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Gene HLA-DRB1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
416 representative clones for gene HLA-DRB1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM924494 pooled colon, kidney, stomach HLA-DRB1.a 1 to 858 1 to 863 L6F T13A S29A W38E P40V ... tiling clone,   863/1030
(83 %)
47 diff
(95.5 %id)
BQ062035 lymph, lymphoma, cell line HLA-DRB1.a 2 to 861 1 to 863 L6F T13A S29A W38E P40V ... tiling clone, AAA   863/1014
(85 %)
40 diff
(96.1 %id)
BF820545.
matches multiple genes
kidney_tumor HLA-DRB1.a 347 to 850 1 to 505   tiling clone, also hits gene HLA-DRB5 505/505
(100 %)
30 diff
(94.1 %id)
AK291987 small intestine HLA-DRB1.b 1 to 1224 5 to 1228 S29A F76Y I96F Q99D A100R ...     1228/1228
(100 %)
8 diff
(99.4 %id)
DA924254 small intestine HLA-DRB1.b 1 to 576 5 to 580   capped   579/579
(100 %)
8 diff
(98.7 %id)
DA619689   HLA-DRB1.b 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
CD686824 normal nasopharynx HLA-DRB1.b 7 to 570 22 to 585       564/585
(96 %)
8 diff
(98.7 %id)
CD695946 normal nasopharynx HLA-DRB1.b 14 to 539 29 to 555       527/555
(94 %)
6 diff
(99.0 %id)
CD251393 brain, Pituitary HLA-DRB1.b 15 to 844 1 to 830       830/830
(100 %)
45 diff
(94.6 %id)
BF967522 brain, hypothalamus HLA-DRB1.b 23 to 741 1 to 716       716/916
(78 %)
21 diff
(97.8 %id)
BI598829 brain, hypothalamus HLA-DRB1.b 23 to 928 1 to 903 S29A S71I F76Y I96F Q99D ...     903/903
(100 %)
34 diff
(96.3 %id)
BI603220 brain, hypothalamus HLA-DRB1.b 23 to 848 1 to 830       830/898
(92 %)
22 diff
(97.6 %id)
BM767002.
matches multiple genes
stomach HLA-DRB1.b 25 to 366 1 to 342     also hits gene HLA-DRB5 342/342
(100 %)
19 diff
(94.5 %id)
BM822020 stomach HLA-DRB1.b 25 to 438 1 to 415       415/415
(100 %)
26 diff
(93.8 %id)
BM830612 stomach HLA-DRB1.b 25 to 460 1 to 435       435/443
(98 %)
26 diff
(94.2 %id)
BM832312.
matches multiple genes
stomach HLA-DRB1.b 25 to 344 1 to 322     also hits gene HLA-DRB5 322/322
(100 %)
22 diff
(93.2 %id)
DB477006 hippocampus HLA-DRB1.b 26 to 513 1 to 488       488/488
(100 %)
10 diff
(98.0 %id)
DA422027 cervix HLA-DRB1.b 27 to 607 2 to 583   capped   582/582
(100 %)
5 diff
(99.2 %id)
AK225690 synovial membrane (knee) HLA-DRB1.b 28 to 1831 1 to 1810 K5R T13A A14V A27P S29A ... tiling clone,   1810/1810
(100 %)
75 diff
(95.9 %id)
AK289463 cerebellum HLA-DRB1.b 28 to 1026 1 to 999 S29A P40L R42F F55L D57E ...     999/999
(100 %)
35 diff
(96.5 %id)
DT215397.
matches multiple genes
brain HLA-DRB1.b 28 to 270 1 to 243     also hits gene HLA-DRB5 243/243
(100 %)
22 diff
(91.0 %id)
DB493671 hypothalamus HLA-DRB1.b 28 to 540 1 to 513       513/513
(100 %)
9 diff
(98.3 %id)
BJ996741 hepatoblastoma HLA-DRB1.b 28 to 588 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
TI_45213130   HLA-DRB1.b 28 to 928 128 to 1025 S29A S71I F76Y I96F Q99D ...     898/1025
(87 %)
35 diff
(96.6 %id)
TI_45214693   HLA-DRB1.b 28 to 848 90 to 914       825/982
(84 %)
23 diff
(97.7 %id)
BM833422.
matches multiple genes
stomach HLA-DRB1.b 28 to 460 1 to 433     also hits gene HLA-DRB5 433/434
(99 %)
43 diff
(90.1 %id)
DA420297 cervix HLA-DRB1.b 29 to 478 2 to 451   capped   450/450
(100 %)
0 diff
(100 %id)
DA560840 heart HLA-DRB1.b 29 to 585 2 to 559   capped   558/558
(100 %)
4 diff
(99.3 %id)
BG542539 lung HLA-DRB1.b 29 to 848 1 to 820       820/860
(95 %)
60 diff
(93.1 %id)
DA620202   HLA-DRB1.b 29 to 627 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA620818   HLA-DRB1.b 29 to 615 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
DA932887 Spleen HLA-DRB1.b 29 to 518 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
DA943927 Spleen HLA-DRB1.b 29 to 595 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA949975 Spleen HLA-DRB1.b 29 to 539 2 to 513   capped   512/512
(100 %)
1 diff
(99.9 %id)
DA953158 Spleen HLA-DRB1.b 29 to 577 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA954557 Spleen HLA-DRB1.b 29 to 573 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB104009 thymus HLA-DRB1.b 29 to 576 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DB130002 thymus HLA-DRB1.b 29 to 595 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB245392 uterus, tumor tissue HLA-DRB1.b 29 to 581 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
X03069   HLA-DRB1.b 29 to 1210 1 to 1182 S29A P40L R42F F55L D57E ...     1182/1182
(100 %)
38 diff
(96.8 %id)
CD708642 normal nasopharynx HLA-DRB1.b 30 to 490 15 to 477       463/477
(97 %)
7 diff
(98.6 %id)
BI227180 Burkitt lymphoma, lymph HLA-DRB1.b 30 to 860 1 to 834       834/886
(94 %)
69 diff
(92.3 %id)
BM822028.
matches multiple genes
stomach HLA-DRB1.b 30 to 410 1 to 381     also hits gene HLA-DRB5 381/381
(100 %)
42 diff
(89.0 %id)
DA620284   HLA-DRB1.b 31 to 626 2 to 597   capped   596/596
(100 %)
3 diff
(99.5 %id)
DB104078 thymus HLA-DRB1.b 31 to 585 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA433301 cord Blood HLA-DRB1.b 32 to 573 2 to 543   capped   542/542
(100 %)
8 diff
(98.6 %id)
BG402495 Kidney HLA-DRB1.b 33 to 539 1 to 507       507/507
(100 %)
1 diff
(99.9 %id)
BG547882.
matches multiple genes
lung HLA-DRB1.b 33 to 675 1 to 645     also hits gene HLA-DRB5 645/839
(76 %)
64 diff
(92.4 %id)
BM737963.
matches multiple genes
Ascites, stomach HLA-DRB1.b 35 to 159 1 to 124     also hits gene HLA-DRB5 124/124
(100 %)
7 diff
(94.4 %id)
BC108922 PCR rescued clones HLA-DRB1.b 36 to 1153 1 to 1119 V115G T119A     1119/1119
(100 %)
10 diff
(99.2 %id)
TI_57201838   HLA-DRB1.b 37 to 742 23 to 728       706/728
(96 %)
14 diff
(98.1 %id)
BG538060.
matches multiple genes
lung HLA-DRB1.b 39 to 744 1 to 719     also hits gene HLA-DRB5 717/752
(95 %)
73 diff
(90.3 %id)
M33600   HLA-DRB1.b 40 to 1210 20 to 1191 S29A P40L R42F F55L D57E ...     1172/1191
(98 %)
45 diff
(96.3 %id)
BG754427 B-cells, primary B-cells from tonsils (cell line) HLA-DRB1.b 41 to 851 1 to 806       806/809
(99 %)
44 diff
(94.6 %id)
BM007713 Spleen HLA-DRB1.b 41 to 109 1 to 69       69/69
(100 %)
1 diff
(98.6 %id)
BM822809 stomach HLA-DRB1.b 41 to 621 1 to 582       582/582
(100 %)
44 diff
(92.5 %id)
AV706082 adrenal gland HLA-DRB1.b 42 to 621 10 to 590       581/591
(98 %)
13 diff
(97.9 %id)
TI_59382673   HLA-DRB1.b 42 to 752 57 to 767       711/713
(99 %)
45 diff
(93.7 %id)
TI_59382946   HLA-DRB1.b 42 to 979 64 to 1010 Y59H Q165R E166K E167R K168R ...     947/949
(99 %)
33 diff
(96.6 %id)
BQ064360 lymph, lymphoma, cell line HLA-DRB1.b 43 to 936 1 to 902 S29A P40L R42F F55L D57E ...     902/989
(91 %)
53 diff
(94.7 %id)
BQ708869 Spleen HLA-DRB1.b 43 to 951 1 to 914 Y59H N252D L259T F264I L265P ...     914/914
(100 %)
16 diff
(98.3 %id)
BQ707995 Spleen HLA-DRB1.b 43 to 736 1 to 698       698/941
(74 %)
11 diff
(98.9 %id)
BG106561.
matches multiple genes
lymph, lymphoma, cell line HLA-DRB1.b 44 to 336 57 to 349     also hits gene HLA-DRB5 293/349
(83 %)
21 diff
(94.0 %id)
BI822085 pooled brain, lung, testis HLA-DRB1.b 44 to 742 1 to 699       699/699
(100 %)
9 diff
(98.8 %id)
TI_57235346   HLA-DRB1.b 44 to 710 27 to 694       668/694
(96 %)
6 diff
(99.2 %id)
BM457748 lymph, lymphoma, cell line HLA-DRB1.b 45 to 878 1 to 836       834/914
(91 %)
54 diff
(94.1 %id)
BQ642821 lymph, lymphoma, cell line HLA-DRB1.b 45 to 1030 1 to 992 S29A P40L R42F F55L D57E ...     992/1004
(98 %)
60 diff
(94.1 %id)
BI771140 pooled lung and spleen HLA-DRB1.b 46 to 854 1 to 814       814/874
(93 %)
12 diff
(98.7 %id)
TI_57179258   HLA-DRB1.b 46 to 854 31 to 844       814/904
(90 %)
18 diff
(98.1 %id)
TI_154143292   HLA-DRB1.b 46 to 615 75 to 645       571/571
(100 %)
34 diff
(94.1 %id)
AB062112   HLA-DRB1.b 47 to 903 1 to 857 K5R T13A A14V S29A W38E ...     857/858
(99 %)
32 diff
(96.3 %id)
BG758797 B-cells, primary B-cells from tonsils (cell line) HLA-DRB1.b 47 to 854 1 to 809       809/931
(86 %)
45 diff
(95.2 %id)
BI909284 leukocyte HLA-DRB1.b 47 to 710 1 to 665       665/665
(100 %)
1 diff
(99.9 %id)
BQ062748 lymph, lymphoma, cell line HLA-DRB1.b 47 to 1007 1 to 969 S29A P40L R42F F55L D57E ...     969/1015
(95 %)
62 diff
(93.9 %id)
BC033827 Blood, adult leukocytes HLA-DRB1.b 48 to 1210 1 to 1163 exact tiling clone, available from MGC, AAA   1163/1163
(100 %)
0 diff
(100 %id)
EL946969 eyeball HLA-DRB1.b 48 to 394 8 to 354       347/355
(97 %)
13 diff
(96.4 %id)
BM458634.
matches multiple genes
lymph, lymphoma, cell line HLA-DRB1.b 48 to 854 1 to 808     also hits gene HLA-DRB5 808/1127
(71 %)
53 diff
(95.3 %id)
BM477368.
matches multiple genes
lymph, lymphoma, cell line HLA-DRB1.b 48 to 852 1 to 812     also hits gene HLA-DRB5 812/1101
(73 %)
62 diff
(94.4 %id)
BM477509.
matches multiple genes
lymph, lymphoma, cell line HLA-DRB1.b 48 to 852 13 to 826     also hits gene HLA-DRB5 814/1018
(79 %)
74 diff
(92.8 %id)
TI_57196096   HLA-DRB1.b 48 to 712 35 to 700       666/700
(95 %)
29 diff
(95.9 %id)
M20430   HLA-DRB1.b 48 to 1206 1 to 1158 exact     1158/1158
(100 %)
1 diff
(100.0 %id)
NM_002124.2   HLA-DRB1.b 48 to 1210 1 to 1163 exact RefSeq, AAA   1163/1163
(100 %)
0 diff
(100 %id)
BM923920 pooled colon, kidney, stomach HLA-DRB1.b 49 to 1022 1 to 982 L6F T13A S29A W38E P40V ...     982/985
(99 %)
63 diff
(93.7 %id)
CD516623 White Matter HLA-DRB1.b 49 to 764 1 to 721       721/780
(92 %)
42 diff
(94.7 %id)
T84211 liver and spleen HLA-DRB1.b 50 to 382 1 to 333       333/333
(100 %)
5 diff
(98.5 %id)
BI912342 leukocyte HLA-DRB1.b 50 to 870 1 to 830       830/956
(86 %)
24 diff
(97.5 %id)
TI_57197942   HLA-DRB1.b 50 to 756 28 to 734       707/734
(96 %)
13 diff
(98.3 %id)
TI_57149446   HLA-DRB1.b 50 to 834 35 to 823       789/824
(95 %)
26 diff
(96.9 %id)
TI_57235689   HLA-DRB1.b 50 to 870 1 to 830       830/956
(86 %)
24 diff
(97.5 %id)
AK226058 brain HLA-DRB1.b 51 to 1210 1 to 1159 K5R T13A A14V S29A W38E ... AAA   1159/1159
(100 %)
46 diff
(96.1 %id)
AW404637.
matches multiple genes
lymph HLA-DRB1.b 51 to 454 7 to 410     also hits gene HLA-DRB5 404/410
(98 %)
33 diff
(92.0 %id)
BF795653.
matches multiple genes
lymph, lymphoma, cell line HLA-DRB1.b 51 to 336 1 to 286     also hits gene HLA-DRB5 286/286
(100 %)
24 diff
(91.7 %id)
BI821265 pooled brain, lung, testis HLA-DRB1.b 51 to 756 1 to 706       706/706
(100 %)
8 diff
(98.9 %id)
BI759443 pooled colon, kidney, stomach HLA-DRB1.b 51 to 834 1 to 788       788/789
(99 %)
21 diff
(97.4 %id)
L76133 blood HLA-DRB1.b 51 to 903 1 to 853 K5R T13A A14V S29A W38E ...     853/853
(100 %)
30 diff
(96.5 %id)
NM_022555.3   HLA-DRB1.b 51 to 1210 1 to 1158 C11S M12L T13A P25R L28F ... RefSeq,   1158/1158
(100 %)
67 diff
(94.3 %id)
TI_154141601.
matches multiple genes
  HLA-DRB1.b 51 to 742 80 to 765     also hits gene HLA-DRB5 686/762
(90 %)
78 diff
(89.8 %id)
U65585 blood HLA-DRB1.b 51 to 903 1 to 853 K5R T13A A14V S29A W38E ...     853/853
(100 %)
33 diff
(96.2 %id)
BP422878 small intestine HLA-DRB1.b 52 to 500 1 to 449     Submitted on the opposite strand 449/449
(100 %)
24 diff
(94.7 %id)
BM459340 lymph, lymphoma, cell line HLA-DRB1.b 52 to 724 1 to 680       680/981
(69 %)
61 diff
(93.8 %id)
M28583   HLA-DRB1.b 52 to 1084 1 to 1033 S29A F76Y I96F Q99D A100R ...     1033/1033
(100 %)
8 diff
(99.3 %id)
H70000 liver and spleen HLA-DRB1.b 53 to 382 1 to 331       331/331
(100 %)
5 diff
(98.5 %id)
BQ065636 lymph, lymphoma, cell line HLA-DRB1.b 55 to 1010 1 to 969 S29A P40L R42F F55L D57E ...     969/1007
(96 %)
60 diff
(94.1 %id)
BM822397 stomach HLA-DRB1.b 55 to 166 1 to 112       112/112
(100 %)
5 diff
(95.6 %id)
M20504   HLA-DRB1.b 56 to 1094 1 to 1039 S29A F76Y I96L Q99D A100R ...     1039/1039
(100 %)
8 diff
(99.3 %id)
TI_2194700168   HLA-DRB1.b 57 to 1061 1074 to 73 K5R T13A A14V S29A W38Q ...     1002/1297
(77 %)
42 diff
(96.8 %id)
CA976183 sciatic nerve HLA-DRB1.b 57 to 904 1 to 857 Y59H S196K G197W E198R V199G ...     855/862
(99 %)
13 diff
(98.5 %id)
BQ066798 lymph, lymphoma, cell line HLA-DRB1.b 58 to 1045 1 to 1002 S29A P40L R42F F55L D57E ...     1000/1014
(98 %)
59 diff
(94.2 %id)
BG757429 B-cells, primary B-cells from tonsils (cell line) HLA-DRB1.b 60 to 845 1 to 789       789/920
(85 %)
44 diff
(95.3 %id)
BQ711480 Spleen HLA-DRB1.b 60 to 886 1 to 830       830/864
(96 %)
15 diff
(98.3 %id)
BM822833 stomach HLA-DRB1.b 60 to 430 1 to 371       371/371
(100 %)
33 diff
(91.2 %id)
BG754614 B-cells, primary B-cells from tonsils (cell line) HLA-DRB1.b 61 to 871 1 to 809       809/809
(100 %)
43 diff
(94.7 %id)
TI_151767164   HLA-DRB1.b 61 to 705 175 to 832       658/682
(96 %)
54 diff
(92.1 %id)
CA392848 eye, RPE/choroid HLA-DRB1.b 65 to 546 1 to 482       482/482
(100 %)
7 diff
(98.6 %id)
TI_2194699930   HLA-DRB1.b 67 to 1061 1059 to 68 K5R T13A A14V S29A W38Q ...     992/1249
(79 %)
43 diff
(96.6 %id)
BU599567.
matches multiple genes
mixed (pool of 40 RNAs) HLA-DRB1.b 68 to 852 1 to 790     also hits gene HLA-DRB5 790/801
(98 %)
66 diff
(91.8 %id)
EL955021 eyeball HLA-DRB1.b 69 to 622 1 to 552       552/552
(100 %)
35 diff
(93.7 %id)
AV692562 hepatocellular carcinoma HLA-DRB1.b 76 to 728 1 to 648       648/648
(100 %)
34 diff
(94.8 %id)
BI763762 pooled colon, kidney, stomach HLA-DRB1.b 77 to 658 1 to 582       582/582
(100 %)
28 diff
(95.2 %id)
L02545 blood HLA-DRB1.b 77 to 902 1 to 826 S29A F76Y I96F Q99D A100R ...     826/826
(100 %)
16 diff
(98.1 %id)
BI770531 pooled lung and spleen HLA-DRB1.b 79 to 996 1 to 924 K5E L6A G8W G9R S10L ...     922/928
(99 %)
19 diff
(98.0 %id)
TI_57183437   HLA-DRB1.b 79 to 996 33 to 956 K5E L6A G8W G9R S10L ...     922/960
(96 %)
24 diff
(97.5 %id)
AJ536121 peripheral blood mononuclear cells HLA-DRB1.b 82 to 891 1 to 810 L6F T13A S29A W38E P40V ...     810/810
(100 %)
31 diff
(96.2 %id)
AJ697892   HLA-DRB1.b 82 to 899 1 to 818 K5R T13A A14V S29A W38E ...     818/818
(100 %)
31 diff
(96.3 %id)
AJ697893   HLA-DRB1.b 82 to 899 1 to 818 K5R T13A A14V S29A W38E ...     818/818
(100 %)
30 diff
(96.4 %id)
DR422288 eye, Pterygium HLA-DRB1.b 82 to 632 1 to 553       553/553
(100 %)
6 diff
(99.0 %id)
M35980.
matches multiple genes
  HLA-DRB1.b 84 to 240 1 to 157     also hits gene HLA-DRB5 157/157
(100 %)
13 diff
(91.8 %id)
X99895   HLA-DRB1.b 84 to 1067 1 to 983 L6F P7X C11X M12X T13X ...     983/983
(100 %)
39 diff
(96.1 %id)
BM914347 Spleen HLA-DRB1.b 86 to 825 1 to 748       748/1077
(69 %)
24 diff
(97.8 %id)
BU899289 Spleen HLA-DRB1.b 88 to 823 23 to 765       740/977
(75 %)
33 diff
(96.7 %id)
AW385385 leiomios HLA-DRB1.b 89 to 549 1 to 460       460/460
(100 %)
47 diff
(89.8 %id)
TI_1948085308   HLA-DRB1.b 89 to 673 129 to 716       588/1422
(41 %)
42 diff
(97.1 %id)
TI_1948085309   HLA-DRB1.b 89 to 742 135 to 788       654/1360
(48 %)
52 diff
(96.2 %id)
TI_1948085467   HLA-DRB1.b 89 to 672 134 to 718       585/1306
(44 %)
45 diff
(96.6 %id)
TI_1948090593   HLA-DRB1.b 89 to 491 127 to 529   fully sequenced,   403/428
(94 %)
6 diff
(98.6 %id)
TI_1948090693   HLA-DRB1.b 89 to 411 128 to 450   fully sequenced,   323/350
(92 %)
6 diff
(98.3 %id)
TI_1948090695   HLA-DRB1.b 89 to 190 125 to 225   fully sequenced,   101/126
(80 %)
6 diff
(95.3 %id)
TI_1948090779   HLA-DRB1.b 89 to 476 129 to 516   fully sequenced,   388/415
(93 %)
6 diff
(98.6 %id)
TI_1948221441   HLA-DRB1.b 89 to 767 125 to 804       680/1385
(49 %)
43 diff
(96.9 %id)
AF291675   HLA-DRB1.b 91 to 891 1 to 801 L6F T13A S29A W38E P40V ...     801/801
(100 %)
30 diff
(96.3 %id)
AJ297582   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
31 diff
(96.2 %id)
AJ297583   HLA-DRB1.b 91 to 878 1 to 788       788/793
(99 %)
30 diff
(96.3 %id)
AJ297584   HLA-DRB1.b 91 to 878 1 to 788       788/793
(99 %)
32 diff
(96.0 %id)
AJ297585   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
31 diff
(96.2 %id)
AJ297586   HLA-DRB1.b 91 to 891 1 to 801 L6F T13A S29A W38E P40V ...     801/801
(100 %)
30 diff
(96.3 %id)
AJ297587   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
28 diff
(96.6 %id)
AY626552   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A S29A W38E P40V ...     801/801
(100 %)
32 diff
(96.1 %id)
AY935719   HLA-DRB1.b 91 to 878 1 to 788       788/796
(98 %)
37 diff
(95.4 %id)
AY961062   HLA-DRB1.b 91 to 891 1 to 801 L6F T13A S29A W38E P40V ...     801/801
(100 %)
30 diff
(96.3 %id)
AY961063   HLA-DRB1.b 91 to 891 1 to 801 L6F T13A S29A W38E P40V ...     801/801
(100 %)
30 diff
(96.3 %id)
AY961064   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
30 diff
(96.3 %id)
AY961065   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
29 diff
(96.4 %id)
AY961066   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
30 diff
(96.3 %id)
AY961067   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
30 diff
(96.3 %id)
AY961068   HLA-DRB1.b 91 to 891 1 to 801 L6F T13A S29A W38E P40V ...     801/801
(100 %)
30 diff
(96.3 %id)
AY961069   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
29 diff
(96.4 %id)
AY961070   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
29 diff
(96.4 %id)
AY961071   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
31 diff
(96.2 %id)
AY961072   HLA-DRB1.b 91 to 891 1 to 801 Y59H     801/801
(100 %)
1 diff
(99.9 %id)
AY961073   HLA-DRB1.b 91 to 891 1 to 801 I96F     801/801
(100 %)
1 diff
(99.9 %id)
AY961074   HLA-DRB1.b 91 to 891 1 to 801 L6F T13A S29A W38E P40V ...     801/801
(100 %)
30 diff
(96.3 %id)
AY961075   HLA-DRB1.b 91 to 891 1 to 801 L6F T13A S29A W38E P40V ...     801/801
(100 %)
31 diff
(96.2 %id)
AY961076   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
31 diff
(96.2 %id)
AY961077   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
32 diff
(96.1 %id)
AY961078   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
31 diff
(96.2 %id)
CV030696 mixed HLA-DRB1.b 91 to 541 1 to 451       451/451
(100 %)
7 diff
(98.5 %id)
DQ002917   HLA-DRB1.b 91 to 891 1 to 801 S29A P40L R42F R54Q D57E ...     801/801
(100 %)
32 diff
(96.1 %id)
DQ090958   HLA-DRB1.b 91 to 891 1 to 801 K5R T13A A14V S29A W38E ...     801/801
(100 %)
32 diff
(96.1 %id)
EL735772 mixed HLA-DRB1.b 91 to 658 1 to 568       568/568
(100 %)
27 diff
(95.3 %id)
M30179   HLA-DRB1.b 91 to 460 1 to 369       369/369
(100 %)
8 diff
(97.9 %id)
AA381523   HLA-DRB1.b 94 to 389 1 to 299       299/299
(100 %)
7 diff
(97.7 %id)
TI_154143174   HLA-DRB1.b 96 to 643 89 to 641       553/891
(62 %)
38 diff
(95.8 %id)
TI_154146851   HLA-DRB1.b 96 to 466 84 to 454       371/428
(86 %)
26 diff
(94.0 %id)
BG007395.
matches multiple genes
placenta_normal HLA-DRB1.b 98 to 460 10 to 374     also hits gene HLA-DRB5 365/392
(93 %)
40 diff
(89.8 %id)
BQ721773 dorsal root ganglia HLA-DRB1.b 99 to 975 1 to 885       885/939
(94 %)
28 diff
(97.1 %id)
AF017440   HLA-DRB1.b 104 to 460 1 to 356       356/356
(100 %)
17 diff
(95.3 %id)
TI_154142732   HLA-DRB1.b 104 to 728 81 to 699       619/620
(99 %)
46 diff
(92.6 %id)
TI_154146468   HLA-DRB1.b 104 to 703 80 to 679       600/600
(100 %)
43 diff
(92.9 %id)
AF490771   HLA-DRB1.b 110 to 871 1 to 762       762/762
(100 %)
28 diff
(96.4 %id)
AW405202 lymph HLA-DRB1.b 120 to 574 1 to 455       455/462
(98 %)
26 diff
(94.4 %id)
M28584   HLA-DRB1.b 120 to 1210 1 to 1091       1091/1091
(100 %)
11 diff
(99.0 %id)
M30180   HLA-DRB1.b 120 to 460 1 to 340       340/340
(100 %)
2 diff
(99.5 %id)
AW405675 lymph HLA-DRB1.b 126 to 446 1 to 321       321/322
(99 %)
13 diff
(96.0 %id)
AA377090 small intestine HLA-DRB1.b 127 to 440 1 to 314       314/316
(99 %)
26 diff
(91.8 %id)
TI_154143108   HLA-DRB1.b 132 to 703 78 to 652       575/576
(99 %)
53 diff
(90.8 %id)
EL955485.
matches multiple genes
eyeball HLA-DRB1.b 135 to 674 1 to 540     also hits gene HLA-DRB5 540/542
(99 %)
30 diff
(94.5 %id)
X99896   HLA-DRB1.b 136 to 1036 1 to 902       902/911
(99 %)
37 diff
(96.0 %id)
AW405866 lymph HLA-DRB1.b 143 to 433 1 to 291       291/293
(99 %)
13 diff
(95.6 %id)
T29203 ovary HLA-DRB1.b 143 to 364 1 to 222       222/222
(100 %)
2 diff
(99.1 %id)
U95820.
matches multiple genes
  HLA-DRB1.b 147 to 582 1 to 436     also hits gene HLA-DRB5 436/436
(100 %)
34 diff
(92.3 %id)
TI_1948090696   HLA-DRB1.b 154 to 878 862 to 136   fully sequenced,   727/862
(84 %)
37 diff
(95.8 %id)
BG535909 lung HLA-DRB1.b 173 to 848 1 to 678       678/720
(94 %)
25 diff
(96.6 %id)
TI_1948102239   HLA-DRB1.b 173 to 877 841 to 137       705/1312
(53 %)
51 diff
(96.2 %id)
TI_45212975   HLA-DRB1.b 174 to 985 180 to 992       813/992
(81 %)
27 diff
(97.3 %id)
AF010142   HLA-DRB1.b 178 to 460 1 to 283       283/285
(99 %)
2 diff
(99.3 %id)
M16957   HLA-DRB1.b 178 to 891 1 to 714       714/714
(100 %)
0 diff
(100 %id)
M16958   HLA-DRB1.b 178 to 447 1 to 270       270/270
(100 %)
3 diff
(98.9 %id)
M16959   HLA-DRB1.b 178 to 891 1 to 714       714/714
(100 %)
11 diff
(98.5 %id)
M17378   HLA-DRB1.b 178 to 891 1 to 714       714/714
(100 %)
1 diff
(99.9 %id)
CK820354 insulinoma, Pancreas HLA-DRB1.b 184 to 735 21 to 571       555/571
(97 %)
17 diff
(97.1 %id)
M14190   HLA-DRB1.b 184 to 456 8 to 282       275/282
(97 %)
6 diff
(97.9 %id)
TI_1948085384   HLA-DRB1.b 184 to 703 225 to 746       526/1263
(41 %)
50 diff
(96.1 %id)
AM056024   HLA-DRB1.b 191 to 460 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
CD691544 normal nasopharynx HLA-DRB1.b 191 to 475 205 to 489       489/489
(100 %)
5 diff
(99.0 %id)
M16732.
matches multiple genes
  HLA-DRB1.b 191 to 458 1 to 268     also hits gene HLA-DRB5 268/268
(100 %)
29 diff
(89.2 %id)
M15071.
matches multiple genes
  HLA-DRB1.b 193 to 460 1 to 267     also hits gene HLA-DRB5 267/267
(100 %)
29 diff
(89.2 %id)
S48645   HLA-DRB1.b 200 to 460 23 to 282       260/282
(92 %)
25 diff
(91.2 %id)
BX437666 thymus HLA-DRB1.b 207 to 1179 972 to 1       972/980
(99 %)
57 diff
(94.2 %id)
AF004817.
matches multiple genes
  HLA-DRB1.b 209 to 450 1 to 242     also hits gene HLA-DRB5 242/242
(100 %)
17 diff
(93.0 %id)
AF017441   HLA-DRB1.b 209 to 516 32 to 363       332/363
(91 %)
10 diff
(97.3 %id)
FJ200455   HLA-DRB1.b 209 to 460 19 to 270       252/270
(93 %)
6 diff
(97.8 %id)
M17382   HLA-DRB1.b 209 to 891 32 to 714       683/714
(95 %)
19 diff
(97.4 %id)
M17383   HLA-DRB1.b 209 to 891 32 to 714       683/714
(95 %)
18 diff
(97.5 %id)
M25265   HLA-DRB1.b 209 to 460 32 to 282       251/282
(89 %)
6 diff
(97.9 %id)
M59803   HLA-DRB1.b 209 to 479 32 to 302       271/304
(89 %)
8 diff
(97.4 %id)
U35375 blood HLA-DRB1.b 209 to 483 32 to 306       275/306
(89 %)
8 diff
(97.4 %id)
U35729 blood HLA-DRB1.b 209 to 483 32 to 306       275/306
(89 %)
8 diff
(97.4 %id)
U37433 blood HLA-DRB1.b 209 to 483 32 to 306       275/306
(89 %)
8 diff
(97.4 %id)
U47028   HLA-DRB1.b 209 to 483 32 to 306       275/306
(89 %)
8 diff
(97.4 %id)
AL553531 placenta, Placenta Cot 25-normalized HLA-DRB1.b 210 to 1024 27 to 832       806/883
(91 %)
41 diff
(95.4 %id)
AF436097.
matches multiple genes
  HLA-DRB1.b 214 to 456 1 to 243     also hits gene HLA-DRB5 243/243
(100 %)
15 diff
(93.9 %id)
U83583   HLA-DRB1.b 217 to 1016 1 to 799       799/799
(100 %)
27 diff
(96.7 %id)
U83584   HLA-DRB1.b 217 to 1015 1 to 798       798/799
(99 %)
30 diff
(96.3 %id)
AW175607 breast HLA-DRB1.b 218 to 776 1 to 559       559/559
(100 %)
0 diff
(100 %id)
TI_1948090782   HLA-DRB1.b 219 to 890 799 to 125       675/1352
(49 %)
37 diff
(97.3 %id)
TI_1948090518   HLA-DRB1.b 220 to 890 803 to 130       674/1345
(50 %)
39 diff
(97.2 %id)
U56640   HLA-DRB1.b 234 to 985 1 to 752       752/752
(100 %)
7 diff
(99.1 %id)
AW367171 head_neck HLA-DRB1.b 253 to 513 261 to 2       260/261
(99 %)
18 diff
(93.2 %id)
S79786.
matches multiple genes
  HLA-DRB1.b 266 to 440 1 to 175     also hits gene HLA-DRB5 175/175
(100 %)
12 diff
(93.2 %id)
BQ638122 eye, retina HLA-DRB1.b 275 to 910 1 to 636       636/636
(100 %)
5 diff
(99.3 %id)
BF810386.
matches multiple genes
colon_ins HLA-DRB1.b 280 to 655 394 to 19     Submitted on the opposite strand, also hits gene HLA-DRB5 376/394
(95 %)
16 diff
(96.0 %id)
TI_1948090596   HLA-DRB1.b 290 to 878 726 to 136       591/1259
(46 %)
32 diff
(97.5 %id)
BM694077 eye, RPE and Choroid HLA-DRB1.b 302 to 679 1 to 378       378/378
(100 %)
0 diff
(100 %id)
BM704633 eye, RPE and Choroid HLA-DRB1.b 302 to 858 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DA261984 caudate nucleus HLA-DRB1.b 306 to 848 2 to 546   capped   545/545
(100 %)
4 diff
(99.3 %id)
AI906336 breast HLA-DRB1.b 320 to 739 420 to 1       420/420
(100 %)
19 diff
(95.5 %id)
TI_154007827   HLA-DRB1.b 325 to 1210 959 to 84   AAA   876/995
(88 %)
24 diff
(97.6 %id)
AW381681 head_neck HLA-DRB1.b 330 to 557 242 to 13       230/262
(87 %)
3 diff
(98.9 %id)
BI027874 marrow HLA-DRB1.b 330 to 599 288 to 20       269/309
(87 %)
9 diff
(97.1 %id)
AF017439   HLA-DRB1.b 352 to 681 1 to 330       330/330
(100 %)
15 diff
(95.5 %id)
CD614096   HLA-DRB1.b 354 to 1096 742 to 1       742/742
(100 %)
25 diff
(96.7 %id)
BG995105 head_neck HLA-DRB1.b 359 to 750 399 to 8       392/399
(98 %)
6 diff
(98.5 %id)
BF878295 lung_tumor HLA-DRB1.b 360 to 594 239 to 6     Submitted on the opposite strand 234/241
(97 %)
15 diff
(93.8 %id)
BG913699 anaplastic oligodendroglioma with 1p/19qloss, brain HLA-DRB1.b 381 to 1133 11 to 772       762/772
(98 %)
21 diff
(97.3 %id)
TI_1948090694   HLA-DRB1.b 381 to 890 635 to 126   fully sequenced,   510/635
(80 %)
1 diff
(99.9 %id)
BG745708 Spleen HLA-DRB1.b 382 to 1062 684 to 5       680/684
(99 %)
4 diff
(99.5 %id)
TI_57163210   HLA-DRB1.b 382 to 1213 32 to 869       809/915
(88 %)
44 diff
(95.2 %id)
BG995486 head_neck HLA-DRB1.b 390 to 737 368 to 22       347/375
(92 %)
0 diff
(100 %id)
BI061011 uterus_tumor HLA-DRB1.b 390 to 838 449 to 1       449/455
(98 %)
16 diff
(96.5 %id)
TI_159693421   HLA-DRB1.b 393 to 1206 905 to 98   AAA   808/1028
(78 %)
43 diff
(95.9 %id)
TI_149311734   HLA-DRB1.b 398 to 1210 902 to 97   AAA   806/960
(83 %)
41 diff
(95.8 %id)
CA431493 Alveolar Macrophage, lung HLA-DRB1.b 399 to 1206 825 to 19   AAA   807/809
(99 %)
35 diff
(95.7 %id)
BG540215 lung HLA-DRB1.b 409 to 1200 1 to 791       789/846
(93 %)
46 diff
(94.6 %id)
AA557703 Prostate, prostatic intraepithelial neoplasia - highgrade HLA-DRB1.b 414 to 643 232 to 1       232/232
(100 %)
9 diff
(96.2 %id)
TI_154044398   HLA-DRB1.b 416 to 1206 856 to 79   AAA   781/890
(87 %)
45 diff
(95.0 %id)
AI635249 adenocarcinoma, Pancreas HLA-DRB1.b 420 to 1210 789 to 1       789/789
(100 %)
25 diff
(96.9 %id)
TI_227713323   HLA-DRB1.b 424 to 1210 855 to 69   AAA   787/1018
(77 %)
35 diff
(96.6 %id)
AI925478 poorly differentiated adenocarcinoma withsignet ring cell features, stomach HLA-DRB1.b 459 to 1207 750 to 1       750/781
(96 %)
31 diff
(96.1 %id)
TI_1948090594   HLA-DRB1.b 459 to 890 557 to 126   fully sequenced,   432/557
(77 %)
0 diff
(100 %id)
TI_1948090780   HLA-DRB1.b 459 to 878 557 to 139   fully sequenced,   419/557
(75 %)
0 diff
(100 %id)
TI_149290721   HLA-DRB1.b 459 to 1206 828 to 87   AAA   742/975
(76 %)
11 diff
(98.9 %id)
TI_154053171   HLA-DRB1.b 459 to 1206 830 to 86   AAA   745/932
(79 %)
34 diff
(96.4 %id)
TI_227713159   HLA-DRB1.b 459 to 1214 832 to 84   AAA   749/1017
(73 %)
39 diff
(96.2 %id)
U09201   HLA-DRB1.b 459 to 584 1 to 126       126/126
(100 %)
7 diff
(94.5 %id)
TI_154124521   HLA-DRB1.b 462 to 1206 842 to 106   AAA   737/957
(77 %)
40 diff
(95.9 %id)
TI_227713019   HLA-DRB1.b 462 to 1210 828 to 85   AAA   744/966
(77 %)
43 diff
(95.6 %id)
BE785272 large cell carcinoma, lung HLA-DRB1.b 464 to 1206 1 to 740       740/962
(76 %)
37 diff
(96.2 %id)
BI018378.
matches multiple genes
marrow HLA-DRB1.b 466 to 842 387 to 12     also hits gene HLA-DRB5 376/391
(96 %)
11 diff
(97.2 %id)
AA858441 colon, colon tumor HLA-DRB1.b 468 to 1212 744 to 1       744/827
(89 %)
41 diff
(95.1 %id)
AW403813 lymph HLA-DRB1.b 468 to 917 1 to 450       450/450
(100 %)
13 diff
(97.2 %id)
AI567982 ovary, tumor, 5 pooled (see description) HLA-DRB1.b 471 to 1198 754 to 27   AAA   728/733
(99 %)
20 diff
(97.3 %id)
CR736506 liver and spleen HLA-DRB1.b 479 to 1206 1 to 728   AAA   728/728
(100 %)
0 diff
(100 %id)
H90941 liver and spleen HLA-DRB1.b 479 to 923 1 to 451       451/451
(100 %)
7 diff
(98.5 %id)
BE166231.
matches multiple genes
head_neck HLA-DRB1.b 481 to 750 282 to 13     Submitted on the opposite strand, also hits gene HLA-DRB5 270/282
(95 %)
0 diff
(100 %id)
AI660611 colon, colonic mucosa from 5 ulcerative colitispatients HLA-DRB1.b 495 to 1129 719 to 87   AAA   633/705
(89 %)
19 diff
(97.4 %id)
CA431864 Alveolar Macrophage, lung HLA-DRB1.b 504 to 1210 721 to 19   AAA   703/703
(100 %)
9 diff
(98.8 %id)
BU626915 Alveolar Macrophage, lung HLA-DRB1.b 504 to 1210 722 to 19   AAA   704/704
(100 %)
4 diff
(99.5 %id)
CA306449 Alveolar Macrophage, lung HLA-DRB1.b 504 to 1206 719 to 19   AAA   701/701
(100 %)
16 diff
(97.8 %id)
CD366164 Alveolar Macrophage, lung HLA-DRB1.b 504 to 1210 721 to 19   AAA   703/703
(100 %)
19 diff
(97.3 %id)
CD743089 Alveolar Macrophage, lung HLA-DRB1.b 504 to 1206 718 to 19   AAA   700/700
(100 %)
20 diff
(97.2 %id)
BM707731 eye, RPE and Choroid HLA-DRB1.b 506 to 798 1 to 293   fully sequenced,   293/293
(100 %)
0 diff
(100 %id)
CA435042 lung, Lung Focal Fibrosis HLA-DRB1.b 527 to 1210 700 to 19   AAA   682/682
(100 %)
16 diff
(97.7 %id)
BI770236 pooled lung and spleen HLA-DRB1.b 528 to 1218 1 to 693       693/890
(77 %)
10 diff
(98.9 %id)
TI_57180094   HLA-DRB1.b 528 to 1218 69 to 761       693/958
(72 %)
16 diff
(98.4 %id)
CA431661 Alveolar Macrophage, lung HLA-DRB1.b 530 to 1206 692 to 19   AAA   674/674
(100 %)
27 diff
(96.0 %id)
CA308826 Alveolar Macrophage, lung HLA-DRB1.b 530 to 1206 693 to 19   AAA   675/675
(100 %)
21 diff
(96.9 %id)
BM990953 lung, Lung Focal Fibrosis HLA-DRB1.b 531 to 1210 694 to 19   AAA   676/676
(100 %)
19 diff
(97.2 %id)
CA431946 Alveolar Macrophage, lung HLA-DRB1.b 532 to 1206 690 to 19   AAA   672/672
(100 %)
18 diff
(97.4 %id)
CA435054 lung, Lung Focal Fibrosis HLA-DRB1.b 533 to 1206 688 to 19   AAA   670/670
(100 %)
29 diff
(95.7 %id)
BF913309.
matches multiple genes
uterus_tumor HLA-DRB1.b 542 to 850 317 to 10     Submitted on the opposite strand, also hits gene HLA-DRB5 308/344
(89 %)
11 diff
(96.9 %id)
BM989995 lung, Lung Focal Fibrosis HLA-DRB1.b 543 to 1210 684 to 19   AAA   666/666
(100 %)
26 diff
(96.1 %id)
BU617223 Bone, Subchondral Bone HLA-DRB1.b 543 to 1210 686 to 19   AAA   668/668
(100 %)
0 diff
(100 %id)
BU626428 Alveolar Macrophage, lung HLA-DRB1.b 543 to 1210 684 to 19   AAA   666/666
(100 %)
17 diff
(97.5 %id)
CR603446 B cells (Ramos cell line) Cot 25-normalized HLA-DRB1.b 545 to 1207 1 to 666       671/666
(100 %)
30 diff
(95.5 %id)
AI857975 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) HLA-DRB1.b 558 to 1201 649 to 10       642/649
(98 %)
10 diff
(98.5 %id)
CA431915 Alveolar Macrophage, lung HLA-DRB1.b 561 to 1210 666 to 19   AAA   648/657
(98 %)
19 diff
(97.2 %id)
AI720075 colon HLA-DRB1.b 572 to 1207 636 to 3       634/636
(99 %)
9 diff
(98.6 %id)
BU943765 mixed (pool of 40 RNAs) HLA-DRB1.b 573 to 1206 1 to 634       634/639
(99 %)
17 diff
(97.4 %id)
AW375846 colon HLA-DRB1.b 582 to 838 257 to 1       257/257
(100 %)
7 diff
(97.3 %id)
AI686759 serous papillary carcinoma, high grade, 2pooled tumors, uterus HLA-DRB1.b 583 to 1211 627 to 1       627/627
(100 %)
15 diff
(97.7 %id)
AW383729.
matches multiple genes
head_neck HLA-DRB1.b 584 to 833 252 to 2     also hits gene HLA-DRB5 251/290
(86 %)
14 diff
(95.2 %id)
AI459460 colon HLA-DRB1.b 584 to 1210 645 to 18   AAA   628/632
(99 %)
24 diff
(96.3 %id)
AI636411 adenocarcinoma, Pancreas HLA-DRB1.b 584 to 1213 633 to 6       628/637
(98 %)
15 diff
(97.7 %id)
BU626730 Alveolar Macrophage, lung HLA-DRB1.b 591 to 1206 634 to 19   AAA   616/621
(99 %)
14 diff
(97.8 %id)
BE138738 adenocarcinoma, Pancreas HLA-DRB1.b 598 to 1213 623 to 6       618/623
(99 %)
8 diff
(98.8 %id)
AI750149 colon HLA-DRB1.b 611 to 1201 599 to 10       590/599
(98 %)
9 diff
(98.5 %id)
BF813965 colon_ins HLA-DRB1.b 619 to 1050 432 to 1     Submitted on the opposite strand 432/432
(100 %)
4 diff
(99.1 %id)
AA595553 lung, lung tumor HLA-DRB1.b 629 to 1211 576 to 1       576/581
(99 %)
15 diff
(97.5 %id)
BF813936 colon_ins HLA-DRB1.b 632 to 1007 378 to 1     Submitted on the opposite strand 378/378
(100 %)
6 diff
(98.5 %id)
BQ325047 colon_ins HLA-DRB1.b 638 to 1028 395 to 3       393/395
(99 %)
1 diff
(99.8 %id)
BU730694 eye, RPE and Choroid HLA-DRB1.b 639 to 1206 586 to 19   AAA   568/568
(100 %)
0 diff
(100 %id)
BU626774 Alveolar Macrophage, lung HLA-DRB1.b 639 to 1210 593 to 19   AAA   575/575
(100 %)
14 diff
(97.6 %id)
CD370688 Alveolar Macrophage, lung HLA-DRB1.b 639 to 1206 587 to 19   AAA   569/569
(100 %)
5 diff
(99.2 %id)
AI572942.
matches multiple genes
lymph node, lymphoma, follicular mixed small and largecell HLA-DRB1.b 642 to 844 1 to 203     Submitted on the opposite strand, also hits gene HLA-DRB5, HLA-DRB6 203/220
(92 %)
11 diff
(95.0 %id)
CD638977 pooled HLA-DRB1.b 649 to 1202 1 to 554   AAA   554/554
(100 %)
3 diff
(99.5 %id)
BM993068 lung, Metastatic Chondrosarcoma HLA-DRB1.b 651 to 1206 574 to 19   AAA   556/556
(100 %)
14 diff
(97.5 %id)
BM973682 lung HLA-DRB1.b 653 to 1206 571 to 19   AAA   553/553
(100 %)
1 diff
(99.9 %id)
BE827520.
matches multiple genes
lung_tumor HLA-DRB1.b 669 to 826 1 to 158     also hits gene HLA-DRB5, HLA-DRB6 158/163
(96 %)
15 diff
(90.8 %id)
CR609601 thymus HLA-DRB1.b 684 to 1207 1 to 522       522/522
(100 %)
19 diff
(96.4 %id)
BX415829 thymus HLA-DRB1.b 684 to 1207 1 to 527       527/527
(100 %)
26 diff
(95.1 %id)
BE620070 large cell carcinoma, undifferentiated, lung HLA-DRB1.b 688 to 1207 1 to 521       521/534
(97 %)
5 diff
(99.1 %id)
DB545690 hippocampus HLA-DRB1.b 710 to 1210 1 to 501     Submitted on the opposite strand 501/501
(100 %)
1 diff
(99.9 %id)
DB564736 hypothalamus HLA-DRB1.b 739 to 1205 1 to 467     Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
AW605964.
matches multiple genes
head_neck HLA-DRB1.b 742 to 961 1 to 221   tiling clone, also hits gene HLA-DRB6 221/221
(100 %)
17 diff
(92.4 %id)
AI366041 brain, meningioma HLA-DRB1.b 754 to 1207 455 to 2       454/455
(99 %)
1 diff
(99.8 %id)
DB564747 hypothalamus HLA-DRB1.b 755 to 1210 1 to 456     Submitted on the opposite strand 456/456
(100 %)
2 diff
(99.6 %id)
BU733253 eye, RPE and Choroid HLA-DRB1.b 768 to 1206 457 to 19   fully sequenced, AAA   439/439
(100 %)
1 diff
(99.8 %id)
DB564179 hypothalamus HLA-DRB1.b 774 to 1210 1 to 437     Submitted on the opposite strand 437/437
(100 %)
2 diff
(99.6 %id)
AI870430 anaplastic oligodendroglioma, brain HLA-DRB1.b 779 to 1210 432 to 1       432/432
(100 %)
8 diff
(98.2 %id)
AW071959 anaplastic oligodendroglioma, brain HLA-DRB1.b 779 to 1210 432 to 1       432/432
(100 %)
8 diff
(98.2 %id)
T88824 liver and spleen HLA-DRB1.b 781 to 1198 427 to 1       427/427
(100 %)
11 diff
(97.5 %id)
BG059200 nasopharynx, normal epithelium HLA-DRB1.b 789 to 1207 1 to 419       419/421
(99 %)
1 diff
(99.8 %id)
BF847854 lung_normal HLA-DRB1.b 790 to 1103 1 to 314       314/314
(100 %)
2 diff
(99.4 %id)
AI811233 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus HLA-DRB1.b 804 to 1206 404 to 1       404/404
(100 %)
8 diff
(98.1 %id)
AW088444 ovary, tumor, 5 pooled (see description) HLA-DRB1.b 807 to 1213 409 to 1       409/409
(100 %)
7 diff
(98.3 %id)
AI979022 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors HLA-DRB1.b 811 to 1213 409 to 7       403/409
(98 %)
0 diff
(100 %id)
R96623 liver and spleen HLA-DRB1.b 816 to 1201 387 to 1       387/387
(100 %)
4 diff
(99.0 %id)
AA983981 pooled germ cell tumors HLA-DRB1.b 851 to 1210 359 to 1       359/359
(100 %)
1 diff
(99.8 %id)
AA634762 lung HLA-DRB1.b 956 to 1211 1 to 256       256/256
(100 %)
3 diff
(98.9 %id)
T64398 lung HLA-DRB1.b 966 to 1020 1 to 55   fully sequenced,   55/55
(100 %)
2 diff
(96.4 %id)
T64209 lung HLA-DRB1.b 990 to 1208 222 to 1   fully sequenced,   222/222
(100 %)
6 diff
(97.3 %id)
AW978164   HLA-DRB1.b 1198 to 1846 650 to 2   tiling clone, Submitted on the opposite strand 649/747
(86 %)
0 diff
(100 %id)
AW513246 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors HLA-DRB1.b 1488 to 1853 366 to 1       366/366
(100 %)
0 diff
(100 %id)
BX110957 carcinoid, lung HLA-DRB1.b 1502 to 2214 1 to 714   tiling clone,   714/714
(100 %)
2 diff
(99.8 %id)
AI791799 carcinoid, lung HLA-DRB1.b 1526 to 2043 1 to 518       518/518
(100 %)
2 diff
(99.7 %id)
AA814853 germinal center B cell HLA-DRB1.b 1576 to 1671 96 to 1       96/96
(100 %)
0 diff
(100 %id)
BE669692 carcinoid, lung HLA-DRB1.b 1793 to 2127 339 to 5       335/339
(98 %)
0 diff
(100 %id)
AI733387 carcinoid, lung HLA-DRB1.b 2077 to 2571 518 to 24   AAA   495/495
(100 %)
9 diff
(98.2 %id)
AW297218   HLA-DRB1.b 2115 to 2573 474 to 16   AAA   459/459
(100 %)
9 diff
(98.1 %id)
AA973963 carcinoid, lung HLA-DRB1.b 2171 to 2571 424 to 24   tiling clone, AAA   401/401
(100 %)
0 diff
(100 %id)
BG685547 B-cells, primary B-cells from tonsils (cell line) HLA-DRB1.c 1 to 749 1 to 751 F4S V12L L25Q H26L D27G ... tiling clone,   751/751
(100 %)
54 diff
(92.9 %id)
BF082950 colon_ins HLA-DRB1.c 60 to 531 1 to 472   tiling clone,   472/475
(99 %)
47 diff
(90.2 %id)
DB444267 testis HLA-DRB1.c 139 to 584 1 to 456   tiling clone,   462/456
(101 %)
15 diff
(96.8 %id)
R97362 liver and spleen HLA-DRB1.d 1 to 183 1 to 183   tiling clone,   183/183
(100 %)
4 diff
(97.9 %id)
BG686151 B-cells, primary B-cells from tonsils (cell line) HLA-DRB1.d 13 to 828 1 to 820 T2A A3V S18A W27E Q28Y ... tiling clone,   820/923
(88 %)
42 diff
(95.5 %id)
AI433241 lymph node, lymphoma, follicular mixed small and largecell HLA-DRB1.d 642 to 1088 486 to 13   tiling clone,   474/512
(92 %)
14 diff
(97.3 %id)
R97321 liver and spleen HLA-DRB1.d 912 to 1081 170 to 1   tiling clone,   170/170
(100 %)
0 diff
(100 %id)
BQ050331 leiomyosarcoma, uterus HLA-DRB1.e 1 to 740 1 to 742 K5R T13A A14V S29A W38E ... tiling clone,   742/1057
(70 %)
51 diff
(95.2 %id)
DA947559 Spleen HLA-DRB1.f 1 to 576 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
BF849427 lung_normal HLA-DRB1.f 27 to 437 10 to 415       406/415
(97 %)
6 diff
(98.6 %id)
BF849433 lung_normal HLA-DRB1.f 27 to 419 6 to 415       410/415
(98 %)
26 diff
(93.8 %id)
BF849434 lung_normal HLA-DRB1.f 29 to 421 1 to 393   tiling clone,   393/393
(100 %)
9 diff
(97.8 %id)
BF850515 lung_normal HLA-DRB1.f 29 to 375 7 to 354       348/354
(98 %)
6 diff
(98.4 %id)
BF848180 lung_normal HLA-DRB1.f 31 to 430 6 to 403       398/403
(98 %)
6 diff
(98.6 %id)
BF849424 lung_normal HLA-DRB1.f 35 to 270 8 to 247       240/247
(97 %)
9 diff
(96.4 %id)
BF849061 lung_normal HLA-DRB1.f 41 to 561 1 to 521       521/521
(100 %)
4 diff
(99.3 %id)
BF849421 lung_normal HLA-DRB1.f 41 to 405 1 to 367       367/367
(100 %)
2 diff
(99.5 %id)
BF850520 lung_normal HLA-DRB1.f 41 to 305 1 to 266       266/266
(100 %)
1 diff
(99.7 %id)
BQ329913 lung_normal HLA-DRB1.f 41 to 362 328 to 6       323/328
(98 %)
0 diff
(100 %id)
BF850474 lung_normal HLA-DRB1.f 61 to 234 1 to 171       171/171
(100 %)
4 diff
(97.7 %id)
BF850510 lung_normal HLA-DRB1.f 63 to 348 1 to 289       289/289
(100 %)
22 diff
(92.4 %id)
BQ329922 lung_normal HLA-DRB1.f 70 to 342 1 to 274       274/275
(99 %)
11 diff
(96.0 %id)
BF849432 lung_normal HLA-DRB1.f 94 to 406 43 to 357       315/357
(88 %)
6 diff
(98.4 %id)
BF849056 lung_normal HLA-DRB1.f 126 to 635 510 to 1     Submitted on the opposite strand 510/511
(99 %)
4 diff
(99.3 %id)
TI_159690123   HLA-DRB1.f 198 to 1005 83 to 879     Submitted on the opposite strand 797/1118
(71 %)
19 diff
(98.4 %id)
BF848177 lung_normal HLA-DRB1.f 243 to 641 409 to 10     Submitted on the opposite strand 400/409
(97 %)
0 diff
(100 %id)
BF848168 lung_normal HLA-DRB1.f 251 to 641 401 to 10     Submitted on the opposite strand 392/404
(97 %)
0 diff
(100 %id)
BF848161 lung_normal HLA-DRB1.f 253 to 640 398 to 11   tiling clone, Submitted on the opposite strand 388/400
(97 %)
0 diff
(100 %id)
BF849460 lung_normal HLA-DRB1.f 254 to 648 395 to 1     Submitted on the opposite strand 395/395
(100 %)
0 diff
(100 %id)
BF850469 lung_normal HLA-DRB1.f 267 to 600 341 to 8     Submitted on the opposite strand 334/341
(97 %)
0 diff
(100 %id)
BF850472 lung_normal HLA-DRB1.f 292 to 594 306 to 4     Submitted on the opposite strand 303/306
(99 %)
0 diff
(100 %id)
BF850482 lung_normal HLA-DRB1.f 296 to 603 309 to 2     Submitted on the opposite strand 308/309
(99 %)
0 diff
(100 %id)
BF850485 lung_normal HLA-DRB1.f 305 to 519 304 to 89     Submitted on the opposite strand 216/304
(71 %)
0 diff
(100 %id)
BF848160 lung_normal HLA-DRB1.f 314 to 641 340 to 10     Submitted on the opposite strand 331/340
(97 %)
0 diff
(100 %id)
BF848169 lung_normal HLA-DRB1.f 319 to 640 330 to 10     Submitted on the opposite strand 321/330
(97 %)
0 diff
(100 %id)
BF848165 lung_normal HLA-DRB1.f 347 to 640 307 to 11     Submitted on the opposite strand 297/307
(96 %)
0 diff
(100 %id)
BF849420 lung_normal HLA-DRB1.f 467 to 649 193 to 13     Submitted on the opposite strand 181/193
(93 %)
0 diff
(100 %id)
BG548469 lung HLA-DRB1.f 533 to 1328 1 to 794   tiling clone,   794/798
(99 %)
16 diff
(98.0 %id)
DB137617 thymus HLA-DRB1.g -11 to 535 2 to 546 C11S M12L T13A P25R L28F ... tiling clone, capped   545/545
(100 %)
46 diff
(91.6 %id)
DB145578.
matches multiple genes
thymus HLA-DRB1.g -11 to 503 2 to 519 C11S M12L T13A P25R L28F ... tiling clone, capped also hits gene HLA-DRB5 518/519
(99 %)
47 diff
(91.0 %id)
DB235706 trachea HLA-DRB1.g -11 to 512 2 to 523 K5R T13A A14V S29A W38E ... tiling clone, capped   522/522
(100 %)
24 diff
(95.5 %id)
DB287465 uterus HLA-DRB1.g -11 to 516 2 to 531 C11S M12L T13A P25R L28F ... capped   530/532
(99 %)
50 diff
(90.7 %id)
DB148426 thymus HLA-DRB1.g -9 to 491 2 to 502 K5R T13A A14V S29A W38E ... capped   501/501
(100 %)
23 diff
(95.5 %id)
DB286348.
matches multiple genes
uterus HLA-DRB1.g 151 to 532 167 to 550 C11S M12L T13A P25R L28F ... tiling clone, capped also hits gene HLA-DRB5 547/549
(99 %)
53 diff
(90.4 %id)
BI006850 kidney_tumor HLA-DRB1.h-u 1 to 511 7 to 528 R19Q M21R S23P Q39P R40A ... tiling clone,   522/552
(94 %)
27 diff
(95.2 %id)
BF813964 colon_ins HLA-DRB1.i 1 to 406 408 to 3 exact tiling clone, Submitted on the opposite strand 406/408
(99 %)
0 diff
(100 %id)
AW364270 denis_drash HLA-DRB1.i 128 to 519 1 to 394   tiling clone,   394/395
(99 %)
21 diff
(94.7 %id)
DA342334.
matches multiple genes
substantia nigra HLA-DRB1.j -11 to 536 2 to 553   tiling clone, capped also hits gene HLA-DRB5 552/552
(100 %)
43 diff
(92.3 %id)
DA379920.
matches multiple genes
thalamus HLA-DRB1.j -11 to 602 2 to 619   tiling clone, capped also hits gene HLA-DRB5 618/624
(99 %)
52 diff
(91.7 %id)
DA040430.
matches multiple genes
bladder HLA-DRB1.j 1 to 470 2 to 475   tiling clone, capped also hits gene HLA-DRB5 474/474
(100 %)
45 diff
(90.6 %id)
DA370683.
matches multiple genes
thalamus HLA-DRB1.j 1 to 557 2 to 563   capped also hits gene HLA-DRB5 562/562
(100 %)
46 diff
(91.9 %id)
DA379605.
matches multiple genes
thalamus HLA-DRB1.j 1 to 523 2 to 528   capped also hits gene HLA-DRB5 527/527
(100 %)
46 diff
(91.3 %id)
AL709577 human skeletal muscle HLA-DRB1.j 9 to 406 1 to 399   tiling clone,   399/399
(100 %)
7 diff
(98.3 %id)
BG536764 lung HLA-DRB1.j 17 to 733 1 to 725   tiling clone,   725/904
(80 %)
71 diff
(92.2 %id)
BM546732 ovary (pool of 3) HLA-DRB1.j 27 to 868 22 to 867   tiling clone,   846/1049
(80 %)
74 diff
(93.0 %id)
U70544   HLA-DRB1.j 133 to 1261 1 to 1122   tiling clone,   1087/1122
(96 %)
96 diff
(91.5 %id)
BF857838 prostate_tumor HLA-DRB1.j 280 to 716 450 to 17     Submitted on the opposite strand 434/454
(95 %)
0 diff
(100 %id)
BQ722071 sympathetic trunk HLA-DRB1.j 650 to 1390 1 to 742   tiling clone,   742/917
(80 %)
69 diff
(92.5 %id)
BI019200 marrow HLA-DRB1.j 1152 to 1728 10 to 587   tiling clone,   578/587
(98 %)
6 diff
(99.0 %id)
AL703426.
matches multiple genes
human skeletal muscle HLA-DRB1.j 1251 to 1825 1 to 577 T40M L55I Q71R P73S L80F ... tiling clone, also hits gene HLA-DRB5, HLA-DRB6 577/579
(99 %)
45 diff
(92.3 %id)
TI_154109779   HLA-DRB1.k 1 to 740 822 to 81 S3H Q8L L9S G15D Q18P ... tiling clone, AAA   742/917
(80 %)
62 diff
(93.3 %id)
CA448016 Chondrosarcoma, Left Pelvis HLA-DRB1.k 22 to 740 739 to 19 S3H Q8L L9S G15D Q18P ... AAA   721/725
(99 %)
55 diff
(92.5 %id)
BF849765 lung_normal HLA-DRB1.k 168 to 692 528 to 4   tiling clone, Submitted on the opposite strand 525/530
(99 %)
4 diff
(99.3 %id)
BF849917 lung_normal HLA-DRB1.k 246 to 692 449 to 4   tiling clone, Submitted on the opposite strand 446/449
(99 %)
1 diff
(99.8 %id)
BF849924 lung_normal HLA-DRB1.k 271 to 686 424 to 9   tiling clone, Submitted on the opposite strand 416/424
(98 %)
0 diff
(100 %id)
AW514696 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus HLA-DRB1.k 301 to 742 445 to 1 S3H Q8L L9S G15D Q18P ...     445/445
(100 %)
10 diff
(97.8 %id)
BI006996 kidney_tumor HLA-DRB1.m-u 84 to 449 6 to 367   tiling clone,   362/367
(98 %)
6 diff
(98.4 %id)
AW130892 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus HLA-DRB1.m-u 106 to 551 456 to 11 A6S Q8L L32F P41S V45A ... AAA   446/446
(100 %)
25 diff
(94.4 %id)
DB525689 testis HLA-DRB1.m-u 112 to 553 1 to 442 exact tiling clone, Submitted on the opposite strand 442/442
(100 %)
0 diff
(100 %id)
BE646406 B-cell, chronic lymphotic leukemia HLA-DRB1.m-u 507 to 560 55 to 2 S3H Q8L L9S G15D Q18P ... tiling clone,   541/567
(95 %)
38 diff
(93.3 %id)
TI_57183618   Gene HLA-DRB1, variant not shown         This clone was ignored    
TI_57237638   Gene HLA-DRB1, variant not shown              
L44421   Gene HLA-DRB1, variant not shown              
NM_021983.4   Gene HLA-DRB1, variant not shown       RefSeq, This clone was ignored    
309 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k, .l-u, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI