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Gene HNRNPKTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
914 representative clones for gene HNRNPK back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC390685 Spleen .a 1 to 586 1 to 586   tiling clone,   586/586
(100 %)
0 diff
(100 %id)
BQ307869 breast .a 2 to 480 4 to 487       484/487
(99 %)
24 diff
(95.1 %id)
DC347309 tongue, tumor tissue .a 8 to 577 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC301169 bladder .a 13 to 580 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC350341 brain .a 13 to 589 1 to 577       577/577
(100 %)
0 diff
(100 %id)
BG715322 brain, hypothalamus .a 24 to 796 1 to 780       780/780
(100 %)
28 diff
(96.5 %id)
DB243553 stomach, tumor tissue .a 24 to 595 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DC295308 synovial membrane tissue from rheumatioidarthritis .a 25 to 582 1 to 560       560/560
(100 %)
4 diff
(99.3 %id)
BP872278 embryonal kidney .a 27 to 606 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DC392895 breast, tumor tissue .a 27 to 589 1 to 563       563/563
(100 %)
3 diff
(99.5 %id)
DA456481 tongue, tumor tissue .a 28 to 610 2 to 584   capped   583/588
(99 %)
1 diff
(99.9 %id)
DC425352   .a 28 to 574 1 to 547       547/547
(100 %)
2 diff
(99.7 %id)
DC304976 cerebellum .a 29 to 590 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC305935 cerebellum .a 29 to 573 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
DC341275 thalamus .a 29 to 561 1 to 533       533/533
(100 %)
1 diff
(99.9 %id)
DC350901 brain .a 29 to 561 1 to 533       533/533
(100 %)
1 diff
(99.9 %id)
DC428309   .a 29 to 556 1 to 528       528/528
(100 %)
1 diff
(99.9 %id)
DA653128   .a 29 to 620 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
DC363865   .a 29 to 511 1 to 483       483/483
(100 %)
0 diff
(100 %id)
DC368991   .a 29 to 537 1 to 510       510/510
(100 %)
1 diff
(99.9 %id)
DC376207 brain .a 29 to 445 1 to 418       418/439
(95 %)
2 diff
(99.6 %id)
DA816409   .a 29 to 595 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA942597 Spleen .a 29 to 602 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DC391629 Spleen .a 29 to 580 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC392324 stomach .a 29 to 484 1 to 458       458/458
(100 %)
5 diff
(99.0 %id)
DC405665 thymus .a 29 to 561 1 to 533       533/533
(100 %)
1 diff
(99.9 %id)
DB262961 uterus .a 29 to 629 2 to 602   capped   601/601
(100 %)
0 diff
(100 %id)
DA063459 cerebellum .a 30 to 595 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DC313581 amygdala .a 30 to 592 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
DA169975 amygdala .a 30 to 599 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA509326 brain .a 30 to 604 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA530550 brain .a 30 to 634 2 to 607   capped   606/607
(99 %)
2 diff
(99.7 %id)
DA682872   .a 30 to 837 2 to 809   capped   808/808
(100 %)
4 diff
(99.6 %id)
DC370486   .a 30 to 561 1 to 532       532/532
(100 %)
0 diff
(100 %id)
DC406068 thymus .a 30 to 586 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DB169516 kidney, tumor tissue .a 30 to 617 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DC346850 tongue, tumor tissue .a 31 to 579 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
DA613912   .a 31 to 606 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA345218 substantia nigra .a 35 to 600 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DC301602   .a 36 to 576 1 to 542       542/542
(100 %)
2 diff
(99.7 %id)
DC309182 cerebellum .a 36 to 586 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC349361   .a 36 to 584 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DA546227   .a 36 to 600 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BI549663 brain, hippocampus .a 36 to 806 6 to 779       774/779
(99 %)
11 diff
(98.6 %id)
TI_44170870   .a 36 to 806 127 to 900       774/900
(86 %)
10 diff
(98.9 %id)
DC378176   .a 36 to 561 1 to 526       526/526
(100 %)
0 diff
(100 %id)
DC421079 uterus .a 36 to 549 1 to 516       516/524
(98 %)
5 diff
(99.1 %id)
DA015760 adrenal gland .a 37 to 600 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA050228   .a 37 to 603 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA165540 amygdala .a 37 to 620 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA369360 subthalamic nucleus .a 37 to 603 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA396631 thalamus .a 37 to 630 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
DA472160   .a 37 to 860 2 to 827   capped   826/831
(99 %)
13 diff
(98.5 %id)
DA521103 brain .a 37 to 604 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA527966 brain .a 37 to 623 2 to 589   capped   588/588
(100 %)
3 diff
(99.5 %id)
DA580108   .a 37 to 608 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA706232   .a 37 to 613 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA774092 brain .a 37 to 541 2 to 509   capped   508/512
(99 %)
5 diff
(99.1 %id)
DB504016 hypothalamus .a 39 to 516 1 to 478       478/478
(100 %)
0 diff
(100 %id)
DB005197 breast, tumor tissue .a 41 to 604 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DC376417 brain .a 46 to 381 1 to 336       336/336
(100 %)
0 diff
(100 %id)
CN264520 embryonic stem cells, cell lines H1, H7, andH9 .a 47 to 732 1 to 686       686/686
(100 %)
3 diff
(99.6 %id)
DA510174 brain .a 50 to 596 2 to 549   capped   548/548
(100 %)
3 diff
(99.5 %id)
DC394271 esophageal, tumor tissue .a 53 to 584 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
DA131102 alzheimer cortex .a 55 to 597 2 to 545   capped   544/544
(100 %)
4 diff
(99.3 %id)
DA132240 alzheimer cortex .a 55 to 627 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA286790 corpus callosum .a 55 to 618 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DB186027 liver, tumor tissue .a 55 to 634 2 to 581   capped   580/581
(99 %)
2 diff
(99.7 %id)
BU599677 mixed (pool of 40 RNAs) .a 57 to 841 1 to 792       792/796
(99 %)
14 diff
(98.3 %id)
DB246877   .a 60 to 611 2 to 553   capped   552/553
(99 %)
2 diff
(99.7 %id)
AL531108 brain, fetal liver, Liver, neuroblastoma cells .a 62 to 1067 1 to 995   tiling clone, fully sequenced,   995/995
(100 %)
13 diff
(98.7 %id)
DA577259   .a 63 to 594 2 to 534   capped   533/533
(100 %)
2 diff
(99.7 %id)
DB167002 kidney, tumor tissue .a 63 to 623 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
CN264527 embryonic stem cells, DMSO-treated H9 cellline .a 66 to 267 1 to 202       202/202
(100 %)
1 diff
(99.6 %id)
DA904152   .a 67 to 636 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BU932025 ovary, teratocarcinoma, cell line .a 69 to 985 1 to 920   tiling clone,   920/921
(99 %)
8 diff
(99.2 %id)
DA997635   .a 71 to 633 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
TI_44346190   .a 78 to 748 85 to 752       668/754
(88 %)
9 diff
(98.9 %id)
BF530309 anaplastic oligodendroglioma with 1p/19qloss, brain .a 86 to 844 1 to 749       751/937
(80 %)
27 diff
(97.2 %id)
BU959662 mixed (pool of 40 RNAs) .a 94 to 829 1 to 745       745/820
(90 %)
15 diff
(98.2 %id)
AL563947 brain, fetal liver, Liver, neuroblastoma cells .a 1037 to 2091 1045 to 1   tiling clone, fully sequenced,   1045/1045
(100 %)
18 diff
(98.3 %id)
NM_002140.3   .b 1 to 2977 1 to 2977 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2977/2977
(100 %)
0 diff
(100 %id)
AU142793   .b 29 to 769 2 to 741   tiling clone, capped   740/741
(99 %)
4 diff
(99.5 %id)
AU142565   .b 31 to 775 2 to 747   capped   746/806
(92 %)
7 diff
(99.2 %id)
AU128028   .b 45 to 661 2 to 620   tiling clone, capped   619/632
(97 %)
6 diff
(99.1 %id)
AK291336 tongue .b 51 to 1729 1 to 1679 exact tiling clone,   1679/1679
(100 %)
1 diff
(100.0 %id)
X72727   .b 51 to 2884 1 to 2830 A32D tiling clone,   2830/2830
(100 %)
12 diff
(99.6 %id)
AL560532 B cells (Ramos cell line), B cells from Burkitt lymphoma .b 60 to 885 1 to 825       825/825
(100 %)
22 diff
(97.4 %id)
BX406654 fetal liver, Liver .b 73 to 1020 1 to 943       943/943
(100 %)
7 diff
(99.3 %id)
CX868203 embryonic stem .b 114 to 769 1 to 656       656/656
(100 %)
0 diff
(100 %id)
AY911506 colorectal cancer and surrounding mucosa .b 197 to 1815 1 to 1619 A92T     1619/1619
(100 %)
2 diff
(99.9 %id)
AB451263   .b 260 to 1654 1 to 1395 exact     1395/1395
(100 %)
0 diff
(100 %id)
AB451390   .b 260 to 1651 1 to 1392       1392/1392
(100 %)
0 diff
(100 %id)
CR456771   .b 260 to 1654 1 to 1395 exact     1395/1395
(100 %)
1 diff
(100.0 %id)
TI_1948094252   .b 260 to 904 127 to 771       645/1341
(48 %)
6 diff
(99.6 %id)
TI_1948094545   .b 260 to 935 127 to 802   fully sequenced,   676/802
(84 %)
6 diff
(99.3 %id)
TI_1948094699   .b 260 to 1029 126 to 882   fully sequenced,   757/882
(85 %)
7 diff
(99.3 %id)
BX426309 B cells (Ramos cell line) .b 274 to 974 211 to 916       704/747
(94 %)
17 diff
(97.8 %id)
BM463947 melanotic melanoma, skin .b 786 to 1753 25 to 999       920/1142
(80 %)
33 diff
(97.2 %id)
BU156215 melanotic melanoma, skin .b 830 to 1714 1 to 895       895/900
(99 %)
17 diff
(98.2 %id)
BU557196 ovary, teratocarcinoma, cell line .b 855 to 1680 34 to 866       833/892
(93 %)
20 diff
(97.8 %id)
BM454826 leiomyosarcoma, uterus .b 861 to 1752 1 to 907       907/1088
(83 %)
37 diff
(96.6 %id)
TI_1948094253   .b 903 to 1653 875 to 125       751/1241
(60 %)
1 diff
(100.0 %id)
TI_1948094546   .b 903 to 1653 874 to 124   fully sequenced,   751/874
(85 %)
1 diff
(99.9 %id)
TI_1948094395   .b 905 to 1653 874 to 121       754/1337
(56 %)
16 diff
(98.9 %id)
BM811283 amelanotic melanoma, cell line, skin .b 915 to 1837 1 to 929       929/1020
(91 %)
36 diff
(96.5 %id)
BX432041 adult brain, brain .b 944 to 1809 1 to 867       867/941
(92 %)
29 diff
(97.0 %id)
BX432042 adult brain, brain .b 950 to 1857 1 to 918       918/918
(100 %)
32 diff
(96.6 %id)
BM462227 eye, retinoblastoma .b 950 to 1880 12 to 943       932/1065
(87 %)
29 diff
(97.3 %id)
CT001198 T-Lymphocytes .b 962 to 1766 1 to 804       804/806
(99 %)
4 diff
(99.6 %id)
AW249093 lung, small cell carcinoma .b 978 to 1474 10 to 506       497/506
(98 %)
6 diff
(98.9 %id)
TI_1948094700   .b 999 to 1653 781 to 125   fully sequenced,   657/781
(84 %)
2 diff
(99.8 %id)
BX447601 B cells (Ramos cell line) .b 1000 to 1366 1 to 367   fully sequenced,   367/367
(100 %)
4 diff
(99.0 %id)
BG106186 lymph, lymphoma, cell line .b 1005 to 1748 1 to 741       741/976
(75 %)
10 diff
(99.0 %id)
BG680050 skin, squamous cell carcinoma .b 1035 to 1879 1 to 841       841/841
(100 %)
15 diff
(98.3 %id)
BQ435390 leiomyosarcoma, uterus .b 1073 to 1876 1 to 812       812/845
(96 %)
22 diff
(97.4 %id)
CB128049 Liver .b 1086 to 1644 1 to 559       559/559
(100 %)
0 diff
(100 %id)
BX505358   .b 1092 to 1747 1 to 656       656/656
(100 %)
0 diff
(100 %id)
BQ215140 melanotic melanoma, skin .b 1103 to 1944 1 to 849       849/852
(99 %)
8 diff
(99.1 %id)
BX406653 fetal liver, Liver .b 1127 to 2107 980 to 5       976/980
(99 %)
13 diff
(98.7 %id)
BY993672   .b 1212 to 1880 30 to 699       671/702
(95 %)
7 diff
(99.1 %id)
BX426308 B cells (Ramos cell line) .b 1215 to 1923 918 to 209       710/918
(77 %)
1 diff
(99.9 %id)
BU178250 melanotic melanoma, skin .b 1245 to 2027 12 to 800       789/817
(96 %)
13 diff
(98.5 %id)
AL581966 B cells (Ramos cell line), B cells from Burkitt lymphoma .b 1265 to 1910 880 to 236       645/887
(72 %)
10 diff
(98.9 %id)
BQ929703 leiomyosarcoma, uterus .b 1274 to 2027 1 to 760       760/937
(81 %)
12 diff
(98.8 %id)
TI_149309372   .b 1274 to 2151 953 to 90   AAA   864/962
(89 %)
17 diff
(98.3 %id)
BX447600 B cells (Ramos cell line) .b 1321 to 2122 810 to 10   fully sequenced,   801/810
(98 %)
5 diff
(99.4 %id)
BQ007790 Chondrosarcoma, Left Pelvis .b 1370 to 2151 795 to 19   AAA   777/786
(98 %)
6 diff
(99.3 %id)
TI_149315391   .b 1370 to 2151 865 to 89   AAA   777/946
(82 %)
13 diff
(98.7 %id)
TI_149296274   .b 1373 to 2151 850 to 79   AAA   772/952
(81 %)
10 diff
(99.0 %id)
AW604232 colon .b 1395 to 1902 1 to 508       508/508
(100 %)
0 diff
(100 %id)
BM718881 eye, fetal eye .b 1410 to 1865 1 to 456       456/456
(100 %)
0 diff
(100 %id)
AW673391 cervix .b 1412 to 1651 1 to 240   fully sequenced,   240/240
(100 %)
1 diff
(99.6 %id)
BU684263 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 1441 to 2151 728 to 19   AAA   710/710
(100 %)
4 diff
(99.5 %id)
CF265076 Brain glioblastoma .b 1468 to 2332 1 to 879   tiling clone,   879/889
(98 %)
25 diff
(97.2 %id)
BU165555 eye, retinoblastoma .b 1471 to 2275 1 to 814       814/932
(87 %)
30 diff
(96.8 %id)
BQ440648 melanotic melanoma, skin .b 1486 to 2329 1 to 852       852/870
(97 %)
15 diff
(98.3 %id)
BG674997 skin .b 1537 to 2360 1 to 834       834/1012
(82 %)
49 diff
(95.2 %id)
CX868117 embryonic stem .b 1566 to 2151 617 to 33   AAA   585/585
(100 %)
6 diff
(99.0 %id)
AU159854   .b 1618 to 2151 533 to 1       533/570
(93 %)
9 diff
(98.5 %id)
AW248658 lung, small cell carcinoma .b 1619 to 2151 543 to 11   AAA   533/537
(99 %)
1 diff
(99.9 %id)
AW675739 cervix .b 1619 to 2151 488 to 16   fully sequenced, AAA   473/473
(100 %)
0 diff
(100 %id)
AU150364   .b 1619 to 2151 531 to 1       531/581
(91 %)
9 diff
(98.5 %id)
DB384256   .b 1619 to 2151 531 to 1       531/564
(94 %)
23 diff
(96.0 %id)
CA394854 eye, RPE/choroid .b 1622 to 2128 1 to 507       507/507
(100 %)
0 diff
(100 %id)
AA309191 heart .b 1633 to 1799 1 to 167       167/167
(100 %)
0 diff
(100 %id)
CN264477 embryonic stem cells, DMSO-treated H9 cellline .b 1641 to 1915 1 to 275       275/275
(100 %)
0 diff
(100 %id)
BE074395 breast .b 1652 to 1840 201 to 13     Submitted on the opposite strand 189/201
(94 %)
0 diff
(100 %id)
BE047317 ovary, serous papillary tumor .b 1659 to 2151 505 to 13   AAA   493/493
(100 %)
0 diff
(100 %id)
AI126094 placenta .b 1670 to 2150 481 to 1       481/481
(100 %)
0 diff
(100 %id)
AI829166 adenocarcinoma, Pancreas .b 1670 to 2151 482 to 1       482/482
(100 %)
0 diff
(100 %id)
AI139073 uterus .b 1675 to 2152 486 to 9       478/486
(98 %)
0 diff
(100 %id)
NM_031263.2   .c 1 to 2941 2 to 2942 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2942/2942
(100 %)
0 diff
(100 %id)
DA394419 thalamus .c 1 to 585 2 to 586   tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
DB181452 liver, tumor tissue .c 19 to 589 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DC361464 Kidney .c 20 to 574 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC316526 amygdala .c 23 to 578 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DA039567 bladder .c 24 to 603 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DC314683 amygdala .c 25 to 552 1 to 528       528/528
(100 %)
0 diff
(100 %id)
DC384858   .c 25 to 575 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC405634 thymus .c 25 to 537 1 to 513       513/513
(100 %)
0 diff
(100 %id)
DA388383 thalamus .c 26 to 621 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA730137   .c 26 to 834 2 to 812   capped   811/812
(99 %)
4 diff
(99.6 %id)
DA763023 tongue .c 26 to 597 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA904900   .c 26 to 599 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB008716 cervix, tumor tissue .c 26 to 585 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB077315 testis .c 26 to 600 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA931977 Spleen .c 48 to 591 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DC365673   .c 50 to 579 1 to 530       530/530
(100 %)
0 diff
(100 %id)
DA076911 cerebellum .c 51 to 597 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA173517 amygdala .c 51 to 620 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA587827 lung .c 51 to 629 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
AU121627 mammary gland .c 51 to 783 2 to 734   capped   733/733
(100 %)
1 diff
(99.9 %id)
DA664439   .c 51 to 820 2 to 777   capped   776/778
(99 %)
12 diff
(98.5 %id)
DC386192   .c 53 to 528 1 to 476       476/476
(100 %)
0 diff
(100 %id)
DC424905   .c 54 to 576 1 to 523       523/523
(100 %)
0 diff
(100 %id)
DB458062 testis .c 54 to 553 1 to 500       500/500
(100 %)
0 diff
(100 %id)
DB458511 testis .c 54 to 525 1 to 472       472/472
(100 %)
0 diff
(100 %id)
BQ216186 large cell carcinoma, lung .c 54 to 892 1 to 848       845/856
(98 %)
13 diff
(98.5 %id)
DA606649   .c 54 to 591 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA621899 Kidney .c 54 to 595 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA650871   .c 54 to 604 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BM833680 stomach .c 54 to 649 1 to 596       596/596
(100 %)
0 diff
(100 %id)
DC388895 small intestine .c 54 to 537 1 to 484       484/484
(100 %)
0 diff
(100 %id)
DA940403 Spleen .c 54 to 638 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA970870 synovial membrane tissue from rheumatioidarthritis .c 54 to 591 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB102225 thymus .c 54 to 608 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB106874 thymus .c 54 to 619 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DC411986 kidney, tumor tissue .c 54 to 506 1 to 453       453/453
(100 %)
0 diff
(100 %id)
DC415138 trachea .c 54 to 552 1 to 499       499/499
(100 %)
0 diff
(100 %id)
DA000091   .c 55 to 810 2 to 756   capped   755/765
(98 %)
8 diff
(99.0 %id)
DA045131 bladder .c 55 to 620 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA061426 cerebellum .c 55 to 617 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA068679 cerebellum .c 55 to 617 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA070180 cerebellum .c 55 to 591 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA075745 cerebellum .c 55 to 629 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA299464 hippocampus .c 55 to 632 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA419953 cord Blood .c 55 to 630 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA452883 tongue, tumor tissue .c 55 to 614 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA503551 brain .c 55 to 647 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA521384 brain .c 55 to 627 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA532629 brain .c 55 to 632 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA557277   .c 55 to 595 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA565602 heart .c 55 to 622 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA614528   .c 55 to 625 2 to 572   capped   571/572
(99 %)
0 diff
(100 %id)
DA632732 Kidney .c 55 to 591 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA661528   .c 55 to 629 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA677547   .c 55 to 653 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DC366276   .c 55 to 521 1 to 467       467/467
(100 %)
0 diff
(100 %id)
DA711927   .c 55 to 620 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA745423   .c 55 to 629 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DC378299   .c 55 to 552 1 to 498       498/498
(100 %)
0 diff
(100 %id)
AU135322 placenta .c 55 to 737 2 to 688   capped   687/803
(85 %)
5 diff
(99.4 %id)
DA867754 Prostate .c 55 to 597 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA869742 Prostate .c 55 to 610 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA902836   .c 55 to 616 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA937297 Spleen .c 55 to 591 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB041432 testis .c 55 to 605 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB107763 thymus .c 55 to 635 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB114923 thymus .c 55 to 610 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB115024 thymus .c 55 to 621 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB115506 thymus .c 55 to 607 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB121872 thymus .c 55 to 608 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB122664 thymus .c 55 to 592 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB125174 thymus .c 55 to 624 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB126505 thymus .c 55 to 614 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB128628 thymus .c 55 to 611 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB253216 uterus .c 55 to 625 2 to 572   capped   571/579
(98 %)
0 diff
(100 %id)
DA045837 bladder .c 56 to 591 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA497157 brain .c 56 to 623 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA616085   .c 56 to 591 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA752558   .c 56 to 591 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA793202 brain .c 56 to 642 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA999101 breast, tumor tissue .c 56 to 607 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB106455 thymus .c 56 to 608 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB255412 uterus .c 56 to 649 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DB261610 uterus .c 56 to 622 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
AU138698.
matches multiple genes
placenta .c 57 to 794 2 to 742   capped also hits gene LOC389322 739/744
(99 %)
11 diff
(98.6 %id)
DB117581 thymus .c 57 to 612 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA488517 brain .c 59 to 611 8 to 560   capped   553/553
(100 %)
0 diff
(100 %id)
DA643561   .c 59 to 595 9 to 545   capped   537/537
(100 %)
0 diff
(100 %id)
DB130562 thymus .c 59 to 597 8 to 546   capped   539/539
(100 %)
0 diff
(100 %id)
DC344862 colon .c 61 to 528 1 to 468       468/468
(100 %)
0 diff
(100 %id)
BJ995996 hepatoblastoma .c 61 to 660 1 to 600       600/600
(100 %)
0 diff
(100 %id)
DC362436 Kidney .c 61 to 570 1 to 510       510/510
(100 %)
0 diff
(100 %id)
DC378488   .c 61 to 552 1 to 492       492/492
(100 %)
0 diff
(100 %id)
DC407189 thymus .c 61 to 537 1 to 477       477/477
(100 %)
0 diff
(100 %id)
DB182421 liver, tumor tissue .c 61 to 610 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA046513 bladder .c 62 to 591 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA049580   .c 62 to 625 2 to 565   capped   564/565
(99 %)
0 diff
(100 %id)
DA056566 cerebellum .c 62 to 657 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA068100 cerebellum .c 62 to 630 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA131777 alzheimer cortex .c 62 to 602 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA419114 cord Blood .c 62 to 615 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA473883   .c 62 to 634 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA520802 brain .c 62 to 622 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA538627 Kidney .c 62 to 630 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA573255   .c 62 to 811 2 to 751   capped   750/750
(100 %)
2 diff
(99.8 %id)
DA650721   .c 62 to 610 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA660489   .c 62 to 629 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA666019   .c 62 to 617 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA671026   .c 62 to 643 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA705994   .c 62 to 617 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA708122   .c 62 to 602 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA713823   .c 62 to 607 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA715888   .c 62 to 608 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
AU125997   .c 62 to 765 2 to 704   capped   703/703
(100 %)
2 diff
(99.8 %id)
DA746925   .c 62 to 638 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA749020   .c 62 to 621 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA751653   .c 62 to 640 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA776272 brain .c 62 to 632 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA783704 brain .c 62 to 651 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA814811   .c 62 to 627 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA906455   .c 62 to 624 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA935933 Spleen .c 62 to 591 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DB011363 colon, tumor tissue .c 62 to 634 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB116487 thymus .c 62 to 617 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB120558 thymus .c 62 to 602 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB121190 thymus .c 62 to 631 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB121988 thymus .c 62 to 591 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DB128041 thymus .c 62 to 617 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB204348 trachea .c 62 to 632 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB242171 stomach, tumor tissue .c 62 to 629 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB242775 stomach, tumor tissue .c 62 to 591 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DB263457 uterus .c 62 to 650 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB265883 uterus .c 62 to 630 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BP871802 embryonal kidney .c 63 to 644 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC364206   .c 63 to 552 1 to 490       490/490
(100 %)
0 diff
(100 %id)
DB116434 thymus .c 63 to 591 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA018475   .c 64 to 622 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA372861 thalamus .c 64 to 591 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA610301   .c 64 to 615 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA928892 small intestine .c 64 to 617 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB147821 thymus .c 64 to 625 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB273636 uterus .c 64 to 623 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA477637   .c 65 to 591 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DA555154   .c 65 to 623 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA780411 brain .c 65 to 651 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA018601   .c 66 to 629 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA075579 cerebellum .c 66 to 629 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA075975 cerebellum .c 66 to 610 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA091886 cerebellum .c 66 to 625 2 to 561   capped   560/561
(99 %)
0 diff
(100 %id)
DA157138 amygdala .c 66 to 618 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA437073 tongue, tumor tissue .c 66 to 650 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA607822   .c 66 to 670 2 to 606   capped   605/605
(100 %)
0 diff
(100 %id)
DA610858   .c 66 to 635 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA909664   .c 66 to 642 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB056543 testis .c 66 to 606 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB177387 kidney, tumor tissue .c 66 to 606 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
CN264582 embryonic stem cells, DMSO-treated H9 cellline .c 67 to 706 1 to 640       640/640
(100 %)
0 diff
(100 %id)
BU150756 dorsal root ganglia .c 68 to 959 1 to 893       893/954
(93 %)
17 diff
(98.3 %id)
DB176494 kidney, tumor tissue .c 68 to 629 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
AU142470   .c 69 to 803 2 to 734   capped   733/733
(100 %)
8 diff
(99.0 %id)
BE730772 choriocarcinoma, placenta .c 70 to 909 1 to 835       835/1019
(81 %)
20 diff
(98.1 %id)
BQ889057 dorsal root ganglia .c 70 to 959 1 to 897       897/904
(99 %)
15 diff
(98.4 %id)
BJ991472 hepatoblastoma .c 71 to 652 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CD557376 testis .c 71 to 854 1 to 792       792/888
(89 %)
13 diff
(98.6 %id)
DA292783 hippocampus .c 72 to 650 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA387399 thalamus .c 72 to 651 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA475380   .c 72 to 618 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA636702 Kidney .c 72 to 642 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
AU137312 placenta .c 72 to 846 2 to 785   capped   784/813
(96 %)
13 diff
(98.5 %id)
DB108446 thymus .c 72 to 645 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BX442622.
matches multiple genes
brain, fetal brain .c 75 to 1038 1 to 955     also hits gene LOC644063 955/959
(99 %)
19 diff
(98.1 %id)
BX462297 B cells (Ramos cell line) .c 75 to 951 1 to 880       880/880
(100 %)
12 diff
(98.7 %id)
AL557776.
matches multiple genes
T cells from T cell leukemia .c 76 to 1132 1 to 1041     Suspected internal deletion, this clone was ignored, also hits gene LOC644063 1041/1067
(97 %)
18 diff
(98.4 %id)
BQ923571 brain, neuroblastoma, cell line .c 76 to 928 1 to 863       863/886
(97 %)
8 diff
(99.1 %id)
AL533277 adult brain, brain .c 77 to 1128 1 to 1035       1035/1071
(96 %)
25 diff
(97.7 %id)
BU854842 ovary, teratocarcinoma, cell line .c 77 to 971 1 to 903       903/909
(99 %)
13 diff
(98.6 %id)
AL560321.
matches multiple genes
B cells (Ramos cell line), B cells from Burkitt lymphoma .c 78 to 951 1 to 873     also hits gene LOC389053, LOC389322 873/873
(100 %)
5 diff
(99.5 %id)
DA466236   .c 79 to 646 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA134776 alzheimer cortex .c 80 to 641 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA393511 thalamus .c 80 to 660 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA819927   .c 80 to 644 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA840473 placenta .c 80 to 630 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA869948 Prostate .c 80 to 605 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB127443 thymus .c 80 to 591 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
AL542569 placenta .c 81 to 1059 1 to 971   fully sequenced,   971/971
(100 %)
4 diff
(99.6 %id)
AL514442.
matches multiple genes
neuroblastoma, placenta .c 83 to 1155 1 to 1062     also hits gene LOC389053 1062/1065
(99 %)
20 diff
(98.2 %id)
BE300406 muscle, rhabdomyosarcoma .c 83 to 928 31 to 870       844/877
(96 %)
33 diff
(96.3 %id)
DA042101 bladder .c 85 to 591 2 to 508   capped   507/507
(100 %)
0 diff
(100 %id)
DR155909 human embryonic stem cells differentiated toan early endodermal cell type .c 88 to 864 1 to 777       777/777
(100 %)
0 diff
(100 %id)
BQ069212 brain, neuroblastoma, cell line .c 97 to 1077 1 to 988       988/1031
(95 %)
16 diff
(98.5 %id)
BQ898752 brain, neuroblastoma, cell line .c 97 to 986 1 to 893       893/895
(99 %)
7 diff
(99.3 %id)
BC000355 Muscle, rhabdomyosarcoma .c 102 to 2115 1 to 2014 exact tiling clone, available from MGC, AAA   2014/2014
(100 %)
0 diff
(100 %id)
CN264583 embryonic stem cells, DMSO-treated H9 cellline .c 102 to 878 1 to 777       777/777
(100 %)
0 diff
(100 %id)
BQ214857 melanotic melanoma, skin .c 103 to 993 1 to 901       901/905
(99 %)
11 diff
(98.8 %id)
BU193879 melanotic melanoma, skin .c 103 to 950 1 to 852       852/853
(99 %)
5 diff
(99.5 %id)
DR157527 human embryonic stem cells differentiated toan early endodermal cell type .c 106 to 865 1 to 760       760/760
(100 %)
0 diff
(100 %id)
BE298163 muscle, rhabdomyosarcoma .c 107 to 667 1 to 561       561/561
(100 %)
0 diff
(100 %id)
AL569495 placenta .c 1029 to 1827 823 to 39   fully sequenced,   785/823
(95 %)
23 diff
(97.3 %id)
BX414064 B cells (Ramos cell line) .c 1231 to 2114 880 to 1       880/908
(96 %)
13 diff
(98.6 %id)
BJ995997 hepatoblastoma .c 1394 to 1849 456 to 1       456/456
(100 %)
0 diff
(100 %id)
AU147409 mammary gland .c 1583 to 2115 534 to 1       534/544
(98 %)
10 diff
(98.2 %id)
AU159777   .c 1583 to 2115 529 to 1       529/554
(95 %)
11 diff
(98.1 %id)
BE300084 muscle, rhabdomyosarcoma .c 1595 to 2059 470 to 1       470/999
(47 %)
13 diff
(98.7 %id)
DB294836   .c 1657 to 2115 460 to 1       460/505
(91 %)
4 diff
(99.3 %id)
AU157125 placenta .c 1718 to 2115 398 to 1       398/399
(99 %)
7 diff
(98.3 %id)
DB321983   .c 1729 to 2115 392 to 1       392/394
(99 %)
12 diff
(97.0 %id)
BJ991473 hepatoblastoma .c 2186 to 2719 534 to 1   tiling clone,   534/540
(98 %)
0 diff
(100 %id)
AU149547   .c 2285 to 2848 560 to 1   tiling clone,   560/560
(100 %)
12 diff
(97.9 %id)
AL560123 B cells (Ramos cell line), B cells from Burkitt lymphoma .d 1 to 950 5 to 943   fully sequenced,   943/943
(100 %)
3 diff
(99.7 %id)
BC025321.
matches multiple genes
brain, Brain, neuroblastoma, neuroblastoma, cell line .d 1 to 1977 1 to 1978 exact tiling clone, available from MGC, AAA also hits gene CHD7 1978/1978
(100 %)
1 diff
(100.0 %id)
AL581626 B cells (Ramos cell line), B cells from Burkitt lymphoma .d 920 to 1956 1042 to 4   tiling clone, fully sequenced,   1039/1042
(99 %)
1 diff
(100.0 %id)
CR592028 fetal liver .e 1 to 2027 1 to 2027 exact tiling clone,   2027/2027
(100 %)
0 diff
(100 %id)
BQ631698 Pancreas, Purified pancreatic islet .e 9 to 624 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BJ990091 hepatoblastoma .e 10 to 592 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC419525 uterus, tumor tissue .e 20 to 415 1 to 396       396/396
(100 %)
1 diff
(99.8 %id)
BG723441 testis .e 33 to 613 1 to 582       582/582
(100 %)
8 diff
(98.7 %id)
AI572805 Kidney .e 42 to 231 203 to 14       190/203
(93 %)
0 diff
(100 %id)
CR625621 B cells (Ramos cell line) .e 913 to 2040 1 to 1128       1128/1128
(100 %)
0 diff
(100 %id)
TI_149314015   .e 1221 to 2060 923 to 90   AAA   834/991
(84 %)
19 diff
(98.1 %id)
BQ631999 Pancreas, Purified pancreatic islet .e 1432 to 2061 632 to 3   tiling clone,   630/632
(99 %)
0 diff
(100 %id)
DA037366   .f 1 to 852 8 to 858   tiling clone, capped   857/857
(100 %)
12 diff
(98.6 %id)
CR590155 T cells (Jurkat cell line) .f 3 to 1955 1 to 1953 exact     1953/1953
(100 %)
0 diff
(100 %id)
CR608448 adult brain .f 10 to 2011 1 to 2002 exact tiling clone,   2002/2002
(100 %)
0 diff
(100 %id)
DB353269   .f 1489 to 2045 557 to 1   tiling clone,   557/557
(100 %)
6 diff
(99.0 %id)
DC428989   .g 1 to 590 1 to 590   tiling clone,   590/590
(100 %)
1 diff
(99.9 %id)
NM_031262.2   .g 129 to 3045 1 to 2917 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2917/2917
(100 %)
0 diff
(100 %id)
DC407458 thymus .g 129 to 704 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC328337 corpus callosum .g 131 to 703 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC405850 thymus .g 149 to 716 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC409753 thymus .g 149 to 717 1 to 569       569/577
(98 %)
0 diff
(100 %id)
DC315454 amygdala .g 152 to 711 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC371392   .g 152 to 719 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC303288 cerebellum .g 153 to 720 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC313768 amygdala .g 153 to 727 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC329017 corpus callosum .g 153 to 716 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC329861 hippocampus .g 153 to 711 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC340366 thalamus .g 153 to 718 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC341646 thalamus .g 153 to 741 1 to 589       589/589
(100 %)
0 diff
(100 %id)
DC352963 brain .g 153 to 712 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC362371 Kidney .g 153 to 713 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC428406   .g 153 to 725 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC380124 placenta .g 153 to 713 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC389745 Spleen .g 153 to 716 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC391304 Spleen .g 153 to 729 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC394636 testis .g 153 to 711 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC407277 thymus .g 153 to 715 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC411703 kidney, tumor tissue .g 153 to 715 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC327946 caudate nucleus .g 156 to 730 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC329876 hippocampus .g 156 to 716 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC337394 substantia nigra .g 156 to 714 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC406502 thymus .g 156 to 718 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC414796 trachea .g 156 to 742 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DC327164 caudate nucleus .g 157 to 716 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC327908 caudate nucleus .g 157 to 723 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC429182   .g 157 to 731 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC413220 liver, tumor tissue .g 157 to 726 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC371311   .g 160 to 728 1 to 569       569/569
(100 %)
0 diff
(100 %id)
BX420378 brain, fetal brain .g 161 to 1073 1 to 913       913/913
(100 %)
2 diff
(99.8 %id)
BU189545 melanotic melanoma, skin .g 167 to 995 1 to 839       839/875
(95 %)
15 diff
(98.3 %id)
BQ224290 large cell carcinoma, lung .g 168 to 1017 1 to 854       854/863
(98 %)
4 diff
(99.6 %id)
BQ056714 lymph, lymphoma, cell line .g 169 to 1121 1 to 957       957/962
(99 %)
20 diff
(98.0 %id)
DC371276   .g 170 to 733 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC328409 corpus callosum .g 171 to 731 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DA586414 lung .g 171 to 774 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DB154096 thymus .g 171 to 755 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DC413528 lung, tumor tissue .g 171 to 747 1 to 577       577/577
(100 %)
0 diff
(100 %id)
CT000807 T-Lymphocytes .g 174 to 1008 1 to 841       841/841
(100 %)
7 diff
(99.2 %id)
CT002789 T-Lymphocytes .g 174 to 984 1 to 812       812/818
(99 %)
4 diff
(99.6 %id)
DC406354 thymus .g 174 to 737 8 to 571       564/564
(100 %)
0 diff
(100 %id)
CX164709 human embryonic stem cells differentiated toan early endodermal cell type .g 176 to 957 1 to 782       782/782
(100 %)
0 diff
(100 %id)
DR159271 human embryonic stem cells differentiated toan early endodermal cell type .g 176 to 959 1 to 784       784/784
(100 %)
0 diff
(100 %id)
CR976272 T-Lymphocytes .g 177 to 824 1 to 648       648/648
(100 %)
0 diff
(100 %id)
DA748448   .g 178 to 739 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB260202 uterus .g 178 to 747 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BG252895 adenocarcinoma, cell line, Liver .g 182 to 912 1 to 731       731/739
(98 %)
8 diff
(99.0 %id)
BU145950 dorsal root ganglia .g 182 to 1106 1 to 926       924/940
(98 %)
27 diff
(97.2 %id)
BQ944863 carcinoma, cell line, Prostate .g 182 to 1034 1 to 862       862/937
(91 %)
13 diff
(98.7 %id)
DR157573 human embryonic stem cells differentiated toan early endodermal cell type .g 183 to 935 1 to 753       753/753
(100 %)
0 diff
(100 %id)
BJ989829 hepatoblastoma .g 184 to 768 1 to 585       585/585
(100 %)
0 diff
(100 %id)
AU280151   .g 184 to 756 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DA052530   .g 185 to 771 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA452283 tongue, tumor tissue .g 185 to 778 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA465678   .g 185 to 759 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA487544 brain .g 185 to 753 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA655545   .g 185 to 760 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA695928   .g 185 to 753 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA707156   .g 185 to 745 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA884372   .g 185 to 755 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA929589 small intestine .g 185 to 747 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB120633 thymus .g 185 to 758 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB122369 thymus .g 185 to 755 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB124066 thymus .g 185 to 766 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB196980 trachea .g 185 to 752 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BQ213357 embryonal carcinoma, cell line, testis .g 186 to 903 1 to 726       726/892
(81 %)
24 diff
(97.4 %id)
BE731420 choriocarcinoma, placenta .g 189 to 1009 1 to 821       821/868
(94 %)
18 diff
(98.0 %id)
DA424377   .g 190 to 749 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
CR974919 T-Lymphocytes .g 190 to 942 1 to 754       754/754
(100 %)
1 diff
(99.9 %id)
BC014980 Muscle, rhabdomyosarcoma .g 195 to 2219 1 to 2025 exact tiling clone, available from MGC, AAA   2025/2025
(100 %)
2 diff
(100.0 %id)
CB215505 normal endometrium, late proliferativephase, cycle day 13, uterus .g 197 to 847 1 to 651       651/651
(100 %)
0 diff
(100 %id)
BM550783 melanotic melanoma, skin .g 198 to 1230 1 to 1042       1042/1094
(95 %)
31 diff
(97.2 %id)
CX873681 embryonic stem .g 198 to 1040 1 to 843       843/843
(100 %)
0 diff
(100 %id)
DA377462 thalamus .g 203 to 781 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BQ214283 embryonal carcinoma, cell line, testis .g 204 to 1054 1 to 854       852/855
(99 %)
3 diff
(99.7 %id)
DA895557 skeletal muscle .g 205 to 772 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB123751 thymus .g 205 to 818 2 to 615   capped   614/614
(100 %)
0 diff
(100 %id)
DA015549 adrenal gland .g 212 to 777 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA493547 brain .g 212 to 784 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA652794   .g 212 to 789 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA747435   .g 212 to 770 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB109306 thymus .g 212 to 785 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB128293 thymus .g 212 to 792 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
CN264506 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 215 to 779 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BQ643226 lymph, lymphoma, cell line .g 216 to 1117 1 to 907       907/908
(99 %)
9 diff
(99.1 %id)
DA507984 brain .g 222 to 799 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA293290 hippocampus .g 223 to 789 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BM561200 amelanotic melanoma, cell line, skin .g 228 to 1223 1 to 1008       1008/1092
(92 %)
34 diff
(96.9 %id)
CN264541 embryonic stem cells, cell lines H1, H7, andH9 .g 231 to 851 1 to 621       621/621
(100 %)
0 diff
(100 %id)
DB112639 thymus .g 263 to 843 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
S74678   .g 281 to 2583 1 to 2302 exact     2302/2302
(100 %)
2 diff
(100.0 %id)
AA227246 brain, neuroepithelial cells .g 300 to 566 1 to 267       267/267
(100 %)
1 diff
(99.7 %id)
CN264490 embryonic stem cells, DMSO-treated H9 cellline .g 328 to 1097 1 to 770       770/770
(100 %)
1 diff
(99.9 %id)
DB267525 uterus .g 351 to 938 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA387644 thalamus .g 355 to 933 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BG678194 skin, squamous cell carcinoma .g 372 to 1260 1 to 887       887/975
(90 %)
25 diff
(97.5 %id)
DA023492   .g 384 to 949 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA934006 Spleen .g 397 to 977 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
BM837345 Ascites, stomach .g 449 to 1041 1 to 593       593/593
(100 %)
0 diff
(100 %id)
CB111932 Liver .g 484 to 1041 1 to 558       558/558
(100 %)
0 diff
(100 %id)
AU125490   .g 485 to 1159 2 to 677   capped   676/683
(98 %)
3 diff
(99.6 %id)
BM456408 lymph, lymphoma, cell line .g 538 to 1341 1 to 814       814/820
(99 %)
20 diff
(97.6 %id)
AW178009 head_neck .g 547 to 1243 697 to 1       697/697
(100 %)
4 diff
(99.5 %id)
DA131220 alzheimer cortex .g 550 to 1107 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
CD722158 eye, lacrimal gland .g 550 to 1127 7 to 584       578/584
(98 %)
0 diff
(100 %id)
BM744389 Ascites, stomach .g 558 to 1141 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BM462292 eye, retinoblastoma .g 563 to 1224 1 to 661       661/1104
(59 %)
14 diff
(98.8 %id)
DA030927   .g 584 to 1153 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CX164342 human embryonic stem cells differentiated toan early endodermal cell type .g 587 to 1361 1 to 775       775/775
(100 %)
0 diff
(100 %id)
CT004165 T-Lymphocytes .g 619 to 1434 1 to 816       816/816
(100 %)
0 diff
(100 %id)
DA259334 caudate nucleus .g 625 to 1189 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
CB216776 normal endometrium, mid-secretory phase,cycle day 23, uterus .g 669 to 1272 1 to 604       604/604
(100 %)
0 diff
(100 %id)
BU167420 melanotic melanoma, skin .g 672 to 1483 1 to 814       814/851
(95 %)
14 diff
(98.4 %id)
DR763254 embryonic stem .g 685 to 1420 1 to 736       736/736
(100 %)
0 diff
(100 %id)
DA690249   .g 698 to 1270 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AU123998   .g 714 to 1450 2 to 738   capped   737/737
(100 %)
2 diff
(99.8 %id)
CX786464 human embryonic stem cells .g 724 to 1423 1 to 700       700/700
(100 %)
0 diff
(100 %id)
CN264485 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 737 to 1419 1 to 683       683/683
(100 %)
0 diff
(100 %id)
EB388080 eye, optic nerve .g 747 to 1633 1 to 887       887/887
(100 %)
1 diff
(99.9 %id)
BU162148 melanotic melanoma, skin .g 749 to 1578 1 to 833       833/916
(90 %)
10 diff
(99.0 %id)
CX759422 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .g 773 to 1547 1 to 775     Submitted on the opposite strand 775/783
(98 %)
10 diff
(98.8 %id)
CT001122 T-Lymphocytes .g 859 to 1695 1 to 839       839/856
(98 %)
7 diff
(99.2 %id)
AU123933   .g 893 to 1575 2 to 685   capped   684/686
(99 %)
3 diff
(99.6 %id)
BM842881 lymph node, stomach .g 895 to 1507 1 to 613       613/613
(100 %)
0 diff
(100 %id)
CR996071 T-Lymphocytes .g 901 to 1837 1 to 939       939/939
(100 %)
7 diff
(99.3 %id)
AU123657   .g 913 to 1747 2 to 842   capped   841/853
(98 %)
13 diff
(98.5 %id)
CX786480 human embryonic stem cells .g 943 to 1697 1 to 755       755/755
(100 %)
0 diff
(100 %id)
BQ434962 melanotic melanoma, skin .g 1003 to 1866 1 to 878       878/888
(98 %)
24 diff
(97.3 %id)
CX786515 human embryonic stem cells .g 1009 to 1751 1 to 743       743/743
(100 %)
0 diff
(100 %id)
DA932895 Spleen .g 1073 to 1635 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BU175656 embryonal carcinoma, cell line, testis .g 1108 to 1948 1 to 844       844/918
(91 %)
21 diff
(97.8 %id)
BE275142 melanotic melanoma, skin .g 1119 to 1860 1 to 742       742/829
(89 %)
12 diff
(98.6 %id)
BU165330 eye, retinoblastoma .g 1168 to 1952 1 to 784       784/933
(84 %)
7 diff
(99.3 %id)
CD514081 brain, Pituitary .g 1467 to 2243 1 to 787       787/911
(86 %)
18 diff
(98.1 %id)
BM691676 eye, RPE and Choroid .g 1470 to 1901 8 to 439   fully sequenced,   432/439
(98 %)
1 diff
(99.8 %id)
TI_149276411   .g 1480 to 2219 832 to 93   AAA   740/855
(86 %)
2 diff
(99.8 %id)
CB529032 Aveolar Macrophage, lung .g 1515 to 2219 724 to 19   AAA   706/706
(100 %)
1 diff
(99.9 %id)
CR975644 T-Lymphocytes .g 1528 to 2218 1 to 692       692/738
(93 %)
2 diff
(99.8 %id)
BQ876694 sympathetic trunk .g 1530 to 2219 1 to 689       689/689
(100 %)
1 diff
(99.9 %id)
BU677219 lung, Primary Lung Epithelial Cells .g 1544 to 2219 694 to 19   AAA   676/676
(100 %)
0 diff
(100 %id)
BM802799 embryonal carcinoma, cell line, testis .g 1546 to 2387 1 to 845   AAA   845/1139
(74 %)
13 diff
(98.9 %id)
BM272179 Pancreas, Purified pancreatic islet .g 1585 to 2218 634 to 1       634/634
(100 %)
0 diff
(100 %id)
BU628577 Bone, Enchondroma cell line .g 1590 to 2219 647 to 19   AAA   629/629
(100 %)
1 diff
(99.9 %id)
F07829 brain, total brain .g 1591 to 1898 1 to 308       308/308
(100 %)
0 diff
(100 %id)
CN264573 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 1597 to 2219 1 to 624   AAA   624/624
(100 %)
1 diff
(99.9 %id)
BM978717 lung, Primary Lung Epithelial Cells .g 1652 to 2219 586 to 19   AAA   568/576
(98 %)
0 diff
(100 %id)
BU781876 insulinoma, Pancreas .g 1685 to 1985 1 to 301       301/301
(100 %)
0 diff
(100 %id)
BM550391 melanotic melanoma, skin .g 1709 to 2708 1 to 1012       1012/1097
(92 %)
24 diff
(97.9 %id)
AA151443   .g 1747 to 2220 485 to 3       483/513
(94 %)
0 diff
(100 %id)
AA226958 brain, neuroepithelial cells .g 1840 to 2219 390 to 11   AAA   380/380
(100 %)
0 diff
(100 %id)
BM662300 eye, RPE and Choroid .g 1871 to 2219 366 to 18   fully sequenced, AAA   349/349
(100 %)
0 diff
(100 %id)
F04083 brain, total brain .g 1900 to 2221 322 to 1       322/322
(100 %)
1 diff
(99.7 %id)
TI_149305613   .g 1918 to 2842 998 to 83   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 916/1015
(90 %)
20 diff
(98.1 %id)
BC013220 Brain, glioblastoma with EGFR amplification .g 1964 to 2842 1 to 879   available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 879/879
(100 %)
0 diff
(100 %id)
BM697800 eye, fetal eyes .g 1971 to 2545 1 to 576   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 576/576
(100 %)
5 diff
(99.2 %id)
CX784015 human embryonic stem cells .g 1974 to 2659 1 to 686       686/686
(100 %)
0 diff
(100 %id)
BM720823 eye, fetal eye .g 1984 to 2492 1 to 508   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 508/508
(100 %)
0 diff
(100 %id)
TI_149283671   .g 1994 to 2950 1011 to 63   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 949/1169
(81 %)
41 diff
(96.5 %id)
BF940457 fibrotheoma, ovary .g 2004 to 2372 1 to 369   AAA Submitted on the opposite strand 369/369
(100 %)
0 diff
(100 %id)
TI_149310602   .g 2008 to 2842 917 to 89   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 829/958
(86 %)
7 diff
(99.3 %id)
TI_149298804   .g 2024 to 2858 922 to 94   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 829/956
(86 %)
10 diff
(99.0 %id)
BU688883 lung .g 2074 to 2842 787 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 769/769
(100 %)
0 diff
(100 %id)
BM975493 lung, Primary Lung Cystic Fibrosis EpithelialCells .g 2108 to 2860 752 to 1   tiling clone,   752/752
(100 %)
1 diff
(99.9 %id)
BM985041 lung .g 2116 to 2842 745 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 727/727
(100 %)
0 diff
(100 %id)
BU685939 lung, Primary Lung Epithelial Cells .g 2136 to 2842 725 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 707/707
(100 %)
0 diff
(100 %id)
CA446451 Chondrosarcoma, Left Pubic Bone .g 2159 to 2842 702 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 684/684
(100 %)
2 diff
(99.8 %id)
BU681935 lung .g 2162 to 2842 699 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 681/681
(100 %)
2 diff
(99.8 %id)
CB139012 Liver .g 2166 to 2723 1 to 558       558/558
(100 %)
0 diff
(100 %id)
CB138636 Liver .g 2166 to 2723 1 to 558       558/558
(100 %)
0 diff
(100 %id)
CA431869 Alveolar Macrophage, lung .g 2170 to 2952 786 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 770/789
(97 %)
11 diff
(98.7 %id)
BU782791 insulinoma, Pancreas .g 2218 to 2824 608 to 1       608/608
(100 %)
1 diff
(99.9 %id)
BQ774776 Bone, Human Chondrosarcoma Cell Line .g 2218 to 2860 643 to 1       643/643
(100 %)
1 diff
(99.9 %id)
TI_149308250   .g 2221 to 2842 720 to 99   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 622/952
(65 %)
1 diff
(99.9 %id)
BU687108 lung, Primary Lung Epithelial Cells .g 2221 to 2842 640 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 622/638
(97 %)
1 diff
(99.9 %id)
AA069773.
matches multiple genes
pineal gland .g 2237 to 2843 605 to 1     also hits gene LOC644063 605/639
(94 %)
10 diff
(98.5 %id)
DA274059 corpus callosum .g 2240 to 2803 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BU730437 eye, RPE and Choroid .g 2241 to 2842 620 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 602/612
(98 %)
0 diff
(100 %id)
AA236042 germinal center B cell .g 2243 to 2580 1 to 338   fully sequenced,   338/338
(100 %)
1 diff
(99.8 %id)
AA250884 germinal center B cell .g 2243 to 2603 1 to 361   fully sequenced,   361/361
(100 %)
1 diff
(99.8 %id)
AU132911   .g 2247 to 2842 2 to 597   fully sequenced, capped   596/596
(100 %)
0 diff
(100 %id)
BM970339 lung .g 2258 to 2842 603 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 585/593
(98 %)
0 diff
(100 %id)
BF034575 adenocarcinoma, ovary .g 2270 to 2837 1 to 568       568/568
(100 %)
0 diff
(100 %id)
CA420340 Bone, Enchondroma cell line .g 2270 to 2950 699 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 681/681
(100 %)
0 diff
(100 %id)
CA306728 Alveolar Macrophage, lung .g 2271 to 2952 698 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 682/682
(100 %)
0 diff
(100 %id)
CD677567 eye, Trabecular meshwork .g 2287 to 2949 1 to 663       663/663
(100 %)
0 diff
(100 %id)
AL134405 brain .g 2326 to 2939 1 to 614       614/614
(100 %)
0 diff
(100 %id)
AI889492 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .g 2327 to 2952 628 to 1       628/628
(100 %)
2 diff
(99.7 %id)
BU680282 lung, Primary Lung Epithelial Cells .g 2353 to 2950 616 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 598/598
(100 %)
0 diff
(100 %id)
AU149140   .g 2367 to 2858 492 to 1       492/492
(100 %)
0 diff
(100 %id)
AA554692 breast .g 2392 to 3046 655 to 3   tiling clone,   653/655
(99 %)
0 diff
(100 %id)
BQ269666 Pancreas, Purified pancreatic islet .g 2439 to 3045 607 to 1       607/607
(100 %)
0 diff
(100 %id)
BM676930 eye, fetal eye .g 2462 to 2952 507 to 17   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 491/491
(100 %)
0 diff
(100 %id)
BU736090 eye, fetal eyes .g 2515 to 3045 549 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 531/531
(100 %)
0 diff
(100 %id)
AA236043 germinal center B cell .g 2550 to 2843 296 to 1   fully sequenced,   296/296
(100 %)
0 diff
(100 %id)
AA250827 germinal center B cell .g 2573 to 2843 267 to 1   fully sequenced,   267/267
(100 %)
0 diff
(100 %id)
AU154349   .g 2605 to 2842 237 to 1   fully sequenced,   237/237
(100 %)
0 diff
(100 %id)
CB128658 Liver .g 2870 to 3507 1 to 638   tiling clone,   638/638
(100 %)
1 diff
(99.9 %id)
AU142839   .h 1 to 865 9 to 879   capped   878/878
(100 %)
18 diff
(98.0 %id)
CR621069 B cells (Ramos cell line) .h 1 to 1956 5 to 1960 exact tiling clone,   1960/1960
(100 %)
0 diff
(100 %id)
CR608126 B cells (Ramos cell line) .h 614 to 1949 1 to 1336       1336/1336
(100 %)
0 diff
(100 %id)
TI_149306131   .h 1160 to 1974 901 to 88   AAA   811/959
(84 %)
11 diff
(98.9 %id)
AU160037   .h 1418 to 1974 554 to 1   tiling clone,   554/563
(98 %)
9 diff
(98.5 %id)
DA997149   .i 1 to 562 2 to 563   capped   562/562
(100 %)
6 diff
(99.0 %id)
DA786238 brain .i 2 to 594 2 to 596   tiling clone, capped   595/595
(100 %)
4 diff
(99.4 %id)
DA491797 brain .i 3 to 506 2 to 505   capped   504/504
(100 %)
2 diff
(99.7 %id)
DA164998 amygdala .i 4 to 579 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA483290 brain .i 4 to 908 2 to 915   tiling clone, capped   914/915
(99 %)
17 diff
(98.2 %id)
DA550961   .i 4 to 882 2 to 882   tiling clone, capped   881/881
(100 %)
17 diff
(98.1 %id)
DA598787   .i 4 to 552 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DA708114   .i 4 to 550 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA839116 placenta .i 4 to 560 2 to 559   capped   558/558
(100 %)
4 diff
(99.3 %id)
DB183246 liver, tumor tissue .i 4 to 578 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DB272555 uterus .i 4 to 552 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DA129291 alzheimer cortex .i 5 to 550 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA476639   .i 5 to 571 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA667170   .i 5 to 550 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA708045   .i 5 to 555 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB127645 thymus .i 5 to 533 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA000429   .i 9 to 517 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
DA029850   .i 9 to 585 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DA667123   .i 9 to 574 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA743464   .i 9 to 569 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB106939 thymus .i 9 to 575 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB120998 thymus .i 9 to 574 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB173323 kidney, tumor tissue .i 10 to 579 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB257093 uterus .i 10 to 588 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
CN264569 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .i 13 to 645 1 to 633       633/633
(100 %)
8 diff
(98.8 %id)
BQ232146 melanotic melanoma, skin .i 880 to 1617 1 to 743   tiling clone,   743/878
(84 %)
11 diff
(98.8 %id)
BE769485 prostate_tumor .i 1128 to 1468 352 to 13       340/352
(96 %)
0 diff
(100 %id)
BG720010 testis .j -9 to 675 1 to 688       688/688
(100 %)
6 diff
(99.2 %id)
BI464346 testis .j -9 to 821 1 to 829       829/829
(100 %)
21 diff
(97.5 %id)
DC395470 testis .j 1 to 565 2 to 566   tiling clone,   566/566
(100 %)
0 diff
(100 %id)
DC316131 amygdala .j 3 to 566 1 to 564       564/564
(100 %)
0 diff
(100 %id)
BG115465 duodenal adenocarcinoma, cell line, small intestine .j 10 to 779 1 to 771       773/907
(85 %)
31 diff
(96.6 %id)
DC350449 brain .j 13 to 586 1 to 574       574/575
(99 %)
3 diff
(99.5 %id)
BM470496 eye, retinoblastoma .j 20 to 896 1 to 892       892/966
(92 %)
18 diff
(98.2 %id)
BM473980 eye, retinoblastoma .j 20 to 1019 1 to 1013       1013/1020
(99 %)
55 diff
(94.7 %id)
DC303778 cerebellum .j 23 to 585 1 to 563       563/563
(100 %)
2 diff
(99.7 %id)
DC341610 thalamus .j 25 to 613 1 to 590       590/590
(100 %)
6 diff
(99.0 %id)
DC350468 brain .j 25 to 595 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
DC376127 brain .j 25 to 644 1 to 620       620/620
(100 %)
2 diff
(99.7 %id)
DC405602 thymus .j 25 to 599 1 to 575       575/575
(100 %)
3 diff
(99.5 %id)
DC405349 thymus .j 26 to 602 1 to 577       577/577
(100 %)
3 diff
(99.5 %id)
DC350129 brain .j 27 to 605 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC340081 thalamus .j 28 to 601 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
DC359119 lung .j 28 to 588 1 to 562       562/562
(100 %)
4 diff
(99.3 %id)
DC361024   .j 28 to 604 1 to 578       578/578
(100 %)
2 diff
(99.7 %id)
DC361026   .j 28 to 598 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
DC368022   .j 28 to 580 1 to 554       554/554
(100 %)
4 diff
(99.3 %id)
DC371219   .j 28 to 597 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC300193   .j 29 to 606 1 to 578       578/578
(100 %)
3 diff
(99.5 %id)
DC313297 amygdala .j 29 to 600 1 to 573       573/574
(99 %)
2 diff
(99.7 %id)
DC315549 amygdala .j 29 to 591 1 to 564       564/564
(100 %)
3 diff
(99.5 %id)
DC319090 brain .j 29 to 584 1 to 556       556/556
(100 %)
2 diff
(99.7 %id)
DC337698 substantia nigra .j 29 to 607 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC296993   .j 29 to 598 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
DC354460 Kidney .j 29 to 589 1 to 562       562/562
(100 %)
5 diff
(99.2 %id)
DC363749   .j 29 to 565 1 to 537       537/537
(100 %)
1 diff
(99.9 %id)
DC367656   .j 29 to 603 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
DC371355   .j 29 to 591 1 to 563       563/564
(99 %)
3 diff
(99.5 %id)
DC371549   .j 29 to 543 1 to 516       516/516
(100 %)
3 diff
(99.5 %id)
DC371601   .j 29 to 610 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DC374162 brain .j 29 to 584 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
DC374631 brain .j 29 to 595 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC376016 brain .j 29 to 621 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
DC380593 placenta .j 29 to 579 1 to 552       552/552
(100 %)
2 diff
(99.7 %id)
DC411384 kidney, tumor tissue .j 29 to 575 1 to 547       547/547
(100 %)
2 diff
(99.7 %id)
DC414050 trachea .j 29 to 617 1 to 590       590/590
(100 %)
2 diff
(99.7 %id)
DC419295 stomach, tumor tissue .j 29 to 597 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
DC419636 uterus .j 29 to 599 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC420130 uterus .j 29 to 596 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
DC349150   .j 30 to 568 1 to 540       540/540
(100 %)
1 diff
(99.9 %id)
DC374916 brain .j 30 to 617 1 to 589       589/589
(100 %)
2 diff
(99.7 %id)
DC386165   .j 30 to 604 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
DC395773 testis .j 30 to 618 1 to 589       589/589
(100 %)
0 diff
(100 %id)
DC351366 brain .j 35 to 591 15 to 572       558/572
(97 %)
9 diff
(98.5 %id)
DC301869   .j 36 to 597 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC302288 cerebellum .j 36 to 580 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC312655 alzheimer cortex .j 36 to 592 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DC325650 caudate nucleus .j 36 to 599 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC351140 brain .j 36 to 590 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC353063 brain .j 36 to 591 1 to 557       557/557
(100 %)
4 diff
(99.3 %id)
DC358722 lung .j 36 to 578 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
DC361170   .j 36 to 608 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
DC384697   .j 36 to 562 1 to 528       528/528
(100 %)
2 diff
(99.7 %id)
DC393050 breast, tumor tissue .j 36 to 581 1 to 547       547/547
(100 %)
2 diff
(99.7 %id)
AB209562 brain .j 42 to 2749 1 to 2706 exact tiling clone,   2706/2706
(100 %)
3 diff
(99.9 %id)
DC375796 brain .j 45 to 628 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DC350241 brain .j 49 to 621 1 to 573       573/573
(100 %)
5 diff
(99.2 %id)
BQ876606 hepatocellular carcinoma, cell line, Liver .j 54 to 906 1 to 855       855/892
(95 %)
9 diff
(99.0 %id)
DC411539 kidney, tumor tissue .j 54 to 642 1 to 589       589/589
(100 %)
0 diff
(100 %id)
BX446752 neuroblastoma .j 58 to 1020 1 to 959       959/959
(100 %)
6 diff
(99.4 %id)
AL553294 placenta, Placenta Cot 25-normalized .j 62 to 1049 1 to 977   fully sequenced,   977/977
(100 %)
13 diff
(98.7 %id)
CN264524 embryonic stem cells, DMSO-treated H9 cellline .j 77 to 769 1 to 694       694/694
(100 %)
1 diff
(99.9 %id)
BM919522 pooled pancreas and spleen .j 101 to 978 1 to 880       880/988
(89 %)
18 diff
(98.2 %id)
CX164400 human embryonic stem cells differentiated toan early endodermal cell type .j 124 to 869 1 to 746       746/746
(100 %)
0 diff
(100 %id)
DC350477 brain .j 197 to 784 1 to 588       588/588
(100 %)
0 diff
(100 %id)
CN264478 embryonic stem cells, DMSO-treated H9 cellline .j 242 to 895 1 to 654       654/654
(100 %)
0 diff
(100 %id)
EB386624 eye, optic nerve .j 289 to 1100 1 to 812       812/812
(100 %)
0 diff
(100 %id)
DC366094   .j 344 to 889 1 to 546       546/546
(100 %)
0 diff
(100 %id)
AU127330   .j 392 to 985 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
AL576436 placenta, Placenta Cot 25-normalized .j 1019 to 1990 966 to 1   fully sequenced,   966/966
(100 %)
9 diff
(99.1 %id)
AU149946   .j 2238 to 2749 509 to 1       509/513
(99 %)
7 diff
(98.7 %id)
BG722542 testis .k 1 to 768 1 to 768       768/768
(100 %)
9 diff
(98.9 %id)
DC301780   .k 2 to 583 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC345661 tongue, tumor tissue .k 2 to 581 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC371214   .k 2 to 577 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC375110 brain .k 2 to 588 1 to 587   tiling clone,   587/587
(100 %)
0 diff
(100 %id)
DC397016 testis .k 2 to 572 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC405432 thymus .k 2 to 576 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC311771 alzheimer cortex .k 6 to 570 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
DC313790 amygdala .k 6 to 578 1 to 574       573/574
(99 %)
4 diff
(99.4 %id)
DC314484 amygdala .k 6 to 588 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DC362255 Kidney .k 9 to 604 1 to 596       596/596
(100 %)
0 diff
(100 %id)
DC364990 esophagus .k 9 to 579 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
BI464935 testis .k 12 to 803 1 to 794       794/794
(100 %)
23 diff
(97.2 %id)
DC304441 cerebellum .k 13 to 589 1 to 577       577/577
(100 %)
0 diff
(100 %id)
BJ989419 hepatoblastoma .k 17 to 606 11 to 600       590/600
(98 %)
11 diff
(98.2 %id)
AU127823   .k 17 to 618 2 to 603   capped   602/613
(98 %)
6 diff
(99.1 %id)
AU128286   .k 17 to 563 2 to 549   capped   548/563
(97 %)
3 diff
(99.5 %id)
DC349946 brain .k 18 to 608 1 to 591       591/591
(100 %)
1 diff
(99.9 %id)
DC354106 brain .k 18 to 581 1 to 564       564/564
(100 %)
3 diff
(99.5 %id)
DC350799 brain .k 19 to 599 1 to 581       581/582
(99 %)
3 diff
(99.5 %id)
DC353007 brain .k 19 to 584 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
DC374543 brain .k 19 to 593 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC385815 skeletal muscle .k 19 to 578 1 to 560       560/560
(100 %)
4 diff
(99.3 %id)
DC397001 testis .k 19 to 592 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC352049 brain .k 20 to 598 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC371444   .k 20 to 595 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC394926 testis .k 20 to 582 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
DC419262 stomach, tumor tissue .k 20 to 577 1 to 559       559/559
(100 %)
3 diff
(99.5 %id)
DC328019 corpus callosum .k 21 to 589 1 to 569       569/569
(100 %)
0 diff
(100 %id)
BU191706 eye, retinoblastoma .k 23 to 675 12 to 665       654/934
(70 %)
16 diff
(98.3 %id)
DC384080 Prostate .k 23 to 585 8 to 570       563/563
(100 %)
0 diff
(100 %id)
DC421372 uterus .k 23 to 591 9 to 577       569/569
(100 %)
0 diff
(100 %id)
AL560218 B cells (Ramos cell line), B cells from Burkitt lymphoma .k 25 to 1014 1 to 983   fully sequenced,   983/983
(100 %)
14 diff
(98.6 %id)
BG828236 muscle, rhabdomyosarcoma .k 26 to 689 1 to 666       666/703
(94 %)
27 diff
(96.2 %id)
BG709066 brain, hypothalamus .k 28 to 783 1 to 756       756/760
(99 %)
12 diff
(98.5 %id)
DN601570 human embryonic stem cells .k 28 to 869 1 to 842   tiling clone,   842/842
(100 %)
0 diff
(100 %id)
DA709382   .k 28 to 595 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DC383720 Prostate .k 28 to 612 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
DA704741   .k 29 to 571 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA779370 brain .k 29 to 597 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DC298953 adrenal gland .k 33 to 604 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC297044   .k 33 to 600 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC350191 brain .k 33 to 598 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC353343 brain .k 33 to 606 1 to 574       574/574
(100 %)
3 diff
(99.5 %id)
CT002725 T-Lymphocytes .k 33 to 668 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
DC388317 small intestine .k 33 to 614 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DC392694 breast, tumor tissue .k 33 to 603 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC414005 trachea .k 33 to 612 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA299156 hippocampus .k 34 to 592 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA501017 brain .k 34 to 593 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA533351 brain .k 34 to 595 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA655787   .k 34 to 592 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DA718815   .k 34 to 596 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA744723   .k 34 to 580 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA746449   .k 37 to 597 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DC366144   .k 38 to 605 1 to 568       568/568
(100 %)
2 diff
(99.7 %id)
DC299673   .k 45 to 614 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
DC350034 brain .k 45 to 610 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
BM480169 eye, retinoblastoma .k 46 to 1047 12 to 1020       1009/1084
(93 %)
28 diff
(97.5 %id)
BM452890 melanotic melanoma, skin .k 47 to 872 1 to 827       827/926
(89 %)
11 diff
(98.9 %id)
DC305885 cerebellum .k 48 to 604 1 to 558       558/558
(100 %)
2 diff
(99.7 %id)
DC363086   .k 48 to 864 1 to 816       816/818
(99 %)
5 diff
(99.4 %id)
DC371490   .k 48 to 610 1 to 564       564/564
(100 %)
4 diff
(99.3 %id)
DC380170 placenta .k 48 to 607 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC363706   .k 51 to 634 1 to 585       585/585
(100 %)
3 diff
(99.5 %id)
DC353800 brain .k 53 to 662 1 to 610       610/610
(100 %)
1 diff
(99.9 %id)
DA299392 hippocampus .k 54 to 597 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DC326313 caudate nucleus .k 55 to 618 1 to 565       565/566
(99 %)
3 diff
(99.5 %id)
DC351532 brain .k 59 to 632 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
DC378153   .k 60 to 617 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC354296 heart .k 63 to 647 1 to 585       585/585
(100 %)
3 diff
(99.5 %id)
BM450154 melanotic melanoma, skin .k 66 to 890 13 to 838       826/1050
(78 %)
13 diff
(98.8 %id)
DC350755 brain .k 70 to 650 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BE841970 stomach .k 89 to 680 31 to 621       591/623
(94 %)
17 diff
(97.3 %id)
BX437236 thymus .k 309 to 1070 10 to 771       765/771
(99 %)
8 diff
(99.0 %id)
AL520999 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .k 476 to 1271 10 to 804   tiling clone, fully sequenced,   795/804
(98 %)
7 diff
(99.2 %id)
AL581705 B cells (Ramos cell line), B cells from Burkitt lymphoma .k 984 to 1945 956 to 1   fully sequenced,   956/956
(100 %)
12 diff
(98.8 %id)
BX415368 thymus .k 1173 to 1965 795 to 1   tiling clone,   795/795
(100 %)
1 diff
(99.9 %id)
AL520998 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .k 1226 to 1971 747 to 1   tiling clone, fully sequenced,   747/747
(100 %)
4 diff
(99.5 %id)
AU150595   .k 2033 to 2619 579 to 1   tiling clone,   579/579
(100 %)
14 diff
(97.6 %id)
AU150257   .k 2075 to 2619 548 to 1   tiling clone,   548/550
(99 %)
17 diff
(97.0 %id)
AK300744   .l 1 to 1857 1 to 1858 exact tiling clone,   1858/1858
(100 %)
3 diff
(99.9 %id)
DC350917 brain .l 7 to 579 1 to 574       574/574
(100 %)
3 diff
(99.5 %id)
DC352866 brain .l 7 to 550 1 to 544       544/544
(100 %)
3 diff
(99.5 %id)
DC355570   .l 7 to 536 1 to 530       530/530
(100 %)
3 diff
(99.5 %id)
DC387095   .l 7 to 567 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
DC415192 trachea .l 7 to 557 1 to 551       551/551
(100 %)
2 diff
(99.7 %id)
DC329935 hippocampus .l 9 to 586 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DC360402   .l 9 to 640 1 to 631   tiling clone,   631/631
(100 %)
1 diff
(99.9 %id)
DC331694 hippocampus .l 10 to 593 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DC303386 cerebellum .l 11 to 555 1 to 545       545/545
(100 %)
2 diff
(99.7 %id)
DC350101 brain .l 11 to 590 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DC379243 pericardium .l 11 to 589 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DC297849   .l 14 to 572 1 to 560       560/560
(100 %)
4 diff
(99.3 %id)
DC340953 thalamus .l 17 to 577 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BQ271845 Pancreas, Purified pancreatic islet .l 41 to 490 1 to 450       450/450
(100 %)
2 diff
(99.6 %id)
BQ271540 Pancreas, Purified pancreatic islet .l 1486 to 1930 445 to 1   tiling clone,   445/445
(100 %)
0 diff
(100 %id)
BQ072091 brain, neuroblastoma, cell line .m 1 to 986 1 to 999   tiling clone,   999/1042
(95 %)
44 diff
(95.8 %id)
CR622928 B cells (Ramos cell line) .m 7 to 1923 1 to 1917 exact tiling clone,   1917/1917
(100 %)
0 diff
(100 %id)
CB988881 Human Placenta, placenta .m 10 to 661 28 to 680       653/838
(77 %)
12 diff
(98.6 %id)
CR595399 Neuroblastoma Cot 10-normalized .m 474 to 1949 1 to 1476   tiling clone,   1476/1476
(100 %)
0 diff
(100 %id)
BQ879468 melanotic melanoma, cell line, skin .m 568 to 1332 1 to 777       772/903
(85 %)
21 diff
(97.7 %id)
BE779491 eye, retinoblastoma .m 609 to 1333 1 to 716       715/885
(80 %)
28 diff
(96.9 %id)
CX760242 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .m 801 to 1502 1 to 705     Submitted on the opposite strand 702/705
(99 %)
53 diff
(92.5 %id)
AW750439 breast .m 975 to 1311 348 to 1       344/348
(98 %)
34 diff
(90.3 %id)
BF327523 breast_normal .m 1098 to 1395 36 to 342       306/352
(86 %)
24 diff
(93.2 %id)
DA330154 hippocampus .n 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DA110223 cerebellum .n 5 to 569 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA216927 brain .n 5 to 529 2 to 527   capped   526/526
(100 %)
4 diff
(99.3 %id)
DA232917 brain .n 23 to 585 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA336999 hippocampus .n 23 to 598 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
AL532538 brain, fetal liver, Liver, neuroblastoma cells .n 27 to 938 1 to 911       911/911
(100 %)
6 diff
(99.4 %id)
DB441885 testis .n 35 to 469 1 to 435       435/435
(100 %)
0 diff
(100 %id)
DB144813 thymus .n 36 to 574 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
BG914199 anaplastic oligodendroglioma with 1p/19qloss, brain .n 126 to 832 25 to 753       735/829
(88 %)
35 diff
(95.8 %id)
AL589241 human spinal cord .n 392 to 758 25 to 390   tiling clone,   366/390
(93 %)
6 diff
(98.5 %id)
DB150987 thymus .n 578 to 1040 2 to 464   tiling clone, capped   463/463
(100 %)
0 diff
(100 %id)
DA436384 tongue, tumor tissue .n 721 to 1300 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
AW978905   .n 903 to 1540 637 to 1   tiling clone, Submitted on the opposite strand 637/641
(99 %)
3 diff
(99.6 %id)
BF526602 brain, glioblastoma with EGFR amplification .n 1060 to 1493 1 to 432       432/638
(67 %)
10 diff
(98.5 %id)
AA807257 germinal center B cell .n 1118 to 1547 433 to 4       430/433
(99 %)
0 diff
(100 %id)
AA952956 pooled .n 1152 to 1495 1 to 344     Submitted on the opposite strand 344/344
(100 %)
0 diff
(100 %id)
AA825879 germinal center B cell .n 1297 to 1547 253 to 4       250/253
(98 %)
0 diff
(100 %id)
DA016363 adrenal gland .n 1343 to 1903 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA221628 brain .n 1351 to 1891 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
CN358158 embryonic stem cells, cell lines H1, H7, andH9 .n 1472 to 2186 1 to 714   tiling clone,   714/714
(100 %)
2 diff
(99.8 %id)
DA401678 thalamus .n 1489 to 2035 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
BQ323202 colon_est .n 1530 to 1805 35 to 313       279/313
(89 %)
6 diff
(98.1 %id)
AK123117 cerebellum .n 1648 to 4431 1 to 2784   tiling clone, available from FLJ,   2784/2784
(100 %)
1 diff
(100.0 %id)
DA064665 cerebellum .n 1649 to 2205 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
CD244118 testis .n 1821 to 2654 1 to 834       834/834
(100 %)
0 diff
(100 %id)
DA194972 amygdala .n 1877 to 2422 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA955205 Spleen .n 1888 to 2458 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
EL594622 epidermis, skin .n 1965 to 2231 1 to 267       267/287
(93 %)
1 diff
(99.7 %id)
DA404720 thalamus .n 2058 to 2613 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BF911895 uterus_tumor .n 2073 to 2212 147 to 11     Submitted on the opposite strand 137/147
(93 %)
0 diff
(100 %id)
DB122287 thymus .n 2096 to 2670 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BX471015   .n 2219 to 2882 1 to 664       664/664
(100 %)
1 diff
(99.9 %id)
DB297211 cerebellum .n 3912 to 4431 521 to 1       521/521
(100 %)
2 diff
(99.7 %id)
DB313414 tongue, tumor tissue .n 3925 to 4431 507 to 1   tiling clone,   507/508
(99 %)
0 diff
(100 %id)
AL564419 brain, fetal liver, Liver, neuroblastoma cells .n 4046 to 5014 969 to 1   tiling clone,   969/972
(99 %)
9 diff
(99.1 %id)
DC419222 stomach, tumor tissue .o 1 to 568 5 to 572   tiling clone,   572/572
(100 %)
0 diff
(100 %id)
DC327307 caudate nucleus .o 4 to 553 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC351207 brain .o 4 to 570 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
DC351435 brain .o 4 to 569 1 to 566       566/567
(99 %)
1 diff
(99.9 %id)
DC370444   .o 4 to 542 1 to 539       539/539
(100 %)
0 diff
(100 %id)
DC398583 testis .o 4 to 571 1 to 571       569/571
(99 %)
3 diff
(99.5 %id)
BG723624 testis .o 41 to 550 1 to 526       526/526
(100 %)
24 diff
(95.5 %id)
BI462690 testis .o 41 to 811 1 to 772 T150N T152D V168S V169C L170S ... tiling clone,   772/772
(100 %)
13 diff
(98.4 %id)
TI_44350871   .p 1 to 799 124 to 931 E110R Y111V Q112P H113T Y114L ... tiling clone,   808/992
(81 %)
34 diff
(96.6 %id)
DC339588 thalamus .p 91 to 625 1 to 535       535/535
(100 %)
2 diff
(99.7 %id)
DC330036 hippocampus .p 92 to 656 1 to 565   tiling clone,   565/565
(100 %)
2 diff
(99.7 %id)
DA612822   .q 1 to 590 2 to 591   tiling clone, capped   590/590
(100 %)
0 diff
(100 %id)
DC355516   .q 11 to 519 1 to 516       516/539
(95 %)
7 diff
(98.8 %id)
DB255108 uterus .q 12 to 584 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
CX788311 human embryonic stem cells .q 38 to 650 1 to 613 H137P tiling clone,   613/613
(100 %)
1 diff
(99.9 %id)
DA308603 hippocampus .r 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DB071055 testis .s 1 to 533 2 to 534   tiling clone, capped   533/533
(100 %)
0 diff
(100 %id)
BU178053 melanotic melanoma, skin .s 7 to 835 5 to 838 V88G K89Q G90S T115N D116* tiling clone,   834/841
(99 %)
17 diff
(98.0 %id)
DA432050 colon .s 8 to 592 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DA273139 caudate nucleus .s 17 to 562 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA588243 lung .s 18 to 566 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BP321057 placenta .t 1 to 583 1 to 583 exact tiling clone,   583/583
(100 %)
0 diff
(100 %id)
CD697880 normal nasopharynx .u 1 to 243 20 to 265   tiling clone,   247/265
(93 %)
10 diff
(96.3 %id)
DA447684 tongue, tumor tissue .u 55 to 622 2 to 569 exact tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DA902358   .va -8 to 563 2 to 573 exact tiling clone, capped   572/573
(99 %)
2 diff
(99.7 %id)
DA618931   .vb 1 to 591 2 to 592 exact tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
DC296749 cord Blood .vc 1 to 529 6 to 535 exact tiling clone,   535/535
(100 %)
1 diff
(99.9 %id)
CR742146   .vd 1 to 712 1 to 711   tiling clone,   711/713
(99 %)
4 diff
(99.5 %id)
T95456.
matches multiple genes
liver and spleen .vd 1 to 335 1 to 337     also hits gene LOC389053 337/338
(99 %)
16 diff
(95.3 %id)
W78929 liver and spleen .vd 2 to 406 1 to 410       410/412
(99 %)
12 diff
(97.1 %id)
W01599 liver and spleen .vd 34 to 502 1 to 463       463/463
(100 %)
8 diff
(98.3 %id)
AW974973   .vd 262 to 873 40 to 653       614/660
(93 %)
17 diff
(97.5 %id)
AA654291   .vd 262 to 618 7 to 362       356/362
(98 %)
6 diff
(98.4 %id)
W85697 liver and spleen .vd 562 to 1139 571 to 1   tiling clone,   571/640
(89 %)
10 diff
(98.5 %id)
FN082377 breast carcinoma .vd 586 to 685 1 to 102       102/102
(100 %)
2 diff
(98.1 %id)
BG230908 nasopharynx, normal epithelium .vd 640 to 844 40 to 244       205/244
(84 %)
6 diff
(97.6 %id)
N71253 liver and spleen .vd 683 to 1139 467 to 1       467/470
(99 %)
9 diff
(98.1 %id)
AA702021 liver and spleen .vd 691 to 1139 449 to 1       449/449
(100 %)
0 diff
(100 %id)
BQ026186 placenta .vd 713 to 1139 444 to 18   AAA   427/427
(100 %)
1 diff
(99.8 %id)
AI342739 carcinoid, lung .vd 718 to 1138 421 to 1       421/421
(100 %)
0 diff
(100 %id)
AA676215 liver and spleen .vd 737 to 1139 403 to 1       403/407
(99 %)
0 diff
(100 %id)
AI002315 carcinoid, lung .vd 791 to 1138 348 to 1       348/348
(100 %)
0 diff
(100 %id)
AA776281 liver and spleen .vd 812 to 1139 328 to 1       328/328
(100 %)
0 diff
(100 %id)
DA411877 thalamus .vd 936 to 1416 2 to 483 exact tiling clone, capped   482/482
(100 %)
1 diff
(99.8 %id)
AW265593 normal squamous epithelium, floor of mouth .vd 959 to 1146 9 to 196     Submitted on the opposite strand 188/196
(95 %)
6 diff
(97.0 %id)
T95354.
matches multiple genes
liver and spleen .vd 1058 to 1119 63 to 2   tiling clone, also hits gene LOC389053 62/63
(98 %)
0 diff
(100 %id)
DA607474   .ve 1 to 476 2 to 477 exact tiling clone, capped   476/476
(100 %)
0 diff
(100 %id)
DA320133 hippocampus .vf 1 to 536 2 to 539 K75X capped   538/538
(100 %)
3 diff
(99.5 %id)
DA320160 hippocampus .vf 1 to 545 2 to 546 exact tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
DA339583 hippocampus .vf 4 to 581 2 to 580 exact capped   579/581
(99 %)
7 diff
(98.8 %id)
DA222849 brain .vf 5 to 535 2 to 533 exact capped   532/532
(100 %)
4 diff
(99.3 %id)
DA782527 brain .vf 12 to 591 2 to 581 P11T tiling clone, capped   580/587
(98 %)
4 diff
(99.4 %id)
DA155366 amygdala .vg 1 to 561 2 to 563 exact tiling clone, capped   562/562
(100 %)
3 diff
(99.5 %id)
BE769022 prostate_tumor .vh 1 to 414 1 to 416 E9X Y10P H11D N12M Y13I ... tiling clone,   414/416
(99 %)
10 diff
(97.6 %id)
H13039.
matches multiple genes
whole brain .vh 102 to 472 1 to 372   tiling clone, also hits gene LOC644063 372/377
(98 %)
3 diff
(99.3 %id)
BM723871 eye, fetal eye .vh 197 to 954 1 to 757   tiling clone,   757/757
(100 %)
8 diff
(99.0 %id)
TI_57152490   .vh 519 to 1329 24 to 825       802/1058
(75 %)
6 diff
(99.5 %id)
BI765348 pooled colon, kidney, stomach .vh 530 to 1329 1 to 791       791/1024
(77 %)
6 diff
(99.5 %id)
CS266320   .vh 593 to 702 1 to 110       110/110
(100 %)
0 diff
(100 %id)
NR_029605.1   .vh 593 to 702 1 to 110   RefSeq,   110/110
(100 %)
0 diff
(100 %id)
AW367387 head_neck .vh 633 to 1152 531 to 10       522/531
(98 %)
0 diff
(100 %id)
BM805907 brain, hippocampus .vh 702 to 1271 15 to 584   tiling clone,   570/1306
(43 %)
4 diff
(99.7 %id)
AA847994 ovary .vh 843 to 1364 1 to 515       515/515
(100 %)
37 diff
(92.9 %id)
BQ716332 sympathetic trunk .vh 877 to 1550 1 to 681   tiling clone,   681/970
(70 %)
10 diff
(99.0 %id)
BM680037 eye, fetal eye .vh 1428 to 2181 754 to 1   tiling clone,   754/754
(100 %)
1 diff
(99.9 %id)
DB068543 testis .vi 1 to 542 2 to 543 exact tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
DN912831   .vj 1 to 524 31 to 554 exact tiling clone,   528/554
(95 %)
7 diff
(98.8 %id)
DN912830   .vj 39 to 523 536 to 52 exact AAA   485/485
(100 %)
1 diff
(99.8 %id)
DB131301 thymus .vk 1 to 549 5 to 554 exact tiling clone, capped   553/553
(100 %)
2 diff
(99.7 %id)
DA246961 brain .vk 1 to 523 3 to 525 exact capped   524/524
(100 %)
4 diff
(99.3 %id)
AW594620 pooled germ cell tumors .vk 125 to 518 396 to 3 exact tiling clone,   394/396
(99 %)
0 diff
(100 %id)
BF115594 brain, glioblastoma (pooled) .vk 125 to 517 393 to 1 exact     393/393
(100 %)
0 diff
(100 %id)
DB236133 trachea .vl 1 to 445 12 to 456   tiling clone, capped   449/455
(98 %)
6 diff
(98.7 %id)
DC349203   .vl 207 to 776 1 to 571   tiling clone,   571/571
(100 %)
6 diff
(99.0 %id)
DC411220 kidney, tumor tissue .vl 209 to 786 1 to 578 exact tiling clone,   578/578
(100 %)
2 diff
(99.7 %id)
DA966016 stomach .vm 1 to 550 6 to 555 exact capped   554/554
(100 %)
1 diff
(99.9 %id)
BP349455 brain .vm 1 to 579 5 to 583 exact tiling clone,   583/583
(100 %)
0 diff
(100 %id)
DB046007 testis .vm 1 to 561 6 to 566 E7* capped   565/565
(100 %)
4 diff
(99.3 %id)
DB124602 thymus .vm 1 to 564 6 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
DA350891 substantia nigra .vm 1 to 572 2 to 573 exact capped   572/572
(100 %)
1 diff
(99.9 %id)
DA532879 brain .vm 5 to 586 2 to 583 exact capped   582/582
(100 %)
3 diff
(99.5 %id)
DA674928   .vm 5 to 585 2 to 582 exact capped   581/581
(100 %)
1 diff
(99.9 %id)
DB246365 uterus, tumor tissue .vm 5 to 579 2 to 576 exact capped   575/575
(100 %)
1 diff
(99.9 %id)
DR158480 human embryonic stem cells differentiated toan early endodermal cell type .vm 10 to 829 1 to 820 exact tiling clone,   820/820
(100 %)
0 diff
(100 %id)
BM470339 eye, retinoblastoma .vm 19 to 524 1 to 503 G55X     503/873
(57 %)
6 diff
(99.4 %id)
CN264513 embryonic stem cells, cell lines H1, H7, andH9 .vm 69 to 825 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
AW402582 lymph .vm 94 to 613 7 to 526 exact     520/526
(98 %)
10 diff
(98.1 %id)
TI_154139017   .vm 94 to 767 79 to 750 exact     672/773
(86 %)
17 diff
(97.9 %id)
DA504765 brain .vm 819 to 1388 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
AW996873 breast_normal .vm 1341 to 1868 1 to 526   tiling clone,   526/526
(100 %)
4 diff
(99.3 %id)
AV750932 Pituitary .vm 1518 to 1835 1 to 309   tiling clone,   309/309
(100 %)
6 diff
(98.1 %id)
DA307081 hippocampus .vn-u 1 to 472 2 to 472   tiling clone, capped   471/471
(100 %)
2 diff
(99.6 %id)
DA280996 corpus callosum .vn-u 151 to 726 2 to 577   tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
AU279775   .vn-u 269 to 830 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
AW367474 head_neck .vn-u 285 to 799 16 to 527       512/532
(96 %)
11 diff
(98.0 %id)
AW577935 colon_normal .vn-u 295 to 812 517 to 1       517/517
(100 %)
3 diff
(99.5 %id)
BQ955093 sciatic nerve .vn-u 707 to 1560 1 to 859   tiling clone,   859/860
(99 %)
11 diff
(98.8 %id)
BX456505 thymus .vo 1 to 451 1 to 451 exact tiling clone,   451/451
(100 %)
0 diff
(100 %id)
DB235064 trachea .vo 347 to 866 2 to 521   tiling clone, capped   520/520
(100 %)
0 diff
(100 %id)
DB147915 thymus .vo 693 to 1248 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DA254833 caudate nucleus .vo 732 to 1285 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB231230 trachea .vo 747 to 1325 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
BQ349595 head_neck .vo 786 to 1082 13 to 313       301/313
(96 %)
6 diff
(98.1 %id)
AL712432 human skeletal muscle .vo 835 to 1371 11 to 549   tiling clone,   539/549
(98 %)
6 diff
(99.0 %id)
AL712429 human skeletal muscle .vo 837 to 1288 14 to 469       456/469
(97 %)
6 diff
(98.8 %id)
AA093661   .vo 858 to 1078 1 to 222       222/225
(98 %)
5 diff
(97.8 %id)
CA406826 adipose .vp 1 to 618 618 to 1 exact tiling clone, Submitted on the opposite strand 618/618
(100 %)
2 diff
(99.7 %id)
BQ292438 amnion_normal .vp 113 to 320 238 to 22 L2V V4C Y5*     217/243
(89 %)
0 diff
(100 %id)
TI_149289531   .vp 209 to 906 780 to 84   AAA   697/954
(73 %)
5 diff
(99.5 %id)
TI_149296126   .vp 209 to 906 780 to 84   AAA   697/948
(73 %)
4 diff
(99.6 %id)
TI_149292624   .vp 210 to 906 781 to 86   AAA   696/697
(99 %)
4 diff
(99.5 %id)
CB528659 Aveolar Macrophage, lung .vp 218 to 906 707 to 19   AAA   689/689
(100 %)
0 diff
(100 %id)
CD369831 Alveolar Macrophage, lung .vp 220 to 906 703 to 19   AAA   685/686
(99 %)
2 diff
(99.8 %id)
TI_57152461   .vp 221 to 907 33 to 723       691/723
(95 %)
23 diff
(96.9 %id)
TI_149271772   .vp 224 to 906 768 to 88   AAA   681/998
(68 %)
3 diff
(99.7 %id)
BU687774 lung .vp 224 to 906 701 to 19   AAA   683/684
(99 %)
0 diff
(100 %id)
BU684152 lung, Primary Lung Cystic Fibrosis EpithelialCells .vp 224 to 906 700 to 19   AAA   682/683
(99 %)
1 diff
(99.9 %id)
BM996298 lung, Metastatic Chondrosarcoma .vp 227 to 906 698 to 19   AAA   680/680
(100 %)
0 diff
(100 %id)
BQ010122 Chondrosarcoma, Left Pubic Bone .vp 236 to 906 689 to 19   AAA   671/671
(100 %)
0 diff
(100 %id)
BM994941 Chondrosarcoma, Left Pubic Bone .vp 255 to 906 670 to 19   AAA   652/652
(100 %)
0 diff
(100 %id)
BM696324 eye, lens .vp 259 to 621 1 to 363   fully sequenced,   363/363
(100 %)
0 diff
(100 %id)
CB149665 Liver .vp 272 to 636 1 to 365       365/365
(100 %)
0 diff
(100 %id)
BY995930   .vp 273 to 906 667 to 34   AAA Submitted on the opposite strand 634/634
(100 %)
2 diff
(99.7 %id)
TI_154046415   .vp 286 to 906 712 to 92   AAA   621/1008
(61 %)
0 diff
(100 %id)
CA412325 Chondrosarcoma Grade II, Left Pelvis .vp 286 to 906 639 to 19   AAA   621/632
(98 %)
0 diff
(100 %id)
CB215842 normal endometrium, late proliferativephase, cycle day 13, uterus .vp 290 to 899 1 to 610       610/610
(100 %)
0 diff
(100 %id)
BU681679 lung .vp 304 to 906 621 to 19   AAA   603/603
(100 %)
0 diff
(100 %id)
AA377112 small intestine .vp 311 to 508 1 to 198       198/198
(100 %)
0 diff
(100 %id)
CV571718 cornea, eye .vp 329 to 627 1 to 299       299/299
(100 %)
0 diff
(100 %id)
AA306367   .vp 333 to 730 1 to 398       398/398
(100 %)
0 diff
(100 %id)
CF129262 Chondrosarcoma Lung Metastasis cell lines, lung .vp 335 to 906 1 to 572   AAA   572/572
(100 %)
0 diff
(100 %id)
TI_154190942   .vp 335 to 906 51 to 622   AAA   572/572
(100 %)
0 diff
(100 %id)
AA582167 germ cell tumor .vp 351 to 907 557 to 1   tiling clone,   557/557
(100 %)
0 diff
(100 %id)
CN264536 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .vp 353 to 706 1 to 354       354/354
(100 %)
0 diff
(100 %id)
BG254839 adenocarcinoma, cell line, Prostate .vp 369 to 906 1 to 538   AAA   538/538
(100 %)
0 diff
(100 %id)
BU735377 eye, lens .vp 591 to 906 336 to 19   fully sequenced, AAA   318/318
(100 %)
0 diff
(100 %id)
T88912 liver and spleen .vq-u 426 to 770 347 to 1   tiling clone,   347/347
(100 %)
10 diff
(97.2 %id)
DA497354 brain .vr 1 to 589 2 to 590 exact tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
DA688372   .vr 46 to 589 2 to 546 E4* capped   545/545
(100 %)
1 diff
(99.9 %id)
DC340174 thalamus .vs 1 to 581 1 to 581 exact tiling clone,   581/581
(100 %)
0 diff
(100 %id)
CN264549 embryonic stem cells, DMSO-treated H9 cellline .vs 38 to 529 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
DA308056 hippocampus .vt 1 to 574 2 to 575 exact tiling clone, capped   574/574
(100 %)
2 diff
(99.7 %id)
DA902357   .vt 1 to 562 2 to 564 T3A tiling clone, capped   563/564
(99 %)
3 diff
(99.5 %id)
DB031961 testis .vu 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
4 diff
(99.3 %id)
1169 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh, .vi, .vj, .vk, .vl, .vm, .vn-u, .vo, .vp, .vq-u, .vr, .vs, .vt, .vu Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI