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Gene HSPA1LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
100 supporting clones for gene HSPA1L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC303769 cerebellum .a 1 to 349 1 to 349   tiling clone,   349/349
(100 %)
1 diff
(99.8 %id)
AK295416 corpus callosum .a 44 to 2548 1 to 2505 T557M E666K tiling clone,   2505/2505
(100 %)
2 diff
(100.0 %id)
DC329122 corpus callosum .a 44 to 604 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC356167   .a 68 to 612 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DN997809 breast cancer, Mammary gland (cancer tissue) .a 115 to 754 1 to 641       641/641
(100 %)
5 diff
(99.3 %id)
DC329775 corpus callosum .a 154 to 720 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DC353512 brain .a 154 to 426 1 to 273       273/273
(100 %)
0 diff
(100 %id)
DC397737 testis .a 269 to 848 1 to 585       585/585
(100 %)
6 diff
(99.0 %id)
BG717447 testis .a 271 to 1025 7 to 762       756/764
(98 %)
10 diff
(98.7 %id)
NM_005527.3   .a 278 to 2813 1 to 2536   RefSeq, AAA   2536/2536
(100 %)
0 diff
(100 %id)
DC397952 testis .a 286 to 839 1 to 557       557/557
(100 %)
4 diff
(99.3 %id)
DC395731 testis .a 287 to 841 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DB448932 testis .a 288 to 710 1 to 423       423/423
(100 %)
2 diff
(99.6 %id)
DB451408 testis .a 288 to 783 1 to 496       496/496
(100 %)
2 diff
(99.6 %id)
DB467223 hippocampus .a 288 to 738 1 to 455       455/458
(99 %)
15 diff
(96.8 %id)
DC397578 testis .a 289 to 847 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DC397677 testis .a 289 to 657 1 to 371       371/371
(100 %)
5 diff
(98.7 %id)
DC395838 testis .a 292 to 887 1 to 597       597/597
(100 %)
1 diff
(99.9 %id)
DC394747 testis .a 295 to 849 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC396036 testis .a 295 to 893 1 to 599       599/599
(100 %)
0 diff
(100 %id)
DC400279 testis .a 295 to 831 1 to 537       537/537
(100 %)
0 diff
(100 %id)
BG724393 testis .a 300 to 956 1 to 657       657/658
(99 %)
12 diff
(98.2 %id)
DC395392 testis .a 300 to 910 1 to 612       612/612
(100 %)
1 diff
(99.9 %id)
BC034483 testis .a 301 to 2692 1 to 2392   available from MGC, AAA   2392/2392
(100 %)
9 diff
(99.7 %id)
BG721966 testis .a 302 to 980 1 to 678       678/678
(100 %)
3 diff
(99.6 %id)
DC398279 testis .a 309 to 867 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
DB024549 testis .a 310 to 564 2 to 256   capped   255/255
(100 %)
2 diff
(99.3 %id)
DB041826 testis .a 310 to 866 2 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DB028508 testis .a 311 to 887 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB037904 testis .a 311 to 863 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB054275 testis .a 311 to 869 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB026562 testis .a 312 to 866 2 to 558   capped   557/557
(100 %)
5 diff
(99.2 %id)
DB039934 testis .a 316 to 900 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
D85730 testis .a 326 to 2696 1 to 2371   tiling clone,   2371/2371
(100 %)
4 diff
(99.9 %id)
DB046492 testis .a 363 to 937 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BG179570 adenocarcinoma, cell line, Prostate .a 924 to 1607 1 to 683       683/683
(100 %)
9 diff
(98.7 %id)
DB036257 testis .a 928 to 1449 2 to 527   capped   526/526
(100 %)
6 diff
(98.9 %id)
R25035 whole brain .a 1113 to 1516 1 to 417       417/428
(97 %)
19 diff
(95.6 %id)
H17836 whole brain .a 1275 to 1384 16 to 125       110/125
(88 %)
4 diff
(96.8 %id)
TI_1948147488   .a 1368 to 2385 1138 to 132       1007/1335
(75 %)
0 diff
(100 %id)
TI_1948147487   .a 1417 to 2385 1091 to 125       967/1266
(76 %)
0 diff
(100 %id)
TI_1948155298   .a 1709 to 2381 799 to 126       674/1419
(47 %)
0 diff
(100 %id)
TI_151798070   .a 1711 to 2271 108 to 672   tiling clone,   565/799
(70 %)
24 diff
(97.0 %id)
DB514725 testis .a 1767 to 2176 1 to 408     Submitted on the opposite strand 408/413
(98 %)
6 diff
(98.6 %id)
TI_1948155453   .a 1835 to 2385 684 to 133       552/1334
(41 %)
0 diff
(100 %id)
AI147981   .a 1856 to 2191 335 to 1       335/335
(100 %)
19 diff
(94.4 %id)
BM670632 eye, fetal eyes .a 2020 to 2696 692 to 15   AAA   678/678
(100 %)
3 diff
(99.6 %id)
AI199231 anaplastic oligodendroglioma, brain .a 2045 to 2700 657 to 2       656/657
(99 %)
0 diff
(100 %id)
AA234741 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2069 to 2386 1 to 318       318/318
(100 %)
8 diff
(97.5 %id)
AI656913 pooled germ cell tumors .a 2092 to 2700 610 to 2       609/610
(99 %)
0 diff
(100 %id)
AI677706 pooled .a 2107 to 2814 711 to 4   tiling clone,   708/711
(99 %)
0 diff
(100 %id)
AW592622 pooled .a 2128 to 2700 572 to 2       571/572
(99 %)
0 diff
(100 %id)
CB853711 Human Lung Epithelial cells, lung .a 2141 to 2696 576 to 19   AAA   558/561
(99 %)
5 diff
(99.2 %id)
AA813078   .a 2184 to 2703 523 to 5       519/523
(99 %)
0 diff
(100 %id)
AI149825   .a 2197 to 2703 509 to 3       507/509
(99 %)
0 diff
(100 %id)
AI376791 pooled .a 2200 to 2703 506 to 3       504/506
(99 %)
0 diff
(100 %id)
AI955159 brain, four pooled pituitary adenomas .a 2221 to 2813 591 to 1   tiling clone,   591/591
(100 %)
5 diff
(99.2 %id)
DB516884 testis .a 2234 to 2696 1 to 462     Submitted on the opposite strand 462/462
(100 %)
2 diff
(99.6 %id)
TI_154033090   .a 2249 to 2808 644 to 85   AAA   560/989
(56 %)
1 diff
(99.9 %id)
CA443193 lung, Metastatic Chondrosarcoma .a 2249 to 2808 578 to 19   AAA   560/569
(98 %)
1 diff
(99.9 %id)
CA443330 lung, Metastatic Chondrosarcoma .a 2249 to 2808 578 to 19   AAA   560/569
(98 %)
1 diff
(99.9 %id)
AA778073 heart .a 2256 to 2703 445 to 1       445/445
(100 %)
6 diff
(98.7 %id)
BQ185905 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2279 to 2696 1 to 418   AAA   418/418
(100 %)
0 diff
(100 %id)
AA622726 lung, lung tumor .a 2280 to 2813 532 to 1       532/532
(100 %)
2 diff
(99.7 %id)
AA860359   .a 2303 to 2699 396 to 1       396/404
(98 %)
6 diff
(98.6 %id)
AI800698 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2326 to 2703 382 to 5       378/382
(98 %)
0 diff
(100 %id)
BG056007 anaplastic oligodendroglioma, brain .a 2368 to 2696 345 to 17   AAA   329/329
(100 %)
8 diff
(97.6 %id)
AI222197 pooled .a 2372 to 2699 328 to 1       328/328
(100 %)
3 diff
(99.1 %id)
BF511809   .a 2380 to 2696 329 to 14   AAA   316/323
(97 %)
2 diff
(99.4 %id)
H17513 whole brain .a 2390 to 2820 438 to 3       436/448
(97 %)
0 diff
(100 %id)
BX115051 whole brain .a 2398 to 2813 430 to 15   AAA   416/416
(100 %)
2 diff
(99.6 %id)
AI693234 carcinoid, lung .a 2416 to 2692 287 to 12   AAA   276/276
(100 %)
4 diff
(98.6 %id)
R43793 whole brain .a 2493 to 2820 344 to 3       342/348
(98 %)
0 diff
(100 %id)
AK223386 stomach mucosa .b 1 to 2389 1 to 2389 T545M E654K tiling clone, AAA   2389/2389
(100 %)
2 diff
(100.0 %id)
AK315227 Spleen .b 65 to 2083 1 to 2019   tiling clone,   2019/2019
(100 %)
1 diff
(100.0 %id)
DC390192 Spleen .b 65 to 618 1 to 554       554/554
(100 %)
0 diff
(100 %id)
CD251867 testis .b 142 to 934 34 to 832       799/878
(91 %)
8 diff
(99.1 %id)
TI_1948147485   .b 157 to 891 123 to 857       735/1222
(60 %)
9 diff
(99.3 %id)
TI_1948147486   .b 157 to 961 127 to 931       805/1289
(62 %)
23 diff
(98.3 %id)
TI_1948155011   .b 157 to 1036 128 to 1011       884/1275
(69 %)
48 diff
(96.3 %id)
TI_1948155148   .b 157 to 815 134 to 793       660/1341
(49 %)
42 diff
(96.9 %id)
CV022972 mixed .b 158 to 823 1 to 664       664/664
(100 %)
2 diff
(99.7 %id)
DB044442 testis .b 245 to 790 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
CD244454 testis .b 359 to 1195 37 to 881       845/884
(95 %)
15 diff
(98.4 %id)
DB058873 testis .b 450 to 986 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
TI_1948155012   .b 1285 to 2082 895 to 94       802/1272
(63 %)
0 diff
(100 %id)
CX760345 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c-u 1 to 722 717 to 1 E7S D10S H11T T12R R13I ... tiling clone,   717/761
(94 %)
7 diff
(99.1 %id)
BP420014 small intestine .c-u 115 to 696 582 to 1       582/582
(100 %)
4 diff
(99.4 %id)
BQ314563.
matches multiple genes
denis_drash .c-u 121 to 449 13 to 341   tiling clone, also hits gene LOC100287365 329/341
(96 %)
6 diff
(98.3 %id)
CD620349   .c-u 124 to 712 1 to 590   tiling clone,   590/593
(99 %)
7 diff
(98.9 %id)
CD620335   .c-u 143 to 721 1 to 579       579/579
(100 %)
5 diff
(99.2 %id)
BP425488 small intestine .c-u 181 to 685 505 to 1       505/505
(100 %)
3 diff
(99.5 %id)
DC358750 lung .d 1 to 556 556 to 1 G23R L29V N65D tiling clone, Submitted on the opposite strand 556/556
(100 %)
4 diff
(99.3 %id)
DC359096 lung .d 262 to 556 295 to 1   tiling clone, Submitted on the opposite strand 295/295
(100 %)
1 diff
(99.7 %id)
CD620318   .d 316 to 544 1 to 231   tiling clone,   231/239
(96 %)
5 diff
(98.0 %id)
DC420843 uterus .e 1 to 433 1 to 433 L86X A94T Q101H tiling clone,   433/433
(100 %)
2 diff
(99.6 %id)
DC421985 uterus .e 19 to 583 1 to 566       566/566
(100 %)
2 diff
(99.7 %id)
DC305369 cerebellum .e 68 to 595 1 to 528   tiling clone,   528/528
(100 %)
2 diff
(99.7 %id)
DC398718 testis .f 1 to 582 1 to 583 A4C K5Q I7N A8R I9H ... tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
DA632730 Kidney .g 1 to 576 2 to 579 G26W K27Q V28G E29G I30D ... tiling clone, capped   578/578
(100 %)
3 diff
(99.5 %id)
DC299726   .h 1 to 566 10 to 575 exact tiling clone,   566/566
(100 %)
0 diff
(100 %id)
AA382047   .i-u 1 to 235 1 to 235 L15X E30X I45X N47X tiling clone,   235/235
(100 %)
0 diff
(100 %id)
AK302179 testis Gene HSPA1L, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI