3626 to 3844 237 to 19   fully sequenced, AAA   219/219
(100 %)
0 diff
(100 %id)
BI491606 cochlea, ear .c 3626 to 3844 238 to 20   fully sequenced, AAA   219/219
(100 %)
2 diff
(99.1 %id)
AI915478 ovary, tumor, 5 pooled (see description) .c 3629 to 3844 231 to 15   AAA   217/217
(100 %)
1 diff
(99.6 %id)
BI492109 cochlea, ear .c 3756 to 3823 68 to 1   fully sequenced,   68/68
(100 %)
0 diff
(100 %id)
GD153985   .c 3789 to 3841 7 to 59   AAA   53/59
(89 %)
6 diff
(89.9 %id)
DB452683 testis .d 1 to 472 1 to 477   tiling clone,   477/477
(100 %)
5 diff
(99.0 %id)
NM_014155.4   .d 1 to 9338 1 to 9338 exact RefSeq, AAA   9338/9338
(100 %)
0 diff
(100 %id)
TI_43964079   .d 19 to 798 54 to 852       799/894
(89 %)
45 diff
(95.0 %id)
BC071729 Brain, adult medulla .d 27 to 2787 1 to 2766 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base) 2766/2766
(100 %)
5 diff
(99.9 %id)
BI520347 brain, medulla .d 27 to 798 1 to 791       791/833
(94 %)
52 diff
(93.8 %id)
BI459825 testis .d 37 to 713 1 to 683       683/694
(98 %)
29 diff
(95.9 %id)
BG723160 testis .d 120 to 702 1 to 586   tiling clone,   586/587
(99 %)
8 diff
(98.7 %id)
BI460291 testis .d 120 to 725 1 to 609       609/610
(99 %)
6 diff
(99.1 %id)
AK314701 testis .d 128 to 1268 1 to 1144       1144/1144
(100 %)
6 diff
(99.5 %id)
DB082715 testis .d 129 to 683 2 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DR005438 Prostate .d 265 to 974 1 to 708       708/711
(99 %)
8 diff
(98.9 %id)
AL707880 human skeletal muscle .d 268 to 846 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
AV736784 cord Blood .d 278 to 697 39 to 461       423/520
(81 %)
24 diff
(95.4 %id)
DB455769.
matches multiple genes
testis .d 279 to 748 1 to 470     also hits gene nawferby 470/470
(100 %)
0 diff
(100 %id)
DB460624 testis .d 279 to 747 1 to 469       469/469
(100 %)
0 diff
(100 %id)
BQ953305 epidermoid carcinoma, cell line, lung .d 285 to 1100 1 to 831       831/935
(88 %)
31 diff
(96.7 %id)
AW798725 uterus .d 342 to 794 461 to 8       454/461
(98 %)
0 diff
(100 %id)
CN306847 embryonic stem cells, DMSO-treated H9 cellline .d 343 to 708 1 to 367       367/367
(100 %)
1 diff
(99.8 %id)
BF332206 breast .d 349 to 603 257 to 4       254/262
(96 %)
0 diff
(100 %id)
BG121936 adenocarcinoma, cell line, Liver .d 379 to 655 1 to 278       278/278
(100 %)
2 diff
(99.3 %id)
TI_1948147709   .d 384 to 1309 128 to 1061       934/1215
(76 %)
57 diff
(95.4 %id)
TI_1948147710   .d 384 to 1175 120 to 917       798/1447
(55 %)
15 diff
(99.0 %id)
TI_1948147060   .d 386 to 1194 122 to 936       815/1232
(66 %)
6 diff
(99.6 %id)
TI_1948147061   .d 386 to 1249 121 to 1002       882/1375
(64 %)
6 diff
(99.6 %id)
TI_1948147380   .d 386 to 1129 130 to 873       744/1190
(62 %)
6 diff
(99.5 %id)
TI_1948147381   .d 386 to 1269 115 to 1011       897/1412
(63 %)
6 diff
(99.6 %id)
TI_1948148034   .d 386 to 1194 127 to 938       812/1220
(66 %)
6 diff
(99.6 %id)
TI_1948148035   .d 386 to 1237 118 to 986       869/1373
(63 %)
6 diff
(99.6 %id)
TI_1948231114   .d 386 to 1292 132 to 1041       910/1389
(65 %)
6 diff
(99.6 %id)
TI_1948231115   .d 386 to 1335 121 to 1077   AAA   957/1277
(74 %)
6 diff
(99.6 %id)
TI_1948231361   .d 386 to 1320 122 to 1054       933/1220
(76 %)
6 diff
(99.6 %id)
TI_1948231611   .d 386 to 1339 129 to 1088       960/1464
(65 %)
6 diff
(99.6 %id)
TI_1948231612   .d 386 to 1314 118 to 1053       936/1261
(74 %)
6 diff
(99.6 %id)
TI_1948231865   .d 386 to 1202 131 to 952       822/1472
(55 %)
6 diff
(99.6 %id)
TI_1948231866   .d 386 to 1335 116 to 1064       949/1224
(77 %)
6 diff
(99.6 %id)
CV022965 mixed .d 395 to 1021 1 to 626       626/630
(99 %)
7 diff
(98.9 %id)
EL734019 mixed .d 395 to 1051 1 to 657       657/657
(100 %)
5 diff
(99.3 %id)
EL736972 mixed .d 395 to 1029 1 to 635       635/635
(100 %)
0 diff
(100 %id)
BM466566 eye, retinoblastoma .d 491 to 966 1 to 481       481/1101
(43 %)
6 diff
(99.5 %id)
AW604555 colon .d 582 to 1188 1 to 608       608/608
(100 %)
10 diff
(98.4 %id)
AW754001 colon .d 582 to 1188 1 to 608       608/608
(100 %)
10 diff
(98.4 %id)
BI021012 marrow .d 592 to 1035 444 to 1       444/444
(100 %)
0 diff
(100 %id)
DA024533   .d 651 to 1219 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
CD511879 Pooled-Skin .d 679 to 1197 1 to 532       532/724
(73 %)
43 diff
(94.1 %id)
BI831474 brain, medulla .d 708 to 1514 1 to 808       808/818
(98 %)
13 diff
(98.5 %id)
TI_57172307   .d 708 to 1514 65 to 872       808/882
(91 %)
8 diff
(99.1 %id)
TI_1948231867   .d 753 to 1755 1156 to 137       1020/1403
(72 %)
78 diff
(94.5 %id)
TI_1948231116   .d 824 to 1755 1068 to 127       942/1330
(70 %)
36 diff
(97.3 %id)
BP203208 coronary artery .d 834 to 1417 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BF370600 prostate_normal .d 894 to 1224 338 to 8       331/338
(97 %)
0 diff
(100 %id)
BF670838 muscle (skeletal) .d 924 to 1663 1 to 741       741/857
(86 %)
21 diff
(97.6 %id)
TI_1948231613   .d 946 to 1755 946 to 129       818/1420
(57 %)
15 diff
(99.0 %id)
TI_1948231362   .d 996 to 1755 897 to 135       763/1404
(54 %)
38 diff
(97.3 %id)
BG742146 skin .d 1010 to 1707 1 to 695       695/695
(100 %)
5 diff
(99.3 %id)
AL701010 human skeletal muscle .d 1065 to 1744 1 to 680       680/680
(100 %)
1 diff
(99.9 %id)
AI743143 pooled .d 1092 to 1497 493 to 88       406/493
(82 %)
0 diff
(100 %id)
X85654   .d 1172 to 1413 1 to 239       239/301
(79 %)
6 diff
(98.1 %id)
BF929624 nervous_tumor .d 1253 to 1756 26 to 530       505/530
(95 %)
7 diff
(98.7 %id)
DB480026 hippocampus .d 1297 to 1528 1 to 233       233/244
(95 %)
2 diff
(99.2 %id)
BF435007 fibrotheoma, ovary .d 1558 to 2114 557 to 1       557/557
(100 %)
1 diff
(99.9 %id)
T06886   .d 1559 to 1784 225 to 1       225/225
(100 %)
1 diff
(99.6 %id)
CN423489 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 1574 to 2198 1 to 626       626/626
(100 %)
8 diff
(98.8 %id)
AI567251 ovary, tumor, 5 pooled (see description) .d 1580 to 2011 470 to 39       432/470
(91 %)
0 diff
(100 %id)
CD671410 eye, Iris .d 1669 to 2246 1 to 578   tiling clone,   578/578
(100 %)
1 diff
(99.9 %id)
BM718607 eye, fetal eye .d 1882 to 2145 1 to 264     Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base) 264/264
(100 %)
0 diff
(100 %id)
AA521091 germinal center B cell .d 1984 to 2532 559 to 11   AAA Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base) 549/556
(98 %)
39 diff
(93.0 %id)
BC040658 Brain, hypothalamus .d 2073 to 5582 1 to 3508   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 3508/3510
(99 %)
7 diff
(99.9 %id)
BG715076 brain, hypothalamus .d 2073 to 2763 1 to 690   available from MGC,   690/690
(100 %)
4 diff
(99.5 %id)
DB499103 hypothalamus .d 2080 to 2567 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
BG706707 brain, hypothalamus .d 2133 to 2863 1 to 756       756/756
(100 %)
51 diff
(93.3 %id)
DB483356 hippocampus .d 2138 to 2593 1 to 457       457/457
(100 %)
4 diff
(99.2 %id)
BI520712 brain, medulla .d 2138 to 2729 599 to 5       595/686
(86 %)
0 diff
(100 %id)
TI_43964080   .d 2138 to 2729 599 to 5       595/686
(86 %)
0 diff
(100 %id)
BM149464 leukopheresis .d 2138 to 2585 1 to 448       448/448
(100 %)
7 diff
(98.5 %id)
DB453568 testis .d 2139 to 2637 1 to 499       499/499
(100 %)
0 diff
(100 %id)
BC017675 Uterus, leiomyosarcoma .d 2147 to 2983 1 to 837   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base) 837/837
(100 %)
0 diff
(100 %id)
BQ646144 hepatocellular carcinoma, cell line, Liver .d 2150 to 2433 1 to 284       284/1086
(26 %)
2 diff
(99.9 %id)
BE889875 leiomyosarcoma, uterus .d 2156 to 2886 1 to 727   available from MGC,   727/783
(92 %)
10 diff
(98.8 %id)
BE788413 large cell carcinoma, lung .d 2168 to 2561 1 to 399       399/399
(100 %)
11 diff
(97.3 %id)
BU629177 cell lines, Chondrosarcoma .d 2172 to 2787 634 to 19   AAA Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base) 616/616
(100 %)
0 diff
(100 %id)
GD144921   .d 2187 to 2391 205 to 1     Submitted on the opposite strand 205/208
(98 %)
9 diff
(95.7 %id)
DB099383 testis .d 2294 to 2901 2 to 609   capped   608/608
(100 %)
0 diff
(100 %id)
AW300365 Kidney .d 2328 to 2779 454 to 3       452/454
(99 %)
0 diff
(100 %id)
DB518306 testis .d 2340 to 2781 1 to 442     Submitted on the opposite strand 442/444
(99 %)
1 diff
(99.8 %id)
AW183826.
matches multiple genes
pooled .d 2345 to 2531 189 to 3     also hits gene nawferby 187/189
(98 %)
0 diff
(100 %id)
DB521200 testis .d 2348 to 2781 1 to 433   tiling clone, Submitted on the opposite strand 433/433
(100 %)
1 diff
(99.8 %id)
BQ232975 embryonal carcinoma, cell line, testis .d 2353 to 2893 165 to 709       545/846
(64 %)
30 diff
(96.5 %id)
DB526029.
matches multiple genes
testis .d 2365 to 2781 1 to 416     Submitted on the opposite strand, also hits gene nawferby 416/416
(100 %)
1 diff
(99.8 %id)
AA512980 normal prostate, Prostate .d 2366 to 2781 420 to 5       416/420
(99 %)
0 diff
(100 %id)
AA636053.
matches multiple genes
normal prostate, Prostate .d 2393 to 2781 394 to 6   tiling clone, also hits gene nawferby 389/394
(98 %)
0 diff
(100 %id)
BQ130575.
matches multiple genes
insulinoma, Pancreas .d 2405 to 2986 596 to 15   AAA Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base), also hits gene nawferby 582/582
(100 %)
0 diff
(100 %id)
AW269232.
matches multiple genes
Kidney .d 2453 to 2780 328 to 1     also hits gene nawferby 328/328
(100 %)
1 diff
(99.7 %id)
BI089734 cervix .d 2464 to 3293 1 to 827       827/856
(96 %)
21 diff
(97.6 %id)
AI743498 pooled .d 2492 to 2987 498 to 3       496/498
(99 %)
0 diff
(100 %id)
AI928347 Kidney .d 2493 to 2987 498 to 4       495/498
(99 %)
0 diff
(100 %id)
AI431859 Kidney .d 2512 to 2986 475 to 1       475/475
(100 %)
0 diff
(100 %id)
AA723924 pooled .d 2515 to 2908 394 to 1       394/394
(100 %)
0 diff
(100 %id)
AK130071 lung .d 2520 to 5584 1 to 3066   tiling clone, available from FLJ,   3066/3066
(100 %)
2 diff
(100.0 %id)
AI167326 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 2562 to 2987 429 to 4       426/429
(99 %)
0 diff
(100 %id)
AI803582 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 2562 to 2988 428 to 1       428/428
(100 %)
3 diff
(99.3 %id)
AW243432 Kidney .d 2603 to 2986 398 to 15   AAA Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base) 384/384
(100 %)
6 diff
(98.5 %id)
EC510783.
matches multiple genes
Prostate .d 2647 to 2745 1 to 100     also hits gene nawferby 100/100
(100 %)
3 diff
(97.0 %id)
CN423488 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 2687 to 3347 19 to 679       661/680
(97 %)
2 diff
(99.8 %id)
CN423487 embryonic stem cells, cell lines H1, H7, andH9 .d 2718 to 2917 1 to 200       200/200
(100 %)
0 diff
(100 %id)
AK023933 thyroid gland .d 2824 to 5584 1 to 2761   available from FLJ,   2761/2761
(100 %)
2 diff
(100.0 %id)
AU141844 thyroid gland .d 2825 to 3586 2 to 763   capped   762/762
(100 %)
3 diff
(99.7 %id)
BQ431140 embryonal carcinoma, cell line, testis .d 2838 to 3624 1 to 791       791/922
(85 %)
23 diff
(97.6 %id)
BQ921075 leiomyosarcoma, uterus .d 2883 to 3780 1 to 906       906/906
(100 %)
17 diff
(98.2 %id)
AA263037   .d 3113 to 3528 1 to 420       420/420
(100 %)
10 diff
(97.7 %id)
BG178654 adenocarcinoma, cell line, Prostate .d 3113 to 3788 1 to 667       667/933
(71 %)
30 diff
(96.8 %id)
BU743048 eye, fetal eye .d 3183 to 3920 756 to 19   AAA Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base) 738/738
(100 %)
3 diff
(99.6 %id)
BQ064482 lymph, lymphoma, cell line .d 3340 to 4058 1 to 724       724/1047
(69 %)
17 diff
(98.4 %id)
DA881564   .d 3367 to 3934 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
BM461776 leiomyosarcoma, uterus .d 3439 to 4293 1 to 866       866/884
(97 %)
14 diff
(98.5 %id)
DB175649 kidney, tumor tissue .d 3490 to 4056 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
CA771430 Pancreas, Purified pancreatic islet .d 3509 to 4132 1 to 625       625/625
(100 %)
4 diff
(99.4 %id)
AW470113 adenocarcinoma, Pancreas .d 3519 to 3646 128 to 1       128/128
(100 %)
0 diff
(100 %id)
BX951958   .d 3535 to 4159 1 to 625       625/625
(100 %)
0 diff
(100 %id)
BM352906 Pancreas, Purified pancreatic islet .d 3549 to 4102 10 to 563       554/563
(98 %)
6 diff
(99.0 %id)
CK821903 Pancreas, Purified pancreatic islet .d 3579 to 4143 1 to 565     Submitted on the opposite strand 565/565
(100 %)
1 diff
(99.9 %id)
AK026770 Human lung .d 3604 to 5584 1 to 1980   available from FLJ, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 1980/1980
(100 %)
4 diff
(99.8 %id)
DA568760 whole embryo, mainly head .d 3631 to 4383 2 to 750   capped   749/818
(91 %)
8 diff
(99.1 %id)
DA075002 cerebellum .d 3647 to 4219 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BQ353442 head_neck .d 3665 to 3870 209 to 1       209/209
(100 %)
13 diff
(93.8 %id)
DA572247 whole embryo, mainly body .d 3690 to 4371 2 to 677   capped   676/720
(93 %)
14 diff
(98.1 %id)
BM475180 duodenal adenocarcinoma, cell line, small intestine .d 3798 to 4603 1 to 822   tiling clone,   822/993
(82 %)
26 diff
(97.4 %id)
AI916563 Kidney .d 3850 to 4321 504 to 33   AAA Possibly primed on the genome, locally A rich (22/26 A in genome downstream of last aligned base) 472/472
(100 %)
8 diff
(98.4 %id)
FN121040 breast carcinoma .d 3909 to 4019 1 to 113       113/117
(96 %)
7 diff
(94.1 %id)
AI245892 Kidney .d 3925 to 4359 435 to 1       435/435
(100 %)
0 diff
(100 %id)
AI094524 pooled .d 3933 to 4339 407 to 1       407/407
(100 %)
0 diff
(100 %id)
AI866261 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 3965 to 4339 375 to 1       375/375
(100 %)
0 diff
(100 %id)
BG434996 placenta .d 4001 to 4730 1 to 725       725/734
(98 %)
9 diff
(98.8 %id)
AA931090 Kidney .d 4007 to 4345 339 to 1       339/339
(100 %)
0 diff
(100 %id)
AA765505 germinal center B cell .d 4040 to 4276 237 to 1       237/237
(100 %)
0 diff
(100 %id)
F12344 brain, total brain .d 4158 to 4407 1 to 250       250/250
(100 %)
1 diff
(99.6 %id)
FN063562 breast carcinoma .d 4181 to 4297 1 to 113       113/113
(100 %)
5 diff
(95.6 %id)
T64823 whole brain .d 4187 to 4670 1 to 493       493/493
(100 %)
18 diff
(96.4 %id)
BG401876 Kidney .d 4201 to 4891 1 to 680       680/857
(79 %)
14 diff
(98.4 %id)
CB112711 Liver .d 4205 to 4701 1 to 497       497/520
(95 %)
2 diff
(99.7 %id)
N46546 multiple sclerosis lesions .d 4217 to 4511 1 to 296       296/298
(99 %)
3 diff
(99.0 %id)
AA352857   .d 4232 to 4511 1 to 280       280/280
(100 %)
0 diff
(100 %id)
FN055797 breast carcinoma .d 4242 to 4327 89 to 4     Submitted on the opposite strand 86/89
(96 %)
0 diff
(100 %id)
BG505696 embryonal carcinoma, testis .d 4254 to 4961 1 to 713       713/713
(100 %)
10 diff
(98.6 %id)
TI_149296156   .d 4270 to 5071 876 to 83   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 794/962
(82 %)
17 diff
(98.3 %id)
CB134640 Liver .d 4312 to 4651 340 to 1     Submitted on the opposite strand 340/370
(91 %)
0 diff
(100 %id)
BX645334   .d 4322 to 4816 1 to 493       493/493
(100 %)
1 diff
(99.8 %id)
BG613902 embryonal carcinoma, testis .d 4332 to 5158 1 to 825       825/826
(99 %)
23 diff
(97.3 %id)
AI961593 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 4347 to 4495 149 to 1       149/149
(100 %)
1 diff
(99.4 %id)
W39518 parathyroid gland, parathyroid tumor .d 4357 to 4714 1 to 360   fully sequenced,   360/360
(100 %)
4 diff
(98.9 %id)
BU684173 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 4375 to 5071 711 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 693/693
(100 %)
5 diff
(99.3 %id)
DB509551 testis .d 4443 to 4712 1 to 268     Submitted on the opposite strand 268/268
(100 %)
12 diff
(95.6 %id)
AI927695 Kidney .d 4488 to 5071 598 to 15   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 584/584
(100 %)
5 diff
(99.2 %id)
AW749080 breast .d 4510 to 5047 1 to 533       533/534
(99 %)
17 diff
(96.9 %id)
R70604 placenta .d 4519 to 4871 1 to 357       357/425
(84 %)
8 diff
(98.2 %id)
AW190438 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 4540 to 5072 535 to 1       535/535
(100 %)
3 diff
(99.5 %id)
AA286951 germinal center B cell .d 4600 to 5050 1 to 451       451/451
(100 %)
0 diff
(100 %id)
BF675566 Prostate .d 4646 to 5364 1 to 712       712/865
(82 %)
28 diff
(96.8 %id)
AI564695 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 4667 to 5071 405 to 1       405/405
(100 %)
2 diff
(99.6 %id)
DB509761 testis .d 4672 to 5071 1 to 400     Submitted on the opposite strand 400/400
(100 %)
1 diff
(99.8 %id)
AW082371 pooled .d 4677 to 5073 398 to 2       397/398
(99 %)
0 diff
(100 %id)
W15225 parathyroid gland, parathyroid tumor .d 4684 to 5048 367 to 1   fully sequenced,   367/367
(100 %)
1 diff
(99.8 %id)
CK821904 Pancreas, Purified pancreatic islet .d 4700 to 5286 597 to 11   AAA Submitted on the opposite strand 587/587
(100 %)
0 diff
(100 %id)
BG565590 Liver .d 4730 to 5251 1 to 522       522/522
(100 %)
0 diff
(100 %id)
BM352602 Pancreas, Purified pancreatic islet .d 4741 to 5286 546 to 1       546/546
(100 %)
0 diff
(100 %id)
AW953605   .d 4760 to 4860 529 to 630       601/630
(95 %)
11 diff
(98.3 %id)
T16371   .d 4774 to 5071 298 to 1       298/298
(100 %)
0 diff
(100 %id)
CA947045 Pancreas, Purified pancreatic islet .d 4907 to 5412 1 to 505   fully sequenced,   505/505
(100 %)
0 diff
(100 %id)
AI253218 Kidney .d 4915 to 5286 394 to 23   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 372/372
(100 %)
1 diff
(99.8 %id)
BM457397 embryonal carcinoma, cell line, testis .d 4916 to 5532 66 to 686       621/1179
(52 %)
17 diff
(98.6 %id)
AL700202 human skeletal muscle .d 4933 to 5612 1 to 681       681/722
(94 %)
6 diff
(99.2 %id)
AW977841   .d 4948 to 5584 636 to 1     Submitted on the opposite strand 636/636
(100 %)
16 diff
(97.5 %id)
AW978664   .d 4958 to 5583 629 to 1     Submitted on the opposite strand 629/629
(100 %)
17 diff
(97.3 %id)
AW020729 cochlea, ear .d 4963 to 5439 1 to 481       481/481
(100 %)
12 diff
(97.6 %id)
BM456778 embryonal carcinoma, cell line, testis .d 4976 to 5814 1 to 848       848/1048
(80 %)
38 diff
(96.4 %id)
AU144305 whole embryo, mainly head .d 5004 to 5584 581 to 1       581/584
(99 %)
15 diff
(97.5 %id)
CA771123 Pancreas, Purified pancreatic islet .d 5024 to 5590 567 to 1       567/567
(100 %)
4 diff
(99.3 %id)
AU159302 thyroid gland .d 5037 to 5584 547 to 1       547/547
(100 %)
11 diff
(98.0 %id)
AU146552 whole embryo, mainly body .d 5062 to 5584 518 to 1       518/522
(99 %)
10 diff
(98.1 %id)
DA127473 cerebellum .d 5066 to 5647 2 to 585   capped   584/584
(100 %)
4 diff
(99.4 %id)
DB570207 hypothalamus .d 5068 to 5582 1 to 515     Submitted on the opposite strand 515/517
(99 %)
1 diff
(99.9 %id)
AI807684 pooled .d 5072 to 5584 513 to 1       513/513
(100 %)
0 diff
(100 %id)
AW118079 pooled .d 5073 to 5584 512 to 1       512/512
(100 %)
0 diff
(100 %id)
BX089702 whole brain .d 5095 to 5598 504 to 1       504/506
(99 %)
3 diff
(99.5 %id)
AA875999 germinal center B cell .d 5098 to 5589 492 to 1       492/492
(100 %)
1 diff
(99.8 %id)
FN076710 breast carcinoma .d 5124 to 5180 57 to 1     Submitted on the opposite strand 57/58
(98 %)
0 diff
(100 %id)
DB552270 hippocampus .d 5125 to 5584 1 to 460     Submitted on the opposite strand 460/460
(100 %)
2 diff
(99.6 %id)
AW516283 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 5134 to 5592 459 to 1       459/459
(100 %)
1 diff
(99.8 %id)
DB548756 hippocampus .d 5143 to 5587 1 to 445     Submitted on the opposite strand 445/446
(99 %)
2 diff
(99.6 %id)
AI459631 colon .d 5168 to 5583 417 to 2       416/417
(99 %)
0 diff
(100 %id)
BM153528 leukopheresis .d 5182 to 5584 419 to 17   AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 403/404
(99 %)
15 diff
(96.3 %id)
AA814979 germinal center B cell .d 5198 to 5584 398 to 11       388/398
(97 %)
0 diff
(100 %id)
BM144863 leukopheresis .d 5215 to 5584 385 to 16   AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 370/370
(100 %)
0 diff
(100 %id)
AL701111 human skeletal muscle .d 5231 to 5610 1 to 380       380/380
(100 %)
2 diff
(99.5 %id)
N39136 multiple sclerosis lesions .d 5260 to 5584 330 to 1       330/425
(77 %)
7 diff
(98.4 %id)
AV744804 cord Blood .d 5261 to 5584 180 to 501   AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 471/501
(94 %)
19 diff
(96.3 %id)
BM454354 lymph, lymphoma, cell line .d 5272 to 6132 1 to 872   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 872/872
(100 %)
49 diff
(94.4 %id)
DA227180 brain .d 5291 to 5584 2 to 295   capped, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 294/294
(100 %)
0 diff
(100 %id)
T72572 whole brain .d 5293 to 5538 246 to 1       246/246
(100 %)
1 diff
(99.6 %id)
BM194399 leukopheresis .d 5302 to 5600 299 to 1       299/299
(100 %)
12 diff
(96.0 %id)
AW452503   .d 5351 to 5601 251 to 1       251/251
(100 %)
12 diff
(95.3 %id)
AV739793 cord Blood .d 5368 to 5583 23 to 238   AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 216/241
(89 %)
2 diff
(99.2 %id)
F09964 brain, total brain .d 5376 to 5584 209 to 1       209/209
(100 %)
2 diff
(99.1 %id)
CA946772 Pancreas, Purified pancreatic islet .d 5382 to 5590 208 to 1   fully sequenced,   208/208
(100 %)
1 diff
(99.6 %id)
BE245630 leukopheresis .d 5430 to 5665 1 to 237       237/237
(100 %)
14 diff
(94.1 %id)
AA748300 germinal center B cell .d 5438 to 5610 1 to 173   tiling clone, Submitted on the opposite strand 173/173
(100 %)
2 diff
(98.9 %id)
AA806243 germinal center B cell .d 5438 to 5737 1 to 301     Submitted on the opposite strand 301/301
(100 %)
1 diff
(99.7 %id)
AA286906 germinal center B cell .d 5459 to 5584 126 to 1       126/126
(100 %)
0 diff
(100 %id)
TI_154158243   .d 5527 to 6074 86 to 634       549/549
(100 %)
0 diff
(100 %id)
DB019750 testis .d 5566 to 6112 2 to 550   tiling clone, capped   549/549
(100 %)
1 diff
(99.9 %id)
AL119846 amygdala .d 5615 to 6107 1 to 493       493/493
(100 %)
0 diff
(100 %id)
BF735051 amnion_normal .d 5686 to 6119 16 to 447       432/447
(96 %)
6 diff
(98.7 %id)
DB145436 thymus .d 5694 to 6218 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
BP425634 small intestine .d 5700 to 5929 1 to 230     Submitted on the opposite strand 230/230
(100 %)
0 diff
(100 %id)
DB238801 trachea .d 5828 to 6403 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB228617 trachea .d 5829 to 6397 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
H86428 eye, retina .d 5846 to 6117 1 to 273       273/273
(100 %)
1 diff
(99.7 %id)
DA185459 amygdala .d 5876 to 6437 2 to 565   tiling clone, capped   564/564
(100 %)
3 diff
(99.5 %id)
DB161280 thymus .d 5879 to 6467 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DA123282 cerebellum .d 6117 to 6643 2 to 528   capped   527/527
(100 %)
2 diff
(99.7 %id)
DA127973 cerebellum .d 6208 to 6725 2 to 519   capped   518/518
(100 %)
2 diff
(99.7 %id)
DB229744 trachea .d 6227 to 6819 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
BG986272 head_neck .d 6231 to 6814 583 to 1       583/583
(100 %)
26 diff
(95.6 %id)
DB088675 testis .d 6233 to 6798 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA382219 thalamus .d 6235 to 6794 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA192005 amygdala .d 6247 to 6827 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
DB100684 testis .d 6248 to 6815 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
DA307248 hippocampus .d 6254 to 6724 2 to 472   capped   471/471
(100 %)
2 diff
(99.6 %id)
DA476978   .d 6257 to 6824 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DB132925 thymus .d 6271 to 6834 2 to 565   capped   564/564
(100 %)
5 diff
(99.2 %id)
BQ897976 dorsal root ganglia .d 6293 to 7126 1 to 841       841/956
(87 %)
28 diff
(97.1 %id)
DA274539 corpus callosum .d 6305 to 6868 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
BU597295 mixed (pool of 40 RNAs) .d 6311 to 7121 1 to 814       814/815
(99 %)
12 diff
(98.6 %id)
CX865939 embryonic stem .d 6376 to 7054 1 to 679       679/679
(100 %)
4 diff
(99.5 %id)
DB074909 testis .d 6434 to 6983 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
BE882301 leiomyosarcoma, uterus .d 6445 to 7187 1 to 750       750/760
(98 %)
68 diff
(91.1 %id)
DA041223 bladder .d 6467 to 6989 2 to 525   capped   524/524
(100 %)
2 diff
(99.7 %id)
CK430562 eye, lacrimal gland .d 6500 to 7126 1 to 627       627/627
(100 %)
1 diff
(99.9 %id)
BP872518 embryonal kidney .d 6511 to 6965 1 to 455       455/458
(99 %)
6 diff
(98.7 %id)
AL712333 human skeletal muscle .d 6544 to 7105 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DB165125 thymus .d 6574 to 7168 2 to 597   tiling clone, capped   596/596
(100 %)
2 diff
(99.7 %id)
BX646949 Liver .d 6673 to 7396 1 to 724       724/724
(100 %)
4 diff
(99.5 %id)
F12176 brain, total brain .d 6782 to 7102 1 to 321       321/321
(100 %)
2 diff
(99.4 %id)
R26635 whole brain .d 6783 to 7112 1 to 334       334/337
(99 %)
10 diff
(97.1 %id)
H86088 eye, retina .d 6783 to 7083 304 to 1       304/304
(100 %)
3 diff
(99.1 %id)
T66059 whole brain .d 6805 to 7374 1 to 584       584/588
(99 %)
36 diff
(93.9 %id)
EH350105   .d 6916 to 6990 1 to 76       76/76
(100 %)
1 diff
(98.7 %id)
DA829659 placenta .d 6955 to 7855 2 to 912   capped   911/950
(95 %)
29 diff
(97.0 %id)
AK096676   .d 7021 to 9335 1 to 2315   tiling clone, available from FLJ,   2315/2315
(100 %)
2 diff
(100.0 %id)
DA816231   .d 7022 to 7589 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
BF826983 head_normal .d 7075 to 7357 292 to 12     Submitted on the opposite strand 281/318
(88 %)
0 diff
(100 %id)
DA368108 subthalamic nucleus .d 7116 to 7689 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AA279373.
matches multiple genes
germinal center B cell .d 7136 to 7521 1 to 385     also hits gene veemee 385/385
(100 %)
1 diff
(99.8 %id)
BM721219 eye, fetal eye .d 7149 to 7803 1 to 656       656/656
(100 %)
1 diff
(99.9 %id)
BQ221653 melanotic melanoma, skin .d 7158 to 7995 1 to 851   tiling clone,   851/922
(92 %)
19 diff
(98.0 %id)
CD642602 Embryonic Stem cells .d 7169 to 7938 9 to 771       763/842
(90 %)
18 diff
(97.9 %id)
AA092548   .d 7216 to 7462 1 to 241       241/270
(89 %)
9 diff
(96.7 %id)
BU838524 dorsal root ganglia .d 7223 to 8141 1 to 925       925/943
(98 %)
12 diff
(98.8 %id)
DA831538 placenta .d 7284 to 8105 2 to 825   capped   824/824
(100 %)
16 diff
(98.1 %id)
BU178474 eye, retinoblastoma .d 7340 to 8142 1 to 814       814/949
(85 %)
32 diff
(96.7 %id)
DA572129 whole embryo, mainly body .d 7344 to 7963 2 to 620   capped   619/619
(100 %)
3 diff
(99.6 %id)
H53337 liver and spleen .d 7374 to 7758 1 to 388       388/388
(100 %)
3 diff
(99.3 %id)
BE772058 prostate_tumor .d 7393 to 7740 1 to 346       346/346
(100 %)
5 diff
(98.6 %id)
BX490540   .d 7405 to 7970 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
CR615509 thymus .d 7461 to 9312 1 to 1852       1852/1852
(100 %)
0 diff
(100 %id)
BX415876 thymus .d 7461 to 8389 1 to 915   fully sequenced,   915/915
(100 %)
4 diff
(99.6 %id)
BF793763 adrenal cortex carcinoma, cell line, adrenal gland .d 7531 to 8274 1 to 733       733/766
(95 %)
19 diff
(97.6 %id)
DA570762 whole embryo, mainly head .d 7533 to 8376 2 to 842   capped   841/845
(99 %)
8 diff
(99.1 %id)
DA136279 alzheimer cortex .d 7574 to 8206 2 to 634   capped   633/633
(100 %)
0 diff
(100 %id)
DA828821 placenta .d 7576 to 8277 2 to 721   capped   720/750
(96 %)
21 diff
(97.2 %id)
BX504553   .d 7584 to 8172 1 to 589       589/593
(99 %)
1 diff
(99.9 %id)
BE867010 adenocarcinoma, colon .d 7591 to 8384 8 to 788       781/788
(99 %)
6 diff
(99.3 %id)
R35312 whole brain .d 7595 to 7936 1 to 346       346/396
(87 %)
6 diff
(98.5 %id)
R22749 whole brain .d 7608 to 7987 1 to 384       384/395
(97 %)
5 diff
(98.8 %id)
BI915735 brain .d 7619 to 8269 1 to 658       658/795
(82 %)
17 diff
(97.9 %id)
BM805170 ovary (pool of 3) .d 7626 to 8499 12 to 890       879/1032
(85 %)
6 diff
(99.5 %id)
H24248 whole brain .d 7651 to 8020 1 to 370       370/370
(100 %)
0 diff
(100 %id)
BX457431 thymus .d 8359 to 9312 947 to 1   fully sequenced,   947/947
(100 %)
3 diff
(99.7 %id)
BM679634 eye, fetal eye .d 8556 to 9335 796 to 19   AAA   778/778
(100 %)
11 diff
(98.6 %id)
DB377245 placenta .d 8726 to 9338 607 to 1   tiling clone,   607/607
(100 %)
21 diff
(96.6 %id)
DB357561 whole embryo, mainly head .d 8757 to 9335 573 to 1       573/579
(98 %)
20 diff
(96.6 %id)
DB327678   .d 8759 to 9335 577 to 1       577/577
(100 %)
1 diff
(99.9 %id)
DB359094 whole embryo, mainly body .d 8781 to 9335 550 to 1       550/551
(99 %)
20 diff
(96.4 %id)
DB301177 alzheimer cortex .d 8797 to 9338 544 to 1       544/544
(100 %)
2 diff
(99.7 %id)
DB373426 placenta .d 8891 to 9335 443 to 2       442/463
(95 %)
0 diff
(100 %id)
DB374558 placenta .d 8893 to 9335 444 to 2       443/444
(99 %)
0 diff
(100 %id)
H53338 liver and spleen .d 9072 to 9322 251 to 1       251/254
(98 %)
0 diff
(100 %id)
R51227 whole brain .d 9145 to 9335 219 to 29   AAA   191/191
(100 %)
0 diff
(100 %id)
AF161548 blood .e 1 to 2209 1 to 2208 V47W V48L A50G A51S C52L ... tiling clone,   2208/2210
(99 %)
24 diff
(99.0 %id)
AF150253 umbilical cord blood .e 1 to 2209 1 to 2208 V47W V48L A50G A51S C52L ...     2208/2210
(99 %)
24 diff
(99.0 %id)
AW856148 colon .e 1714 to 1999 286 to 1       286/289
(98 %)
8 diff
(97.3 %id)
AW856191 colon .e 1714 to 1996 289 to 6       284/292
(97 %)
0 diff
(100 %id)
AK024659   .f 1 to 2611 1 to 2611 D217G tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 2611/2611
(100 %)
2 diff
(100.0 %id)
DR158405 human embryonic stem cells differentiated toan early endodermal cell type .g 1 to 725 1 to 730   tiling clone,   730/730
(100 %)
6 diff
(99.2 %id)
TI_57217091   .g 543 to 1301 34 to 789   tiling clone,   756/789
(95 %)
14 diff
(98.3 %id)
BI755353 brain .g 550 to 1301 1 to 749   tiling clone,   749/749
(100 %)
4 diff
(99.5 %id)
BU431422 lymph .g 589 to 1152 1 to 563       563/563
(100 %)
8 diff
(98.6 %id)
TI_154153307   .g 596 to 1206 80 to 689       610/611
(99 %)
5 diff
(99.2 %id)
DA759956   .h 1 to 548 2 to 549 exact tiling clone, capped   548/548
(100 %)
1 diff
(99.9 %id)
AW380063 head_neck .h 163 to 436 274 to 3       272/281
(96 %)
2 diff
(99.3 %id)
AW380078 head_neck .h 163 to 428 267 to 3       265/274
(96 %)
2 diff
(99.3 %id)
BX118320   .i 1 to 617 8 to 624 Q2S tiling clone,   617/624
(98 %)
6 diff
(99.1 %id)
AA993602   .i 214 to 695 483 to 3   tiling clone,   481/486
(98 %)
0 diff
(100 %id)
AA993393   .j 1 to 477 477 to 1 G25V tiling clone,   477/477
(100 %)
2 diff
(99.6 %id)
AW057834 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .k 1 to 450 456 to 7 exact tiling clone,   450/456
(98 %)
0 diff
(100 %id)
AV681886 hepatocellular carcinoma Gene ZBTB44, variant not shown         Suspected internal deletion, this clone was ignored    
AV707411 adrenal gland Gene ZBTB44, variant not shown         Suspected internal deletion, this clone was ignored    
GD153903   Gene ZBTB44, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DA669155 esophagus Gene ZBTB44, variant not shown       capped This clone was ignored    
BF576963 muscle (skeletal) Gene ZBTB44, variant not shown         Suspected internal deletion, this clone was ignored    
DB326801 brain Gene ZBTB44, variant not shown         This clone was ignored    
DA798059 brain Gene ZBTB44, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI