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Gene AGFG2andIRS3LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
122 supporting clones for gene AGFG2andIRS3L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_006076.4   .a 1 to 4810 1 to 4810 exact RefSeq, AAA   4810/4810
(100 %)
0 diff
(100 %id)
CV572846 cornea, eye .a 2 to 407 1 to 406   tiling clone,   406/406
(100 %)
1 diff
(99.8 %id)
BG395044 eye, retinoblastoma .a 7 to 566 1 to 562       562/562
(100 %)
9 diff
(98.4 %id)
BG910543 anaplastic oligodendroglioma with 1p/19qloss, brain .a 8 to 754 1 to 750       750/750
(100 %)
17 diff
(97.8 %id)
BM547827 brain, hippocampus .a 10 to 888 1 to 884       884/1088
(81 %)
14 diff
(98.8 %id)
AK314954 Kidney .a 15 to 1582 1 to 1568 exact     1568/1568
(100 %)
0 diff
(100 %id)
DA622375 Kidney .a 16 to 451 2 to 438   capped   437/437
(100 %)
0 diff
(100 %id)
CR597239 Placenta Cot 25-normalized .a 24 to 1845 1 to 1822 exact tiling clone,   1822/1822
(100 %)
0 diff
(100 %id)
BI831208 brain, medulla .a 25 to 780 1 to 771       733/772
(94 %)
26 diff
(96.7 %id)
TI_57177073   .a 25 to 780 61 to 831       733/832
(88 %)
27 diff
(96.8 %id)
BE735153 choriocarcinoma, placenta .a 39 to 798 49 to 805       757/881
(85 %)
21 diff
(97.7 %id)
AL554666 placenta, Placenta Cot 25-normalized .a 46 to 1014 22 to 987       966/987
(97 %)
12 diff
(98.8 %id)
BG774126 choriocarcinoma, placenta .a 48 to 846 1 to 800       800/801
(99 %)
23 diff
(97.2 %id)
BC017329 Placenta, choriocarcinoma .a 49 to 2237 1 to 2189 M349T available from MGC, AAA   2189/2189
(100 %)
1 diff
(100.0 %id)
BE408449 choriocarcinoma, placenta .a 68 to 624 1 to 560       560/561
(99 %)
10 diff
(98.3 %id)
BI822570 pooled brain, lung, testis .a 74 to 859 1 to 810       810/830
(97 %)
35 diff
(95.8 %id)
TI_57198166   .a 78 to 817 73 to 835       763/898
(84 %)
25 diff
(97.3 %id)
AF015042   .a 134 to 1625 58 to 1549 K6X E93X V96L D124N     1492/1549
(96 %)
8 diff
(99.5 %id)
CV029132 mixed .a 137 to 798 1 to 662       662/666
(99 %)
4 diff
(99.4 %id)
TI_1948132184   .a 137 to 848 136 to 856       721/1218
(59 %)
27 diff
(97.8 %id)
TI_1948132495   .a 137 to 969 136 to 992       857/1157
(74 %)
44 diff
(96.2 %id)
TI_1948133114   .a 137 to 892 137 to 895       759/1177
(64 %)
25 diff
(97.9 %id)
BM545728 ovary (pool of 3) .a 142 to 888 121 to 890       770/1165
(66 %)
34 diff
(97.1 %id)
BG479648 choriocarcinoma, placenta .a 192 to 726 154 to 693       674/815
(82 %)
50 diff
(93.9 %id)
BE733769 choriocarcinoma, placenta .a 200 to 814 168 to 795       698/951
(73 %)
46 diff
(95.2 %id)
AA338160 brain .a 332 to 636 1 to 306       306/306
(100 %)
2 diff
(99.4 %id)
AI880211 astrocytoma, brain .a 335 to 724 1 to 390     Submitted on the opposite strand 390/390
(100 %)
2 diff
(99.5 %id)
AI904927 breast .a 402 to 749 349 to 2       348/349
(99 %)
1 diff
(99.8 %id)
BI047075 prostate_normal .a 458 to 714 280 to 25       256/282
(90 %)
5 diff
(98.3 %id)
BQ053049 blood, natural killer cells, cell line .a 460 to 1182 1 to 723       723/931
(77 %)
24 diff
(97.5 %id)
CR626460 Neuroblastoma Cot 25-normalized .a 608 to 2556 1 to 1949   tiling clone,   1949/1949
(100 %)
0 diff
(100 %id)
AL527590 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 608 to 1560 1 to 948   fully sequenced,   948/948
(100 %)
7 diff
(99.3 %id)
CB055255 brain, glioblastoma (pooled) .a 673 to 1266 8 to 601       594/601
(98 %)
8 diff
(98.7 %id)
CB991177 placenta, pre-eclamptic placenta .a 732 to 1418 28 to 720       693/766
(90 %)
18 diff
(97.7 %id)
CB995197 placenta, pre-eclamptic placenta .a 732 to 1205 28 to 501       474/507
(93 %)
7 diff
(98.7 %id)
BE743609 adenocarcinoma cell line, ovary .a 755 to 1415 1 to 658       658/659
(99 %)
5 diff
(99.3 %id)
BG696651 skin .a 760 to 1550 1 to 786       786/812
(96 %)
21 diff
(97.5 %id)
TI_1948132496   .a 791 to 1581 922 to 124       799/1315
(60 %)
22 diff
(98.4 %id)
TI_1948133115   .a 791 to 1581 915 to 126       790/1283
(61 %)
20 diff
(98.5 %id)
BX349027 Placenta Cot 25-normalized .a 834 to 1608 1 to 774       774/832
(93 %)
21 diff
(97.5 %id)
BX349068 Placenta Cot 25-normalized .a 839 to 1223 1 to 385       385/462
(83 %)
10 diff
(97.9 %id)
BX371970 Placenta Cot 25-normalized .a 1004 to 1843 841 to 1       841/844
(99 %)
13 diff
(98.5 %id)
TI_1948132185   .a 1011 to 1581 695 to 124       572/1391
(41 %)
3 diff
(99.8 %id)
BQ709627 Spleen .a 1040 to 1818 1 to 792       792/933
(84 %)
26 diff
(97.3 %id)
BQ709606 Spleen .a 1040 to 1683 1 to 654       654/955
(68 %)
13 diff
(98.7 %id)
BQ710663 Spleen .a 1040 to 1866 1 to 844       844/953
(88 %)
31 diff
(96.8 %id)
BG108179 Bone, osteosarcoma, cell line .a 1066 to 1804 1 to 744       744/1007
(73 %)
34 diff
(96.7 %id)
BU539855 adenocarcinoma, cell line, breast .a 1097 to 1912 1 to 822       822/870
(94 %)
12 diff
(98.7 %id)
BX951055   .a 1235 to 1678 54 to 497       444/497
(89 %)
6 diff
(98.8 %id)
F07698 brain, total brain .a 1325 to 1662 1 to 339       339/339
(100 %)
2 diff
(99.5 %id)
Z45464 brain, total brain .a 1325 to 1674 1 to 350       350/350
(100 %)
1 diff
(99.8 %id)
R34090 placenta .a 1446 to 1753 1 to 308       308/308
(100 %)
3 diff
(99.1 %id)
CB055254 brain, glioblastoma (pooled) .a 1517 to 2079 630 to 68   AAA   563/587
(95 %)
0 diff
(100 %id)
AL562937 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1530 to 2556 1023 to 1   fully sequenced,   1023/1023
(100 %)
23 diff
(97.8 %id)
BX282758 lymph, lymphoma, cell line .a 1549 to 2016 1 to 468       468/472
(99 %)
2 diff
(99.6 %id)
BG025303 lymph, lymphoma, cell line .a 1553 to 2338 1 to 780       780/780
(100 %)
20 diff
(97.5 %id)
BQ883478 ductal carcinoma, cell line, Pancreas .a 1671 to 2498 1 to 837       837/978
(85 %)
29 diff
(97.1 %id)
BQ687815 ductal carcinoma, cell line, Pancreas .a 1671 to 2470 1 to 810       810/930
(87 %)
12 diff
(98.8 %id)
BM716210 eye, RPE and Choroid .a 1673 to 2103 1 to 430   fully sequenced,   430/430
(100 %)
3 diff
(99.4 %id)
AI421951 brain, glioblastoma (pooled) .a 1679 to 2079 419 to 19       401/419
(95 %)
0 diff
(100 %id)
CD723391 eye, lacrimal gland .a 1689 to 2331 1 to 641       641/641
(100 %)
2 diff
(99.7 %id)
CK822821 insulinoma, Pancreas .a 1743 to 2146 3 to 406   fully sequenced,   404/406
(99 %)
7 diff
(98.3 %id)
BM272818 insulinoma, Pancreas .a 1748 to 2186 8 to 446       439/446
(98 %)
6 diff
(98.7 %id)
BE832769 ovary .a 1823 to 2064 1 to 243       243/243
(100 %)
7 diff
(97.2 %id)
AW088953 ovary, tumor, 5 pooled (see description) .a 1827 to 2270 451 to 1       451/451
(100 %)
23 diff
(95.0 %id)
AI419330 brain, glioblastoma (pooled) .a 1835 to 2079 266 to 22       245/266
(92 %)
0 diff
(100 %id)
AW008825 brain, glioblastoma (pooled) .a 1841 to 2079 256 to 18       239/267
(89 %)
0 diff
(100 %id)
BQ943086 sciatic nerve .a 1878 to 2778 1 to 900       900/904
(99 %)
6 diff
(99.4 %id)
BQ006511 Chondrosarcoma, Left Pelvis .a 1920 to 2578 677 to 19   AAA   659/659
(100 %)
1 diff
(99.9 %id)
TI_149304132   .a 1931 to 2588 787 to 130       658/787
(83 %)
0 diff
(100 %id)
EC526854 Prostate .a 1989 to 2085 97 to 1       97/97
(100 %)
0 diff
(100 %id)
BQ687787 ductal carcinoma, cell line, Pancreas .a 2001 to 2405 330 to 737       408/961
(42 %)
12 diff
(98.8 %id)
BX482301.
matches multiple genes
  .a 2017 to 2627 22 to 631     also hits gene SCIN 610/631
(96 %)
6 diff
(99.1 %id)
AA011491 liver and spleen .a 2062 to 2529 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
BU732186 eye, RPE and Choroid .a 2073 to 2584 530 to 19   fully sequenced, AAA   512/512
(100 %)
2 diff
(99.7 %id)
CK822820 insulinoma, Pancreas .a 2116 to 2566 452 to 1   fully sequenced,   452/452
(100 %)
11 diff
(97.6 %id)
DR005851 Prostate .a 2148 to 2579 1 to 431       431/435
(99 %)
3 diff
(99.4 %id)
AA551469 thyroid .a 2215 to 2450 1 to 236       236/236
(100 %)
2 diff
(99.2 %id)
AK090744 cerebellum .a 2234 to 4810 1 to 2576   tiling clone, available from FLJ,   2576/2576
(100 %)
1 diff
(100.0 %id)
AX746598   .a 2234 to 4810 1 to 2576       2576/2576
(100 %)
1 diff
(100.0 %id)
DA070078 cerebellum .a 2235 to 2815 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
CN274412 embryonic stem cells, DMSO-treated H9 cellline .a 2240 to 2706 1 to 466       466/466
(100 %)
4 diff
(99.2 %id)
AW023759 cochlea, ear .a 2268 to 2405 8 to 145       138/145
(95 %)
6 diff
(95.9 %id)
DB268638 uterus .a 2292 to 2710 2 to 420   capped   419/419
(100 %)
1 diff
(99.8 %id)
AW879029 ovary .a 2297 to 2470 25 to 198       174/198
(87 %)
10 diff
(95.0 %id)
AI247494 liver and spleen .a 2313 to 2578 286 to 20   AAA   267/267
(100 %)
9 diff
(96.7 %id)
AI915987 colon, colon tumor, RER+ .a 2332 to 2583 248 to 1       248/248
(100 %)
8 diff
(96.8 %id)
F04331 brain, total brain .a 2365 to 2578 213 to 1       213/213
(100 %)
1 diff
(99.6 %id)
AI028678   .a 2440 to 2578 163 to 26   AAA   138/138
(100 %)
3 diff
(97.9 %id)
BG700290 brain, hippocampus .a 2447 to 2975 1 to 541   available from MGC,   541/545
(99 %)
24 diff
(95.6 %id)
BC047227 Brain, hippocampus .a 2451 to 4810 1 to 2359   available from MGC, AAA   2359/2359
(100 %)
3 diff
(99.9 %id)
T40281 ovary .a 2482 to 2578 1 to 97       97/97
(100 %)
0 diff
(100 %id)
CK429244 eye, lacrimal gland .a 2989 to 3634 1 to 647       647/647
(100 %)
1 diff
(99.9 %id)
W78927 liver and spleen .a 3442 to 3778 1 to 345       345/345
(100 %)
16 diff
(95.4 %id)
W86545 liver and spleen .a 3442 to 3901 1 to 466       466/466
(100 %)
13 diff
(97.3 %id)
AK057758 cerebellum .a 3448 to 4810 1 to 1363   available from FLJ,   1363/1363
(100 %)
1 diff
(100.0 %id)
N45192 liver and spleen .a 3595 to 3821 1 to 225       225/225
(100 %)
7 diff
(96.9 %id)
BG820682 anaplastic oligodendroglioma with 1p/19qloss, brain .a 3726 to 4454 1 to 729       729/732
(99 %)
5 diff
(99.4 %id)
CK429601 eye, lacrimal gland .a 3777 to 4406 1 to 630       630/630
(100 %)
0 diff
(100 %id)
BX105833 whole brain .a 3889 to 4421 1 to 533       533/533
(100 %)
0 diff
(100 %id)
H07976 whole brain .a 3938 to 4273 1 to 336       336/343
(97 %)
1 diff
(99.8 %id)
CA311591 Human Lung Epithelial cells, lung .a 4024 to 4810 807 to 19   AAA   789/789
(100 %)
8 diff
(99.0 %id)
BU608908 Human Lung Epithelial cells, lung .a 4081 to 4810 746 to 19   AAA   728/728
(100 %)
2 diff
(99.8 %id)
BF090952 ovary .a 4158 to 4547 393 to 4       390/399
(97 %)
0 diff
(100 %id)
BF843184 head_neck .a 4180 to 4540 1 to 361       361/361
(100 %)
0 diff
(100 %id)
W85913 liver and spleen .a 4195 to 4810 597 to 1       597/648
(92 %)
23 diff
(96.5 %id)
DB297473 cerebellum .a 4280 to 4810 532 to 1       532/532
(100 %)
1 diff
(99.9 %id)
W86449 liver and spleen .a 4346 to 4810 466 to 1       466/466
(100 %)
5 diff
(99.0 %id)
AA583408 germ cell tumor .a 4420 to 4809 395 to 7       389/395
(98 %)
0 diff
(100 %id)
TI_154089726   .a 4466 to 4810 444 to 100   AAA   345/544
(63 %)
0 diff
(100 %id)
CA433794 mixed .a 4466 to 4810 363 to 19   AAA   345/359
(96 %)
0 diff
(100 %id)
N39347 liver and spleen .a 4493 to 4811 321 to 2   tiling clone,   320/321
(99 %)
0 diff
(100 %id)
BQ223369 melanotic melanoma, skin .b 1 to 767 1 to 771   tiling clone,   771/902
(85 %)
13 diff
(98.6 %id)
BM917452 blood, natural killer cells, cell line .b 457 to 1208 1 to 759   tiling clone,   759/1070
(70 %)
21 diff
(98.1 %id)
CR611659 Neuroblastoma Cot 10-normalized .c 1 to 1864 1 to 1864 exact tiling clone,   1864/1864
(100 %)
0 diff
(100 %id)
AL519555 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 2 to 902 1 to 895   fully sequenced,   892/892
(100 %)
5 diff
(99.5 %id)
AL519554 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 872 to 1864 998 to 1   fully sequenced,   998/998
(100 %)
17 diff
(98.3 %id)
BF314987 brain, neuroblastoma .d 1 to 849 1 to 844 D127I P128L Q129R V131* tiling clone,   844/884
(95 %)
57 diff
(93.6 %id)
T78541 liver and spleen .d 766 to 1081 1 to 318       318/517
(61 %)
6 diff
(98.9 %id)
T78253 liver and spleen .d 766 to 1133 1 to 371   tiling clone,   371/371
(100 %)
6 diff
(98.4 %id)
AA010570 liver and spleen .d 888 to 1183 1 to 295   tiling clone,   295/303
(97 %)
4 diff
(98.7 %id)
T78086 liver and spleen .d 1600 to 1994 403 to 1   tiling clone,   403/403
(100 %)
8 diff
(98.1 %id)
AA010571 liver and spleen .d 1743 to 1992 250 to 1       250/250
(100 %)
1 diff
(99.6 %id)
BF310674 brain, neuroblastoma .e 1 to 669 1 to 659 H46T C47A F48S E49S C50A ...     659/660
(99 %)
19 diff
(97.2 %id)
BF312614 brain, neuroblastoma .e 1 to 762 1 to 750 C107A R108G K109R I110F W111G ...     752/825
(91 %)
14 diff
(98.4 %id)
BF317025 brain, neuroblastoma .e 1 to 677 1 to 676 D127I P128L Q129R V131* tiling clone, available from MGC,   676/740
(91 %)
6 diff
(99.2 %id)
BC009393 Brain, neuroblastoma .e 2 to 1325 1 to 1324 exact tiling clone, available from MGC, AAA   1324/1324
(100 %)
0 diff
(100 %id)
CV030093 mixed .e 137 to 611 1 to 476 exact     476/586
(81 %)
5 diff
(99.2 %id)
BQ423323 melanotic melanoma, skin .f 1 to 471 1 to 420   tiling clone, Suspected internal deletion 420/1090
(38 %)
6 diff
(99.5 %id)
BI767196 pooled lung and spleen .f 248 to 804 318 to 873   tiling clone,   556/887
(62 %)
15 diff
(98.4 %id)
TI_57183646   .f 248 to 804 353 to 908       556/922
(60 %)
15 diff
(98.4 %id)
DB046664 testis .g 1 to 569 2 to 570 exact tiling clone, to resequence, capped   569/569
(100 %)
0 diff
(100 %id)
DB338251 testis .g 1498 to 1798 302 to 1   tiling clone, to resequence,   302/302
(100 %)
1 diff
(99.7 %id)
BI907205 leukocyte Gene AGFG2andIRS3L, variant not shown         Suspected internal deletion, this clone was ignored    
TI_57233886   Gene AGFG2andIRS3L, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI