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Gene GPTTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
85 supporting clones for gene GPT back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC018207 Brain, anaplastic oligodendroglioma with1p/19q loss .a 1 to 1822 1 to 1822 exact tiling clone, available from MGC, AAA   1822/1822
(100 %)
0 diff
(100 %id)
BF529332 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2 to 787 1 to 788   AAA   788/1292
(60 %)
26 diff
(98.0 %id)
BP323708 Pancreas .a 150 to 729 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BT006992   .a 158 to 1646 1 to 1489       1489/1491
(99 %)
1 diff
(100.0 %id)
D10355 Liver .a 167 to 1815 1 to 1649       1649/1653
(99 %)
7 diff
(99.6 %id)
AW842183 colon_normal .a 550 to 671 13 to 141       129/141
(91 %)
8 diff
(94.4 %id)
CD620211   .a 699 to 958 264 to 6       259/264
(98 %)
1 diff
(99.7 %id)
CD620212   .a 707 to 958 1 to 252       252/262
(96 %)
5 diff
(98.1 %id)
BG698409 skin .a 927 to 1653 1 to 726       726/726
(100 %)
6 diff
(99.2 %id)
AW242645 Kidney .a 1118 to 1814 700 to 1       700/748
(93 %)
25 diff
(96.7 %id)
BE267022 lung, small cell carcinoma .a 1118 to 1820 32 to 738       707/780
(90 %)
36 diff
(95.4 %id)
AW001265 colon, colonic mucosa from 3 patients with Crohn'sdisease .a 1275 to 1760 1 to 486     Submitted on the opposite strand 486/486
(100 %)
0 diff
(100 %id)
CR739607   .a 1346 to 1813 482 to 16   AAA   467/467
(100 %)
1 diff
(99.8 %id)
AI271988 Kidney .a 1373 to 1815 448 to 7       442/448
(98 %)
5 diff
(98.9 %id)
AI520825 adenocarcinoma, Pancreas .a 1375 to 1814 457 to 17   AAA   441/441
(100 %)
12 diff
(97.3 %id)
AA862636 Kidney .a 1376 to 1814 447 to 12   AAA   436/436
(100 %)
12 diff
(97.3 %id)
DC426203.
matches multiple genes
mammary gland .a 1436 to 1819 384 to 1     also hits gene FHL1 384/431
(89 %)
16 diff
(96.3 %id)
AA862992 Kidney .a 1454 to 1814 360 to 1       360/360
(100 %)
6 diff
(98.4 %id)
AI935397 Kidney .a 1489 to 1814 337 to 11   AAA   327/327
(100 %)
9 diff
(97.3 %id)
DC361793 Kidney .b 1 to 539 1 to 539   tiling clone,   539/539
(100 %)
1 diff
(99.9 %id)
BP275218 Kidney .b 346 to 926 1 to 581       581/581
(100 %)
0 diff
(100 %id)
NM_005309.2   .b 346 to 2230 1 to 1885 exact RefSeq, AAA   1885/1885
(100 %)
0 diff
(100 %id)
DA077131 cerebellum .b 347 to 850 2 to 505   capped   504/504
(100 %)
0 diff
(100 %id)
DB186976 liver, tumor tissue .b 384 to 819 147 to 582   capped   436/581
(75 %)
6 diff
(99.0 %id)
DC363057 mammary gland .b 388 to 1145 1 to 763   tiling clone,   763/764
(99 %)
11 diff
(98.6 %id)
DA081296 cerebellum .b 390 to 947 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA562652 heart .b 390 to 739 2 to 351   capped   350/350
(100 %)
0 diff
(100 %id)
DA563897 heart .b 390 to 956 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA891408 rectum .b 390 to 900 2 to 512   capped   511/511
(100 %)
1 diff
(99.9 %id)
BP381463 adipose tissue .b 393 to 1013 1 to 619       619/622
(99 %)
21 diff
(96.7 %id)
DA036784 breast .b 396 to 954 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA079927 cerebellum .b 396 to 906 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
AU076466   .b 401 to 618 1 to 218       218/218
(100 %)
1 diff
(99.6 %id)
BP220673 colon .b 402 to 959 1 to 558       558/558
(100 %)
6 diff
(99.0 %id)
BP223276 colon mucosa .b 402 to 969 1 to 567       567/567
(100 %)
6 diff
(99.0 %id)
DA822905 pericardium .b 402 to 972 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA430211 colon .b 404 to 906 2 to 504   capped   503/503
(100 %)
1 diff
(99.9 %id)
BJ994355 hepatoblastoma .b 404 to 861 7 to 464       458/464
(98 %)
6 diff
(98.8 %id)
DA891056 rectum .b 404 to 954 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
BP334517 salivary gland .b 404 to 987 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DB181715 liver, tumor tissue .b 404 to 970 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BP223553 colon mucosa .b 405 to 1063 1 to 662       662/747
(88 %)
7 diff
(99.1 %id)
BP224002 colon mucosa .b 405 to 1158 1 to 758       758/758
(100 %)
21 diff
(97.3 %id)
BP224128 colon mucosa .b 405 to 1046 1 to 647       647/659
(98 %)
6 diff
(99.1 %id)
DA428899 colon .b 405 to 954 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DA429203 colon .b 405 to 961 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA431148 colon .b 405 to 979 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA432337 colon .b 405 to 947 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA432359 colon .b 405 to 975 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA559615 heart .b 405 to 810 2 to 407   capped   406/406
(100 %)
1 diff
(99.8 %id)
DA560039 heart .b 405 to 977 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA564244 heart .b 405 to 947 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA567187 heart .b 405 to 954 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA631615 Kidney .b 405 to 954 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA637633 Liver .b 405 to 947 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA638919 Liver .b 405 to 947 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA668690 esophagus .b 405 to 954 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA821188 pericardium .b 405 to 974 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA890834 rectum .b 405 to 954 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA891091 rectum .b 405 to 972 2 to 571   capped   570/570
(100 %)
4 diff
(99.3 %id)
DA919276 small intestine .b 405 to 964 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BP341569 stomach mucosa .b 405 to 930 1 to 524       524/574
(91 %)
15 diff
(97.4 %id)
DB182338 liver, tumor tissue .b 405 to 963 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB187213 liver, tumor tissue .b 405 to 971 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
R35137 whole brain .b 410 to 810 1 to 406       406/410
(99 %)
11 diff
(97.4 %id)
DA034726 breast .b 418 to 994 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
BG740047 skin .b 420 to 1301 1 to 888   tiling clone,   888/889
(99 %)
25 diff
(97.2 %id)
BI820187 pooled brain, lung, testis .b 420 to 1209 1 to 790   tiling clone,   790/790
(100 %)
2 diff
(99.8 %id)
TI_57199599   .b 420 to 1209 66 to 855       790/855
(92 %)
7 diff
(99.2 %id)
BG743765 skin .b 425 to 992 20 to 579       560/579
(96 %)
10 diff
(98.3 %id)
BG697397 skin .b 431 to 1189 1 to 759   tiling clone,   759/760
(99 %)
5 diff
(99.4 %id)
DA130943 alzheimer cortex .b 435 to 990 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB242089 stomach, tumor tissue .b 452 to 1017 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
CB266898 adipose .b 552 to 1033 1 to 483       483/485
(99 %)
4 diff
(99.2 %id)
R49523 whole brain .b 1925 to 2225 316 to 16   tiling clone, AAA   301/301
(100 %)
3 diff
(99.1 %id)
DC426201 mammary gland .b 1970 to 2230 261 to 1   tiling clone,   261/263
(99 %)
8 diff
(97.0 %id)
DA563635 heart .c 1 to 559 2 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DB318806 heart .c 1363 to 1898 536 to 1   tiling clone,   536/536
(100 %)
3 diff
(99.5 %id)
AK298488 mammary gland .d 1 to 1478 1 to 1478 H14N tiling clone,   1478/1478
(100 %)
3 diff
(99.8 %id)
AK303779 liver, tumor tissue .e 1 to 834 1 to 834   tiling clone,   834/834
(100 %)
0 diff
(100 %id)
DC413067 liver, tumor tissue .e 1 to 560 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC413180 liver, tumor tissue .e 1 to 583 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BG741866 skin .e 606 to 1300 1 to 694   tiling clone,   694/694
(100 %)
1 diff
(99.9 %id)
AI016602   .f-u 1 to 470 482 to 13 G12W tiling clone, AAA   470/470
(100 %)
1 diff
(99.8 %id)
AI283141 placenta .f-u 96 to 470 385 to 12   AAA   374/374
(100 %)
1 diff
(99.8 %id)
DB186815 liver, tumor tissue .g 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
AK225562 Kidney Gene GPT, variant not shown       AAA Suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored    
BP342813 stomach mucosa Gene GPT, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI