| cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
| BM907120 | brain, hippocampus | .a | 1 to 857 | 14 to 869 | H180T T181H P182R V183L E184R ... | tiling clone, | 856/1074 (79 %) | 24 diff (97.8 %id) | |
| DA770636 | brain | .a | 13 to 589 | 2 to 578 | capped | 577/577 (100 %) | 2 diff (99.7 %id) | ||
| BG576391 | breast, mammary adenocarcinoma, cell line | .a | 99 to 918 | 1 to 830 | K77T Y78I K79* | 830/1104 (75 %) | 22 diff (98.1 %id) | ||
| BX427292 | fetal liver, Liver | .a | 104 to 728 | 1 to 629 | 629/938 (67 %) | 10 diff (99.0 %id) | |||
| DA131069 | alzheimer cortex | .a | 107 to 664 | 2 to 559 | capped | 558/558 (100 %) | 3 diff (99.5 %id) | ||
| CB129696 | Liver | .a | 108 to 633 | 1 to 525 | 525/525 (100 %) | 3 diff (99.5 %id) | |||
| DB088225 | testis | .a | 109 to 671 | 2 to 564 | capped | 563/563 (100 %) | 2 diff (99.7 %id) | ||
| CD300046 | testis | .a | 116 to 826 | 34 to 753 | 720/966 (74 %) | 34 diff (96.5 %id) | |||
| BU570575 | testis | .a | 117 to 830 | 1 to 716 | 716/808 (88 %) | 8 diff (99.1 %id) | |||
| DA527155 | brain | .a | 121 to 706 | 2 to 588 | capped | 587/587 (100 %) | 2 diff (99.7 %id) | ||
| DA025810 | .a | 129 to 700 | 2 to 573 | capped | 572/572 (100 %) | 1 diff (99.9 %id) | |||
| BE439547 | Trabecular meshwork | .a | 129 to 823 | 1 to 688 | 688/688 (100 %) | 11 diff (98.5 %id) | |||
| BU954665 | mixed (pool of 40 RNAs) | .a | 129 to 559 | 1 to 431 | 431/461 (93 %) | 5 diff (99.0 %id) | |||
| AF087896 | .a | 133 to 1165 | 1 to 1032 | exact | AAA | 1032/1032 (100 %) | 2 diff (99.9 %id) | ||
| AA082102 | .a | 133 to 456 | 1 to 324 | 324/324 (100 %) | 3 diff (99.1 %id) | ||||
| BG719965 | testis | .a | 133 to 917 | 1 to 784 | L210W V211W V213W V214* | 784/785 (99 %) | 8 diff (99.0 %id) | ||
| CB151127 | cervix, Uterine | .a | 136 to 675 | 1 to 540 | 540/540 (100 %) | 1 diff (99.9 %id) | |||
| CD701070 | normal nasopharynx | .a | 136 to 509 | 24 to 397 | 374/397 (94 %) | 6 diff (98.5 %id) | |||
| CB140547 | Liver | .a | 136 to 502 | 1 to 367 | 367/367 (100 %) | 1 diff (99.8 %id) | |||
| BM834087 | stomach | .a | 136 to 324 | 1 to 186 | 186/186 (100 %) | 5 diff (97.4 %id) | |||
| DA608823 | .a | 137 to 627 | 2 to 492 | capped | 491/491 (100 %) | 0 diff (100 %id) | |||
| BM790696 | stomach | .a | 137 to 796 | 1 to 659 | 659/659 (100 %) | 1 diff (99.9 %id) | |||
| DA938325 | Spleen | .a | 137 to 732 | 2 to 597 | capped | 596/596 (100 %) | 0 diff (100 %id) | ||
| DB082102 | testis | .a | 137 to 596 | 2 to 461 | capped | 460/460 (100 %) | 0 diff (100 %id) | ||
| BC024242 | testis | .a | 138 to 1641 | 1 to 1504 | exact | tiling clone, available from MGC, AAA | 1504/1504 (100 %) | 1 diff (100.0 %id) | |
| DW414516 | Liver | .a | 138 to 434 | 20 to 316 | 297/316 (93 %) | 8 diff (97.5 %id) | |||
| DW440705 | Liver | .a | 138 to 511 | 11 to 384 | 374/384 (97 %) | 8 diff (98.0 %id) | |||
| CB111124 | Liver | .a | 138 to 669 | 1 to 532 | 532/532 (100 %) | 1 diff (99.9 %id) | |||
| NM_025196.2 | .a | 138 to 1641 | 1 to 1504 | exact | RefSeq, AAA | 1504/1504 (100 %) | 1 diff (100.0 %id) | ||
| DA360294 | subthalamic nucleus | .a | 139 to 690 | 2 to 554 | capped | 553/553 (100 %) | 2 diff (99.7 %id) | ||
| DB262138 | uterus | .a | 139 to 708 | 2 to 571 | capped | 570/570 (100 %) | 1 diff (99.9 %id) | ||
| DB462419 | testis | .a | 140 to 626 | 1 to 487 | 487/487 (100 %) | 0 diff (100 %id) | |||
| CD689283 | normal nasopharynx | .a | 142 to 669 | 19 to 549 | 531/549 (96 %) | 7 diff (98.8 %id) | |||
| BP873477 | embryonal kidney | .a | 142 to 440 | 1 to 299 | 299/299 (100 %) | 1 diff (99.7 %id) | |||
| BG900076 | cartilage | .a | 145 to 441 | 79 to 375 | 297/307 (96 %) | 6 diff (98.1 %id) | |||
| BF683485 | leiomyosarcoma cell line, uterus | .a | 145 to 887 | 1 to 735 | P172L Y173M E174N H175M E176R ... | 735/985 (74 %) | 17 diff (98.3 %id) | ||
| BF686772 | leiomyosarcoma cell line, uterus | .a | 145 to 851 | 1 to 707 | E42R D43T M44W G45V Q46R ... | 707/940 (75 %) | 12 diff (98.8 %id) | ||
| BG941012 | blood | .a | 146 to 499 | 1 to 354 | 354/354 (100 %) | 5 diff (98.6 %id) | |||
| BP272225 | .a | 146 to 732 | 1 to 587 | 587/587 (100 %) | 7 diff (98.9 %id) | ||||
| BP196523 | adrenal gland | .a | 147 to 726 | 1 to 581 | 581/581 (100 %) | 2 diff (99.7 %id) | |||
| BP197524 | adrenal gland | .a | 147 to 726 | 1 to 581 | 581/581 (100 %) | 1 diff (99.9 %id) | |||
| AK312882 | uterus | .a | 147 to 832 | 1 to 686 | exact | 686/686 (100 %) | 0 diff (100 %id) | ||
| CD687243 | normal nasopharynx | .a | 147 to 796 | 37 to 687 | 651/687 (94 %) | 8 diff (98.9 %id) | |||
| BP225295 | .a | 147 to 720 | 1 to 577 | 577/582 (99 %) | 8 diff (98.7 %id) | ||||
| DB445333 | testis | .a | 147 to 582 | 1 to 434 | 434/434 (100 %) | 9 diff (98.0 %id) | |||
| DB479963 | hippocampus | .a | 147 to 553 | 1 to 406 | 406/410 (99 %) | 5 diff (98.8 %id) | |||
| DB480921 | hippocampus | .a | 147 to 624 | 1 to 478 | 478/478 (100 %) | 1 diff (99.8 %id) | |||
| BP260524 | small intestine | .a | 147 to 717 | 1 to 571 | 571/571 (100 %) | 0 diff (100 %id) | |||
| BJ996182 | hepatoblastoma | .a | 147 to 593 | 1 to 447 | 447/447 (100 %) | 0 diff (100 %id) | |||
| CB991740 | placenta, pre-eclamptic placenta | .a | 147 to 755 | 28 to 654 | 627/880 (71 %) | 29 diff (96.8 %id) | |||
| CB106485 | Liver | .a | 147 to 441 | 1 to 296 | 296/297 (99 %) | 4 diff (98.7 %id) | |||
| BP307721 | brain | .a | 147 to 728 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
| BM834079 | stomach | .a | 147 to 704 | 1 to 558 | 558/558 (100 %) | 1 diff (99.9 %id) | |||
| BP342386 | stomach mucosa | .a | 147 to 728 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
| DA012551 | adrenal gland | .a | 148 to 690 | 2 to 545 | capped | 544/544 (100 %) | 3 diff (99.5 %id) | ||
| DA014104 | adrenal gland | .a | 148 to 707 | 2 to 561 | capped | 560/562 (99 %) | 1 diff (99.9 %id) | ||
| DA032817 | .a | 148 to 553 | 2 to 407 | capped | 406/406 (100 %) | 0 diff (100 %id) | |||
| DA156295 | amygdala | .a | 148 to 690 | 2 to 544 | capped | 543/543 (100 %) | 0 diff (100 %id) | ||
| DA158723 | amygdala | .a | 148 to 711 | 2 to 566 | capped | 565/565 (100 %) | 1 diff (99.9 %id) | ||
| DA255246 | caudate nucleus | .a | 148 to 696 | 2 to 551 | capped | 550/550 (100 %) | 2 diff (99.7 %id) | ||
| DA274952 | corpus callosum | .a | 148 to 725 | 2 to 579 | capped | 578/578 (100 %) | 0 diff (100 %id) | ||
| DA340783 | substantia nigra | .a | 148 to 707 | 2 to 561 | capped | 560/560 (100 %) | 0 diff (100 %id) | ||
| DA360016 | subthalamic nucleus | .a | 148 to 716 | 2 to 571 | capped | 570/570 (100 %) | 1 diff (99.9 %id) | ||
| DA469468 | .a | 148 to 704 | 2 to 558 | capped | 557/557 (100 %) | 0 diff (100 %id) | |||
| AL602340 | human skeletal muscle | .a | 148 to 636 | 1 to 488 | 488/488 (100 %) | 9 diff (98.2 %id) | |||
| DA507894 | brain | .a | 148 to 731 | 2 to 585 | capped | 584/584 (100 %) | 0 diff (100 %id) | ||
| DA509383 | brain | .a | 148 to 603 | 2 to 465 | capped | 464/464 (100 %) | 11 diff (97.7 %id) | ||
| DA514822 | brain | .a | 148 to 679 | 2 to 533 | capped | 532/533 (99 %) | 1 diff (99.9 %id) | ||
| DA558566 | .a | 148 to 713 | 2 to 567 | capped | 566/566 (100 %) | 0 diff (100 %id) | |||
| DA619784 | .a | 148 to 737 | 2 to 591 | capped | 590/590 (100 %) | 0 diff (100 %id) | |||
| DA701400 | .a | 148 to 627 | 2 to 481 | capped | 480/480 (100 %) | 1 diff (99.8 %id) | |||
| DA706755 | .a | 148 to 713 | 2 to 567 | capped | 566/566 (100 %) | 1 diff (99.9 %id) | |||
| DA783596 | brain | .a | 148 to 712 | 2 to 568 | capped | 567/567 (100 %) | 2 diff (99.7 %id) | ||
| DA784363 | brain | .a | 148 to 722 | 2 to 576 | capped | 575/575 (100 %) | 0 diff (100 %id) | ||
| DA814661 | .a | 148 to 705 | 2 to 559 | capped | 558/558 (100 %) | 0 diff (100 %id) | |||
| DN996534 | breast cancer, Mammary gland (cancer tissue) | .a | 148 to 795 | 1 to 648 | 648/648 (100 %) | 3 diff (99.6 %id) | |||
| DB262355 | uterus | .a | 148 to 710 | 2 to 564 | capped | 563/563 (100 %) | 0 diff (100 %id) | ||
| AA252446 | germinal center B cell | .a | 149 to 644 | 1 to 494 | 494/494 (100 %) | 5 diff (99.0 %id) | |||
| BF874395 | lung_tumor | .a | 150 to 377 | 232 to 4 | Submitted on the opposite strand | 229/239 (95 %) | 3 diff (98.8 %id) | ||
| BG480531 | choriocarcinoma, placenta | .a | 150 to 882 | 1 to 732 | K77T Y78T K79I R80N A81E ... | 730/739 (98 %) | 12 diff (98.4 %id) | ||
| BI910340 | leukocyte | .a | 150 to 819 | 1 to 671 | 671/671 (100 %) | 3 diff (99.6 %id) | |||
| TI_57236220 | .a | 150 to 819 | 31 to 701 | 671/701 (95 %) | 13 diff (98.2 %id) | ||||
| DA887778 | .a | 150 to 705 | 2 to 557 | capped | 556/556 (100 %) | 0 diff (100 %id) | |||
| CR601403 | placenta | .a | 151 to 1594 | 1 to 1444 | exact | 1444/1444 (100 %) | 0 diff (100 %id) | ||
| AL542571 | placenta | .a | 151 to 1045 | 1 to 883 | exact | fully sequenced, | 883/883 (100 %) | 0 diff (100 %id) | |
| CR622705 | HeLa cells Cot 25-normalized | .a | 152 to 1607 | 1 to 1456 | exact | 1456/1456 (100 %) | 0 diff (100 %id) | ||
| AL555713 | placenta | .a | 152 to 918 | 1 to 763 | A2X L8X V96X E184X | fully sequenced, | 763/763 (100 %) | 0 diff (100 %id) | |
| BM471329 | melanotic melanoma, skin | .a | 152 to 878 | 1 to 728 | L210W V211W V213W V214* | 728/1020 (71 %) | 12 diff (98.9 %id) | ||
| TI_57179966 | .a | 152 to 920 | 27 to 802 | I130T K131* | 776/802 (96 %) | 14 diff (98.3 %id) | |||
| DB123262 | thymus | .a | 152 to 695 | 2 to 545 | capped | 544/544 (100 %) | 1 diff (99.9 %id) | ||
| BP431185 | .a | 153 to 562 | 1 to 412 | 412/412 (100 %) | 6 diff (98.6 %id) | ||||
| EL950566 | eyeball | .a | 155 to 846 | 45 to 736 | exact | 692/736 (94 %) | 6 diff (99.2 %id) | ||
| CT001584 | T-Lymphocytes | .a | 155 to 851 | 1 to 700 | E184X K186E E187G P188A G189R ... | 700/703 (99 %) | 7 diff (99.1 %id) | ||
| BU567175 | mixed (pool of 40 RNAs) | .a | 157 to 579 | 1 to 422 | AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 422/434 (97 %) | 11 diff (97.5 %id) | |
| BI772393 | pooled lung and spleen | .a | 158 to 920 | 1 to 770 | I130T K131* | 770/770 (100 %) | 8 diff (99.0 %id) | ||
| BG176826 | lymph, lymphoma, cell line | .a | 160 to 896 | 1 to 730 | V197W Y199T K200S L201C H202M ... | 730/1044 (69 %) | 19 diff (98.2 %id) | ||
| BG284261 | adenocarcinoma, cell line, Prostate | .a | 160 to 566 | 1 to 405 | AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 405/409 (99 %) | 5 diff (98.8 %id) | |
| BM551477 | astrocytoma grade IV, cell line, brain | .a | 160 to 963 | 1 to 811 | K196T R204A T205H L206S R207E ... | 811/1137 (71 %) | 28 diff (97.6 %id) | ||
| BM921175 | pooled brain, lung, testis | .a | 161 to 1163 | 3 to 1017 | V117I | 1015/1017 (99 %) | 27 diff (97.4 %id) | ||
| BU543304 | carcinoma, cell line, Prostate | .a | 161 to 856 | 1 to 697 | G212X V213G V214G K215E E216G ... | 697/944 (73 %) | 5 diff (99.5 %id) | ||
| CD704349 | normal nasopharynx | .a | 162 to 459 | 42 to 339 | 298/339 (87 %) | 9 diff (97.4 %id) | |||
| BU520998 | leiomyosarcoma, uterus | .a | 162 to 1026 | 1 to 881 | E184G K186E E187G P188A G189R ... | 881/882 (99 %) | 21 diff (97.7 %id) | ||
| CB961117 | Human Placenta, placenta | .a | 162 to 826 | 21 to 689 | 669/823 (81 %) | 17 diff (98.0 %id) | |||
| DA207947 | brain | .a | 163 to 724 | 2 to 563 | capped | 562/562 (100 %) | 0 diff (100 %id) | ||
| DA364883 | subthalamic nucleus | .a | 163 to 710 | 2 to 549 | capped | 548/548 (100 %) | 0 diff (100 %id) | ||
| BE256650 | eye, retinoblastoma | .a | 164 to 923 | 1 to 752 | E187G P188A T190H V191S A192G ... | 752/767 (98 %) | 19 diff (97.6 %id) | ||
| BF683833 | leiomyosarcoma cell line, uterus | .a | 164 to 877 | 1 to 717 | L18C S19L L20S R21G P22H ... | AAA | 717/717 (100 %) | 20 diff (97.3 %id) | |
| BG705600 | brain, hypothalamus | .a | 164 to 636 | 1 to 475 | 475/475 (100 %) | 7 diff (98.6 %id) | |||
| BG771897 | testis | .a | 164 to 1003 | 1 to 837 | V214G K215E E216R A217K | 837/837 (100 %) | 17 diff (98.0 %id) | ||
| BI517558 | pooled colon, kidney, stomach | .a | 164 to 954 | 1 to 787 | L8W A9R R10G R11Q L13S ... | 787/787 (100 %) | 6 diff (99.3 %id) | ||
| BI838148 | pooled pancreas and spleen | .a | 164 to 646 | 1 to 483 | 483/483 (100 %) | 0 diff (100 %id) | |||
| TI_45235938 | .a | 164 to 954 | 65 to 851 | L8W A9R R10G R11Q L13S ... | 787/851 (92 %) | 8 diff (99.1 %id) | |||
| TI_57163283 | .a | 164 to 646 | 32 to 514 | 483/514 (93 %) | 6 diff (98.9 %id) | ||||
| BF949047 | nervous_normal | .a | 166 to 523 | 24 to 380 | 357/403 (88 %) | 11 diff (97.3 %id) | |||
| DB475078 | hippocampus | .a | 166 to 667 | 1 to 502 | 502/502 (100 %) | 1 diff (99.9 %id) | |||
| CD299346 | Blood vessels - aorta, basilar and artery | .a | 166 to 517 | 1 to 356 | 356/846 (42 %) | 7 diff (99.2 %id) | |||
| TI_149312768 | .a | 166 to 873 | 799 to 92 | A3P A9P P54X F107X K109M ... | AAA | 708/976 (72 %) | 11 diff (98.9 %id) | ||
| BM978315 | lung | .a | 166 to 873 | 725 to 18 | A3P A9P P54X F107X K109M ... | AAA | 708/719 (98 %) | 11 diff (98.5 %id) | |
| BP196126 | adrenal gland | .a | 167 to 738 | 1 to 572 | 572/572 (100 %) | 0 diff (100 %id) | |||
| BF790991 | muscle (skeletal) | .a | 168 to 800 | 1 to 650 | 650/650 (100 %) | 29 diff (95.6 %id) | |||
| DB000525 | breast, tumor tissue | .a | 168 to 722 | 2 to 557 | capped | 556/556 (100 %) | 1 diff (99.9 %id) | ||
| BP201909 | amygdala | .a | 169 to 749 | 1 to 581 | 581/583 (99 %) | 3 diff (99.5 %id) | |||
| BP201926 | amygdala | .a | 169 to 750 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
| DB464554 | hippocampus | .a | 169 to 595 | 1 to 426 | 426/426 (100 %) | 14 diff (96.8 %id) | |||
| DB483449 | hippocampus | .a | 169 to 628 | 1 to 460 | 460/460 (100 %) | 3 diff (99.4 %id) | |||
| DB493659 | hypothalamus | .a | 169 to 690 | 1 to 522 | 522/522 (100 %) | 1 diff (99.9 %id) | |||
| DB499076 | hypothalamus | .a | 169 to 639 | 1 to 471 | 471/471 (100 %) | 1 diff (99.8 %id) | |||
| BM835344 | stomach | .a | 169 to 796 | 1 to 628 | 628/628 (100 %) | 0 diff (100 %id) | |||
| BP359676 | mammary gland | .a | 169 to 748 | 1 to 582 | 582/582 (100 %) | 2 diff (99.7 %id) | |||
| DA159267 | amygdala | .a | 170 to 729 | 2 to 562 | capped | 561/561 (100 %) | 1 diff (99.9 %id) | ||
| DA282785 | corpus callosum | .a | 170 to 728 | 2 to 560 | capped | 559/559 (100 %) | 0 diff (100 %id) | ||
| DA289687 | hippocampus | .a | 170 to 744 | 2 to 576 | capped | 575/575 (100 %) | 0 diff (100 %id) | ||
| AA448573 | .a | 170 to 631 | 11 to 471 | 461/471 (97 %) | 6 diff (98.8 %id) | ||||
| DA775647 | brain | .a | 170 to 743 | 2 to 575 | capped | 574/574 (100 %) | 1 diff (99.9 %id) | ||
| DA881417 | .a | 170 to 714 | 2 to 546 | capped | 545/545 (100 %) | 1 diff (99.9 %id) | |||
| BP347217 | brain | .a | 170 to 756 | 1 to 583 | 583/583 (100 %) | 4 diff (99.4 %id) | |||
| DA386455 | thalamus | .a | 173 to 756 | 2 to 585 | capped | 584/584 (100 %) | 0 diff (100 %id) | ||
| BQ068226 | brain | .a | 173 to 999 | 1 to 839 | V125A L210P V211G V213G V214G ... | 839/993 (84 %) | 31 diff (96.9 %id) | ||
| BE531090 | adenocarcinoma, Pancreas | .a | 174 to 880 | 1 to 711 | P126S E128R E129R I130N K131* | AAA | 711/711 (100 %) | 14 diff (98.1 %id) | |
| BE615284 | adenocarcinoma, Pancreas | .a | 174 to 873 | 1 to 699 | L82W A83Q D84T T85L E86R ... | 699/841 (83 %) | 5 diff (99.5 %id) | ||
| BE614754 | adenocarcinoma, Pancreas | .a | 174 to 873 | 1 to 696 | L82W A83Q D84T T85L E86R ... | AAA | 696/696 (100 %) | 7 diff (99.0 %id) | |
| BF237489 | leiomyosarcoma cell line, uterus | .a | 174 to 868 | 1 to 753 | L16W R21S P22A S23I P24S ... | 538/942 (57 %) | 69 diff (92.7 %id) | ||
| DB450440 | testis | .a | 175 to 640 | 1 to 466 | 466/466 (100 %) | 6 diff (98.8 %id) | |||
| BE888025 | leiomyosarcoma, uterus | .a | 175 to 942 | 1 to 772 | H202P G203W R204A T205H L206S ... | 772/882 (87 %) | 17 diff (98.1 %id) | ||
| BF973036 | leiomyosarcoma cell line, uterus | .a | 175 to 886 | 1 to 710 | L16W A17R L18C S19L L20S ... | 710/710 (100 %) | 3 diff (99.6 %id) | ||
| DA299115 | hippocampus | .a | 176 to 756 | 2 to 582 | capped | 581/581 (100 %) | 0 diff (100 %id) | ||
| AV661378 | corresponding non cancerous liver tissue | .a | 176 to 555 | 1 to 380 | Submitted on the opposite strand | 380/380 (100 %) | 1 diff (99.8 %id) | ||
| BQ955263 | epidermoid carcinoma, cell line, lung | .a | 176 to 1026 | 1 to 861 | V166C G167R A168S K169P F170S ... | 861/929 (92 %) | 26 diff (97.3 %id) | ||
| BE281433 | choriocarcinoma, placenta | .a | 177 to 620 | 1 to 444 | 444/446 (99 %) | 1 diff (99.8 %id) | |||
| BQ687995 | ductal carcinoma, cell line, Pancreas | .a | 177 to 878 | 1 to 704 | V213G V214G K215E E216G A217N | 704/881 (79 %) | 17 diff (98.1 %id) | ||
| TI_1948100792 | .a | 177 to 434 | 123 to 380 | fully sequenced, | 258/283 (91 %) | 6 diff (97.9 %id) | |||
| TI_1948100306 | .a | 178 to 539 | 124 to 485 | fully sequenced, | 362/390 (92 %) | 6 diff (98.5 %id) | |||
| TI_1948100459 | .a | 178 to 516 | 128 to 466 | fully sequenced, AAA | 339/365 (92 %) | 6 diff (98.4 %id) | |||
| TI_1948100630 | .a | 178 to 516 | 127 to 465 | fully sequenced, AAA | 339/366 (92 %) | 6 diff (98.4 %id) | |||
| CR621363 | Placenta Cot 25-normalized | .a | 179 to 1586 | 1 to 1408 | exact | 1408/1408 (100 %) | 0 diff (100 %id) | ||
| AL546362 | placenta, Placenta Cot 25-normalized | .a | 179 to 1004 | 1 to 826 | K109X | fully sequenced, | 826/826 (100 %) | 1 diff (99.9 %id) | |
| CV024418 | mixed | .a | 179 to 791 | 1 to 613 | 613/613 (100 %) | 0 diff (100 %id) | |||
| BG031537 | breast, mammary adenocarcinoma, cell line | .a | 179 to 854 | 1 to 680 | T156I H180T T181H P182R V183L ... | 680/985 (69 %) | 14 diff (98.6 %id) | ||
| BM045681 | carcinoma, cell line, Prostate | .a | 179 to 849 | 1 to 678 | K77Q K100N L101I Y102I G103R ... | 678/682 (99 %) | 22 diff (96.8 %id) | ||
| TI_57217746 | .a | 179 to 756 | 33 to 611 | 579/611 (94 %) | 9 diff (98.6 %id) | ||||
| AL601647 | .a | 180 to 676 | 1 to 497 | 497/497 (100 %) | 0 diff (100 %id) | ||||
| BE543768 | cervical carcinoma cell line, cervix | .a | 180 to 792 | 1 to 638 | 638/1051 (60 %) | 33 diff (96.9 %id) | |||
| BG332455 | large cell carcinoma, lung | .a | 180 to 883 | 1 to 706 | 706/940 (75 %) | 18 diff (98.1 %id) | |||
| CD672043 | eye, Iris | .a | 181 to 879 | 1 to 699 | 699/699 (100 %) | 0 diff (100 %id) | |||
| BG330104 | eye, retinoblastoma | .a | 181 to 845 | 1 to 667 | 667/1156 (57 %) | 8 diff (99.4 %id) | |||
| BG396570 | eye, retinoblastoma | .a | 181 to 754 | 1 to 573 | 573/573 (100 %) | 3 diff (99.5 %id) | |||
| BG479521 | choriocarcinoma, placenta | .a | 181 to 814 | 1 to 650 | 650/658 (98 %) | 28 diff (95.8 %id) | |||
| BG739863 | skin | .a | 181 to 996 | 1 to 816 | 816/817 (99 %) | 3 diff (99.7 %id) | |||
| BI753057 | brain | .a | 181 to 756 | 1 to 577 | 577/577 (100 %) | 2 diff (99.7 %id) | |||
| CB160588 | Liver | .a | 181 to 704 | 1 to 524 | 524/524 (100 %) | 0 diff (100 %id) | |||
| AF298592 | brain | .a | 182 to 835 | 1 to 654 | 654/654 (100 %) | 0 diff (100 %id) | |||
| R08733 | liver and spleen | .a | 182 to 495 | 1 to 317 | 317/391 (81 %) | 12 diff (97.0 %id) | |||
| R10417 | liver and spleen | .a | 182 to 495 | 1 to 315 | 315/421 (74 %) | 7 diff (98.4 %id) | |||
| BG284746 | adenocarcinoma, cell line, Prostate | .a | 182 to 954 | 1 to 775 | 777/775 (100 %) | 17 diff (97.9 %id) | |||
| W73318 | Pancreas, pancreatic islet | .a | 186 to 606 | 1 to 425 | 425/425 (100 %) | 3 diff (99.3 %id) | |||
| BQ310471 | breast | .a | 194 to 596 | 425 to 22 | 404/434 (93 %) | 3 diff (99.4 %id) | |||
| AA339599 | brain | .a | 195 to 507 | 1 to 314 | 314/314 (100 %) | 2 diff (99.4 %id) | |||
| AW967141 | .a | 195 to 763 | 1 to 569 | 569/571 (99 %) | 25 diff (95.7 %id) | ||||
| BM455574 | lymph, lymphoma, cell line | .a | 201 to 847 | 38 to 686 | 649/1061 (61 %) | 22 diff (98.0 %id) | |||
| BF033746 | adenocarcinoma, ovary | .a | 203 to 898 | 1 to 691 | 691/901 (76 %) | 24 diff (97.4 %id) | |||
| BM912840 | amelanotic melanoma, cell line, skin | .a | 204 to 1080 | 1 to 882 | 882/1052 (83 %) | 29 diff (97.3 %id) | |||
| CB145951 | Liver | .a | 204 to 736 | 1 to 533 | 533/533 (100 %) | 7 diff (98.7 %id) | |||
| CN293244 | embryonic stem cells, DMSO-treated H9 cellline | .a | 216 to 607 | 1 to 392 | 392/392 (100 %) | 0 diff (100 %id) | |||
| AA887226 | Kidney | .a | 226 to 872 | 649 to 1 | 649/680 (95 %) | 20 diff (97.1 %id) | |||
| CU446738 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 2 diff (99.2 %id) | ||
| CU448793 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 1 diff (99.6 %id) | ||
| CU450369 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 1 diff (99.6 %id) | ||
| CU450508 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 2 diff (99.2 %id) | ||
| CU451058 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 1 diff (99.6 %id) | ||
| CU453012 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 1 diff (99.6 %id) | ||
| CU453836 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 1 diff (99.6 %id) | ||
| CU454924 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 1 diff (99.6 %id) | ||
| CU456866 | epidermis | .a | 250 to 445 | 222 to 27 | Submitted on the opposite strand | 196/235 (83 %) | 1 diff (99.6 %id) | ||
| CD369788 | Alveolar Macrophage, lung | .a | 251 to 880 | 649 to 19 | AAA | 631/631 (100 %) | 2 diff (99.7 %id) | ||
| BE842941 | stomach | .a | 264 to 476 | 211 to 2 | 210/211 (99 %) | 0 diff (100 %id) | |||
| N24290 | melanocyte | .a | 275 to 648 | 1 to 380 | 380/387 (98 %) | 8 diff (98.0 %id) | |||
| N57392 | placenta | .a | 279 to 452 | 1 to 177 | 177/181 (97 %) | 6 diff (96.7 %id) | |||
| BQ364260 | stomach | .a | 309 to 925 | 619 to 2 | 618/619 (99 %) | 6 diff (99.1 %id) | |||
| BG180930 | adenocarcinoma, cell line, Prostate | .a | 360 to 968 | 1 to 609 | 609/609 (100 %) | 0 diff (100 %id) | |||
| AA037118 | senescent fibroblast | .a | 375 to 803 | 12 to 443 | 432/448 (96 %) | 12 diff (97.4 %id) | |||
| CD686735 | normal nasopharynx | .a | 379 to 843 | 16 to 480 | 468/480 (97 %) | 7 diff (98.6 %id) | |||
| TI_1948100793 | .a | 381 to 831 | 579 to 129 | fully sequenced, | 451/478 (94 %) | 0 diff (100 %id) | |||
| BQ423316 | melanotic melanoma, skin | .a | 419 to 1041 | 23 to 658 | 636/815 (78 %) | 37 diff (95.5 %id) | |||
| BU942140 | mixed (pool of 40 RNAs) | .a | 432 to 1167 | 1 to 746 | 746/757 (98 %) | 17 diff (97.8 %id) | |||
| BG290183 | bladder, transitional cell papilloma, cell line | .a | 437 to 1169 | 1 to 729 | 729/729 (100 %) | 9 diff (98.8 %id) | |||
| AA926786 | pooled germ cell tumors | .a | 454 to 873 | 422 to 1 | 422/424 (99 %) | 7 diff (98.4 %id) | |||
| TI_1948100460 | .a | 455 to 831 | 506 to 129 | fully sequenced, | 378/506 (74 %) | 0 diff (100 %id) | |||
| TI_1948100631 | .a | 455 to 831 | 505 to 129 | fully sequenced, | 377/404 (93 %) | 0 diff (100 %id) | |||
| EC562910 | Prostate | .a | 459 to 566 | 108 to 2 | AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 107/112 (95 %) | 1 diff (99.2 %id) | |
| TI_154103242 | .a | 480 to 1320 | 909 to 86 | AAA | 824/951 (86 %) | 21 diff (97.8 %id) | |||
| AA937158 | 2 pooled tumors (clear cell type), Kidney | .a | 485 to 873 | 389 to 1 | 389/395 (98 %) | 2 diff (99.5 %id) | |||
| TI_1948100307 | .a | 509 to 837 | 446 to 118 | fully sequenced, | 329/446 (73 %) | 5 diff (98.9 %id) | |||
| AI096903 | brain, glioblastoma (pooled) | .a | 518 to 1165 | 665 to 17 | AAA | 649/649 (100 %) | 6 diff (99.1 %id) | ||
| N28384 | melanocyte | .a | 522 to 889 | 1 to 370 | 370/370 (100 %) | 2 diff (99.5 %id) | |||
| CA308439 | Alveolar Macrophage, lung | .a | 524 to 1164 | 661 to 19 | AAA | 643/643 (100 %) | 2 diff (99.7 %id) | ||
| CB116566 | Liver | .a | 548 to 830 | 1 to 283 | 283/283 (100 %) | 2 diff (99.3 %id) | |||
| BF241114 | bone marrow, from acute myelogenous leukemia | .a | 552 to 1163 | 1 to 606 | 606/664 (91 %) | 17 diff (97.5 %id) | |||
| BM689230 | eye, eye anterior segment | .a | 568 to 853 | 1 to 286 | fully sequenced, | 286/286 (100 %) | 5 diff (98.3 %id) | ||
| BG928406 | cartilage | .a | 573 to 1173 | 71 to 672 | 602/610 (98 %) | 8 diff (98.7 %id) | |||
| BF915325 | uterus_tumor | .a | 578 to 738 | 26 to 187 | 162/187 (86 %) | 6 diff (96.8 %id) | |||
| AA989480 | 2 pooled tumors (clear cell type), Kidney | .a | 603 to 875 | 280 to 8 | 273/280 (97 %) | 0 diff (100 %id) | |||
| BI964173 | Islets of Langerhans, Pancreas | .a | 604 to 880 | 1 to 277 | AAA | 277/277 (100 %) | 0 diff (100 %id) | ||
| CK724917 | Chondrosarcoma, Left Pubic Bone | .a | 611 to 1320 | 723 to 16 | AAA | 708/708 (100 %) | 2 diff (99.8 %id) | ||
| T51904 | ovary | .a | 631 to 873 | 1 to 245 | fully sequenced, | 245/245 (100 %) | 3 diff (98.8 %id) | ||
| AW205108 | .a | 631 to 873 | 260 to 18 | AAA | 243/253 (96 %) | 0 diff (100 %id) | |||
| DB056584 | testis | .a | 632 to 1155 | 2 to 526 | capped | 525/525 (100 %) | 2 diff (99.7 %id) | ||
| BM689351 | eye, optic nerve | .a | 633 to 1249 | 1 to 617 | fully sequenced, | 617/617 (100 %) | 5 diff (99.2 %id) | ||
| BJ996183 | hepatoblastoma | .a | 635 to 1126 | 492 to 1 | 492/492 (100 %) | 0 diff (100 %id) | |||
| BI826823 | brain, medulla | .a | 639 to 1404 | 1 to 765 | 765/765 (100 %) | 5 diff (99.4 %id) | |||
| TI_57173115 | .a | 639 to 1404 | 29 to 793 | 765/793 (96 %) | 7 diff (99.2 %id) | ||||
| AA894526 | pooled germ cell tumors | .a | 665 to 882 | 219 to 2 | 218/219 (99 %) | 0 diff (100 %id) | |||
| R10663 | liver and spleen | .a | 668 to 1046 | 1 to 390 | 390/395 (98 %) | 17 diff (95.7 %id) | |||
| R83543 | liver and spleen | .a | 679 to 1085 | 1 to 411 | 411/489 (84 %) | 6 diff (98.8 %id) | |||
| AI096604 | brain, glioblastoma (pooled) | .a | 692 to 1167 | 479 to 4 | 476/479 (99 %) | 0 diff (100 %id) | |||
| FN131995 | breast carcinoma | .a | 703 to 806 | 99 to 1 | Submitted on the opposite strand | 99/99 (100 %) | 5 diff (95.0 %id) | ||
| BG026520 | Bone, osteosarcoma, cell line | .a | 706 to 1442 | 1 to 727 | 727/913 (79 %) | 13 diff (98.6 %id) | |||
| AI056479 | brain, glioblastoma (pooled) | .a | 707 to 1167 | 464 to 4 | 461/464 (99 %) | 0 diff (100 %id) | |||
| R95123 | liver and spleen | .a | 708 to 1135 | 1 to 435 | 435/437 (99 %) | 11 diff (97.5 %id) | |||
| T51856 | ovary | .a | 715 to 873 | 159 to 1 | fully sequenced, | 159/159 (100 %) | 0 diff (100 %id) | ||
| H52321 | ovarian tumor, ovary | .a | 730 to 873 | 1 to 144 | AAA | 144/144 (100 %) | 1 diff (99.4 %id) | ||
| AV733966 | pheochromocytoma | .a | 734 to 1164 | 1 to 431 | AAA | 431/431 (100 %) | 0 diff (100 %id) | ||
| BG168835 | hypernephroma, cell line, Kidney | .a | 755 to 1167 | 1 to 414 | 414/646 (64 %) | 3 diff (99.6 %id) | |||
| FN071240 | breast carcinoma | .a | 762 to 818 | 57 to 1 | Submitted on the opposite strand | 57/57 (100 %) | 0 diff (100 %id) | ||
| CD559208 | pooled | .a | 769 to 1481 | 1 to 714 | 714/715 (99 %) | 2 diff (99.8 %id) | |||
| FN133003 | breast carcinoma | .a | 783 to 891 | 1 to 108 | 108/108 (100 %) | 1 diff (99.1 %id) | |||
| TI_149314217 | .a | 789 to 1639 | 925 to 89 | AAA | 837/957 (87 %) | 18 diff (98.2 %id) | |||
| BE140704 | head_neck | .a | 802 to 1059 | 256 to 1 | Submitted on the opposite strand | 256/277 (92 %) | 3 diff (99.0 %id) | ||
| BQ011831 | placenta | .a | 805 to 1165 | 379 to 19 | AAA | 361/361 (100 %) | 0 diff (100 %id) | ||
| BP392531 | pancreatic islet | .a | 821 to 1320 | 1 to 500 | Submitted on the opposite strand | 500/500 (100 %) | 2 diff (99.6 %id) | ||
| BM662604 | eye, eye anterior segment | .a | 823 to 1165 | 361 to 19 | fully sequenced, AAA | 343/343 (100 %) | 0 diff (100 %id) | ||
| CD369744 | Alveolar Macrophage, lung | .a | 829 to 1639 | 823 to 19 | AAA | 805/805 (100 %) | 6 diff (99.3 %id) | ||
| AI795895 | brain, frontal cortex | .a | 835 to 964 | 1 to 130 | 130/130 (100 %) | 0 diff (100 %id) | |||
| AW801868 | uterus | .a | 835 to 1131 | 301 to 4 | 298/301 (99 %) | 0 diff (100 %id) | |||
| FN056575 | breast carcinoma | .a | 839 to 921 | 1 to 83 | 83/84 (98 %) | 1 diff (98.9 %id) | |||
| TI_159697561 | .a | 840 to 1639 | 859 to 61 | AAA | 799/964 (82 %) | 19 diff (98.1 %id) | |||
| DA704688 | .a | 841 to 1315 | 2 to 476 | capped | 475/475 (100 %) | 0 diff (100 %id) | |||
| BG941859 | blood | .a | 843 to 1165 | 358 to 36 | AAA | 323/323 (100 %) | 4 diff (98.8 %id) | ||
| TI_149308085 | .a | 845 to 1637 | 63 to 855 | Submitted on the opposite strand | 793/1055 (75 %) | 8 diff (99.3 %id) | |||
| CB851271 | lung, Primary Lung Epithelial Cells | .a | 845 to 1513 | 9 to 677 | Submitted on the opposite strand | 669/677 (98 %) | 6 diff (99.2 %id) | ||
| AF070525 | brain | .a | 874 to 2797 | 1 to 1924 | tiling clone, AAA | 1924/1924 (100 %) | 3 diff (99.9 %id) | ||
| AA410658 | ovarian tumor, ovary | .a | 884 to 1159 | 1 to 272 | 272/272 (100 %) | 5 diff (98.2 %id) | |||
| BM711352 | eye, fetal eyes | .a | 885 to 1321 | 1 to 437 | fully sequenced, | 437/437 (100 %) | 0 diff (100 %id) | ||
| AL578153 | placenta | .a | 888 to 1607 | 715 to 1 | fully sequenced, | 715/715 (100 %) | 68 diff (90.5 %id) | ||
| N29453 | placenta | .a | 891 to 1167 | 282 to 6 | 277/282 (98 %) | 0 diff (100 %id) | |||
| H21017 | brain | .a | 896 to 1291 | 1 to 401 | fully sequenced, | 401/401 (100 %) | 8 diff (98.1 %id) | ||
| BP430931 | .a | 896 to 1160 | 265 to 1 | 265/265 (100 %) | 0 diff (100 %id) | ||||
| TI_149286655 | .a | 897 to 1639 | 832 to 95 | AAA | 738/1119 (65 %) | 10 diff (99.2 %id) | |||
| TI_149295485 | .a | 897 to 1639 | 818 to 84 | AAA | 735/906 (81 %) | 9 diff (99.1 %id) | |||
| BX427291 | fetal liver, Liver | .a | 901 to 1611 | 716 to 1 | 716/974 (73 %) | 12 diff (98.8 %id) | |||
| BG941013 | blood | .a | 915 to 1165 | 282 to 32 | AAA | 251/251 (100 %) | 4 diff (98.5 %id) | ||
| BG252148 | adenocarcinoma, cell line, Liver | .a | 939 to 1164 | 1 to 227 | AAA | 227/227 (100 %) | 2 diff (99.2 %id) | ||
| CB305906 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .a | 947 to 1639 | 711 to 19 | AAA | 693/693 (100 %) | 0 diff (100 %id) | ||
| BF888720 | testis_normal | .a | 948 to 1505 | 553 to 1 | Submitted on the opposite strand | 553/561 (98 %) | 16 diff (97.2 %id) | ||
| TI_149285734 | .a | 948 to 1652 | 791 to 86 | AAA | 706/707 (99 %) | 6 diff (99.2 %id) | |||
| AA872216 | 2 pooled tumors (clear cell type), Kidney | .a | 949 to 1165 | 230 to 16 | AAA | 215/215 (100 %) | 2 diff (99.1 %id) | ||
| BQ772888 | Chondrosarcoma Cell line | .a | 950 to 1639 | 706 to 19 | AAA | 688/688 (100 %) | 2 diff (99.8 %id) | ||
| BF888314 | testis_normal | .a | 955 to 1501 | 559 to 14 | Submitted on the opposite strand | 546/559 (97 %) | 0 diff (100 %id) | ||
| AW003014 | pooled germ cell tumors | .a | 957 to 1320 | 365 to 1 | 365/365 (100 %) | 4 diff (99.0 %id) | |||
| BF888719 | testis_normal | .a | 959 to 1368 | 12 to 420 | 409/420 (97 %) | 6 diff (98.6 %id) | |||
| BF888312 | testis_normal | .a | 962 to 1491 | 1 to 528 | 528/528 (100 %) | 12 diff (97.8 %id) | |||
| AW890788 | nervous_tumor | .a | 974 to 1186 | 14 to 226 | 213/227 (93 %) | 8 diff (96.5 %id) | |||
| AL571727 | placenta, Placenta Cot 25-normalized | .a | 974 to 1586 | 617 to 1 | fully sequenced, | 617/617 (100 %) | 17 diff (97.3 %id) | ||
| TI_57148352 | .a | 1002 to 1639 | 69 to 710 | 642/926 (69 %) | 5 diff (99.5 %id) | ||||
| BM972190 | lung | .a | 1002 to 1639 | 656 to 19 | AAA | 638/638 (100 %) | 1 diff (99.9 %id) | ||
| BI759673 | pooled colon, kidney, stomach | .a | 1003 to 1639 | 1 to 641 | 641/684 (93 %) | 5 diff (99.3 %id) | |||
| BU683681 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .a | 1003 to 1639 | 655 to 19 | AAA | 637/637 (100 %) | 0 diff (100 %id) | ||
| AA357267 | .a | 1006 to 1419 | 1 to 413 | 413/413 (100 %) | 5 diff (98.8 %id) | ||||
| AA357271 | .a | 1006 to 1280 | 1 to 275 | 275/275 (100 %) | 1 diff (99.7 %id) | ||||
| AW371651 | breast | .a | 1008 to 1531 | 525 to 4 | 522/530 (98 %) | 0 diff (100 %id) | |||
| N99585. matches multiple genes | multiple sclerosis lesions | .a | 1009 to 1484 | 1 to 488 | also hits gene TDG | 488/488 (100 %) | 18 diff (96.4 %id) | ||
| BM971620 | lung | .a | 1011 to 1652 | 656 to 14 | AAA | 643/643 (100 %) | 3 diff (99.6 %id) | ||
| AL542570 | placenta | .a | 1015 to 1594 | 570 to 1 | fully sequenced, | 570/570 (100 %) | 10 diff (98.3 %id) | ||
| BM991960 | Bone, Subchondral Bone | .a | 1018 to 1639 | 641 to 19 | AAA | 623/623 (100 %) | 1 diff (99.9 %id) | ||
| AI860322 | lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) | .a | 1020 to 1514 | 1 to 495 | Submitted on the opposite strand | 495/495 (100 %) | 0 diff (100 %id) | ||
| CD672042 | eye, Iris | .a | 1062 to 1320 | 280 to 22 | AAA | 259/259 (100 %) | 0 diff (100 %id) | ||
| EC527332 | Prostate | .a | 1074 to 1165 | 93 to 2 | 92/93 (98 %) | 0 diff (100 %id) | |||
| AA536008 | colon | .a | 1103 to 1640 | 537 to 3 | 535/556 (96 %) | 0 diff (100 %id) | |||
| H61884 | liver and spleen | .a | 1104 to 1473 | 1 to 371 | 371/371 (100 %) | 3 diff (99.2 %id) | |||
| AA536009 | colon | .a | 1122 to 1640 | 515 to 3 | 513/548 (93 %) | 0 diff (100 %id) | |||
| DB570179 | hypothalamus | .a | 1141 to 1641 | 1 to 501 | Submitted on the opposite strand | 501/501 (100 %) | 1 diff (99.9 %id) | ||
| CN481281 | eye | .a | 1146 to 1390 | 1 to 245 | 245/245 (100 %) | 4 diff (98.4 %id) | |||
| DB552366 | hippocampus | .a | 1152 to 1613 | 1 to 463 | Submitted on the opposite strand | 463/463 (100 %) | 1 diff (99.8 %id) | ||
| AA449720 | .a | 1172 to 1637 | 477 to 13 | AAA | 465/465 (100 %) | 1 diff (99.8 %id) | |||
| AI564070 | anaplastic oligodendroglioma, brain | .a | 1177 to 1640 | 465 to 2 | 464/465 (99 %) | 0 diff (100 %id) | |||
| AW772467 | Kidney | .a | 1177 to 1630 | 461 to 8 | 454/461 (98 %) | 0 diff (100 %id) | |||
| BQ448478 | Knee, Osteoarthritic Cartilage | .a | 1180 to 1631 | 470 to 19 | AAA | 452/452 (100 %) | 0 diff (100 %id) | ||
| N70779 | lung | .a | 1181 to 1636 | 461 to 1 | 461/463 (99 %) | 11 diff (97.7 %id) | |||
| DB549728 | hippocampus | .a | 1182 to 1652 | 1 to 471 | Submitted on the opposite strand | 471/471 (100 %) | 2 diff (99.6 %id) | ||
| DB548691 | hippocampus | .a | 1185 to 1641 | 1 to 457 | Submitted on the opposite strand | 457/457 (100 %) | 0 diff (100 %id) | ||
| DB543907 | hippocampus | .a | 1194 to 1645 | 1 to 452 | Submitted on the opposite strand | 452/454 (99 %) | 2 diff (99.6 %id) | ||
| DB525618 | testis | .a | 1196 to 1637 | 1 to 442 | Submitted on the opposite strand | 442/442 (100 %) | 2 diff (99.6 %id) | ||
| AI340183 | 2 pooled tumors (clear cell type), Kidney | .a | 1197 to 1639 | 456 to 14 | AAA | 443/443 (100 %) | 0 diff (100 %id) | ||
| H98722 | melanocyte | .a | 1201 to 1640 | 444 to 1 | 444/445 (99 %) | 6 diff (98.7 %id) | |||
| AI620166 | Prostate | .a | 1216 to 1637 | 425 to 4 | 422/425 (99 %) | 0 diff (100 %id) | |||
| AI307646 | 2 pooled tumors (clear cell type), Kidney | .a | 1217 to 1640 | 431 to 8 | 424/431 (98 %) | 0 diff (100 %id) | |||
| AI308091 | 2 pooled tumors (clear cell type), Kidney | .a | 1219 to 1640 | 428 to 7 | 422/428 (98 %) | 0 diff (100 %id) | |||
| BM673008 | eye, optic nerve | .a | 1219 to 1639 | 439 to 19 | fully sequenced, AAA | 421/421 (100 %) | 1 diff (99.8 %id) | ||
| N92650 | multiple sclerosis lesions | .a | 1220 to 1637 | 420 to 1 | 420/420 (100 %) | 2 diff (99.6 %id) | |||
| AI122641 | heart | .a | 1222 to 1640 | 423 to 5 | 419/423 (99 %) | 0 diff (100 %id) | |||
| N22117 | cochlea, ear | .a | 1227 to 1640 | 422 to 2 | 421/422 (99 %) | 0 diff (100 %id) | |||
| N20031 | melanocyte | .a | 1231 to 1632 | 409 to 8 | 402/409 (98 %) | 0 diff (100 %id) | |||
| AI373712 | uterus | .a | 1233 to 1639 | 425 to 20 | AAA | 406/406 (100 %) | 2 diff (99.6 %id) | ||
| BF430923 | Kidney | .a | 1239 to 1639 | 401 to 1 | 401/401 (100 %) | 0 diff (100 %id) | |||
| DB564724 | hypothalamus | .a | 1242 to 1641 | 17 to 419 | Submitted on the opposite strand | 403/419 (96 %) | 6 diff (98.6 %id) | ||
| Z42640 | brain, total brain | .a | 1248 to 1530 | 1 to 282 | 282/282 (100 %) | 1 diff (99.7 %id) | |||
| AA515107 | colon | .a | 1248 to 1640 | 395 to 3 | 393/395 (99 %) | 0 diff (100 %id) | |||
| H20974 | brain | .a | 1261 to 1636 | 388 to 3 | fully sequenced, | 386/388 (99 %) | 13 diff (96.7 %id) | ||
| R95124 | liver and spleen | .a | 1272 to 1640 | 379 to 3 | 377/389 (96 %) | 0 diff (100 %id) | |||
| AI318370 | adenocarcinoma, colon | .a | 1277 to 1639 | 376 to 14 | AAA | 363/363 (100 %) | 0 diff (100 %id) | ||
| AI140924 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .a | 1288 to 1614 | 327 to 1 | 327/327 (100 %) | 0 diff (100 %id) | |||
| BM665927 | eye, fetal eyes | .a | 1291 to 1639 | 368 to 19 | fully sequenced, AAA | 350/350 (100 %) | 0 diff (100 %id) | ||
| R08639 | liver and spleen | .a | 1296 to 1633 | 350 to 8 | 343/351 (97 %) | 0 diff (100 %id) | |||
| AI375045 | .a | 1305 to 1636 | 350 to 17 | 334/360 (92 %) | 0 diff (100 %id) | ||||
| C21567 | .a | 1308 to 1638 | 1 to 339 | 339/343 (98 %) | 11 diff (96.8 %id) | ||||
| BE326991 | Kidney | .a | 1310 to 1640 | 334 to 4 | 331/334 (99 %) | 0 diff (100 %id) | |||
| FN137672 | breast carcinoma | .a | 1311 to 1414 | 101 to 1 | Submitted on the opposite strand | 101/101 (100 %) | 3 diff (97.1 %id) | ||
| R21369 | whole brain | .a | 1311 to 1694 | 1 to 389 | 389/489 (79 %) | 6 diff (98.8 %id) | |||
| R35405 | whole brain | .a | 1312 to 1788 | 1 to 483 | 483/485 (99 %) | 12 diff (97.6 %id) | |||
| AI492768 | lymph node, lymphoma, follicular mixed small and largecell | .a | 1321 to 1639 | 319 to 1 | 319/319 (100 %) | 0 diff (100 %id) | |||
| AW196986 | 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney | .a | 1321 to 1640 | 320 to 1 | 320/320 (100 %) | 1 diff (99.7 %id) | |||
| AW196300 | serous papillary carcinoma, high grade, 2pooled tumors, uterus | .a | 1321 to 1632 | 315 to 4 | 312/315 (99 %) | 0 diff (100 %id) | |||
| AW572098 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .a | 1321 to 1639 | 331 to 13 | AAA | 319/319 (100 %) | 1 diff (99.7 %id) | ||
| AI866375 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .a | 1340 to 1640 | 303 to 2 | 302/305 (99 %) | 0 diff (100 %id) | |||
| AW004765 | colon | .a | 1354 to 1640 | 292 to 6 | 287/292 (98 %) | 0 diff (100 %id) | |||
| AA037156 | senescent fibroblast | .a | 1359 to 1647 | 291 to 1 | 291/291 (100 %) | 2 diff (99.4 %id) | |||
| AW004677 | colon | .a | 1361 to 1614 | 1 to 254 | Submitted on the opposite strand | 254/254 (100 %) | 0 diff (100 %id) | ||
| BG941768 | blood | .a | 1376 to 1651 | 310 to 35 | 276/310 (89 %) | 0 diff (100 %id) | |||
| BU588782 | mixed (pool of 40 RNAs) | .a | 1396 to 1650 | 1 to 255 | 255/292 (87 %) | 2 diff (99.4 %id) | |||
| AI284063 | colon, moderately-differentiated adenocarcinoma | .a | 1400 to 1639 | 258 to 19 | AAA | 240/240 (100 %) | 0 diff (100 %id) | ||
| DB323722 | .a | 1425 to 1968 | 546 to 1 | 546/546 (100 %) | 3 diff (99.5 %id) | ||||
| AA812528 | .a | 1429 to 1637 | 223 to 15 | AAA | 209/209 (100 %) | 1 diff (99.6 %id) | |||
| DB527849 | testis | .a | 1433 to 1641 | 1 to 209 | Submitted on the opposite strand | 209/209 (100 %) | 2 diff (99.1 %id) | ||
| AW269471 | lung, two pooled squamous cell carcinomas | .a | 1434 to 1640 | 210 to 4 | 207/210 (98 %) | 0 diff (100 %id) | |||
| FN049646 | breast carcinoma | .a | 1445 to 1556 | 1 to 112 | 112/112 (100 %) | 1 diff (99.2 %id) | |||
| AW631394 | 2 pooled high-grade transitional celltumors, genitourinary tract | .a | 1451 to 1642 | 1 to 190 | 190/232 (81 %) | 5 diff (97.9 %id) | |||
| AA251912 | germinal center B cell | .a | 1483 to 1640 | 166 to 9 | 158/166 (95 %) | 0 diff (100 %id) | |||
| BQ028995 | Bone, Subchondral Bone | .a | 1564 to 1917 | 12 to 365 | Submitted on the opposite strand | 354/365 (96 %) | 6 diff (98.4 %id) | ||
| AA357266 | .a | 1592 to 1976 | 387 to 3 | 385/387 (99 %) | 0 diff (100 %id) | ||||
| AA357270 | .a | 1637 to 1976 | 342 to 3 | 340/342 (99 %) | 0 diff (100 %id) | ||||
| BI258415 | cervical carcinoma cell line, cervix | .a | 1650 to 2348 | 1 to 700 | 700/700 (100 %) | 3 diff (99.6 %id) | |||
| BG110504 | Bone, osteosarcoma, cell line | .a | 1736 to 2536 | 1 to 796 | tiling clone, | 796/892 (89 %) | 35 diff (96.1 %id) | ||
| FN101918 | breast carcinoma | .a | 1769 to 1817 | 53 to 5 | Submitted on the opposite strand | 49/53 (92 %) | 0 diff (100 %id) | ||
| H55907 | liver and spleen | .a | 1899 to 2298 | 400 to 1 | tiling clone, | 400/400 (100 %) | 4 diff (99.0 %id) | ||
| BM929372 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 2116 to 2785 | 1 to 670 | fully sequenced, AAA | 670/670 (100 %) | 3 diff (99.6 %id) | ||
| BQ575584 | Chondrosarcoma Grade II, Left Pelvis | .a | 2119 to 2797 | 697 to 19 | AAA | 679/679 (100 %) | 2 diff (99.8 %id) | ||
| W30737 | senescent fibroblast | .a | 2128 to 2468 | 1 to 347 | fully sequenced, | 347/347 (100 %) | 12 diff (96.6 %id) | ||
| CA421481 | Chondrosarcoma Grade II, Left Pelvis | .a | 2155 to 2797 | 661 to 19 | AAA | 643/643 (100 %) | 2 diff (99.7 %id) | ||
| AW451321 | .a | 2194 to 2797 | 620 to 18 | AAA | 603/603 (100 %) | 3 diff (99.6 %id) | |||
| N50629 | multiple sclerosis lesions | .a | 2322 to 2797 | 478 to 1 | 478/478 (100 %) | 3 diff (99.4 %id) | |||
| AI399729 | Prostate | .a | 2326 to 2799 | 476 to 3 | 474/476 (99 %) | 0 diff (100 %id) | |||
| DB530864 | hippocampus | .a | 2348 to 2785 | 1 to 438 | Submitted on the opposite strand | 438/438 (100 %) | 4 diff (99.1 %id) | ||
| AW572386 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .a | 2396 to 2799 | 405 to 2 | tiling clone, | 404/405 (99 %) | 0 diff (100 %id) | ||
| AW864014 | stomach_normal | .a | 2400 to 2766 | 1 to 373 | 373/373 (100 %) | 14 diff (96.3 %id) | |||
| AA865393 | Kidney, kidney tumor | .a | 2405 to 2755 | 351 to 1 | 351/351 (100 %) | 1 diff (99.8 %id) | |||
| AW864034 | stomach_normal | .a | 2422 to 2802 | 1 to 381 | 381/395 (96 %) | 8 diff (98.0 %id) | |||
| N94459 | senescent fibroblast | .a | 2438 to 2796 | 363 to 1 | fully sequenced, | 363/363 (100 %) | 7 diff (98.1 %id) | ||
| AW613984 | pooled germ cell tumors | .a | 2443 to 2788 | 346 to 1 | 346/346 (100 %) | 1 diff (99.8 %id) | |||
| AI203151 | pooled germ cell tumors | .a | 2444 to 2788 | 345 to 1 | 345/345 (100 %) | 1 diff (99.8 %id) | |||
| AI961187 | pooled germ cell tumors | .a | 2444 to 2788 | 345 to 1 | 345/345 (100 %) | 1 diff (99.8 %id) | |||
| AI969339 | pooled germ cell tumors | .a | 2444 to 2785 | 352 to 11 | AAA | 342/342 (100 %) | 5 diff (98.6 %id) | ||
| BM683333 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 2463 to 2784 | 341 to 20 | fully sequenced, AAA | 322/322 (100 %) | 1 diff (99.7 %id) | ||
| BX117363 | whole brain | .a | 2550 to 3045 | 510 to 15 | tiling clone, AAA | 496/496 (100 %) | 0 diff (100 %id) | ||
| R49202 | whole brain | .a | 2615 to 3046 | 446 to 8 | tiling clone, | 439/446 (98 %) | 0 diff (100 %id) | ||
| BU753681 | placenta | .a | 2667 to 3045 | 396 to 18 | AAA | 379/379 (100 %) | 0 diff (100 %id) | ||
| F02140 | brain, total brain | .a | 2805 to 3045 | 241 to 1 | 241/241 (100 %) | 0 diff (100 %id) | |||
| AL050191 | uterus | .a | 2817 to 3045 | 1 to 229 | available from DKFZ, AAA | 229/229 (100 %) | 0 diff (100 %id) | ||
| R46467 | whole brain | .a | 2941 to 3046 | 114 to 9 | 106/114 (92 %) | 0 diff (100 %id) | |||
| DA607984 | .b | 1 to 617 | 2 to 618 | E52G | tiling clone, capped | 617/617 (100 %) | 1 diff (99.9 %id) | ||
| BQ890878 | sciatic nerve | .c | 1 to 729 | 1 to 741 | V140G E141* | tiling clone, | 741/947 (78 %) | 26 diff (97.3 %id) | |
| DB460176 | testis | .d | 1 to 426 | 1 to 426 | E78Q L134S E135D | tiling clone, | 426/426 (100 %) | 6 diff (98.6 %id) | |
| BP308084 | brain | .e | 1 to 575 | 6 to 581 | exact | 581/581 (100 %) | 1 diff (99.9 %id) | ||
| AK098475 | stomach mucosa | .e | 1 to 2194 | 2 to 2195 | exact | tiling clone, available from FLJ, | 2195/2195 (100 %) | 2 diff (100.0 %id) | |
| DA058553 | cerebellum | .e | 23 to 491 | 2 to 472 | exact | capped | 471/471 (100 %) | 1 diff (99.8 %id) | |
| BG012947 | placenta_normal | .f-u | 1 to 642 | 1 to 642 | Q19X C68X | tiling clone, | 642/642 (100 %) | 12 diff (98.2 %id) | |
| AA345183 | gall bladder | Gene GRPEL1, variant not shown | Suspected internal deletion, suspected internal deletion, this clone was ignored | ||||||
| AK301695 | esophagus, tumor tissue | Gene GRPEL1, variant not shown | This clone was ignored | ||||||
| CD694727 | normal nasopharynx | Gene GRPEL1, variant not shown | This clone was ignored | ||||||
| BJ996979 | hepatoblastoma | Gene GRPEL1, variant not shown | This clone was ignored | ||||||
| BJ996980 | hepatoblastoma | Gene GRPEL1, variant not shown | This clone was ignored | ||||||
| CB049028 | Prostate | Gene GRPEL1, variant not shown | AAA | This clone was ignored | |||||
| CB049029 | Prostate | Gene GRPEL1, variant not shown | This clone was ignored | ||||||
| BM754879 | stomach | Gene GRPEL1, variant not shown | Suspected internal deletion, this clone was ignored | ||||||
| DC394534 | esophageal, tumor tissue | Gene GRPEL1, variant not shown | This clone was ignored |
| ? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d, .e, .f-u | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes C |