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Gene HRH3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
32 supporting clones for gene HRH3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB045369   .a 1 to 1808 243 to 2050 exact tiling clone,   1808/2050
(88 %)
6 diff
(99.8 %id)
AB019000 hypothalamus and hippocampus .a 29 to 1390 1 to 1362 exact     1362/1362
(100 %)
0 diff
(100 %id)
NM_007232.2   .b 1 to 2680 1 to 2680 exact RefSeq,   2680/2680
(100 %)
0 diff
(100 %id)
AF140538   .b 12 to 2670 12 to 2672 E19D tiling clone, AAA   2661/2672
(99 %)
8 diff
(99.8 %id)
BC096840 G-protein coupled receptors obtained byPCR-directed strategy .b 291 to 1637 10 to 1356 exact tiling clone,   1347/1356
(99 %)
7 diff
(99.5 %id)
CF147822 mixed .b 291 to 1011 10 to 728       719/732
(98 %)
17 diff
(97.7 %id)
AF321910 hippocampus .b 298 to 1635 1 to 1338 E19D     1338/1338
(100 %)
2 diff
(99.9 %id)
DA308555 hippocampus .b 382 to 938 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA306992 hippocampus .b 491 to 1062 2 to 573   capped   572/573
(99 %)
2 diff
(99.7 %id)
BE063702 breast .b 752 to 961 232 to 25     Submitted on the opposite strand 208/236
(88 %)
0 diff
(100 %id)
DA175139 amygdala .b 798 to 1348 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA083747 cerebellum .b 857 to 1381 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
BE783826 eye, retinoblastoma .b 1176 to 1759 1 to 571       571/910
(62 %)
18 diff
(98.1 %id)
BM548665 brain, hippocampus .b 1246 to 2110 13 to 895       883/1103
(80 %)
6 diff
(99.5 %id)
BQ068856 brain, neuroblastoma, cell line .b 1302 to 2172 1 to 888       888/946
(93 %)
23 diff
(97.6 %id)
CB154982 brain .b 1415 to 1947 1 to 533       533/533
(100 %)
0 diff
(100 %id)
R87217 brain .b 1529 to 1928 1 to 401       401/401
(100 %)
14 diff
(96.6 %id)
BX089742 brain .b 1530 to 2340 1 to 811   tiling clone,   811/813
(99 %)
5 diff
(99.4 %id)
H30846 brain .b 1530 to 1937 1 to 408       408/412
(99 %)
10 diff
(97.6 %id)
CN335777 embryonic stem cells, cell lines H1, H7, andH9 .b 1592 to 2057 1 to 466       466/466
(100 %)
0 diff
(100 %id)
BF531112 anaplastic oligodendroglioma with 1p/19qloss, brain .b 2120 to 2530 1 to 409   tiling clone,   409/409
(100 %)
2 diff
(99.6 %id)
H28163 brain .b 2406 to 2662 260 to 9       252/260
(96 %)
0 diff
(100 %id)
R87218 brain .b 2408 to 2651 240 to 1       240/240
(100 %)
8 diff
(96.7 %id)
AF321911 hippocampus .c 1 to 1098 1 to 1098       1098/1098
(100 %)
2 diff
(99.9 %id)
AF321913 hippocampus .c 1 to 1122 1 to 1122 E19D tiling clone,   1122/1122
(100 %)
2 diff
(99.9 %id)
AF363791   .c 1 to 1098 1 to 1098   tiling clone,   1098/1098
(100 %)
1 diff
(100.0 %id)
AF321912 hippocampus .d 1 to 906 1 to 906       906/906
(100 %)
2 diff
(99.8 %id)
AF346904 hippocampus .d 1 to 930 1 to 930 E19D tiling clone,   930/930
(100 %)
2 diff
(99.8 %id)
CN423054 embryonic stem cells, cell lines H1, H7, andH9 .e 1 to 705 12 to 716 G2V T3R tiling clone,   705/716
(98 %)
6 diff
(99.2 %id)
DA360011 subthalamic nucleus .e 62 to 632 2 to 575   capped   574/574
(100 %)
5 diff
(99.2 %id)
DA257272 caudate nucleus .e 63 to 630 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
AK074730   .f 1 to 1901 2 to 1902 exact tiling clone, available from FLJ,   1902/1902
(100 %)
2 diff
(99.9 %id)
DA728518   .f 1 to 735 2 to 737   capped   736/754
(97 %)
6 diff
(99.3 %id)
AF346903 hippocampus Gene HRH3, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC