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Gene RPL36AandHNRNPH2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
649 supporting clones for gene RPL36AandHNRNPH2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA903181   .a 1 to 484 2 to 487   tiling clone, capped   486/486
(100 %)
2 diff
(99.6 %id)
DA711903   .a 15 to 588 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA547666   .a 17 to 527 2 to 512   capped   511/511
(100 %)
2 diff
(99.7 %id)
NM_001032393.1   .a 22 to 2318 1 to 2297 exact RefSeq, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2297/2297
(100 %)
0 diff
(100 %id)
BU663446 blood .a 27 to 512 1 to 486       486/486
(100 %)
9 diff
(98.2 %id)
DA700884   .a 27 to 525 2 to 501   capped   500/500
(100 %)
1 diff
(99.8 %id)
BG722142 testis .a 28 to 770 1 to 743       743/744
(99 %)
6 diff
(99.2 %id)
DA145962 amygdala .a 34 to 573 2 to 546   capped   545/546
(99 %)
6 diff
(99.0 %id)
DA472938   .a 34 to 596 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA629631 Kidney .a 34 to 575 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA650766   .a 34 to 587 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA655912   .a 34 to 578 2 to 547   capped   546/551
(99 %)
2 diff
(99.7 %id)
DA784099 brain .a 34 to 616 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA936856 Spleen .a 34 to 639 2 to 608   capped   607/607
(100 %)
2 diff
(99.7 %id)
DA354410 substantia nigra .a 36 to 589 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DA539764 Kidney .a 36 to 607 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA590286 lung .a 36 to 600 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DA705136   .a 36 to 525 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
DA706905   .a 36 to 624 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DB247455 uterus .a 36 to 589 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB254133 uterus .a 36 to 501 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
BP225123   .a 37 to 617 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BU167621 eye, retinoblastoma .a 37 to 892 1 to 863   tiling clone,   863/886
(97 %)
19 diff
(97.9 %id)
BM827710 stomach .a 37 to 553 1 to 517       517/517
(100 %)
5 diff
(99.1 %id)
DA421308 cervix .a 39 to 618 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BG699134 brain, hippocampus .a 40 to 805 1 to 766       766/770
(99 %)
6 diff
(99.3 %id)
DB167395 kidney, tumor tissue .a 40 to 604 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
BP207133 coronary artery .a 41 to 608 1 to 569       569/569
(100 %)
3 diff
(99.5 %id)
BP226587   .a 41 to 622 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP231036 brain .a 41 to 622 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA525491 brain .a 41 to 602 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
CB141006 Liver .a 41 to 621 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DA010737 adrenal gland .a 42 to 617 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA012972 adrenal gland .a 42 to 619 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA029020   .a 42 to 616 2 to 579   capped   578/578
(100 %)
5 diff
(99.2 %id)
DA253286 caudate nucleus .a 42 to 622 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
BP221254 colon .a 42 to 615 1 to 574       574/574
(100 %)
11 diff
(98.1 %id)
DA476966   .a 42 to 598 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA504653 brain .a 42 to 592 8 to 559   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA528194 brain .a 42 to 639 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA578680   .a 42 to 592 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA612470   .a 42 to 575 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA745927   .a 42 to 575 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA765840 tongue .a 42 to 608 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA836267 placenta .a 42 to 581 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA840013 placenta .a 42 to 599 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA906761   .a 42 to 618 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA908169   .a 42 to 552 2 to 513   capped   512/517
(99 %)
2 diff
(99.7 %id)
DB119992 thymus .a 42 to 676 2 to 636   capped   635/635
(100 %)
0 diff
(100 %id)
DB171207 kidney, tumor tissue .a 42 to 592 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB496393 hypothalamus .a 43 to 507 1 to 465       465/465
(100 %)
2 diff
(99.6 %id)
DA709648   .a 44 to 582 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB000159 breast, tumor tissue .a 44 to 525 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
BP242071 Liver .a 45 to 605 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BP338256 Spleen .a 45 to 619 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BP372146 umbilical cord .a 45 to 625 1 to 580       580/583
(99 %)
8 diff
(98.7 %id)
DA060378 cerebellum .a 46 to 614 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA065690 cerebellum .a 46 to 602 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA085687 cerebellum .a 46 to 622 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA158032 amygdala .a 46 to 621 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA182475 amygdala .a 46 to 632 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA203489 brain .a 46 to 634 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA206255 brain .a 46 to 628 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA210810 brain .a 46 to 607 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA253512 caudate nucleus .a 46 to 630 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA266387 caudate nucleus .a 46 to 594 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA344585 substantia nigra .a 46 to 622 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA476147   .a 46 to 618 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA512714 brain .a 46 to 792 2 to 750   capped   749/751
(99 %)
8 diff
(99.0 %id)
DA578748   .a 46 to 605 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA582993 lung .a 46 to 643 2 to 601   capped   600/600
(100 %)
2 diff
(99.7 %id)
DA706307   .a 46 to 575 2 to 533   capped   532/532
(100 %)
3 diff
(99.5 %id)
DA706326   .a 46 to 575 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
DA708593   .a 46 to 602 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA713030   .a 46 to 600 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA776458 brain .a 46 to 616 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA914814   .a 46 to 615 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA917203 small intestine .a 46 to 626 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DB209049 trachea .a 46 to 525 2 to 482   capped   481/481
(100 %)
1 diff
(99.8 %id)
DB252281 uterus .a 46 to 631 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB261355 uterus .a 46 to 598 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB264617 uterus .a 46 to 642 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
DB268305 uterus .a 46 to 599 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB474398 hippocampus .a 47 to 546 1 to 501       501/501
(100 %)
10 diff
(98.1 %id)
DA782710 brain .a 47 to 635 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
AL134137 brain .a 49 to 219 28 to 198       171/198
(86 %)
6 diff
(97.0 %id)
BM761649 lymph node, stomach .a 49 to 666 1 to 618       618/618
(100 %)
2 diff
(99.7 %id)
BM842816 lymph node, stomach .a 49 to 689 1 to 641       641/641
(100 %)
0 diff
(100 %id)
DA704654   .a 50 to 525 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
DA922700 small intestine .a 50 to 614 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA587266 lung .a 54 to 546 2 to 496   capped   495/495
(100 %)
2 diff
(99.6 %id)
DA080795 cerebellum .a 55 to 633 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA501617 brain .a 58 to 634 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA656971   .a 58 to 527 2 to 471   capped   470/470
(100 %)
0 diff
(100 %id)
DA785580 brain .a 58 to 653 2 to 598   capped   597/597
(100 %)
2 diff
(99.7 %id)
DA846508 placenta .a 58 to 614 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA884547   .a 58 to 633 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DA140559 alzheimer cortex .a 64 to 606 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA298131 hippocampus .a 64 to 549 2 to 489   capped   488/488
(100 %)
2 diff
(99.6 %id)
DA673617   .a 64 to 642 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DN993340 brain, whole brain .a 64 to 666 9 to 611       603/611
(98 %)
0 diff
(100 %id)
DA494727 brain .a 65 to 622 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BP240503 Liver .a 66 to 617 1 to 552       552/552
(100 %)
3 diff
(99.5 %id)
CA395502 eye, RPE/choroid .a 67 to 677 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BI093640 cervix .a 69 to 837 1 to 772       772/774
(99 %)
11 diff
(98.6 %id)
BE883923 leiomyosarcoma, uterus .a 73 to 785 1 to 712       712/712
(100 %)
10 diff
(98.6 %id)
BQ548968 insulinoma, Pancreas .a 75 to 692 1 to 618       618/618
(100 %)
5 diff
(99.2 %id)
BU781729 insulinoma, Pancreas .a 75 to 698 1 to 623     Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 623/623
(100 %)
6 diff
(99.1 %id)
BU788010 insulinoma, Pancreas .a 75 to 704 1 to 630     Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 630/630
(100 %)
6 diff
(99.1 %id)
DA375133 thalamus .a 80 to 645 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
T06265   .a 81 to 353 123 to 395       273/395
(69 %)
8 diff
(98.0 %id)
DA167396 amygdala .a 98 to 667 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BC130343 Brain, cerebellum, PCR rescued clones .a 150 to 2016 1 to 1867 exact tiling clone,   1867/1867
(100 %)
0 diff
(100 %id)
BC130345 Brain, cerebellum, PCR rescued clones .a 150 to 2016 1 to 1867 exact     1867/1867
(100 %)
1 diff
(100.0 %id)
TI_1607544571   .a 150 to 1345 52 to 1248       1197/1297
(92 %)
6 diff
(99.6 %id)
BU175544 large cell carcinoma, lung .a 163 to 984 1 to 828       828/846
(97 %)
11 diff
(98.7 %id)
BM711429 eye, fetal eyes .a 181 to 679 1 to 499     Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 499/499
(100 %)
0 diff
(100 %id)
TI_1607546385   .a 242 to 1371 1135 to 7       1129/1281
(88 %)
0 diff
(100 %id)
BU173058 melanotic melanoma, skin .a 262 to 1130 1 to 880       880/933
(94 %)
23 diff
(97.6 %id)
BU171682 melanotic melanoma, skin .a 265 to 1064 1 to 807       807/907
(88 %)
9 diff
(99.1 %id)
DA671684   .a 340 to 922 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BI223217 cervical carcinoma cell line, cervix .a 364 to 868 388 to 918       531/942
(56 %)
6 diff
(99.4 %id)
CN428567 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 395 to 1122 1 to 729       729/729
(100 %)
1 diff
(99.9 %id)
DR158940 human embryonic stem cells differentiated toan early endodermal cell type .a 422 to 1073 1 to 652       652/652
(100 %)
0 diff
(100 %id)
DR763470 embryonic stem .a 460 to 1256 1 to 797       797/797
(100 %)
0 diff
(100 %id)
BU154901 melanotic melanoma, skin .a 614 to 1447 1 to 837       837/911
(91 %)
9 diff
(99.1 %id)
AL134884 melanoma (MeWo cell line) .a 631 to 1260 1 to 630       630/630
(100 %)
0 diff
(100 %id)
FN051366 breast carcinoma .a 705 to 783 1 to 80       80/80
(100 %)
5 diff
(93.8 %id)
CB134552 Liver .a 709 to 1330 1 to 622       622/622
(100 %)
2 diff
(99.7 %id)
TI_1607545407   .a 713 to 1903 3 to 1188       1186/1278
(92 %)
6 diff
(99.6 %id)
BM699715 eye, lens .a 751 to 1097 1 to 347     Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 347/347
(100 %)
0 diff
(100 %id)
BG528737 adenocarcinoma, Prostate .a 858 to 1481 1 to 624       624/624
(100 %)
0 diff
(100 %id)
BY996244   .a 894 to 1549 21 to 676       656/676
(97 %)
6 diff
(99.2 %id)
BU737534 eye, lens .a 1654 to 2318 682 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 664/664
(100 %)
2 diff
(99.7 %id)
BM670678 eye, fetal eyes .a 1674 to 2318 663 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 645/645
(100 %)
2 diff
(99.7 %id)
BU786859 insulinoma, Pancreas .a 1702 to 2317 632 to 17   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 616/616
(100 %)
0 diff
(100 %id)
BU784342 insulinoma, Pancreas .a 1750 to 2317 584 to 17   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 568/568
(100 %)
0 diff
(100 %id)
DB316499 brain .a 1814 to 2318 505 to 1       505/505
(100 %)
19 diff
(96.3 %id)
DA686966   .b 1 to 545 2 to 546   tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
DA276712 corpus callosum .b 33 to 599 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA548174   .b 33 to 592 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA612424   .b 57 to 613 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA617342   .b 60 to 635 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB115217 thymus .b 60 to 614 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA902858   .b 67 to 623 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA943222 Spleen .b 67 to 638 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
TI_45209058   .b 70 to 750 90 to 769       676/769
(87 %)
8 diff
(99.0 %id)
NM_019597.3   .b 70 to 2378 1 to 2309 exact RefSeq, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2309/2309
(100 %)
0 diff
(100 %id)
DA028562   .b 72 to 640 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA136094 alzheimer cortex .b 72 to 712 2 to 642   capped   641/641
(100 %)
0 diff
(100 %id)
DA143666 alzheimer cortex .b 72 to 625 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB484704 hypothalamus .b 73 to 742 1 to 670       670/670
(100 %)
0 diff
(100 %id)
DA155160 amygdala .b 74 to 633 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA172772 amygdala .b 74 to 633 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA878510 Prostate .b 74 to 632 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA905382   .b 74 to 627 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA926012 small intestine .b 74 to 635 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BU164436 large cell carcinoma, lung .b 81 to 940 1 to 870       870/871
(99 %)
21 diff
(97.6 %id)
DA007197   .b 82 to 654 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA007226   .b 82 to 656 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA031209   .b 82 to 644 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA052630   .b 82 to 633 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA066939 cerebellum .b 82 to 660 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA145340 amygdala .b 82 to 653 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA171807 amygdala .b 82 to 639 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA673174   .b 82 to 638 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA692698   .b 82 to 644 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA764947 tongue .b 82 to 654 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA775826 brain .b 82 to 649 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA876486 Prostate .b 82 to 667 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA905018   .b 82 to 633 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA986610 synovial membrane tissue from rheumatioidarthritis .b 82 to 649 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB112421 thymus .b 82 to 665 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB257499 uterus .b 82 to 640 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DC352863 brain .b 83 to 422 1 to 340       340/340
(100 %)
0 diff
(100 %id)
DC373532 tongue .b 83 to 401 1 to 319       319/319
(100 %)
0 diff
(100 %id)
BP343445 stomach mucosa .b 83 to 661 1 to 579       579/579
(100 %)
0 diff
(100 %id)
BP343616 stomach mucosa .b 83 to 661 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DA171750 amygdala .b 84 to 646 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA257698 caudate nucleus .b 84 to 659 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA304916 hippocampus .b 84 to 661 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA474729   .b 84 to 642 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA491139 brain .b 84 to 635 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA504220 brain .b 84 to 644 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA616456   .b 84 to 673 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA707490   .b 84 to 646 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA780529 brain .b 84 to 665 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB004690 breast, tumor tissue .b 84 to 654 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB016043 esophageal, tumor tissue .b 84 to 659 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
TI_44166165   .b 85 to 865 121 to 912       792/912
(86 %)
27 diff
(97.1 %id)
DA946813 Spleen .b 86 to 648 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB128055 thymus .b 86 to 650 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA307524 hippocampus .b 87 to 671 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA907436   .b 87 to 640 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB201170 trachea .b 87 to 672 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB258718 uterus .b 87 to 641 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA290622 hippocampus .b 89 to 657 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DC365287   .b 89 to 444 1 to 356       356/356
(100 %)
0 diff
(100 %id)
DA060271 cerebellum .b 90 to 646 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA062368 cerebellum .b 90 to 653 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA067059 cerebellum .b 90 to 659 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA085262 cerebellum .b 90 to 667 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA134141 alzheimer cortex .b 90 to 655 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA169392 amygdala .b 90 to 662 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA282285 corpus callosum .b 90 to 651 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA294705 hippocampus .b 90 to 649 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA297665 hippocampus .b 90 to 664 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA300656 hippocampus .b 90 to 664 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA388555 thalamus .b 90 to 661 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA466117   .b 90 to 659 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA475565   .b 90 to 661 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA513996 brain .b 90 to 652 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA553033   .b 90 to 654 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA675146   .b 90 to 670 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA705919   .b 90 to 651 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA705929   .b 90 to 655 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA747548   .b 90 to 646 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA774389 brain .b 90 to 668 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA789034 brain .b 90 to 675 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA817096   .b 90 to 652 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA819917   .b 90 to 643 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA825520 pericardium .b 90 to 672 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA868403 Prostate .b 90 to 647 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA912953   .b 90 to 667 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA973204 synovial membrane tissue from rheumatioidarthritis .b 90 to 661 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB101906 thymus .b 90 to 642 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB129715 thymus .b 90 to 658 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB171977 kidney, tumor tissue .b 90 to 676 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB244104 stomach, tumor tissue .b 90 to 664 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB248382 uterus .b 90 to 695 2 to 607   capped   606/606
(100 %)
0 diff
(100 %id)
DA164421 amygdala .b 91 to 658 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BP341852 stomach mucosa .b 91 to 663 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DA030080   .b 93 to 651 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DC365609   .b 93 to 377 1 to 286       286/286
(100 %)
1 diff
(99.7 %id)
BP343136 stomach mucosa .b 93 to 674 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA002884   .b 94 to 651 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA046236 bladder .b 94 to 657 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA144112 amygdala .b 94 to 652 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA252875 caudate nucleus .b 94 to 668 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA355515 subthalamic nucleus .b 94 to 650 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA463204   .b 94 to 653 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA694732   .b 94 to 675 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA818316   .b 94 to 657 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA824269 pericardium .b 94 to 656 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA885153   .b 94 to 650 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA889183   .b 94 to 645 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA905514   .b 94 to 651 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA924771 small intestine .b 94 to 678 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA978245 synovial membrane tissue from rheumatioidarthritis .b 94 to 648 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB268057 uterus .b 94 to 658 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB473330 hippocampus .b 95 to 585 1 to 491       491/491
(100 %)
0 diff
(100 %id)
DB473735 hippocampus .b 95 to 550 1 to 457       457/457
(100 %)
6 diff
(98.7 %id)
DA930455 small intestine .b 96 to 689 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA144829 amygdala .b 98 to 682 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA762761 tongue .b 99 to 662 16 to 579   capped   564/564
(100 %)
0 diff
(100 %id)
BP358061 mammary gland .b 99 to 679 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA149929 amygdala .b 100 to 680 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA282448 corpus callosum .b 100 to 678 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BQ063071 lymph, lymphoma, cell line .b 100 to 1052 1 to 962       962/1022
(94 %)
20 diff
(98.1 %id)
BP342676 stomach mucosa .b 102 to 677 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DR760447 embryonic stem .b 104 to 970 1 to 867       867/867
(100 %)
1 diff
(99.9 %id)
DB460212 testis .b 105 to 565 1 to 461       461/461
(100 %)
0 diff
(100 %id)
DA296414 hippocampus .b 106 to 669 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CR624721 fetal liver .b 106 to 2327 1 to 2222 exact tiling clone,   2222/2222
(100 %)
0 diff
(100 %id)
DA615777   .b 106 to 683 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA776677 brain .b 106 to 681 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA813591   .b 106 to 675 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA887877   .b 106 to 661 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
CB134394 brain .b 110 to 724 1 to 615       615/615
(100 %)
0 diff
(100 %id)
ES307628 beard hair, skin .b 110 to 348 1 to 242       242/242
(100 %)
3 diff
(98.8 %id)
BM479918 embryonal carcinoma, cell line, testis .b 110 to 1067 1 to 969       969/1049
(92 %)
21 diff
(98.0 %id)
DB483410 hippocampus .b 111 to 566 1 to 456       456/456
(100 %)
0 diff
(100 %id)
DA265656 caudate nucleus .b 112 to 686 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA486569 brain .b 112 to 687 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB103601 thymus .b 112 to 672 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB119188 thymus .b 112 to 668 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB124194 thymus .b 112 to 672 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA730201   .b 113 to 914 2 to 806   capped   805/805
(100 %)
9 diff
(98.9 %id)
DA514896 brain .b 114 to 666 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BU171922 melanotic melanoma, skin .b 114 to 992 1 to 892       892/934
(95 %)
19 diff
(98.0 %id)
BU172557 melanotic melanoma, skin .b 114 to 911 1 to 805       805/833
(96 %)
14 diff
(98.4 %id)
BJ992610 hepatoblastoma .b 115 to 637 1 to 523       523/523
(100 %)
0 diff
(100 %id)
DC364391   .b 115 to 326 1 to 212       212/212
(100 %)
0 diff
(100 %id)
DA039306 bladder .b 116 to 682 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BI222309 cervical carcinoma cell line, cervix .b 116 to 873 1 to 759       759/759
(100 %)
5 diff
(99.4 %id)
CN428557 embryonic stem cells, DMSO-treated H9 cellline .b 117 to 754 1 to 638       638/638
(100 %)
0 diff
(100 %id)
BQ050496 leiomyosarcoma, uterus .b 117 to 965 1 to 858       858/1028
(83 %)
11 diff
(99.0 %id)
BP229126 brain .b 127 to 708 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA352756 substantia nigra .b 128 to 702 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA620337   .b 128 to 711 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA988177 synovial membrane tissue from rheumatioidarthritis .b 128 to 691 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CN428561 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 129 to 718 1 to 590       590/590
(100 %)
0 diff
(100 %id)
DA996992   .b 129 to 691 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA884742   .b 131 to 691 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA716848   .b 132 to 684 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BP208334 cerebellum .b 134 to 717 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DA423743   .b 140 to 694 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
AW407214 lymph .b 142 to 481 7 to 346     Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 340/346
(98 %)
11 diff
(96.9 %id)
CX781947 human embryonic stem cells .b 143 to 976 1 to 834       834/834
(100 %)
0 diff
(100 %id)
BG577424   .b 152 to 777 1 to 626       626/626
(100 %)
0 diff
(100 %id)
BQ214181 large cell carcinoma, lung .b 156 to 961 1 to 821       821/935
(87 %)
31 diff
(96.7 %id)
U01923 lymphoma .b 162 to 2380 1 to 2220 exact tiling clone,   2220/2220
(100 %)
2 diff
(100.0 %id)
AW575481 lymph .b 1811 to 2378 585 to 18   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 568/568
(100 %)
0 diff
(100 %id)
BJ992611 hepatoblastoma .b 1858 to 2344 487 to 1       487/487
(100 %)
1 diff
(99.8 %id)
DA689558   .c-u 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
TI_652740016   .c-u 118 to 499 17 to 398   fully sequenced, Submitted on the opposite strand 382/398
(95 %)
6 diff
(98.5 %id)
TI_1607546307   .c-u 132 to 806 680 to 8       673/1276
(52 %)
37 diff
(97.2 %id)
TI_1607546379   .c-u 139 to 803 677 to 13       665/1292
(51 %)
0 diff
(100 %id)
BP320117 placenta .c-u 244 to 825 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE891421 melanotic melanoma, skin .c-u 260 to 885 1 to 626   tiling clone,   626/627
(99 %)
1 diff
(99.9 %id)
ES312771 beard hair, skin .c-u 297 to 421 1 to 125       125/125
(100 %)
0 diff
(100 %id)
TI_652740015   .c-u 428 to 471 44 to 3   fully sequenced, Submitted on the opposite strand 42/44
(95 %)
7 diff
(84.1 %id)
AU123919   .d-u 1 to 728 2 to 735 exact tiling clone, capped   734/735
(99 %)
8 diff
(99.0 %id)
TI_1607544579   .d-u 31 to 1116 1144 to 66 G9V G10V S11Q S12F F13P ...     1079/1323
(81 %)
0 diff
(100 %id)
CU456877 epidermis .d-u 59 to 693 638 to 4 S12G   Submitted on the opposite strand 635/638
(99 %)
8 diff
(98.8 %id)
BG611889 adenocarcinoma, Prostate .d-u 109 to 805 1 to 700       700/700
(100 %)
4 diff
(99.5 %id)
AI174940 Liver .d-u 118 to 767 1 to 650       650/650
(100 %)
0 diff
(100 %id)
CF145780 CNCAP(3)T-225 cell line, Prostate .d-u 125 to 786 7 to 668       662/668
(99 %)
6 diff
(99.2 %id)
TI_154178056   .d-u 125 to 930 69 to 870       802/944
(84 %)
14 diff
(98.6 %id)
TI_154178746   .d-u 127 to 975 69 to 910       842/843
(99 %)
23 diff
(97.3 %id)
FN066981 breast carcinoma .d-u 139 to 216 1 to 79       79/79
(100 %)
4 diff
(95.0 %id)
BM756905 Ascites, stomach .d-u 190 to 757 1 to 568       568/568
(100 %)
0 diff
(100 %id)
FN077552 breast carcinoma .d-u 220 to 308 87 to 1     Submitted on the opposite strand 87/87
(100 %)
2 diff
(97.8 %id)
FN160492 breast carcinoma .d-u 222 to 312 92 to 1     Submitted on the opposite strand 92/92
(100 %)
1 diff
(99.0 %id)
FN107682 breast carcinoma .d-u 227 to 280 1 to 54       54/54
(100 %)
0 diff
(100 %id)
FN109460 breast carcinoma .d-u 250 to 334 86 to 1     Submitted on the opposite strand 86/86
(100 %)
1 diff
(98.9 %id)
BQ637054 eye, retina .d-u 405 to 1012 1 to 608       608/608
(100 %)
0 diff
(100 %id)
TI_149295102   .d-u 420 to 1412 1055 to 74   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 982/986
(99 %)
22 diff
(97.8 %id)
FN119903 breast carcinoma .d-u 450 to 514 67 to 1     Submitted on the opposite strand 67/68
(98 %)
2 diff
(97.1 %id)
TI_149293193   .d-u 451 to 1412 1038 to 85   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 954/996
(95 %)
6 diff
(99.4 %id)
CX783867 human embryonic stem cells .d-u 471 to 1192 1 to 722       722/722
(100 %)
0 diff
(100 %id)
BM712272 eye, lens .d-u 481 to 975 1 to 495   fully sequenced, Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 495/495
(100 %)
0 diff
(100 %id)
EL946852 eyeball .d-u 489 to 965 11 to 487       477/488
(97 %)
6 diff
(98.8 %id)
CF127855 Chondrosarcoma Lung Metastasis cell lines, lung .d-u 506 to 1311 1 to 804   tiling clone,   804/808
(99 %)
6 diff
(99.3 %id)
TI_154193541   .d-u 506 to 1407 51 to 944   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 894/898
(99 %)
18 diff
(98.0 %id)
TI_159678678   .d-u 547 to 1412 984 to 123   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 862/1008
(85 %)
90 diff
(91.1 %id)
CD677333 eye, Trabecular meshwork .d-u 554 to 1118 1 to 565       565/565
(100 %)
0 diff
(100 %id)
TI_154107269   .d-u 571 to 1412 920 to 88   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 833/935
(89 %)
13 diff
(98.7 %id)
FN119027 breast carcinoma .d-u 583 to 678 1 to 98       98/108
(90 %)
4 diff
(96.3 %id)
TI_154121201   .d-u 590 to 1412 903 to 87   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 817/988
(82 %)
15 diff
(98.5 %id)
FN051451 breast carcinoma .d-u 596 to 653 1 to 57       57/58
(98 %)
2 diff
(96.6 %id)
BU622622 cell lines, Chondrosarcoma .d-u 638 to 1412 793 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 775/775
(100 %)
3 diff
(99.7 %id)
TI_1607545405   .d-u 676 to 1114 10 to 445       436/1294
(33 %)
6 diff
(99.6 %id)
CA447026 Chondrosarcoma, Left Pubic Bone .d-u 700 to 1412 731 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 713/713
(100 %)
0 diff
(100 %id)
CA430018 Cell Line, Chondrosarcoma .d-u 701 to 1411 728 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 710/721
(98 %)
0 diff
(100 %id)
BQ772009 Chondrosarcoma Grade II, Left Pelvis .d-u 703 to 1412 728 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 710/710
(100 %)
1 diff
(99.9 %id)
DB553722 hypothalamus .d-u 706 to 1412 1 to 708     Submitted on the opposite strand 708/708
(100 %)
7 diff
(99.1 %id)
TI_154128557   .d-u 706 to 1412 809 to 103   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 707/708
(99 %)
2 diff
(99.8 %id)
BM985227 lung .d-u 706 to 1412 725 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 707/707
(100 %)
1 diff
(99.9 %id)
BM997703 lung, Metastatic Chondrosarcoma .d-u 726 to 1412 705 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 687/689
(99 %)
0 diff
(100 %id)
TI_154133009   .d-u 757 to 1412 755 to 97   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 659/956
(68 %)
6 diff
(99.4 %id)
GD150168   .d-u 771 to 848 78 to 1     Submitted on the opposite strand 78/79
(98 %)
3 diff
(96.3 %id)
TI_149274650   .d-u 818 to 1412 689 to 96   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 594/968
(61 %)
21 diff
(97.9 %id)
TI_149284533   .d-u 819 to 1412 682 to 90   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 593/1145
(51 %)
34 diff
(97.1 %id)
AI681525 carcinoid, lung .d-u 862 to 1413 552 to 1       552/552
(100 %)
0 diff
(100 %id)
TI_154090007   .d-u 863 to 1412 662 to 119   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 544/548
(99 %)
25 diff
(95.5 %id)
N46584 multiple sclerosis lesions .d-u 871 to 1001 1 to 141   fully sequenced,   141/141
(100 %)
0 diff
(100 %id)
BQ548729 insulinoma, Pancreas .d-u 908 to 1411 521 to 18   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 504/504
(100 %)
0 diff
(100 %id)
CK826284 insulinoma, Pancreas .d-u 924 to 1411 505 to 18   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 488/488
(100 %)
0 diff
(100 %id)
DB542101 hippocampus .d-u 939 to 1412 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
BU737739 eye, lens .d-u 945 to 1412 484 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 466/466
(100 %)
2 diff
(99.6 %id)
FN111500 breast carcinoma .d-u 949 to 1029 1 to 83       83/84
(98 %)
5 diff
(94.1 %id)
FN093877 breast carcinoma .d-u 951 to 1030 80 to 1     Submitted on the opposite strand 80/81
(98 %)
0 diff
(100 %id)
DB552327 hippocampus .d-u 956 to 1411 1 to 456     Submitted on the opposite strand 456/459
(99 %)
1 diff
(99.8 %id)
DB542504 hippocampus .d-u 958 to 1412 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
N40539 multiple sclerosis lesions .d-u 971 to 1419 452 to 1   tiling clone, fully sequenced,   452/452
(100 %)
2 diff
(99.6 %id)
DB543219 hippocampus .d-u 973 to 1412 1 to 441   AAA Submitted on the opposite strand 441/441
(100 %)
13 diff
(97.1 %id)
TI_153990888   .d-u 973 to 1418 549 to 104       446/549
(81 %)
0 diff
(100 %id)
DB525653 testis .d-u 977 to 1410 1 to 434     Submitted on the opposite strand 434/436
(99 %)
1 diff
(99.8 %id)
FN055724 breast carcinoma .d-u 1047 to 1108 71 to 10     Submitted on the opposite strand 62/72
(86 %)
0 diff
(100 %id)
GW493451 diffuse (Lauren) gastric adenocarcinoma, stomach .d-u 1228 to 1425 1 to 197       197/236
(83 %)
8 diff
(96.7 %id)
FN141053 breast carcinoma .d-u 1236 to 1333 1 to 93       93/93
(100 %)
6 diff
(93.6 %id)
FN103550 breast carcinoma .d-u 1243 to 1302 60 to 3     Submitted on the opposite strand 58/60
(96 %)
0 diff
(100 %id)
FN154636 breast carcinoma .d-u 1286 to 1403 1 to 118       118/118
(100 %)
6 diff
(95.0 %id)
FN116899 breast carcinoma .d-u 1293 to 1407 1 to 120       120/125
(96 %)
9 diff
(92.8 %id)
BC030103 Brain, hypothalamus .e-u 1 to 923 4 to 926 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 926/926
(100 %)
3 diff
(99.7 %id)
FN146092 breast carcinoma .e-u 354 to 451 99 to 1     Submitted on the opposite strand 99/101
(98 %)
3 diff
(97.1 %id)
BF061744 pooled germ cell tumors .e-u 385 to 923 539 to 1       539/539
(100 %)
0 diff
(100 %id)
BF223016 pooled germ cell tumors .e-u 385 to 923 539 to 1       539/539
(100 %)
0 diff
(100 %id)
AI475791 B-cell, chronic lymphotic leukemia .e-u 411 to 924 514 to 1   tiling clone,   514/514
(100 %)
0 diff
(100 %id)
BG715987 brain, hypothalamus .e-u 631 to 690 641 to 704 K158T R160E P161A Q162P V163S ... available from MGC,   660/706
(93 %)
29 diff
(95.9 %id)
BG943625 blood .f 1 to 417 1 to 417   tiling clone,   417/417
(100 %)
1 diff
(99.8 %id)
BF211310 bone marrow, from chronic myelogenous leukemia .f 137 to 586 1 to 450   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 450/450
(100 %)
1 diff
(99.8 %id)
BU537086 mixed (pool of 40 RNAs) .f 138 to 589 1 to 452       452/458
(98 %)
3 diff
(99.4 %id)
NM_021029.4   .f 138 to 588 1 to 451   RefSeq, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 451/451
(100 %)
0 diff
(100 %id)
BP871977 embryonal kidney .f 148 to 521 1 to 374       374/374
(100 %)
0 diff
(100 %id)
BU935031 mixed (pool of 40 RNAs) .f 149 to 586 1 to 438       438/444
(98 %)
4 diff
(99.1 %id)
BP872108 embryonal kidney .f 152 to 489 1 to 338       338/338
(100 %)
0 diff
(100 %id)
BP872620 embryonal kidney .f 159 to 511 1 to 353       353/353
(100 %)
0 diff
(100 %id)
BC062219 Pooled, 40 cell lines .f 161 to 586 5 to 430   available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 426/428
(99 %)
1 diff
(99.8 %id)
BF667957 brain, primitive neuroectoderm .f 162 to 586 1 to 424   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 424/424
(100 %)
3 diff
(99.3 %id)
BP307841 brain .f 163 to 588 1 to 426   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 426/426
(100 %)
0 diff
(100 %id)
DN917552   .f 171 to 362 192 to 1       192/193
(99 %)
0 diff
(100 %id)
EL951275 eyeball .f 178 to 513 1 to 336       336/336
(100 %)
2 diff
(99.5 %id)
AV728485 hypothalamus .f 179 to 588 1 to 410   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 410/410
(100 %)
2 diff
(99.6 %id)
TI_154182847   .f 181 to 589 92 to 498       407/503
(80 %)
8 diff
(98.5 %id)
BP871723.
matches multiple genes
embryonal kidney .f 183 to 519 1 to 337     also hits gene RPL36AP37 337/337
(100 %)
5 diff
(98.6 %id)
TI_159706500   .f 184 to 588 494 to 90   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 405/1044
(38 %)
0 diff
(100 %id)
BJ998036.
matches multiple genes
Wilms tumor .f 184 to 588 1 to 405     also hits gene RPL36AP37 405/405
(100 %)
4 diff
(99.1 %id)
BP227483   .f 185 to 588 1 to 404   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 404/404
(100 %)
3 diff
(99.3 %id)
CD174230 embryonic stem cells, WA01, passage 38 .f 186 to 588 22 to 424   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 403/424
(95 %)
6 diff
(98.6 %id)
BU563978 mixed (pool of 40 RNAs) .f 186 to 593 1 to 408       408/416
(98 %)
4 diff
(99.1 %id)
BU565386 mixed (pool of 40 RNAs) .f 186 to 594 1 to 410       410/439
(93 %)
4 diff
(99.1 %id)
CB962599 Blood vessels - aorta, basilar and artery .f 186 to 591 1 to 406       406/409
(99 %)
4 diff
(99.1 %id)
TI_149275893   .f 186 to 588 515 to 113   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 403/985
(40 %)
3 diff
(99.7 %id)
BP205481 coronary artery .f 187 to 588 1 to 402   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 402/402
(100 %)
1 diff
(99.8 %id)
DN917413   .f 187 to 401 215 to 1       215/216
(99 %)
0 diff
(100 %id)
BG529875.
matches multiple genes
embryonal carcinoma, testis .f 188 to 586 1 to 399   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 399/401
(99 %)
2 diff
(99.6 %id)
BG533615 Liver .f 188 to 588 1 to 401   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 403/401
(100 %)
3 diff
(99.3 %id)
BG612608 embryonal carcinoma, testis .f 188 to 588 1 to 400   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 400/400
(100 %)
2 diff
(99.5 %id)
BG504049 embryonal carcinoma, testis .f 189 to 911 1 to 724       724/725
(99 %)
6 diff
(99.2 %id)
BP277025 Kidney .f 189 to 588 1 to 400   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 400/400
(100 %)
0 diff
(100 %id)
CB112438 Liver .f 189 to 593 1 to 405       405/405
(100 %)
0 diff
(100 %id)
BM855876 stomach .f 189 to 457 1 to 269       269/269
(100 %)
0 diff
(100 %id)
BP377774 uterus .f 189 to 588 1 to 400   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 400/400
(100 %)
0 diff
(100 %id)
BP380328 uterus .f 189 to 588 1 to 400   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 400/400
(100 %)
1 diff
(99.8 %id)
EB362586 eye, lens .f 190 to 576 387 to 1       387/390
(99 %)
2 diff
(99.5 %id)
BU532720 mixed (pool of 40 RNAs) .f 190 to 591 1 to 402       402/408
(98 %)
4 diff
(99.1 %id)
BU858796 mixed (pool of 40 RNAs) .f 190 to 588 1 to 399   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 399/399
(100 %)
3 diff
(99.3 %id)
BU935478.
matches multiple genes
mixed (pool of 40 RNAs) .f 190 to 589 1 to 400     also hits gene RPL36AP37 400/400
(100 %)
3 diff
(99.3 %id)
CK003815 brain/CNS, Human Brain - Cerebellar Cortex .f 190 to 586 1 to 397   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 397/397
(100 %)
3 diff
(99.3 %id)
DA734549   .f 190 to 588 2 to 400   fully sequenced, capped   399/399
(100 %)
0 diff
(100 %id)
BM782123 myeloma .f 190 to 587 1 to 398       398/398
(100 %)
0 diff
(100 %id)
BP263027.
matches multiple genes
small intestine .f 191 to 588 1 to 398   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 398/398
(100 %)
0 diff
(100 %id)
DA727490.
matches multiple genes
  .f 191 to 588 2 to 400   capped also hits gene RPL36AP37 399/400
(99 %)
3 diff
(99.3 %id)
BG503458 embryonal carcinoma, testis .f 192 to 587 1 to 395   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 395/395
(100 %)
2 diff
(99.5 %id)
BG528827 adenocarcinoma, Prostate .f 192 to 588 1 to 397   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 397/397
(100 %)
1 diff
(99.8 %id)
BG612482.
matches multiple genes
embryonal carcinoma, testis .f 192 to 587 1 to 396   AAA Possibly primed on the genome, locally A rich (20/21 A in genome downstream of last aligned base), also hits gene RPL36AP37 396/396
(100 %)
1 diff
(99.8 %id)
BP197844 adrenal gland .f 193 to 588 1 to 396   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 396/396
(100 %)
0 diff
(100 %id)
BP209866.
matches multiple genes
cerebellum .f 193 to 588 1 to 396   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 396/396
(100 %)
1 diff
(99.8 %id)
BP872674.
matches multiple genes
embryonal kidney .f 193 to 518 8 to 333     also hits gene RPL36AP37 326/326
(100 %)
0 diff
(100 %id)
CB106322.
matches multiple genes
Liver .f 193 to 379 1 to 187     also hits gene RPL36AP37 187/187
(100 %)
0 diff
(100 %id)
CB137944.
matches multiple genes
Liver .f 193 to 553 1 to 361     also hits gene RPL36AP37 361/361
(100 %)
0 diff
(100 %id)
CB120095.
matches multiple genes
Liver .f 193 to 587 1 to 395     also hits gene RPL36AP37 395/395
(100 %)
0 diff
(100 %id)
CB139366.
matches multiple genes
Liver .f 193 to 556 1 to 364     also hits gene RPL36AP37 364/364
(100 %)
0 diff
(100 %id)
BP296326   .f 193 to 588 1 to 396   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 396/396
(100 %)
0 diff
(100 %id)
DA732125.
matches multiple genes
  .f 193 to 588 2 to 397   capped also hits gene RPL36AP37 396/396
(100 %)
2 diff
(99.5 %id)
BP326956.
matches multiple genes
prostata .f 193 to 588 1 to 396   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 396/396
(100 %)
0 diff
(100 %id)
BP334793.
matches multiple genes
salivary gland .f 193 to 588 1 to 396   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 396/396
(100 %)
1 diff
(99.8 %id)
TI_154184949   .f 193 to 589 108 to 504   AAA   397/1007
(39 %)
6 diff
(99.5 %id)
BP374722 umbilical cord .f 193 to 588 1 to 396   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 396/396
(100 %)
0 diff
(100 %id)
DA736082.
matches multiple genes
  .f 194 to 588 2 to 396   capped, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene NIN, RPL36AP37 395/395
(100 %)
0 diff
(100 %id)
DA741724.
matches multiple genes
  .f 194 to 588 2 to 396   capped also hits gene RPL36AP37 395/395
(100 %)
0 diff
(100 %id)
DN914577.
matches multiple genes
  .f 195 to 452 259 to 3     also hits gene RPL36AP37 257/262
(98 %)
0 diff
(100 %id)
TI_57202903.
matches multiple genes
  .f 195 to 588 67 to 460   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 394/460
(85 %)
6 diff
(98.7 %id)
CR611948.
matches multiple genes
Neuroblastoma Cot 50-normalized .f 200 to 589 1 to 390     also hits gene RPL36AP37 390/390
(100 %)
0 diff
(100 %id)
TI_157603341   .f 200 to 593 509 to 116   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 394/508
(77 %)
6 diff
(98.9 %id)
DN912412.
matches multiple genes
  .f 201 to 452 253 to 3     also hits gene RPL36AP37 251/254
(98 %)
0 diff
(100 %id)
BE252780.
matches multiple genes
eye, retinoblastoma .f 202 to 586 1 to 385     also hits gene RPL36AP37 385/385
(100 %)
0 diff
(100 %id)
BF203568 muscle, rhabdomyosarcoma .f 202 to 588 1 to 386   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 386/386
(100 %)
3 diff
(99.3 %id)
BQ581332.
matches multiple genes
insulinoma, Pancreas .f 202 to 566 1 to 365   fully sequenced, also hits gene RPL36AP37 365/370
(98 %)
5 diff
(98.7 %id)
BU579577.
matches multiple genes
insulinoma, Pancreas .f 202 to 566 1 to 365   fully sequenced, also hits gene RPL36AP37 365/370
(98 %)
5 diff
(98.7 %id)
TI_57179775   .f 202 to 593 68 to 459   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 392/459
(85 %)
6 diff
(98.7 %id)
TI_57192122   .f 203 to 588 116 to 501   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 386/386
(100 %)
0 diff
(100 %id)
TI_57192643.
matches multiple genes
  .f 203 to 588 54 to 439   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 386/386
(100 %)
0 diff
(100 %id)
TI_154184828   .f 203 to 588 94 to 478   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 385/411
(93 %)
7 diff
(98.3 %id)
AA301564.
matches multiple genes
aorta .f 204 to 471 1 to 268     also hits gene RPL36AP37 268/268
(100 %)
0 diff
(100 %id)
AA401641.
matches multiple genes
  .f 204 to 583 1 to 378   fully sequenced, also hits gene RPL36AP37 378/378
(100 %)
3 diff
(99.3 %id)
BG030785.
matches multiple genes
breast, mammary adenocarcinoma, cell line .f 204 to 588 1 to 385   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 385/385
(100 %)
0 diff
(100 %id)
TI_59394632.
matches multiple genes
  .f 204 to 588 84 to 468   tiling clone, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 385/385
(100 %)
0 diff
(100 %id)
AY927233.
matches multiple genes
  .f 205 to 555 1 to 351     also hits gene RPL36AP37 351/351
(100 %)
0 diff
(100 %id)
AW161107.
matches multiple genes
brain, frontal lobe .f 205 to 586 1 to 382     Possibly primed on the genome, locally A rich (28/32 A in genome downstream of last aligned base), also hits gene RPL36AP26, RPL36AP37 382/382
(100 %)
0 diff
(100 %id)
CN350171.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .f 207 to 499 1 to 293     also hits gene RPL36AP37 293/293
(100 %)
0 diff
(100 %id)
BF970436 adrenal cortex carcinoma, cell line, adrenal gland .f 207 to 588 1 to 382   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 382/382
(100 %)
0 diff
(100 %id)
CT003197.
matches multiple genes
T-Lymphocytes .f 207 to 588 1 to 382   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 382/382
(100 %)
0 diff
(100 %id)
BF174460.
matches multiple genes
blood .f 208 to 439 1 to 232     also hits gene RPL36AP37 232/232
(100 %)
0 diff
(100 %id)
AA609798 lung, lung carcinoma .f 208 to 588 381 to 1       381/389
(97 %)
4 diff
(99.0 %id)
AA308431.
matches multiple genes
colon .f 209 to 588 1 to 380     also hits gene RPL36AP37 380/380
(100 %)
0 diff
(100 %id)
CN350143.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .f 209 to 589 1 to 381     also hits gene RPL36AP37 381/381
(100 %)
0 diff
(100 %id)
CD673285 eye, Iris .f 209 to 588 1 to 380   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 380/380
(100 %)
0 diff
(100 %id)
AV696866.
matches multiple genes
hepatocellular carcinoma .f 209 to 588 1 to 380   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 380/380
(100 %)
0 diff
(100 %id)
BG251629.
matches multiple genes
adenocarcinoma, cell line, Liver .f 209 to 588 1 to 380   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 380/380
(100 %)
0 diff
(100 %id)
BG743243 skin .f 209 to 588 1 to 379   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 379/379
(100 %)
1 diff
(99.8 %id)
BM919506 pooled pancreas and spleen .f 209 to 593 1 to 385       385/431
(89 %)
2 diff
(99.6 %id)
TI_57221124   .f 209 to 588 63 to 441   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 379/441
(85 %)
7 diff
(98.5 %id)
TI_57182081   .f 209 to 588 26 to 404   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 379/404
(93 %)
7 diff
(98.3 %id)
BP429453   .f 209 to 588 430 to 51   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 380/382
(99 %)
0 diff
(100 %id)
BU070182.
matches multiple genes
insulinoma, Pancreas .f 210 to 588 1 to 379     also hits gene RPL36AP37 379/379
(100 %)
6 diff
(98.5 %id)
AA314662.
matches multiple genes
colon .f 211 to 588 1 to 378     also hits gene RPL36AP37 378/378
(100 %)
0 diff
(100 %id)
AA374662.
matches multiple genes
lung .f 211 to 421 1 to 211     also hits gene RPL36AP37 211/211
(100 %)
0 diff
(100 %id)
AJ713195.
matches multiple genes
bone marrow .f 211 to 540 1 to 330     also hits gene RPL36AP37 330/330
(100 %)
0 diff
(100 %id)
BG925476 cartilage .f 212 to 588 95 to 471   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 377/390
(96 %)
0 diff
(100 %id)
AA315040.
matches multiple genes
colon .f 213 to 588 1 to 376     also hits gene RPL36AP37 376/376
(100 %)
0 diff
(100 %id)
AA384608.
matches multiple genes
thyroid gland .f 213 to 416 1 to 204     also hits gene RPL36AP37 204/204
(100 %)
0 diff
(100 %id)
AY305871   .f 213 to 588 412 to 787   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 376/787
(47 %)
0 diff
(100 %id)
DN913832.
matches multiple genes
  .f 213 to 452 241 to 3     also hits gene RPL36AP37 239/241
(99 %)
0 diff
(100 %id)
AW473234.
matches multiple genes
serous papillary carcinoma, high grade, 2pooled tumors, uterus .f 214 to 588 375 to 1     also hits gene RPL36AP37 375/375
(100 %)
0 diff
(100 %id)
BM313838 insulinoma, Pancreas .f 215 to 570 356 to 1       356/362
(98 %)
2 diff
(99.5 %id)
AA747961 Ewing's sarcoma .f 215 to 560 9 to 354       346/354
(97 %)
0 diff
(100 %id)
BQ752511 Prostate .f 216 to 588 1 to 377   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 377/378
(99 %)
9 diff
(97.7 %id)
F30284.
matches multiple genes
pectoral muscle (after mastectomy) .f 216 to 527 1 to 312     also hits gene RPL36AP37 312/312
(100 %)
0 diff
(100 %id)
AA306864.
matches multiple genes
aorta .f 217 to 530 1 to 314     also hits gene RPL36AP37 314/314
(100 %)
0 diff
(100 %id)
BG059498.
matches multiple genes
nasopharynx, normal epithelium .f 217 to 411 1 to 195     also hits gene RPL36AP37 195/195
(100 %)
0 diff
(100 %id)
AA603378.
matches multiple genes
  .f 220 to 542 1 to 323     also hits gene RPL36AP37 323/323
(100 %)
0 diff
(100 %id)
F33377.
matches multiple genes
pectoral muscle (after mastectomy) .f 220 to 578 1 to 359     also hits gene RPL36AP37 359/359
(100 %)
0 diff
(100 %id)
CR542198.
matches multiple genes
  .f 222 to 539 1 to 318     also hits gene RPL36AP37 318/318
(100 %)
0 diff
(100 %id)
F32525.
matches multiple genes
pectoral muscle (after mastectomy) .f 222 to 574 1 to 353     also hits gene RPL36AP37 353/353
(100 %)
0 diff
(100 %id)
F31553.
matches multiple genes
pectoral muscle (after mastectomy) .f 222 to 550 1 to 329     also hits gene RPL36AP37 329/329
(100 %)
0 diff
(100 %id)
F29570.
matches multiple genes
pectoral muscle (after mastectomy) .f 223 to 523 1 to 301     also hits gene RPL36AP37 301/301
(100 %)
0 diff
(100 %id)
BF229887 colon_est .f 224 to 447 228 to 5       224/268
(83 %)
7 diff
(97.4 %id)
CR617894.
matches multiple genes
Placenta Cot 25-normalized .f 224 to 589 1 to 366     also hits gene RPL36AP37 366/366
(100 %)
0 diff
(100 %id)
BX386914.
matches multiple genes
Neuroblastoma Cot 10-normalized .f 224 to 589 1 to 366     also hits gene RPL36AP37 366/366
(100 %)
0 diff
(100 %id)
BX325714 Placenta Cot 25-normalized .f 224 to 577 355 to 1       355/355
(100 %)
10 diff
(97.2 %id)
BX325715.
matches multiple genes
Placenta Cot 25-normalized .f 224 to 589 1 to 366     also hits gene RPL36AP37 366/366
(100 %)
1 diff
(99.8 %id)
BX338672.
matches multiple genes
Placenta Cot 25-normalized .f 224 to 589 1 to 367     also hits gene RPL36AP37 367/367
(100 %)
4 diff
(99.0 %id)
BX349720.
matches multiple genes
Placenta Cot 25-normalized .f 224 to 589 366 to 1     also hits gene RPL36AP37 366/366
(100 %)
3 diff
(99.2 %id)
BE874329 large cell carcinoma, undifferentiated, lung .f 224 to 591 1 to 368       368/368
(100 %)
0 diff
(100 %id)
TI_57151347   .f 224 to 588 53 to 418   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 366/418
(87 %)
7 diff
(98.4 %id)
BE908110 epithelioid carcinoma, Pancreas .f 228 to 593 1 to 365   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 365/365
(100 %)
1 diff
(99.8 %id)
T41136.
matches multiple genes
ovary .f 229 to 588 360 to 1     also hits gene RPL36AP37 360/360
(100 %)
0 diff
(100 %id)
BE879336.
matches multiple genes
large cell carcinoma, undifferentiated, lung .f 229 to 588 1 to 360   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 360/360
(100 %)
0 diff
(100 %id)
TI_57192550   .f 231 to 594 58 to 421   AAA   364/725
(50 %)
2 diff
(99.8 %id)
BU182099.
matches multiple genes
eye, retinoblastoma .f 233 to 588 1 to 356   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 356/356
(100 %)
0 diff
(100 %id)
F29649.
matches multiple genes
pectoral muscle (after mastectomy) .f 234 to 551 1 to 318     also hits gene RPL36AP37 318/318
(100 %)
0 diff
(100 %id)
CR612724.
matches multiple genes
Neuroblastoma Cot 25-normalized .f 235 to 589 1 to 355     also hits gene RPL36AP37 355/355
(100 %)
0 diff
(100 %id)
BX328438 Neuroblastoma Cot 25-normalized .f 235 to 589 355 to 1       355/355
(100 %)
2 diff
(99.5 %id)
BX331680.
matches multiple genes
Neuroblastoma Cot 25-normalized .f 235 to 589 1 to 355     also hits gene RPL36AP37 355/355
(100 %)
4 diff
(98.9 %id)
BX331681.
matches multiple genes
Neuroblastoma Cot 25-normalized .f 235 to 589 1 to 355     also hits gene RPL36AP37 355/355
(100 %)
17 diff
(95.3 %id)
BX349397.
matches multiple genes
Neuroblastoma Cot 25-normalized .f 235 to 589 1 to 355     also hits gene RPL36AP37 355/355
(100 %)
0 diff
(100 %id)
BX349398.
matches multiple genes
Neuroblastoma Cot 25-normalized .f 235 to 589 1 to 355     also hits gene RPL36AP37 355/355
(100 %)
0 diff
(100 %id)
AA583205.
matches multiple genes
germ cell tumor .f 235 to 588 354 to 1     also hits gene RPL36AP37 354/354
(100 %)
0 diff
(100 %id)
AI275128.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 235 to 589 355 to 1     also hits gene RPL36AP37 355/355
(100 %)
0 diff
(100 %id)
F30303.
matches multiple genes
pectoral muscle (after mastectomy) .f 236 to 522 1 to 287     also hits gene RPL36AP37 287/287
(100 %)
0 diff
(100 %id)
AA308214 colon .f 238 to 593 1 to 356       356/356
(100 %)
0 diff
(100 %id)
BF813877 colon_ins .f 240 to 452 237 to 24     Submitted on the opposite strand 214/248
(86 %)
1 diff
(99.6 %id)
BF813882 colon_ins .f 240 to 452 221 to 10     Submitted on the opposite strand 212/232
(91 %)
2 diff
(99.2 %id)
AA617691.
matches multiple genes
breast .f 240 to 588 349 to 1     also hits gene RPL36AP37 349/349
(100 %)
0 diff
(100 %id)
AI871092 anaplastic oligodendroglioma, brain .f 240 to 593 354 to 1       354/354
(100 %)
0 diff
(100 %id)
AA722456.
matches multiple genes
heart .f 242 to 589 348 to 1     also hits gene RPL36AP37 348/348
(100 %)
0 diff
(100 %id)
AI127223 heart .f 243 to 594 352 to 1       352/352
(100 %)
0 diff
(100 %id)
AA631991.
matches multiple genes
breast .f 246 to 588 343 to 1     also hits gene RPL36AP37 343/343
(100 %)
0 diff
(100 %id)
AA649783.
matches multiple genes
alveolar rhabdomyosarcoma .f 249 to 588 339 to 1     also hits gene RPL36AP37 339/342
(99 %)
1 diff
(99.8 %id)
BE877885.
matches multiple genes
large cell carcinoma, undifferentiated, lung .f 251 to 584 1 to 334     also hits gene RPL36AP37 334/334
(100 %)
0 diff
(100 %id)
F25811.
matches multiple genes
pectoral muscle (after mastectomy) .f 252 to 532 1 to 281     also hits gene RPL36AP37 281/281
(100 %)
0 diff
(100 %id)
BG251399 adenocarcinoma, cell line, Liver .f 260 to 588 1 to 329   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 329/329
(100 %)
0 diff
(100 %id)
TI_57191070   .f 263 to 589 48 to 373       326/897
(36 %)
7 diff
(99.3 %id)
DN918804.
matches multiple genes
  .f 267 to 412 1 to 146     also hits gene RPL36AP37 146/146
(100 %)
0 diff
(100 %id)
AA554420.
matches multiple genes
normal prostatic epithelial cells, Prostate .f 271 to 540 270 to 1     also hits gene RPL36AP37 270/270
(100 %)
1 diff
(99.7 %id)
BF088798.
matches multiple genes
head_neck .f 273 to 522 252 to 3     also hits gene RPL36AP37 250/281
(88 %)
0 diff
(100 %id)
DN918798   .f 277 to 452 178 to 4       175/178
(98 %)
1 diff
(99.5 %id)
AW150895 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 285 to 948 665 to 1   tiling clone,   663/665
(99 %)
11 diff
(98.4 %id)
AI720389.
matches multiple genes
colon .f 300 to 588 289 to 1     also hits gene RPL36AP37 289/289
(100 %)
0 diff
(100 %id)
CN350157.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .f 306 to 587 1 to 282     also hits gene RPL36AP37 282/282
(100 %)
0 diff
(100 %id)
BM701351 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 313 to 588 1 to 276   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 276/276
(100 %)
0 diff
(100 %id)
TI_824942945   .f 321 to 465 33 to 174       142/176
(80 %)
12 diff
(93.2 %id)
AA224797   .f 326 to 522 217 to 19       199/218
(91 %)
7 diff
(96.8 %id)
BM854010 stomach .f 345 to 591 1 to 247       247/247
(100 %)
0 diff
(100 %id)
DN912375   .f 363 to 452 92 to 4       89/92
(96 %)
0 diff
(100 %id)
DN914018   .f 363 to 452 1 to 89       89/92
(96 %)
8 diff
(91.4 %id)
DN914019   .f 363 to 452 92 to 4       89/92
(96 %)
1 diff
(99.0 %id)
DN914042   .f 363 to 452 90 to 2       89/90
(98 %)
0 diff
(100 %id)
DN915028   .f 363 to 452 91 to 3       89/91
(97 %)
0 diff
(100 %id)
DN915527   .f 363 to 452 92 to 4       89/93
(95 %)
0 diff
(100 %id)
DN915908   .f 363 to 452 92 to 4       89/92
(96 %)
0 diff
(100 %id)
DN916713   .f 363 to 452 92 to 4       89/92
(96 %)
0 diff
(100 %id)
DN917666   .f 363 to 452 92 to 4       89/92
(96 %)
0 diff
(100 %id)
DN918005   .f 363 to 452 92 to 4       89/92
(96 %)
0 diff
(100 %id)
DN918323   .f 363 to 452 92 to 4       89/92
(96 %)
0 diff
(100 %id)
DN918435   .f 363 to 452 92 to 4       89/92
(96 %)
0 diff
(100 %id)
DN919046   .f 363 to 452 1 to 89       89/116
(76 %)
7 diff
(94.0 %id)
DN919181   .f 363 to 452 91 to 3       89/91
(97 %)
0 diff
(100 %id)
DN920041   .f 363 to 452 91 to 3       89/91
(97 %)
0 diff
(100 %id)
DN920420   .f 363 to 452 91 to 3       89/91
(97 %)
0 diff
(100 %id)
DN920515   .f 363 to 452 91 to 3       89/91
(97 %)
0 diff
(100 %id)
DN912788   .f 364 to 452 91 to 4       88/91
(96 %)
0 diff
(100 %id)
DN920528   .f 364 to 452 91 to 4       88/91
(96 %)
1 diff
(99.0 %id)
DB366639   .f 368 to 588 221 to 1   fully sequenced,   221/221
(100 %)
0 diff
(100 %id)
BU588687 mixed (pool of 40 RNAs) .f 370 to 585 1 to 216   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 216/216
(100 %)
0 diff
(100 %id)
BF381770 brain, primitive neuroectoderm .f 372 to 583 1 to 212   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 212/214
(99 %)
1 diff
(99.6 %id)
AV764536 bone marrow .f 372 to 588 1 to 217   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 217/217
(100 %)
0 diff
(100 %id)
CF528555 placenta .f 381 to 593 230 to 18   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 213/213
(100 %)
0 diff
(100 %id)
CN350151 embryonic stem cells, DMSO-treated H9 cellline .f 401 to 593 1 to 193   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 193/193
(100 %)
0 diff
(100 %id)
BM759704 stomach .g 1 to 547 1 to 547 exact tiling clone,   547/547
(100 %)
0 diff
(100 %id)
BP245286 Kidney .g 27 to 520 1 to 494       494/494
(100 %)
7 diff
(98.6 %id)
CD673333 eye, Iris .g 42 to 691 1 to 650   tiling clone,   650/650
(100 %)
0 diff
(100 %id)
AA878684 2 pooled tumors (clear cell type), Kidney .g 233 to 590 357 to 1       357/357
(100 %)
1 diff
(99.8 %id)
BE827345 lung_tumor .g 239 to 459 1 to 217       217/217
(100 %)
7 diff
(96.8 %id)
BG531719 embryonal carcinoma, testis .h 1 to 439 1 to 438 G24E K25S R26G R27V Y28M ... tiling clone,   438/470
(93 %)
3 diff
(99.4 %id)
DA523813 brain .i 1 to 573 2 to 575 R39X R40A Y41L D42* tiling clone, capped   574/574
(100 %)
3 diff
(99.5 %id)
DA785578 brain .i 1 to 566 2 to 570 R39X R40A Y41L D42* capped   569/569
(100 %)
7 diff
(98.8 %id)
DA966908 stomach .i 3 to 575 2 to 575 R39X R40A Y41L D42* capped   574/574
(100 %)
2 diff
(99.7 %id)
DN912446   .i 6 to 97 92 to 1       92/93
(98 %)
1 diff
(99.0 %id)
DA530036 brain .i 7 to 609 2 to 604 exact tiling clone, capped   603/603
(100 %)
0 diff
(100 %id)
BM836296 stomach .i 11 to 113 1 to 103       103/103
(100 %)
0 diff
(100 %id)
EC575387 Prostate .i 13 to 124 1 to 112       112/112
(100 %)
0 diff
(100 %id)
EC524210 Prostate .i 16 to 126 1 to 111       111/111
(100 %)
0 diff
(100 %id)
EC583677 Prostate .i 16 to 126 1 to 111       111/111
(100 %)
0 diff
(100 %id)
EC486388 Prostate .i 18 to 127 1 to 110       110/110
(100 %)
0 diff
(100 %id)
EC496049 Prostate .i 20 to 131 1 to 112       112/112
(100 %)
0 diff
(100 %id)
EC449242 Prostate .i 22 to 131 1 to 110       110/110
(100 %)
0 diff
(100 %id)
EC477706 Prostate .i 22 to 131 1 to 110       110/110
(100 %)
0 diff
(100 %id)
EC490583 Prostate .i 22 to 131 1 to 110       110/110
(100 %)
0 diff
(100 %id)
EC522998 Prostate .i 22 to 128 1 to 107       107/107
(100 %)
0 diff
(100 %id)
EC540412 Prostate .i 22 to 131 1 to 110       110/110
(100 %)
0 diff
(100 %id)
EC549136 Prostate .i 22 to 131 1 to 110       110/110
(100 %)
0 diff
(100 %id)
EC563363 Prostate .i 22 to 131 1 to 110       110/110
(100 %)
0 diff
(100 %id)
EC564623 Prostate .i 22 to 131 1 to 110       110/110
(100 %)
0 diff
(100 %id)
EC579389 Prostate .i 22 to 131 1 to 110       110/110
(100 %)
0 diff
(100 %id)
AA090481   .i 24 to 209 1 to 185       185/234
(79 %)
2 diff
(99.2 %id)
BF173203 blood .i 24 to 212 1 to 196       196/202
(97 %)
14 diff
(93.1 %id)
EC470293 Prostate .i 24 to 137 1 to 114       114/114
(100 %)
0 diff
(100 %id)
EC558740 Prostate .i 26 to 139 1 to 114       114/114
(100 %)
0 diff
(100 %id)
EC530545 Prostate .i 28 to 143 1 to 116       116/116
(100 %)
0 diff
(100 %id)
EC471067 Prostate .i 37 to 127 22 to 111       90/111
(81 %)
6 diff
(94.6 %id)
AW440686 Kidney .i 37 to 212 188 to 12       177/196
(90 %)
4 diff
(98.0 %id)
EC441343 Prostate .i 51 to 164 1 to 114       114/114
(100 %)
4 diff
(96.5 %id)
F31717 pectoral muscle (after mastectomy) .i 71 to 208 1 to 138       138/138
(100 %)
0 diff
(100 %id)
ES316074.
matches multiple genes
pool of melanoma cell lines .i 143 to 201 1 to 59   tiling clone, also hits gene dawmyby, RPL36AP37 59/59
(100 %)
0 diff
(100 %id)
CB130396 Liver .j 1 to 435 1 to 436 exact tiling clone,   434/436
(99 %)
2 diff
(99.6 %id)
DT215156 brain .k 1 to 664 2 to 664 exact tiling clone,   664/664
(100 %)
1 diff
(99.9 %id)
DA558358   .k 1 to 571 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
AK096711 placenta .k 26 to 2265 1 to 2241 exact tiling clone, available from FLJ,   2241/2241
(100 %)
1 diff
(100.0 %id)
DA839483 placenta .k 27 to 588 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DB249914 uterus .k 27 to 577 2 to 552 K28E capped   551/551
(100 %)
2 diff
(99.7 %id)
BP226344   .k 30 to 612 1 to 583 exact     583/583
(100 %)
2 diff
(99.7 %id)
DA024466   .k 31 to 607 2 to 578 exact capped   577/577
(100 %)
1 diff
(99.9 %id)
CB112113 Liver .k 31 to 589 1 to 559 R8C     559/559
(100 %)
1 diff
(99.9 %id)
DA736070   .k 31 to 955 2 to 931 exact capped   930/930
(100 %)
17 diff
(98.2 %id)
DB130228 thymus .k 31 to 598 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA920997 small intestine .k 32 to 607 2 to 577 exact capped   576/576
(100 %)
0 diff
(100 %id)
DA780309 brain .k 45 to 611 2 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
CR601778 Placenta Cot 25-normalized .k 61 to 1463 1 to 1403       1403/1403
(100 %)
0 diff
(100 %id)
BX397695 Placenta Cot 25-normalized .k 61 to 1003 1 to 940   fully sequenced,   940/940
(100 %)
1 diff
(99.9 %id)
CN394017 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k 76 to 838 1 to 763       763/763
(100 %)
3 diff
(99.7 %id)
CN292331 embryonic stem cells, DMSO-treated H9 cellline .k 217 to 815 1 to 599       599/599
(100 %)
0 diff
(100 %id)
CV415291 colon_ins .k 306 to 665 1 to 365       365/365
(100 %)
21 diff
(94.3 %id)
BG285184 adenocarcinoma, cell line, Prostate .k 757 to 1539 1 to 765       765/914
(83 %)
19 diff
(98.0 %id)
BX397694 Placenta Cot 25-normalized .k 973 to 1464 486 to 1   fully sequenced,   486/486
(100 %)
7 diff
(98.6 %id)
CD673385 eye, lens .k 1975 to 2581 619 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 603/603
(100 %)
3 diff
(99.6 %id)
GD146656   .k 2013 to 2144 1 to 132   AAA   132/132
(100 %)
1 diff
(99.3 %id)
DB368499   .k 2187 to 2735 548 to 1   tiling clone,   548/548
(100 %)
21 diff
(96.2 %id)
CD639115.
matches multiple genes
pooled .l 1 to 280 1 to 280 exact tiling clone, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene RPL36AP37 280/280
(100 %)
3 diff
(99.0 %id)
AJ705811 bone marrow .l 39 to 280 28 to 269       242/269
(89 %)
6 diff
(97.8 %id)
DA374871 thalamus .m 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DB040760 testis .m 1 to 552 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
AA313728 colon .m 20 to 464 1 to 445       445/445
(100 %)
0 diff
(100 %id)
BP247940 Kidney .m 99 to 681 1 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
BG615807 embryonal carcinoma, testis .m 299 to 807 1 to 519   tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 519/519
(100 %)
15 diff
(97.2 %id)
DA045504 bladder .n-u 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
DA042021 bladder .n-u 17 to 594 2 to 579 exact tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
DA947045 Spleen .n-u 18 to 575 2 to 559 exact capped   558/558
(100 %)
0 diff
(100 %id)
DA946692 Spleen .n-u 21 to 593 2 to 574 exact capped   573/573
(100 %)
1 diff
(99.9 %id)
DA952523 Spleen .n-u 21 to 588 2 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
DA952859 Spleen .n-u 21 to 582 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DB045482 testis .n-u 21 to 582 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
TI_57151988   .n-u 31 to 735 70 to 783 I15S F16L P17S L19P R20S ...     714/1036
(68 %)
33 diff
(96.9 %id)
BI763097 pooled colon, kidney, stomach .n-u 34 to 735 1 to 711 I15S F16L P17S L19P R20S ... tiling clone,   711/964
(73 %)
33 diff
(96.6 %id)
BP340853 stomach mucosa .o 1 to 580 1 to 580 exact tiling clone,   580/580
(100 %)
0 diff
(100 %id)
DA838877 placenta .p 1 to 558 5 to 562 exact tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
DB271131 uterus .q 1 to 244 2 to 245 exact tiling clone, capped   244/244
(100 %)
1 diff
(99.6 %id)
DA558204   .q 2 to 547 2 to 548 V4S K6* tiling clone, capped   547/547
(100 %)
1 diff
(99.9 %id)
CN394018 embryonic stem cells, DMSO-treated H9 cellline .r-u 1 to 515 1 to 515 exact tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 515/515
(100 %)
0 diff
(100 %id)
BF055184 pooled .r-u 16 to 516 505 to 5 exact     501/505
(99 %)
0 diff
(100 %id)
AA702085 pineal gland .r-u 35 to 516 482 to 1 exact     482/482
(100 %)
0 diff
(100 %id)
AA988304 breast .r-u 65 to 515 451 to 1 exact     451/451
(100 %)
0 diff
(100 %id)
AI874220 serous papillary carcinoma, high grade, 2pooled tumors, uterus .r-u 107 to 516 410 to 1 exact     410/410
(100 %)
0 diff
(100 %id)
BP419087 small intestine .s 1 to 373 1 to 373 exact tiling clone, Submitted on the opposite strand 373/377
(98 %)
1 diff
(99.8 %id)
BP431989   .t 1 to 268 5 to 272 exact tiling clone,   272/272
(100 %)
5 diff
(98.2 %id)
DC312555 alzheimer cortex Gene RPL36AandHNRNPH2, variant not shown         Suspected internal deletion, this clone was ignored    
DC359661   Gene RPL36AandHNRNPH2, variant not shown         Suspected internal deletion, this clone was ignored    
AK294144 alzheimer cortex Gene RPL36AandHNRNPH2, variant not shown         Suspected internal deletion, this clone was ignored    
AK298133   Gene RPL36AandHNRNPH2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d-u, .e-u, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p, .q, .r-u, .s, .t Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI