To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene HIST1H1CTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
266 supporting clones for gene HIST1H1C back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
FN145008 breast carcinoma .a-u 1 to 79 1 to 79       79/79
(100 %)
3 diff
(96.3 %id)
BU953725 mixed (pool of 40 RNAs) .a-u 2 to 748 1 to 756 R79C K201Q A208S A209G P210A ...     756/758
(99 %)
20 diff
(97.4 %id)
TI_154028342   .a-u 2 to 774 62 to 832 exact   Submitted on the opposite strand 771/1081
(71 %)
10 diff
(99.1 %id)
BG432996 Kidney .a-u 4 to 689 1 to 685   tiling clone,   685/687
(99 %)
8 diff
(98.9 %id)
BU599178 mixed (pool of 40 RNAs) .a-u 4 to 705 1 to 717 K181Q P182A K183P K184R A185K ... AAA   717/776
(92 %)
25 diff
(96.8 %id)
AW578716 colon .a-u 5 to 523 523 to 9       515/540
(95 %)
0 diff
(100 %id)
BU597978 mixed (pool of 40 RNAs) .a-u 7 to 773 1 to 765 G133V K140N T167N S188V A189L ...     765/856
(89 %)
30 diff
(96.5 %id)
CK005054 brain/CNS, Human Brain - Frontal Cortex .a-u 7 to 661 1 to 642       642/646
(99 %)
20 diff
(97.0 %id)
AV764622 bone marrow .a-u 7 to 405 1 to 395       395/399
(98 %)
7 diff
(98.3 %id)
AW578718 colon .a-u 8 to 523 525 to 11       515/525
(98 %)
0 diff
(100 %id)
BF213746 bone marrow, from acute myelogenous leukemia .a-u 9 to 598 1 to 589       589/592
(99 %)
17 diff
(97.2 %id)
NM_005319.3   .a-u 9 to 740 1 to 732 exact RefSeq,   732/732
(100 %)
0 diff
(100 %id)
BP871032 embryonal kidney .a-u 10 to 340 1 to 331       331/331
(100 %)
2 diff
(99.4 %id)
BP382422 adipose tissue .a-u 10 to 606 1 to 597       597/597
(100 %)
8 diff
(98.7 %id)
AK290947   .a-u 10 to 927 1 to 920 exact tiling clone,   920/920
(100 %)
3 diff
(99.7 %id)
AV742816 cord Blood .a-u 10 to 422 48 to 469       422/482
(87 %)
6 diff
(98.8 %id)
DW415876 Liver .a-u 10 to 303 18 to 311       294/311
(94 %)
6 diff
(98.1 %id)
DW416136 Liver .a-u 10 to 303 18 to 310       293/310
(94 %)
6 diff
(98.1 %id)
DW427972 Liver .a-u 10 to 267 18 to 277       260/277
(93 %)
6 diff
(97.9 %id)
DW430852 Liver .a-u 10 to 259 18 to 271       254/271
(93 %)
6 diff
(97.8 %id)
BP232437 muscle .a-u 10 to 594 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
BP246430 Kidney .a-u 10 to 524 1 to 515       515/524
(98 %)
1 diff
(99.9 %id)
BJ994665 hepatoblastoma .a-u 10 to 466 1 to 457   fully sequenced,   457/457
(100 %)
1 diff
(99.8 %id)
CK126083 embryonic stem cell, Embryonic stem cell, pooled H7 ES cell line,passage 22 .a-u 10 to 754 24 to 768 A192V     745/770
(96 %)
3 diff
(99.7 %id)
AV763260 bone marrow .a-u 10 to 749 1 to 740 A18V K168Q K169E V170S A171G ...     740/756
(97 %)
17 diff
(97.8 %id)
BM757249 Ascites, stomach .a-u 10 to 370 1 to 361       361/361
(100 %)
3 diff
(99.2 %id)
BM832474 stomach .a-u 10 to 467 1 to 457       457/457
(100 %)
2 diff
(99.6 %id)
BM830990 stomach .a-u 10 to 565 1 to 554       554/554
(100 %)
3 diff
(99.5 %id)
BM795500 stomach .a-u 10 to 457 25 to 474       450/474
(94 %)
6 diff
(98.8 %id)
BP351243   .a-u 10 to 591 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP354150   .a-u 10 to 573 1 to 564       564/583
(96 %)
2 diff
(99.7 %id)
DA687178   .a-u 11 to 546 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
BM737717 Ascites, stomach .a-u 11 to 613 1 to 603       603/603
(100 %)
7 diff
(98.9 %id)
FN171852 breast carcinoma .a-u 13 to 79 9 to 75       67/75
(89 %)
6 diff
(92.0 %id)
BU072093 Pancreas, Purified pancreatic islet .a-u 14 to 273 1 to 260   fully sequenced,   260/260
(100 %)
5 diff
(98.1 %id)
BC002649 Uterus, endometrium adenocarcinoma .a-u 16 to 774 9 to 767 exact tiling clone, available from MGC,   759/765
(99 %)
1 diff
(99.9 %id)
BQ709085 Spleen .a-u 16 to 774 7 to 764 exact     758/767
(98 %)
8 diff
(99.0 %id)
CD243663 testis .a-u 16 to 783 1 to 779 K187Q K204Q K211Q     779/851
(91 %)
30 diff
(96.5 %id)
BG036538 adenocarcinoma, cell line, Prostate .a-u 19 to 768 1 to 783 A11V K26R E42R L43A I44H ...     783/808
(96 %)
47 diff
(94.2 %id)
BM737803 Ascites, stomach .a-u 19 to 605 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
BF175561 blood .a-u 20 to 215 1 to 197       197/198
(99 %)
3 diff
(98.5 %id)
BF176262 blood .a-u 20 to 251 1 to 231       231/231
(100 %)
3 diff
(98.8 %id)
BG491288 amelanotic melanoma, cell line, skin .a-u 20 to 775 1 to 756 exact fully sequenced, AAA   756/756
(100 %)
5 diff
(99.4 %id)
BP431850   .a-u 20 to 347 1 to 328       328/328
(100 %)
6 diff
(98.2 %id)
BG492167 amelanotic melanoma, cell line, skin .a-u 21 to 721 704 to 4 exact fully sequenced,   701/704
(99 %)
0 diff
(100 %id)
BM808961 amelanotic melanoma, cell line, skin .a-u 21 to 775 27 to 781 exact AAA   755/781
(96 %)
6 diff
(99.3 %id)
DN993445 brain, whole brain .a-u 21 to 732 9 to 718 K27R A28L G30V T31R P32L ...     710/718
(98 %)
6 diff
(99.2 %id)
BG925296 cartilage .a-u 22 to 664 75 to 718       644/650
(99 %)
6 diff
(99.1 %id)
BG926515 cartilage .a-u 22 to 545 77 to 599       523/529
(98 %)
7 diff
(98.7 %id)
R98517 liver and spleen .a-u 22 to 465 1 to 455       455/465
(97 %)
18 diff
(96.2 %id)
AA178863 muscle, skeletal muscle .a-u 22 to 434 1 to 427       427/427
(100 %)
24 diff
(94.4 %id)
AA301205 testis .a-u 23 to 293 1 to 271       271/271
(100 %)
3 diff
(98.9 %id)
H94096 placenta .a-u 23 to 370 1 to 353   fully sequenced,   353/353
(100 %)
13 diff
(96.4 %id)
BP431973   .a-u 23 to 452 1 to 430       430/430
(100 %)
1 diff
(99.8 %id)
BX092939 liver and spleen .a-u 24 to 773 1 to 751 exact AAA   751/751
(100 %)
1 diff
(99.9 %id)
T66816 liver and spleen .a-u 24 to 427 1 to 408   fully sequenced,   408/408
(100 %)
13 diff
(96.9 %id)
R66771 placenta .a-u 24 to 344 1 to 324       324/329
(98 %)
9 diff
(97.3 %id)
AW440148 large cell carcinoma, lung .a-u 24 to 441 1 to 418     Submitted on the opposite strand 418/424
(98 %)
6 diff
(98.6 %id)
BQ882224 sympathetic trunk .a-u 24 to 773 1 to 749 exact AAA   749/749
(100 %)
3 diff
(99.6 %id)
BE972496 testis .a-u 25 to 458 1 to 440       440/688
(63 %)
13 diff
(98.2 %id)
BG105626 adrenal cortex carcinoma, cell line, adrenal gland .a-u 25 to 685 1 to 653       653/863
(75 %)
12 diff
(98.7 %id)
BG337661 leiomyosarcoma cell line, uterus .a-u 25 to 772 26 to 765 A134Q A135P K136R K137S K139R ... AAA   740/765
(96 %)
6 diff
(99.3 %id)
BP432215   .a-u 26 to 450 1 to 425       425/425
(100 %)
1 diff
(99.8 %id)
BM888252 eye .a-u 28 to 575 1 to 557       557/564
(98 %)
14 diff
(97.6 %id)
EC492612 Prostate .a-u 28 to 144 1 to 116       116/116
(100 %)
1 diff
(99.2 %id)
H13721 placenta .a-u 28 to 450 1 to 440   fully sequenced,   440/440
(100 %)
18 diff
(96.0 %id)
BF213011 bone marrow, from chronic myelogenous leukemia .a-u 29 to 733 1 to 688 A18V L43F A135D A142V G143A ...     688/887
(77 %)
41 diff
(95.4 %id)
BC052623 Prostate, carcinoma .a-u 30 to 773 631 to 1374 P182H AAA   744/1374
(54 %)
6 diff
(99.6 %id)
BM737917 Ascites, stomach .a-u 30 to 634 1 to 604       604/604
(100 %)
4 diff
(99.4 %id)
BF173777 blood .a-u 31 to 198 1 to 169       169/169
(100 %)
9 diff
(94.7 %id)
R80976 placenta .a-u 31 to 448 1 to 426   fully sequenced,   426/426
(100 %)
19 diff
(95.6 %id)
BG754386 B-cells, primary B-cells from tonsils (cell line) .a-u 31 to 689 1 to 660       660/664
(99 %)
12 diff
(98.2 %id)
BU186034 epidermoid carcinoma, cell line, salivary gland .a-u 31 to 766 32 to 778 K157I K159N K187Q K196Q A197G ...     747/956
(78 %)
36 diff
(96.3 %id)
CT003747 T-Lymphocytes .a-u 31 to 770 1 to 741 K156X S173X K206*     741/750
(98 %)
2 diff
(99.8 %id)
EC523683 Prostate .a-u 32 to 139 1 to 107       107/111
(96 %)
2 diff
(98.2 %id)
BE791386 lung, small cell carcinoma .a-u 32 to 763 18 to 754 K27R A28L G30V T31R P32L ...     737/765
(96 %)
18 diff
(97.7 %id)
BM464532 leiomyosarcoma, uterus .a-u 32 to 774 39 to 781 P9S     743/791
(93 %)
3 diff
(99.7 %id)
BU508505 leiomyosarcoma, uterus .a-u 32 to 773 12 to 755 K204Q K211Q K212E K213E     744/936
(79 %)
16 diff
(98.3 %id)
DR156044 human embryonic stem cells differentiated toan early endodermal cell type .a-u 32 to 769 1 to 738 exact     738/738
(100 %)
0 diff
(100 %id)
BM694717 eye, RPE and Choroid .a-u 32 to 471 1 to 440       440/440
(100 %)
1 diff
(99.8 %id)
BM688998 eye, optic nerve .a-u 32 to 509 9 to 486   fully sequenced,   478/486
(98 %)
1 diff
(99.8 %id)
R25324 placenta .a-u 33 to 465 1 to 438       438/438
(100 %)
15 diff
(96.6 %id)
BI764223 pooled colon, kidney, stomach .a-u 33 to 799 1 to 764 S2V P13V P14C A15G K17G ...     764/765
(99 %)
9 diff
(98.9 %id)
BQ720436 sympathetic trunk .a-u 33 to 773 1 to 741 A7V AAA   741/741
(100 %)
2 diff
(99.8 %id)
BU521277 leiomyosarcoma, uterus .a-u 33 to 354 1 to 322       322/322
(100 %)
1 diff
(99.7 %id)
TI_57148660   .a-u 33 to 799 34 to 797 S2V P13V P14C A15G K17G ...     764/798
(95 %)
9 diff
(98.9 %id)
BP432164   .a-u 33 to 419 1 to 387       387/387
(100 %)
4 diff
(99.0 %id)
AA314673 colon .a-u 34 to 443 1 to 409       409/409
(100 %)
4 diff
(99.1 %id)
AA040305 heart .a-u 34 to 445 1 to 412   fully sequenced,   412/412
(100 %)
16 diff
(96.2 %id)
BG027393 Bone, osteosarcoma, cell line .a-u 34 to 641 1 to 604       604/855
(70 %)
9 diff
(99.0 %id)
BU184494 leiomyosarcoma, uterus .a-u 34 to 770 1 to 737 exact AAA   737/737
(100 %)
2 diff
(99.8 %id)
BQ670284 epidermoid carcinoma, cell line, salivary gland .a-u 34 to 775 1 to 744 K187X P195A V202G P205A K206X ... AAA   744/744
(100 %)
15 diff
(98.0 %id)
BQ891698 carcinoma, cell line, Prostate .a-u 34 to 773 1 to 740 exact AAA   740/740
(100 %)
2 diff
(99.8 %id)
CB155943 Liver .a-u 34 to 551 1 to 517       517/517
(100 %)
3 diff
(99.5 %id)
CB164750 Liver .a-u 34 to 539 1 to 505       505/505
(100 %)
3 diff
(99.5 %id)
AJ712130 heart .a-u 35 to 521 1 to 486       486/486
(100 %)
6 diff
(98.8 %id)
T81628 liver and spleen .a-u 35 to 416 1 to 388       388/394
(98 %)
14 diff
(96.5 %id)
BM796776 Ascites, stomach .a-u 35 to 553 1 to 519       519/519
(100 %)
2 diff
(99.7 %id)
BP432199   .a-u 37 to 406 8 to 378       371/378
(98 %)
6 diff
(98.5 %id)
BF174011 blood .a-u 39 to 214 1 to 173       173/173
(100 %)
4 diff
(97.7 %id)
BE379033 endometrium, adenocarcinoma cell line, uterus .a-u 39 to 774 1 to 744 K121T T154N P155T K156E K157E ... available from MGC,   744/998
(74 %)
23 diff
(97.7 %id)
TI_151706879   .a-u 39 to 773 822 to 87 S2V E3R T4D A5C P6S ... AAA   736/951
(77 %)
6 diff
(99.4 %id)
R23462 placenta .a-u 41 to 297 1 to 256       256/256
(100 %)
11 diff
(95.8 %id)
H92094 eye, retina .a-u 41 to 499 14 to 479       466/479
(97 %)
8 diff
(98.4 %id)
BF037783 adenocarcinoma, ovary .a-u 41 to 774 1 to 712 P128S A163R A164H T165C V166N ...     712/891
(79 %)
27 diff
(97.0 %id)
T83000 liver and spleen .a-u 42 to 403 11 to 381   fully sequenced,   371/381
(97 %)
6 diff
(98.5 %id)
BE747327 adenocarcinoma cell line, ovary .a-u 42 to 770 1 to 730 V202G V203C K204Q P205A K206*     730/730
(100 %)
2 diff
(99.8 %id)
AA323910 brain, cerebellum .a-u 43 to 516 1 to 482       482/482
(100 %)
14 diff
(97.1 %id)
TI_57171916   .a-u 43 to 729 24 to 710 exact     687/847
(81 %)
6 diff
(99.3 %id)
AW380633 head_neck .a-u 44 to 523 10 to 486       477/502
(95 %)
9 diff
(98.3 %id)
AW949283 prostate_tumor .a-u 44 to 291 1 to 248       248/248
(100 %)
7 diff
(97.2 %id)
BU848782 ovary, teratocarcinoma, cell line .a-u 45 to 774 1 to 729 exact     729/1019
(71 %)
4 diff
(99.7 %id)
TI_1948090119   .a-u 45 to 234 126 to 315   fully sequenced,   190/212
(89 %)
5 diff
(97.7 %id)
TI_1948090255   .a-u 45 to 243 118 to 316   fully sequenced,   199/219
(90 %)
5 diff
(97.8 %id)
TI_1948090381   .a-u 45 to 279 123 to 357   fully sequenced,   235/255
(92 %)
5 diff
(98.1 %id)
BF038682 adenocarcinoma, ovary .a-u 46 to 768 1 to 716 T165L V166*     716/905
(79 %)
10 diff
(98.9 %id)
N57286 placenta .a-u 47 to 588 1 to 545       545/546
(99 %)
15 diff
(97.3 %id)
N47840 placenta .a-u 47 to 344 1 to 300   fully sequenced,   300/300
(100 %)
9 diff
(97.0 %id)
AW949963   .a-u 49 to 383 1 to 335       335/335
(100 %)
13 diff
(96.2 %id)
AW950034   .a-u 49 to 686 1 to 638       638/639
(99 %)
5 diff
(99.3 %id)
TI_1948089998   .a-u 51 to 691 139 to 779       641/1379
(46 %)
7 diff
(99.5 %id)
AB451259   .a-u 52 to 692 1 to 641       641/642
(99 %)
1 diff
(99.9 %id)
AB451385   .a-u 52 to 690 1 to 639       639/639
(100 %)
0 diff
(100 %id)
CV026212 mixed .a-u 52 to 621 1 to 570       570/570
(100 %)
3 diff
(99.5 %id)
CF130684 Chondrosarcoma Lung Metastasis cell lines, lung .a-u 52 to 772 1 to 720 P19L V20*     720/742
(97 %)
4 diff
(99.5 %id)
TI_154192696   .a-u 52 to 772 51 to 770 P19L V20*     720/998
(72 %)
4 diff
(99.6 %id)
BE796184 lung, small cell carcinoma .a-u 53 to 775 1 to 715   AAA   715/715
(100 %)
12 diff
(98.4 %id)
EC480638 Prostate .a-u 54 to 175 1 to 120       120/120
(100 %)
9 diff
(92.5 %id)
EC495141 Prostate .a-u 54 to 175 1 to 124       124/124
(100 %)
8 diff
(93.6 %id)
EC509640 Prostate .a-u 54 to 175 1 to 125       125/125
(100 %)
9 diff
(92.8 %id)
EC581989 Prostate .a-u 54 to 175 1 to 125       125/125
(100 %)
9 diff
(92.8 %id)
BI827871 brain, medulla .a-u 54 to 729 1 to 677   AAA   677/728
(92 %)
5 diff
(99.4 %id)
AA188633   .a-u 56 to 411 1 to 358   fully sequenced,   358/358
(100 %)
12 diff
(96.7 %id)
BF035411 adenocarcinoma, ovary .a-u 56 to 772 1 to 708       708/944
(75 %)
25 diff
(97.4 %id)
BF757237 colon .a-u 57 to 259 6 to 212       207/212
(97 %)
6 diff
(97.2 %id)
BE813863 breast_normal .a-u 58 to 425 1 to 369       369/369
(100 %)
5 diff
(98.7 %id)
BF940776 brain, glioblastoma (pooled) .a-u 58 to 775 719 to 2       718/719
(99 %)
0 diff
(100 %id)
BE856388 brain, glioblastoma (pooled) .a-u 61 to 773 710 to 1       710/710
(100 %)
13 diff
(98.2 %id)
BM821068 stomach .a-u 61 to 561 1 to 500       500/500
(100 %)
4 diff
(99.2 %id)
AI884963 anaplastic oligodendroglioma, brain .a-u 67 to 515 449 to 1       449/449
(100 %)
2 diff
(99.6 %id)
CK821774 Pancreas, Purified pancreatic islet .a-u 90 to 630 1 to 540     Submitted on the opposite strand 540/540
(100 %)
1 diff
(99.9 %id)
N41566.
matches multiple genes
placenta .a-u 94 to 719 1 to 620     also hits gene TAF9B 620/622
(99 %)
34 diff
(94.6 %id)
W46507 senescent fibroblast .a-u 94 to 418 1 to 332   fully sequenced,   332/332
(100 %)
11 diff
(96.7 %id)
W07482 lung .a-u 99 to 625 14 to 539       526/539
(97 %)
5 diff
(99.1 %id)
AI189287 placenta .a-u 100 to 773 706 to 37   AAA   670/702
(95 %)
66 diff
(90.6 %id)
TI_154192163   .a-u 114 to 775 50 to 711   AAA   662/662
(100 %)
4 diff
(99.4 %id)
CF130221 Chondrosarcoma Lung Metastasis cell lines, lung .a-u 115 to 775 1 to 661   AAA   661/661
(100 %)
4 diff
(99.4 %id)
BM312015 Pancreas, Purified pancreatic islet .a-u 117 to 573 1 to 457       457/457
(100 %)
1 diff
(99.8 %id)
BQ334576 marrow .a-u 126 to 443 1 to 316       316/318
(99 %)
20 diff
(93.8 %id)
BF896116 marrow .a-u 137 to 439 11 to 314       304/316
(96 %)
22 diff
(93.1 %id)
BP431922   .a-u 141 to 478 1 to 338       338/338
(100 %)
3 diff
(99.2 %id)
R31477 placenta .a-u 142 to 404 1 to 266   fully sequenced,   266/266
(100 %)
11 diff
(95.9 %id)
BM043017 carcinoma, cell line, Prostate .a-u 147 to 762 1 to 616       616/929
(66 %)
11 diff
(98.9 %id)
BQ935952 carcinoma, cell line, Prostate .a-u 150 to 774 1 to 626       626/653
(95 %)
6 diff
(99.1 %id)
FN166331 breast carcinoma .a-u 157 to 253 95 to 1     Submitted on the opposite strand 95/98
(96 %)
2 diff
(98.0 %id)
AI127176 heart .a-u 158 to 770 613 to 2       612/613
(99 %)
0 diff
(100 %id)
BF173514 blood .a-u 164 to 409 50 to 289       240/290
(82 %)
11 diff
(96.3 %id)
AA557399 breast .a-u 166 to 774 603 to 1       603/603
(100 %)
21 diff
(96.6 %id)
AI346847 adenocarcinoma, colon .a-u 166 to 777 615 to 2       614/616
(99 %)
0 diff
(100 %id)
AI018625 breast .a-u 169 to 775 630 to 23   AAA   608/608
(100 %)
1 diff
(99.9 %id)
AI088128 parathyroid gland, parathyroid tumor .a-u 169 to 773 614 to 10       605/614
(98 %)
0 diff
(100 %id)
AI127167 heart .a-u 169 to 774 608 to 3       606/608
(99 %)
0 diff
(100 %id)
AI202122 anaplastic oligodendroglioma, brain .a-u 169 to 777 611 to 3       609/613
(99 %)
0 diff
(100 %id)
AI609805 brain, glioblastoma (pooled) .a-u 169 to 773 605 to 1       605/605
(100 %)
4 diff
(99.4 %id)
AI598180 anaplastic oligodendroglioma, brain .a-u 169 to 774 607 to 2       606/607
(99 %)
0 diff
(100 %id)
AI719540 colon .a-u 169 to 773 610 to 6       605/610
(99 %)
0 diff
(100 %id)
AI831241 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a-u 169 to 768 633 to 31   AAA   603/603
(100 %)
50 diff
(91.8 %id)
BM821630 stomach .a-u 183 to 316 1 to 134       134/134
(100 %)
0 diff
(100 %id)
CK821775 Pancreas, Purified pancreatic islet .a-u 187 to 773 603 to 17   AAA Submitted on the opposite strand 587/587
(100 %)
0 diff
(100 %id)
W16880 lung .a-u 190 to 423 1 to 233   fully sequenced,   233/233
(100 %)
7 diff
(97.0 %id)
AA868837   .a-u 200 to 772 574 to 5       570/574
(99 %)
0 diff
(100 %id)
AI589836 anaplastic oligodendroglioma, brain .a-u 200 to 775 581 to 6       576/581
(99 %)
0 diff
(100 %id)
AI683383 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a-u 200 to 775 576 to 1       576/576
(100 %)
0 diff
(100 %id)
AI660480 colon, colonic mucosa from 3 patients with Crohn'sdisease .a-u 200 to 769 573 to 4       570/573
(99 %)
0 diff
(100 %id)
AI589675 anaplastic oligodendroglioma, brain .a-u 201 to 775 573 to 1       573/573
(100 %)
5 diff
(99.2 %id)
TI_1948090120   .a-u 204 to 699 618 to 120   fully sequenced,   499/618
(80 %)
10 diff
(98.4 %id)
CR614667 Placenta Cot 25-normalized .a-u 208 to 774 1 to 567       567/567
(100 %)
0 diff
(100 %id)
BX397075 Placenta Cot 25-normalized .a-u 208 to 769 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
TI_154005797   .a-u 211 to 773 664 to 102   AAA   563/564
(99 %)
3 diff
(99.5 %id)
TI_1948090256   .a-u 213 to 699 605 to 119   fully sequenced,   487/507
(96 %)
5 diff
(99.1 %id)
AI220541   .a-u 227 to 774 549 to 3       547/549
(99 %)
0 diff
(100 %id)
AI418124 brain, glioblastoma (pooled) .a-u 227 to 773 546 to 1       546/546
(100 %)
3 diff
(99.5 %id)
CF129547 Chondrosarcoma Lung Metastasis cell lines, lung .a-u 227 to 775 1 to 549   AAA   549/549
(100 %)
1 diff
(99.9 %id)
TI_154191265   .a-u 227 to 775 51 to 599   AAA   549/549
(100 %)
1 diff
(99.9 %id)
AA877577 colon, colon tumor RER+ .a-u 228 to 774 551 to 4       548/551
(99 %)
0 diff
(100 %id)
R07384 liver and spleen .a-u 229 to 311 1 to 83       83/83
(100 %)
0 diff
(100 %id)
AW516843 cervix .a-u 229 to 772 541 to 1       541/541
(100 %)
11 diff
(98.0 %id)
AI151482 placenta .a-u 231 to 773 540 to 1       540/540
(100 %)
8 diff
(98.6 %id)
AW026200 brain, glioblastoma (pooled) .a-u 232 to 773 542 to 1       542/542
(100 %)
1 diff
(99.9 %id)
AI479948 anaplastic oligodendroglioma, brain .a-u 233 to 773 562 to 23   AAA   540/540
(100 %)
6 diff
(98.9 %id)
AI564060 anaplastic oligodendroglioma, brain .a-u 237 to 775 532 to 1       532/537
(99 %)
15 diff
(97.3 %id)
TI_154005565   .a-u 238 to 773 637 to 102       536/711
(75 %)
0 diff
(100 %id)
BM686004 eye, Retina Foveal and Macular .a-u 239 to 773 11 to 544   fully sequenced, AAA   534/544
(98 %)
0 diff
(100 %id)
BU076081 Pancreas, Purified pancreatic islet .a-u 243 to 776 534 to 1   fully sequenced,   534/534
(100 %)
1 diff
(99.9 %id)
N31967 placenta .a-u 246 to 773 521 to 1       521/542
(96 %)
14 diff
(97.5 %id)
AI126233 placenta .a-u 248 to 774 527 to 1       527/527
(100 %)
0 diff
(100 %id)
TI_1948090382   .a-u 249 to 699 570 to 119   fully sequenced,   452/472
(95 %)
6 diff
(98.8 %id)
BF438466 brain, glioblastoma (pooled) .a-u 250 to 773 523 to 1       523/523
(100 %)
7 diff
(98.7 %id)
AA147001 uterus .a-u 258 to 519 3 to 267   fully sequenced,   265/267
(99 %)
6 diff
(97.8 %id)
AA760659 germinal center B cell .a-u 259 to 770 519 to 10       510/519
(98 %)
0 diff
(100 %id)
TI_157613923   .a-u 265 to 770 594 to 87   AAA   508/517
(98 %)
18 diff
(96.6 %id)
AA502400 colon .a-u 268 to 774 508 to 4       505/508
(99 %)
0 diff
(100 %id)
AI077654 senescent fibroblast .a-u 268 to 403 136 to 1       136/136
(100 %)
0 diff
(100 %id)
W77912 heart .a-u 270 to 718 1 to 449       449/449
(100 %)
58 diff
(87.1 %id)
AI204308 lung .a-u 270 to 774 506 to 2       505/506
(99 %)
0 diff
(100 %id)
AI159883 brain, glioblastoma (pooled) .a-u 273 to 775 503 to 1       503/503
(100 %)
1 diff
(99.9 %id)
AI185286 lung .a-u 274 to 774 501 to 5       497/505
(98 %)
0 diff
(100 %id)
AA740261 2 pooled tumors (clear cell type), Kidney .a-u 275 to 774 496 to 4       493/500
(98 %)
0 diff
(100 %id)
AA515395 colon .a-u 279 to 774 493 to 1       493/502
(98 %)
10 diff
(98.1 %id)
BE221460 malignant melanoma, metastatic to lymphnode, skin .a-u 279 to 775 499 to 3       497/621
(80 %)
0 diff
(100 %id)
TI_154038613   .a-u 282 to 775 576 to 83   AAA   494/917
(53 %)
5 diff
(99.5 %id)
CA444747 lung, Metastatic Chondrosarcoma .a-u 282 to 775 511 to 18   AAA   494/495
(99 %)
5 diff
(99.0 %id)
AW073157 brain, glioblastoma (pooled) .a-u 289 to 775 483 to 2       482/495
(97 %)
0 diff
(100 %id)
AI207370 placenta .a-u 293 to 775 495 to 12   AAA   484/487
(99 %)
3 diff
(99.4 %id)
AI149743   .a-u 298 to 770 489 to 17   AAA   473/473
(100 %)
0 diff
(100 %id)
AA748847 germinal center B cell .a-u 304 to 774 480 to 9       472/480
(98 %)
0 diff
(100 %id)
AA938717 germinal center B cell .a-u 304 to 773 485 to 17   AAA   469/469
(100 %)
6 diff
(98.8 %id)
AI077628 senescent fibroblast .a-u 304 to 403 100 to 1       100/100
(100 %)
0 diff
(100 %id)
AI760180 pooled .a-u 304 to 774 470 to 1       470/470
(100 %)
1 diff
(99.8 %id)
AW316807 brain, three pooled meningiomas .a-u 307 to 776 470 to 1       470/470
(100 %)
12 diff
(97.5 %id)
AI148437   .a-u 308 to 774 471 to 5       467/471
(99 %)
0 diff
(100 %id)
AI056489 brain, glioblastoma (pooled) .a-u 309 to 776 468 to 1       468/468
(100 %)
0 diff
(100 %id)
N32621 placenta .a-u 314 to 773 453 to 1   fully sequenced,   453/453
(100 %)
6 diff
(98.7 %id)
AI923811 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a-u 316 to 774 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AA176399 muscle, skeletal muscle .a-u 328 to 770 443 to 3       441/443
(99 %)
0 diff
(100 %id)
AI276786 adenocarcinoma, colon .a-u 329 to 777 449 to 2       448/449
(99 %)
0 diff
(100 %id)
BF221660 pooled .a-u 331 to 774 448 to 5       444/448
(99 %)
0 diff
(100 %id)
BM311422 Pancreas, Purified pancreatic islet .a-u 333 to 774 447 to 6       442/539
(82 %)
0 diff
(100 %id)
BM663651 eye, Retina Foveal and Macular .a-u 336 to 773 454 to 18   fully sequenced, AAA   437/437
(100 %)
2 diff
(99.6 %id)
DN949340.
matches multiple genes
Islets of Langerhans, Pancreas .a-u 338 to 529 1 to 192     also hits gene PSMB3 192/192
(100 %)
0 diff
(100 %id)
R26060 placenta .a-u 340 to 774 437 to 2       436/439
(99 %)
0 diff
(100 %id)
AI342546 lung .a-u 340 to 773 454 to 21   AAA   434/445
(97 %)
6 diff
(98.7 %id)
AA610193 breast .a-u 341 to 611 271 to 1       271/271
(100 %)
15 diff
(94.5 %id)
H94097 placenta .a-u 345 to 747 402 to 1   fully sequenced,   402/402
(100 %)
6 diff
(98.6 %id)
AA508898 Prostate .a-u 353 to 773 436 to 20   AAA   417/418
(99 %)
15 diff
(96.5 %id)
AI306658 2 pooled tumors (clear cell type), Kidney .a-u 354 to 773 425 to 6       420/425
(98 %)
0 diff
(100 %id)
AI423777 brain, glioblastoma (pooled) .a-u 355 to 771 418 to 1       418/418
(100 %)
1 diff
(99.8 %id)
AI015053   .a-u 359 to 773 429 to 18   AAA   412/416
(99 %)
12 diff
(97.2 %id)
AA824416 germinal center B cell .a-u 360 to 770 425 to 16   AAA   410/410
(100 %)
5 diff
(98.8 %id)
AI572521 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a-u 373 to 775 417 to 5       413/426
(96 %)
0 diff
(100 %id)
R31478 placenta .a-u 374 to 775 403 to 1   fully sequenced,   403/403
(100 %)
12 diff
(97.1 %id)
AI084101 anaplastic oligodendroglioma, brain .a-u 374 to 775 432 to 31   AAA   402/402
(100 %)
3 diff
(99.3 %id)
AA503270 Prostate .a-u 375 to 770 9 to 401       393/401
(98 %)
6 diff
(98.6 %id)
T90190 liver and spleen .a-u 379 to 763 391 to 7   fully sequenced,   385/391
(98 %)
0 diff
(100 %id)
AA188782   .a-u 381 to 776 398 to 1   fully sequenced,   398/398
(100 %)
12 diff
(97.0 %id)
N30791 placenta .a-u 388 to 775 387 to 2       386/387
(99 %)
0 diff
(100 %id)
W46399 senescent fibroblast .a-u 388 to 773 381 to 1   fully sequenced,   381/381
(100 %)
8 diff
(98.0 %id)
BM793174 Ascites, stomach .a-u 388 to 773 414 to 29   AAA Submitted on the opposite strand 386/386
(100 %)
5 diff
(98.8 %id)
N92492 lung .a-u 393 to 781 379 to 1   fully sequenced,   379/379
(100 %)
8 diff
(97.9 %id)
T27837 Kidney .a-u 395 to 773 379 to 1       379/379
(100 %)
3 diff
(99.3 %id)
T66815 liver and spleen .a-u 398 to 774 383 to 4   fully sequenced,   380/383
(99 %)
0 diff
(100 %id)
AA040326 heart .a-u 415 to 775 357 to 1   fully sequenced,   357/357
(100 %)
9 diff
(97.5 %id)
AA910372 Kidney .a-u 416 to 774 361 to 4       358/361
(99 %)
0 diff
(100 %id)
R80777 placenta .a-u 418 to 771 368 to 1   fully sequenced,   368/368
(100 %)
18 diff
(95.2 %id)
AW000726 Prostate .a-u 419 to 772 356 to 3       354/356
(99 %)
0 diff
(100 %id)
AJ572090 pectoral muscle (after mastectomy) .a-u 420 to 613 1 to 192       192/192
(100 %)
4 diff
(98.0 %id)
H13673 placenta .a-u 420 to 772 360 to 1   fully sequenced,   360/360
(100 %)
16 diff
(95.6 %id)
F31082 pectoral muscle (after mastectomy) .a-u 420 to 725 1 to 308       308/308
(100 %)
5 diff
(98.4 %id)
F29660 pectoral muscle (after mastectomy) .a-u 425 to 689 1 to 264       264/264
(100 %)
1 diff
(99.7 %id)
BJ994666 hepatoblastoma .a-u 436 to 737 302 to 1   fully sequenced,   302/302
(100 %)
0 diff
(100 %id)
T81788 liver and spleen .a-u 437 to 774 339 to 1       339/346
(97 %)
14 diff
(96.0 %id)
CA434015 Bone, Subchondral Bone .a-u 438 to 773 354 to 19   AAA   336/336
(100 %)
0 diff
(100 %id)
AW246626 lung, small cell carcinoma .a-u 439 to 773 345 to 11   AAA   335/335
(100 %)
5 diff
(98.6 %id)
AA714481 synovial sarcoma .a-u 440 to 770 342 to 13   AAA   330/330
(100 %)
2 diff
(99.4 %id)
DW434914 Liver .a-u 441 to 681 17 to 257       241/257
(93 %)
6 diff
(97.7 %id)
AI219278 placenta .a-u 441 to 773 333 to 1       333/333
(100 %)
0 diff
(100 %id)
AW015828   .a-u 443 to 775 348 to 16   AAA   333/333
(100 %)
1 diff
(99.7 %id)
TI_154191449   .a-u 456 to 773 426 to 108   AAA Submitted on the opposite strand 319/914
(34 %)
5 diff
(99.5 %id)
AI675837 Prostate .a-u 461 to 774 315 to 2       314/315
(99 %)
0 diff
(100 %id)
F36365 pectoral muscle (after mastectomy) .a-u 470 to 616 12 to 156       145/156
(92 %)
6 diff
(96.2 %id)
CF129694 Chondrosarcoma Lung Metastasis cell lines, lung .a-u 473 to 773 359 to 58   AAA Submitted on the opposite strand 302/302
(100 %)
5 diff
(98.4 %id)
BM476942 leiomyosarcoma, uterus .a-u 479 to 773 1 to 295   AAA   295/295
(100 %)
7 diff
(97.7 %id)
BM662666 eye, optic nerve .a-u 479 to 773 313 to 19   fully sequenced, AAA   295/295
(100 %)
2 diff
(99.4 %id)
AA147002 uterus .a-u 489 to 779 282 to 1   fully sequenced,   282/282
(100 %)
11 diff
(96.1 %id)
CA450399 Human Lung Epithelial cells, lung .a-u 533 to 773 259 to 19   AAA   241/245
(98 %)
3 diff
(98.8 %id)
BF437691 Prostate .a-u 562 to 773 212 to 1       212/212
(100 %)
0 diff
(100 %id)
DW460914 Liver .a-u 579 to 701 10 to 133       124/133
(93 %)
6 diff
(95.5 %id)
BP432913   .a-u 586 to 775 1 to 190   AAA   190/190
(100 %)
4 diff
(97.9 %id)
AA642564 normal prostate, Prostate .a-u 603 to 775 177 to 6       172/177
(97 %)
0 diff
(100 %id)
N75841 lung .a-u 634 to 773 137 to 1       137/139
(98 %)
5 diff
(96.5 %id)
BX348292 Placenta Cot 25-normalized .a-u 650 to 774 1 to 125       125/131
(95 %)
3 diff
(97.8 %id)
BQ940876 sciatic nerve .a-u 758 to 1410 5 to 669   tiling clone,   665/1318
(50 %)
22 diff
(98.4 %id)
BM999489 Fibrosarcoma .a-u 942 to 1720 798 to 19   tiling clone, AAA   780/781
(99 %)
7 diff
(99.2 %id)
AV706239 adrenal gland .a-u 1225 to 1587 1 to 363       363/364
(99 %)
2 diff
(99.5 %id)
CN294960 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a-u 1297 to 1702 1 to 406       406/406
(100 %)
0 diff
(100 %id)
AA508003 Prostate .a-u 1393 to 1761 1 to 369   tiling clone,   369/369
(100 %)
3 diff
(99.2 %id)
DW436776 Liver Gene HIST1H1C, variant not shown         Suspected internal deletion, this clone was ignored    
BU532166 mixed (pool of 40 RNAs) Gene HIST1H1C, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes CI