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Gene HOXA7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
29 supporting clones for gene HOXA7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP263590 small intestine .a 1 to 585 1 to 586 exact tiling clone,   586/586
(100 %)
4 diff
(99.4 %id)
DA917904 small intestine .a 361 to 885 2 to 526   tiling clone, capped   525/525
(100 %)
4 diff
(99.3 %id)
AF026397   .a 362 to 1314 1 to 953   tiling clone,   953/954
(99 %)
3 diff
(99.7 %id)
NM_006896.3   .a 362 to 2379 1 to 2018   RefSeq,   2018/2018
(100 %)
0 diff
(100 %id)
BC061916 Bone, osteosarcoma .a 385 to 1287 1 to 901   available from MGC, AAA Possibly primed on the genome, locally A rich (22/25 A in genome downstream of last aligned base) 901/901
(100 %)
4 diff
(99.6 %id)
BG110135 Bone, osteosarcoma, cell line .a 385 to 614 1 to 229   available from MGC,   229/229
(100 %)
3 diff
(98.7 %id)
DA981621 synovial membrane tissue from rheumatioidarthritis .a 386 to 865 2 to 481   capped   480/480
(100 %)
2 diff
(99.6 %id)
DA384585 thalamus .a 420 to 1016 2 to 598   capped   597/597
(100 %)
2 diff
(99.7 %id)
CF127328 Chondrosarcoma Lung Metastasis cell lines, lung .a 511 to 1135 1 to 625       625/625
(100 %)
2 diff
(99.7 %id)
TI_154190882   .a 511 to 1261 51 to 801       751/755
(99 %)
7 diff
(99.1 %id)
DA539735 Kidney .a 753 to 1295 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
AA187553   .a 803 to 1263 1 to 460   fully sequenced,   460/460
(100 %)
13 diff
(97.2 %id)
AI287617 placenta .a 827 to 1391 564 to 1   tiling clone,   564/564
(100 %)
4 diff
(99.3 %id)
AA181926   .a 958 to 1266 312 to 1   fully sequenced,   312/312
(100 %)
9 diff
(97.2 %id)
AA126727 uterus .b 1 to 430 426 to 1 K9X G11A R12X T20S L21W ... tiling clone,   426/426
(100 %)
10 diff
(97.7 %id)
AI276905 placenta .b 29 to 534 506 to 1   tiling clone,   506/506
(100 %)
0 diff
(100 %id)
AI150373   .b 54 to 500 449 to 1       449/449
(100 %)
11 diff
(97.6 %id)
BQ668813 epidermoid carcinoma, cell line, salivary gland .b 63 to 437 74 to 451   AAA Possibly primed on the genome, locally A rich (16/18 A in genome downstream of last aligned base) 378/451
(83 %)
6 diff
(98.7 %id)
AI027254   .b 80 to 534 455 to 1       455/455
(100 %)
1 diff
(99.8 %id)
AI214714   .b 99 to 500 399 to 1       399/463
(86 %)
17 diff
(96.4 %id)
AI762187 colon, colon tumor, RER+ .b 269 to 385 117 to 1       117/118
(99 %)
2 diff
(98.4 %id)
AI985100 Kidney .b 315 to 448 134 to 1       134/134
(100 %)
0 diff
(100 %id)
BF820383 kidney_tumor .b 580 to 1068 7 to 489   tiling clone,   483/490
(98 %)
6 diff
(98.8 %id)
BE706142 head_neck .b 600 to 1086 14 to 497   tiling clone,   484/497
(97 %)
27 diff
(94.6 %id)
BE706114 head_neck .b 616 to 1020 12 to 428   tiling clone,   417/428
(97 %)
6 diff
(98.6 %id)
BE146039 head_neck .b 617 to 1033 14 to 429   tiling clone,   416/429
(96 %)
6 diff
(98.7 %id)
BE146237 head_neck .b 622 to 1206 1 to 585   tiling clone,   585/596
(98 %)
11 diff
(98.2 %id)
BE146379 head_neck .b 633 to 1212 1 to 580   tiling clone,   580/589
(98 %)
21 diff
(96.5 %id)
F37656 pectoral muscle (after mastectomy) .b 1316 to 1390 1 to 75   tiling clone,   75/75
(100 %)
2 diff
(97.4 %id)
BX104300   .c 1 to 478 57 to 534 exact tiling clone,   478/534
(89 %)
6 diff
(98.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI