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Gene HK3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
96 supporting clones for gene HK3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
TI_1540413656   .a 1 to 319 331 to 16   tiling clone,   316/375
(84 %)
4 diff
(99.0 %id)
AL597571   .a 13 to 415 1 to 403       403/403
(100 %)
1 diff
(99.8 %id)
DN996305 breast cancer, Mammary gland (cancer tissue) .a 16 to 719 1 to 704       704/704
(100 %)
8 diff
(98.9 %id)
CD614071   .a 17 to 775 8 to 767       760/767
(99 %)
18 diff
(97.7 %id)
BC028129 Blood, adult leukocytes .a 20 to 3085 1 to 3066 exact tiling clone, available from MGC,   3066/3073
(99 %)
3 diff
(100.0 %id)
BI906191 leukocyte .a 20 to 670 1 to 658       658/658
(100 %)
16 diff
(97.6 %id)
TI_57231722   .a 20 to 670 27 to 684       658/684
(96 %)
22 diff
(96.8 %id)
NM_002115.2   .a 20 to 3086 1 to 3067 exact RefSeq, AAA   3067/3067
(100 %)
0 diff
(100 %id)
CD614074   .a 21 to 811 1 to 796       796/800
(99 %)
12 diff
(98.5 %id)
TI_57231556   .a 21 to 600 28 to 611       584/731
(79 %)
22 diff
(97.0 %id)
BI906097 leukocyte .a 26 to 600 1 to 579       579/699
(82 %)
17 diff
(97.6 %id)
U51333   .a 38 to 3086 1 to 3049 F277L E853G tiling clone, AAA   3049/3049
(100 %)
3 diff
(100.0 %id)
BM922932 leukocyte .a 47 to 1016 10 to 984       975/1026
(95 %)
18 diff
(98.3 %id)
TI_1948087757   .a 111 to 1024 136 to 1052       917/1342
(68 %)
21 diff
(98.5 %id)
TI_1948087933   .a 111 to 1025 135 to 1048       914/1363
(67 %)
10 diff
(99.3 %id)
TI_1948088109   .a 111 to 1027 131 to 1039       909/1297
(70 %)
19 diff
(98.6 %id)
TI_1948087595   .a 113 to 1020 134 to 1032       899/1325
(67 %)
28 diff
(97.9 %id)
CD614072   .a 227 to 1073 865 to 23       843/865
(97 %)
8 diff
(99.1 %id)
CD614073   .a 373 to 1091 724 to 4       719/724
(99 %)
14 diff
(98.1 %id)
BF901013 marrow .a 979 to 1339 1 to 359       359/359
(100 %)
9 diff
(97.5 %id)
BQ334986 marrow .a 1785 to 2331 32 to 578       547/578
(94 %)
8 diff
(98.7 %id)
TI_1948088110   .a 1845 to 2887 1166 to 125       1042/1319
(78 %)
32 diff
(97.6 %id)
TI_1948087934   .a 1846 to 2887 1160 to 124       1037/1309
(79 %)
25 diff
(98.1 %id)
TI_1948087758   .a 1852 to 2887 1149 to 123       1027/1314
(78 %)
28 diff
(97.9 %id)
TI_1948087596   .a 1964 to 2887 1045 to 123       923/1321
(69 %)
10 diff
(99.3 %id)
BF900382 marrow .a 2082 to 2502 443 to 19     Submitted on the opposite strand 425/443
(95 %)
9 diff
(98.0 %id)
BQ334217 marrow .a 2115 to 2451 75 to 411       337/411
(81 %)
16 diff
(96.2 %id)
BX095227 uterus .a 2129 to 2596 1 to 468       468/468
(100 %)
0 diff
(100 %id)
BG538605 lung .a 2152 to 2817 1 to 663       663/663
(100 %)
7 diff
(99.0 %id)
TI_227712661   .a 2231 to 3086 929 to 79   AAA   851/986
(86 %)
25 diff
(97.5 %id)
BI908489 leukocyte .a 2309 to 2911 1 to 601       601/601
(100 %)
3 diff
(99.6 %id)
TI_57236793   .a 2309 to 2911 62 to 662       601/662
(90 %)
7 diff
(99.0 %id)
BI910958 leukocyte .a 2310 to 3086 1 to 778       778/841
(92 %)
13 diff
(98.5 %id)
TI_57236881   .a 2311 to 3086 94 to 870       777/1008
(77 %)
18 diff
(98.3 %id)
CD366037 Alveolar Macrophage, lung .a 2353 to 3086 749 to 17   AAA   733/733
(100 %)
3 diff
(99.6 %id)
CA309463 Alveolar Macrophage, lung .a 2387 to 3084 715 to 19   AAA   697/697
(100 %)
4 diff
(99.5 %id)
CD368053 Alveolar Macrophage, lung .a 2395 to 3084 707 to 19   AAA   689/689
(100 %)
3 diff
(99.6 %id)
CB528863 Aveolar Macrophage, lung .a 2421 to 3086 682 to 17   AAA   666/666
(100 %)
0 diff
(100 %id)
CB529264 Aveolar Macrophage, lung .a 2421 to 3084 682 to 19   AAA   664/664
(100 %)
0 diff
(100 %id)
TI_154010280   .a 2426 to 3087 807 to 135       671/1236
(54 %)
29 diff
(97.7 %id)
BM997997 lung, Metastatic Chondrosarcoma .a 2439 to 3086 666 to 19   AAA   648/648
(100 %)
3 diff
(99.6 %id)
CD368609 Alveolar Macrophage, lung .a 2440 to 3086 662 to 17   AAA   646/646
(100 %)
1 diff
(99.9 %id)
CD367171 Alveolar Macrophage, lung .a 2455 to 3086 648 to 17   AAA   632/632
(100 %)
0 diff
(100 %id)
CB529448 Aveolar Macrophage, lung .a 2472 to 3084 631 to 19   AAA   613/613
(100 %)
0 diff
(100 %id)
CA308619 Alveolar Macrophage, lung .a 2479 to 3086 625 to 19   AAA   607/607
(100 %)
1 diff
(99.9 %id)
AW467633 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 2491 to 3065 575 to 1       575/575
(100 %)
3 diff
(99.5 %id)
AW468428 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 2494 to 3087 597 to 4       594/597
(99 %)
7 diff
(98.9 %id)
CD368453 Alveolar Macrophage, lung .a 2496 to 3084 607 to 19   AAA   589/589
(100 %)
0 diff
(100 %id)
CD370640 Alveolar Macrophage, lung .a 2498 to 3086 607 to 19   AAA   589/589
(100 %)
0 diff
(100 %id)
AW468506 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 2503 to 3086 584 to 1       584/590
(98 %)
31 diff
(94.8 %id)
BF447922 carcinoid, lung .a 2517 to 2878 361 to 1       361/361
(100 %)
7 diff
(98.1 %id)
AW468421 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 2522 to 3087 570 to 5       566/571
(99 %)
6 diff
(99.0 %id)
BG231919 blood, lymphocyte .a 2522 to 3064 543 to 1       543/544
(99 %)
0 diff
(100 %id)
AI636917 pooled germ cell tumors .a 2524 to 3080 558 to 1       558/558
(100 %)
5 diff
(99.2 %id)
CB528781 Aveolar Macrophage, lung .a 2556 to 3080 543 to 19   AAA   525/525
(100 %)
0 diff
(100 %id)
AI089249 uterus .a 2593 to 3090 498 to 1   tiling clone,   498/498
(100 %)
0 diff
(100 %id)
CD368330 Alveolar Macrophage, lung .a 2604 to 3086 499 to 17   AAA   483/483
(100 %)
0 diff
(100 %id)
AA635879 normal prostate, Prostate .a 2611 to 3081 471 to 1       471/471
(100 %)
6 diff
(98.8 %id)
BF899204 marrow .a 2628 to 2808 4 to 182       179/200
(89 %)
10 diff
(95.0 %id)
BQ010955 placenta .a 2630 to 3086 475 to 19   AAA   457/457
(100 %)
1 diff
(99.8 %id)
CA435510 lung, Metastatic Chondrosarcoma .a 2632 to 3086 473 to 19   AAA   455/455
(100 %)
5 diff
(99.0 %id)
AW168545 bowel (skin primary), metastatic melanoma to bowel .a 2679 to 3085 409 to 4       406/418
(97 %)
2 diff
(99.6 %id)
BQ335855 marrow .a 2690 to 2942 1 to 248       248/248
(100 %)
8 diff
(96.8 %id)
AA135639 uterus .a 2774 to 3090 324 to 1       324/340
(95 %)
9 diff
(97.4 %id)
CF528306 placenta .a 2785 to 3086 319 to 18   AAA   302/302
(100 %)
3 diff
(99.1 %id)
U42303 Liver .b 1 to 1989 1 to 1982 Q52L E63Q V71I K142R L144S ... tiling clone, AAA   1982/1982
(100 %)
39 diff
(98.1 %id)
AB075856 brain .b 1963 to 8457 6495 to 1   tiling clone, available from KIAA, Submitted on the opposite strand 6495/6495
(100 %)
5 diff
(100.0 %id)
DB555354.
matches multiple genes
hypothalamus .b 1963 to 2670 706 to 3     also hits gene UNC5A 704/706
(99 %)
0 diff
(100 %id)
DB530634 hippocampus .b 1964 to 2263 665 to 365       301/666
(45 %)
0 diff
(100 %id)
DB554925.
matches multiple genes
hypothalamus .b 1964 to 2645 677 to 1   tiling clone, also hits gene UNC5A 677/678
(99 %)
28 diff
(95.9 %id)
DB575066.
matches multiple genes
hypothalamus .b 1964 to 2425 464 to 3     also hits gene UNC5A 462/465
(99 %)
0 diff
(100 %id)
BU164960 eye, retinoblastoma .b 2453 to 3151 11 to 711       701/897
(78 %)
15 diff
(98.4 %id)
BF899594 marrow .b 4845 to 5263 1 to 416       416/416
(100 %)
11 diff
(97.4 %id)
BF846931 lung_normal .b 5822 to 6053 253 to 21     Submitted on the opposite strand 233/253
(92 %)
0 diff
(100 %id)
BM272095 Pancreas, Purified pancreatic islet .b 7503 to 7970 1 to 468       468/468
(100 %)
4 diff
(99.2 %id)
CK824949 Pancreas, Purified pancreatic islet .b 7544 to 8129 1 to 586     Submitted on the opposite strand 586/586
(100 %)
0 diff
(100 %id)
BM271771 Pancreas, Purified pancreatic islet .b 7882 to 8458 577 to 1   tiling clone,   577/577
(100 %)
0 diff
(100 %id)
AI334729 brain, tumor, 5 pooled (see description) .b 8137 to 8449 313 to 1       313/313
(100 %)
2 diff
(99.4 %id)
CK824950 Pancreas, Purified pancreatic islet .b 8292 to 8411 123 to 1     Submitted on the opposite strand 123/123
(100 %)
4 diff
(96.8 %id)
AB208951 Spleen .c 1 to 4111 1 to 4111 exact tiling clone,   4111/4111
(100 %)
2 diff
(100.0 %id)
CA405887 adipose .c 284 to 640 1 to 358       358/358
(100 %)
1 diff
(99.8 %id)
CV030422 mixed .c 292 to 837 1 to 548       548/548
(100 %)
4 diff
(99.3 %id)
BI031995 marrow .c 397 to 901 11 to 515       505/515
(98 %)
6 diff
(98.9 %id)
BX482076   .c 593 to 1143 1 to 555       555/556
(99 %)
8 diff
(98.6 %id)
BF903399 marrow .c 603 to 1057 19 to 469       451/473
(95 %)
23 diff
(95.2 %id)
BI028705 marrow .c 946 to 1103 1 to 155   tiling clone,   155/155
(100 %)
7 diff
(95.5 %id)
CD557470 testis .c 1398 to 2225 1 to 832       832/897
(92 %)
12 diff
(98.7 %id)
BX644742   .c 1920 to 2655 1 to 736       736/736
(100 %)
2 diff
(99.8 %id)
BX644633   .c 2015 to 2605 1 to 601       610/601
(101 %)
59 diff
(90.2 %id)
BQ334202 marrow .c 2690 to 3210 541 to 11       531/541
(98 %)
22 diff
(96.0 %id)
BF767739 colon_normal .c 2787 to 3004 241 to 25     Submitted on the opposite strand 217/241
(90 %)
0 diff
(100 %id)
BM689124 eye, optic nerve .c 3289 to 3786 12 to 425       414/425
(97 %)
6 diff
(98.6 %id)
C18132 placenta .c 3315 to 3587 1 to 273       273/276
(98 %)
5 diff
(98.2 %id)
TI_57232133   .d 1 to 543 23 to 580 F53L L66T L67A R68E D69S ... tiling clone,   558/811
(68 %)
22 diff
(97.3 %id)
BI906252 leukocyte .d 6 to 543 1 to 553 F53L L66T L67A R68E D69S ... tiling clone,   553/784
(70 %)
18 diff
(97.8 %id)
BF906102 marrow .e 1 to 543 565 to 23 R72K C106* tiling clone, Submitted on the opposite strand 547/569
(96 %)
1 diff
(99.9 %id)
TI_1540413468   .f 1 to 713 740 to 19 T61P tiling clone,   493/789
(62 %)
13 diff
(98.4 %id)
TI_1540413562   .f 24 to 371 717 to 370 K58N tiling clone,   348/763
(45 %)
5 diff
(99.4 %id)
BI023338 marrow Gene HK3, variant not shown         This clone was ignored    
DB466802.
matches multiple genes
hippocampus Gene UNC5A, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene UNC5A    
DB466802.
matches multiple genes
hippocampus Gene HK3, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene UNC5A    
DB533700.
matches multiple genes
hippocampus Gene UNC5A, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene UNC5A    
DB533700.
matches multiple genes
hippocampus Gene HK3, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene UNC5A    
DB328847 placenta Gene HK3, variant not shown         This clone was ignored    
DA854375 placenta Gene HK3, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI