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Gene HFE2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
107 supporting clones for gene HFE2 back to top
cDNA accession
Links to the sequence		 Tissue

most 5' clones
in red		 Match
mRNA		 From bp
to bp
in mRNA		 From bp
to bp
in accs.		 Clone encodes
complete protein
(with AA variation)		 Features Anomalies
detected by
AceView		 Accession
match over
(% length)		 Base differences
relative to genome
(% identity)
F00368 leg muscle, skeletal muscle .d-u 811 to 1046 236 to 1       236/236
(100 %)		 0 diff
(100 %id)
Z25222 leg muscle, skeletal muscle .a 477 to 813 1 to 336       336/337
(99 %)		 9 diff
(97.4 %id)
AJ707910 heart .d-u 112 to 640 534 to 8     Submitted on the opposite strand 527/534
(98 %)		 0 diff
(100 %id)
AK092682 skeletal muscle .b 183 to 2121 1 to 1936 K186E available from FLJ,   1936/1936
(100 %)		 3 diff
(99.9 %id)
AK092692 skeletal muscle .g 116 to 1505 1 to 1390 exact tiling clone, available from FLJ,   1390/1390
(100 %)		 0 diff
(100 %id)
AK096905 skeletal muscle .c 88 to 1468 1 to 1381 exact tiling clone, available from FLJ,   1381/1381
(100 %)		 1 diff
(100.0 %id)
AK124273 liver, tumor tissue .a 116 to 2211 1 to 2096 exact tiling clone, available from FLJ,   2096/2096
(100 %)		 0 diff
(100 %id)
AK223575 heart .b 176 to 2121 1 to 1947 P291S L292S S293F S294L A295S ... AAA   1947/1947
(100 %)		 1 diff
(100.0 %id)
AK290831 Liver .b 184 to 1602 1 to 1419       1419/1419
(100 %)		 0 diff
(100 %id)
AK292742 liver, tumor tissue .a 90 to 2056 1 to 1967 D149G     1967/1967
(100 %)		 2 diff
(99.9 %id)
AK315852 liver, tumor tissue .b 183 to 1684 1 to 1502       1502/1502
(100 %)		 0 diff
(100 %id)
AX747669   .b 183 to 2121 1 to 1936 K186E     1936/1936
(100 %)		 3 diff
(99.9 %id)
AX747673   .g 116 to 1505 1 to 1390 exact     1390/1390
(100 %)		 0 diff
(100 %id)
AY372521 Liver .a 325 to 1605 1 to 1281 exact     1281/1281
(100 %)		 0 diff
(100 %id)
Z25287 leg muscle, skeletal muscle .d-u 451 to 788 1 to 338       338/338
(100 %)		 1 diff
(99.8 %id)
Z28893 leg muscle, skeletal muscle .d-u 786 to 1047 268 to 7       262/268
(97 %)		 0 diff
(100 %id)
BC085604 Peripheral Nervous System, sympathetictrunk .b 243 to 2124 1 to 1882   tiling clone, available from MGC, AAA   1882/1882
(100 %)		 0 diff
(100 %id)
BF826947 head_normal .a 980 to 1306 328 to 1     Submitted on the opposite strand 328/332
(98 %)		 7 diff
(97.9 %id)
BX106564 liver and spleen .d-u 170 to 868 1 to 699       699/699
(100 %)		 1 diff
(99.9 %id)
F00348 leg muscle, skeletal muscle .d-u 858 to 1046 189 to 1       189/189
(100 %)		 0 diff
(100 %id)
Z25389 leg muscle, skeletal muscle .d-u 6 to 345 1 to 341       341/341
(100 %)		 3 diff
(99.2 %id)
CR616174 fetal liver .b 231 to 2109 1 to 1879       1879/1879
(100 %)		 0 diff
(100 %id)
BX388094   .a 1174 to 2189 1017 to 1       1017/1017
(100 %)		 4 diff
(99.7 %id)
BX388095   .a 122 to 1084 1 to 956       956/956
(100 %)		 15 diff
(98.5 %id)
BX405917 fetal liver, Liver .b 1148 to 2109 957 to 1   fully sequenced,   957/957
(100 %)		 9 diff
(99.1 %id)
BX405918 fetal liver, Liver .b 231 to 1178 1 to 946   fully sequenced,   946/946
(100 %)		 3 diff
(99.7 %id)
EL735436 mixed .a 1003 to 1594 1 to 592       592/592
(100 %)		 1 diff
(99.9 %id)
DA536527 heart .b 184 to 659 2 to 477   capped   476/476
(100 %)		 0 diff
(100 %id)
AV682627 hepatocellular carcinoma .a 1101 to 1552 1 to 452       452/452
(100 %)		 1 diff
(99.8 %id)
AV646291 corresponding non cancerous liver tissue .d-u 641 to 1046 1 to 406   AAA Submitted on the opposite strand 406/406
(100 %)		 0 diff
(100 %id)
AV719315 corresponding non cancerous liver tissue .d-u 551 to 1046 507 to 12     Submitted on the opposite strand 496/507
(97 %)		 0 diff
(100 %id)
AV659719 corresponding non cancerous liver tissue .a 809 to 1228 1 to 420     Submitted on the opposite strand 420/420
(100 %)		 11 diff
(97.4 %id)
AV720180 corresponding non cancerous liver tissue .d-u 594 to 1046 1 to 453   AAA   453/453
(100 %)		 1 diff
(99.8 %id)
AV662118 corresponding non cancerous liver tissue .a 764 to 1180 1 to 417     Submitted on the opposite strand 417/417
(100 %)		 0 diff
(100 %id)
DA561377 heart .b 184 to 754 2 to 572   capped   571/571
(100 %)		 0 diff
(100 %id)
BJ994784 hepatoblastoma .b 212 to 612 1 to 401       401/401
(100 %)		 0 diff
(100 %id)
BJ994785 hepatoblastoma .b 1561 to 2084 524 to 1       524/524
(100 %)		 0 diff
(100 %id)
T98798 liver and spleen .d-u 720 to 1047 343 to 9       335/457
(73 %)		 0 diff
(100 %id)
T99107 liver and spleen .d-u 37 to 353 1 to 327       327/332
(98 %)		 13 diff
(96.1 %id)
H59400 liver and spleen .d-u 170 to 627 1 to 465   fully sequenced,   465/465
(100 %)		 20 diff
(95.7 %id)
H60056 liver and spleen .d-u 605 to 1044 453 to 1   fully sequenced,   453/453
(100 %)		 26 diff
(94.3 %id)
AA181502 muscle, skeletal muscle .d-u 854 to 1046 216 to 1   fully sequenced,   216/216
(100 %)		 0 diff
(100 %id)
AA182396 muscle, skeletal muscle .d-u 544 to 1038 1 to 495   fully sequenced,   495/495
(100 %)		 8 diff
(98.4 %id)
AA181509 muscle, skeletal muscle .d-u 809 to 1047 253 to 1   fully sequenced,   253/253
(100 %)		 0 diff
(100 %id)
AA182918 muscle, skeletal muscle .d-u 544 to 1038 1 to 495   fully sequenced,   495/495
(100 %)		 10 diff
(98.0 %id)
AA181515 muscle, skeletal muscle .d-u 859 to 1047 189 to 1   fully sequenced,   189/189
(100 %)		 0 diff
(100 %id)
AA182923 muscle, skeletal muscle .d-u 544 to 1046 1 to 505   fully sequenced,   505/505
(100 %)		 9 diff
(98.3 %id)
AA176443.
matches multiple genes		 muscle, skeletal muscle .d-u 584 to 997 414 to 1     also hits gene SLC39A3andDIRAS1 414/415
(99 %)		 0 diff
(100 %id)
AA178889 muscle, skeletal muscle .d-u 272 to 678 1 to 409       409/409
(100 %)		 2 diff
(99.6 %id)
AA479147 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d-u 575 to 844 1 to 269   fully sequenced,   269/269
(100 %)		 2 diff
(99.3 %id)
AA479148 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d-u 814 to 1051 239 to 1   fully sequenced,   239/239
(100 %)		 2 diff
(99.2 %id)
AA948096 pooled .d-u 530 to 1047 520 to 4       517/520
(99 %)		 0 diff
(100 %id)
AA993691   .d-u 638 to 1046 422 to 14   AAA   409/409
(100 %)		 0 diff
(100 %id)
AI084581 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d-u 637 to 1046 409 to 1       409/409
(100 %)		 1 diff
(99.8 %id)
AI190465 heart .d-u 614 to 1047 442 to 9       434/442
(98 %)		 0 diff
(100 %id)
AI243087 liver and spleen .d-u 854 to 1049 196 to 1   tiling clone,   196/196
(100 %)		 0 diff
(100 %id)
AI580838   .d-u 638 to 1047 415 to 6       410/415
(98 %)		 0 diff
(100 %id)
AI810387 Prostate .d-u 551 to 1046 515 to 20   tiling clone, AAA   496/496
(100 %)		 2 diff
(99.6 %id)
AI701328 Prostate .d-u 759 to 1017 259 to 1       259/259
(100 %)		 0 diff
(100 %id)
BF695330 muscle (skeletal) .d-u 58 to 743 1 to 687 V48C L61*     687/687
(100 %)		 29 diff
(95.8 %id)
BF694710 muscle (skeletal) .d-u 127 to 825 1 to 680       680/841
(80 %)		 22 diff
(97.4 %id)
BF693790 muscle (skeletal) .d-u 33 to 711 1 to 686 A71Q A72L Q73R A74Q A75H ...     686/686
(100 %)		 19 diff
(97.3 %id)
BF575003 muscle (skeletal) .d-u 22 to 716 1 to 701 F58L D59M V60F L61N I62F ...     701/708
(99 %)		 43 diff
(94.0 %id)
BF577065 muscle (skeletal) .d-u 155 to 767 1 to 614       614/615
(99 %)		 3 diff
(99.6 %id)
BC017926 skeletal muscle .g 87 to 1502 1 to 1416 exact available from MGC, AAA   1416/1416
(100 %)		 1 diff
(100.0 %id)
BF671671 muscle (skeletal) .g 86 to 741 1 to 649   tiling clone, available from MGC,   649/861
(75 %)		 25 diff
(97.1 %id)
BF790324 muscle (skeletal) .d-u 157 to 823 1 to 667   tiling clone,   667/876
(76 %)		 12 diff
(98.7 %id)
BQ924158 sciatic nerve .b 245 to 955 30 to 751       720/846
(85 %)		 26 diff
(97.0 %id)
CB161759 Liver .d-u 28 to 525 1 to 498 H54L     498/498
(100 %)		 1 diff
(99.8 %id)
DA639130 Liver .b 1 to 396 2 to 399   tiling clone, capped   398/398
(100 %)		 2 diff
(99.5 %id)
DA639450 Liver .b 185 to 720 2 to 537   capped   536/536
(100 %)		 0 diff
(100 %id)
NM_145277.4   .b 96 to 2124 1 to 2029   RefSeq, AAA   2029/2029
(100 %)		 0 diff
(100 %id)
NM_202004.3   .g 1 to 1505 2 to 1506 exact RefSeq, AAA   1506/1506
(100 %)		 0 diff
(100 %id)
NM_213652.3   .c 1 to 1468 2 to 1469 exact RefSeq, AAA   1469/1469
(100 %)		 0 diff
(100 %id)
NM_213653.3   .a 1 to 2214 2 to 2215 exact RefSeq, AAA   2215/2215
(100 %)		 0 diff
(100 %id)
DA761183 tongue .a 88 to 540 2 to 454   capped   453/453
(100 %)		 0 diff
(100 %id)
DA762328 tongue .e 1 to 532 5 to 537   tiling clone, capped   536/536
(100 %)		 1 diff
(99.9 %id)
DA762698 tongue .b 185 to 752 2 to 569   capped   568/568
(100 %)		 0 diff
(100 %id)
DA764273 tongue .a 88 to 617 2 to 531   tiling clone, capped   530/530
(100 %)		 0 diff
(100 %id)
DA764726 tongue .e 1 to 560 4 to 563 exact tiling clone, capped   562/562
(100 %)		 1 diff
(99.9 %id)
DA767448 tongue .a 88 to 632 2 to 546   capped   545/545
(100 %)		 1 diff
(99.9 %id)
DA821417 pericardium .b 179 to 745 2 to 569   capped   568/568
(100 %)		 1 diff
(99.9 %id)
DA822889 pericardium .b 184 to 639 2 to 457   capped   456/456
(100 %)		 0 diff
(100 %id)
DA823736 pericardium .b 177 to 634 2 to 459   capped   458/466
(98 %)		 1 diff
(99.8 %id)
DA826111 pericardium .b 180 to 639 2 to 461   capped   460/460
(100 %)		 0 diff
(100 %id)
DA827194 pericardium .b 216 to 777 2 to 563   capped   562/562
(100 %)		 0 diff
(100 %id)
F26701 pectoral muscle (after mastectomy) .d-u 797 to 1036 20 to 258       239/258
(92 %)		 6 diff
(97.7 %id)
TI_1948219671   .a 1001 to 1604 731 to 127       605/1465
(41 %)		 0 diff
(100 %id)
TI_1948219935   .a 995 to 1604 126 to 738       613/1306
(46 %)		 6 diff
(99.6 %id)
TI_1948220249   .a 1002 to 1604 145 to 747       603/1251
(48 %)		 1 diff
(100.0 %id)
TI_1948220251   .a 1056 to 1604 677 to 129       549/576
(95 %)		 0 diff
(100 %id)
TI_1948220534   .a 995 to 1600 127 to 735       609/1298
(46 %)		 6 diff
(99.6 %id)
TI_1948220536   .a 1008 to 1604 730 to 129       602/1413
(42 %)		 0 diff
(100 %id)
F34953 pectoral muscle (after mastectomy) .d-u 709 to 1046 1 to 338       338/338
(100 %)		 2 diff
(99.5 %id)
F35827 pectoral muscle (after mastectomy) .d-u 794 to 1027 1 to 232       232/232
(100 %)		 5 diff
(97.9 %id)
DA893500 skeletal muscle .f 1 to 502 5 to 506 exact tiling clone, capped   505/505
(100 %)		 0 diff
(100 %id)
DA893548 skeletal muscle .b 184 to 702 2 to 517   capped   516/516
(100 %)		 1 diff
(99.9 %id)
DB330904 skeletal muscle .b 1691 to 2116 431 to 6       426/431
(98 %)		 0 diff
(100 %id)
DA893726 skeletal muscle .b 184 to 652 2 to 470   capped   469/469
(100 %)		 0 diff
(100 %id)
DA893853 skeletal muscle .a 117 to 618 2 to 501   capped   500/509
(98 %)		 2 diff
(99.7 %id)
DA894010 skeletal muscle .b 184 to 691 2 to 509   capped   508/508
(100 %)		 1 diff
(99.9 %id)
DA894712 skeletal muscle .g 117 to 675 2 to 560   capped   559/559
(100 %)		 0 diff
(100 %id)
DB330988 skeletal muscle .g 976 to 1505 530 to 1       530/530
(100 %)		 0 diff
(100 %id)
DA895371 skeletal muscle .b 187 to 723 2 to 538   capped   537/537
(100 %)		 0 diff
(100 %id)
DA898471 skeletal muscle .g 88 to 655 2 to 569   capped   568/568
(100 %)		 1 diff
(99.9 %id)
DA899070 skeletal muscle .d-u 1 to 497 2 to 498 L83P tiling clone, capped   497/497
(100 %)		 1 diff
(99.8 %id)
DA899228 skeletal muscle .c 89 to 659 2 to 572   capped   571/571
(100 %)		 0 diff
(100 %id)
DB331086 skeletal muscle .c 921 to 1468 549 to 1       549/549
(100 %)		 2 diff
(99.7 %id)
DA900487 skeletal muscle .b 184 to 712 2 to 530   capped   529/529
(100 %)		 0 diff
(100 %id)
DR003992 Liver .b 211 to 860 1 to 649       649/649
(100 %)		 3 diff
(99.6 %id)
DR004102 Liver .b 233 to 933 1 to 697       697/697
(100 %)		 8 diff
(98.9 %id)
DB035674 testis .b 97 to 615 2 to 520   capped   519/525
(98 %)		 2 diff
(99.7 %id)
DB181164 liver, tumor tissue .b 186 to 746 2 to 562   capped   561/561
(100 %)		 1 diff
(99.9 %id)
DB182300 liver, tumor tissue .b 184 to 743 2 to 561   capped   560/560
(100 %)		 0 diff
(100 %id)
DB182797 liver, tumor tissue .a 91 to 555 2 to 466   capped   465/465
(100 %)		 0 diff
(100 %id)
DB183431 liver, tumor tissue .b 184 to 764 2 to 582   capped   581/581
(100 %)		 0 diff
(100 %id)
DB183466 liver, tumor tissue .a 117 to 627 2 to 514   capped   513/513
(100 %)		 2 diff
(99.7 %id)
DB347621 liver, tumor tissue .a 1692 to 2211 520 to 1       520/520
(100 %)		 0 diff
(100 %id)
DB187496 liver, tumor tissue .a 117 to 687 2 to 572   capped   571/571
(100 %)		 1 diff
(99.9 %id)
DB187856 liver, tumor tissue .b 186 to 749 2 to 565   capped   564/564
(100 %)		 0 diff
(100 %id)
DA894712 skeletal muscle .g 117 to 675 2 to 560   capped   559/559
(100 %)		 0 diff
(100 %id)
DB330988 skeletal muscle .g 976 to 1505 530 to 1       530/530
(100 %)		 0 diff
(100 %id)
DA895371 SKMUS2002906 HFE2.bAug10 723 538 SKMUS2002906     537 0
DA898471 SKMUS2006768 HFE2.gAug10 655 569 SKMUS2006768     568 1
DA899070 SKMUS2007550 HFE2.dAug10-unspliced 497 498 SKMUS2007550     497 1
DA899228 SKMUS2007740 HFE2.cAug10 659 572 SKMUS2007740     571 0
DB331086 SKMUS2007740 HFE2.cAug10 1468 1 SKMUS2007740     549 2
DA900487 SKMUS2009290 HFE2.bAug10 712 530 SKMUS2009290     529 0
DR003992 TC104646 HFE2.bAug10 860 649 TC104646     649 3
DR004102 TC124916 HFE2.bAug10 933 697 TC124916     697 8
DB035674 TESTI2021117 HFE2.bAug10 615 520 TESTI2021117     519 2
DB181164 TLIVE1000113 HFE2.bAug10 746 562 TLIVE1000113     561 1
DB182300 TLIVE2001276 HFE2.bAug10 743 561 TLIVE2001276     560 0
DB182797 TLIVE2001893 HFE2.aAug10 555 466 TLIVE2001893     465 0
DB183431 TLIVE2002650 HFE2.bAug10 764 582 TLIVE2002650     581 0
DB183466 TLIVE2002690 HFE2.aAug10 627 514 TLIVE2002690     513 2
DB347621 TLIVE2002690 HFE2.aAug10 2211 1 TLIVE2002690     520 0
DB187496 TLIVE2007640 HFE2.aAug10 687 572 TLIVE2007640     571 1
DB187856 TLIVE2008075 HFE2.bAug10 749 565 TLIVE2008075     564 0
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC