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Gene HOXD13TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
13 supporting clones for gene HOXD13 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_000523.3   .a 1 to 2327 1 to 2327 exact RefSeq, AAA   2327/2327
(100 %)
0 diff
(100 %id)
AI858239 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 457 to 910 1 to 454   tiling clone, Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
AI971733 pooled germ cell tumors .a 475 to 1116 1 to 642     Submitted on the opposite strand 642/642
(100 %)
5 diff
(99.3 %id)
BG203557   .a 863 to 1497 1 to 633   tiling clone,   633/753
(84 %)
6 diff
(99.3 %id)
BG204577   .a 865 to 1638 1 to 774   tiling clone,   774/775
(99 %)
18 diff
(97.7 %id)
BG187695   .a 868 to 1472 63 to 666   tiling clone,   604/759
(79 %)
39 diff
(94.9 %id)
BE047838 brain, tumor, 5 pooled (see description) .a 1589 to 1960 1 to 372   tiling clone, fully sequenced,   372/372
(100 %)
0 diff
(100 %id)
AI971104 Prostate .a 1790 to 2316 539 to 12       528/539
(97 %)
0 diff
(100 %id)
BX100910 brain, tumor, 5 pooled (see description) .a 1862 to 2327 481 to 15   tiling clone, AAA   467/467
(100 %)
1 diff
(99.8 %id)
CB048000 Prostate .a 1880 to 2325 482 to 37   tiling clone, AAA   446/454
(98 %)
0 diff
(100 %id)
AI863090 brain, tumor, 5 pooled (see description) .a 1930 to 2177 248 to 1   fully sequenced,   248/248
(100 %)
0 diff
(100 %id)
AA578211 Prostate, prostatic intraepithelial neoplasia - highgrade .a 1954 to 2177 224 to 1       224/229
(97 %)
1 diff
(99.6 %id)
AA548783 normal prostate, Prostate .a 2011 to 2326 322 to 7       316/322
(98 %)
0 diff
(100 %id)
AI202703 Prostate Gene HOXD13, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes DCI