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Gene GPR18TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
53 supporting clones for gene GPR18 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI019231 marrow .a-u 1 to 381 416 to 19   tiling clone,   398/424
(93 %)
0 diff
(100 %id)
CB962504 Blood vessels - aorta, basilar and artery .a-u 85 to 808 734 to 2   tiling clone, Submitted on the opposite strand 733/800
(91 %)
0 diff
(100 %id)
CO923328 mixed .a-u 104 to 611 8 to 504   fully sequenced,   497/504
(98 %)
10 diff
(98.1 %id)
CO930170 mixed .a-u 113 to 761 18 to 659       642/789
(81 %)
6 diff
(99.3 %id)
CO921509 mixed .a-u 114 to 690 19 to 589       571/789
(72 %)
17 diff
(97.9 %id)
BT009907   .a-u 119 to 1112 1 to 994   tiling clone,   994/996
(99 %)
1 diff
(99.9 %id)
CV025207 mixed .a-u 119 to 693 1 to 575       575/575
(100 %)
0 diff
(100 %id)
CO927532 mixed .a-u 122 to 553 28 to 461       434/490
(88 %)
9 diff
(98.2 %id)
FN094486 breast carcinoma .a-u 185 to 284 1 to 96       96/98
(97 %)
5 diff
(94.9 %id)
TI_1948121780   .a-u 210 to 1113 1038 to 124       915/1393
(65 %)
0 diff
(100 %id)
BF904556 marrow .a-u 233 to 377 156 to 8     Submitted on the opposite strand 149/156
(95 %)
0 diff
(100 %id)
TI_1948121493   .a-u 247 to 1118 986 to 121       866/1301
(66 %)
0 diff
(100 %id)
TI_1948121630   .a-u 262 to 1118 988 to 119       870/1402
(62 %)
0 diff
(100 %id)
TI_1948121925   .a-u 310 to 1118 933 to 118       816/1406
(58 %)
0 diff
(100 %id)
BI828900 brain, medulla .a-u 347 to 1141 1 to 798       798/799
(99 %)
7 diff
(99.2 %id)
TI_57172715   .a-u 347 to 1141 37 to 834       798/835
(95 %)
7 diff
(99.2 %id)
CN835171 mixed .a-u 383 to 1113 739 to 1       739/840
(87 %)
15 diff
(98.3 %id)
TI_154132243   .a-u 572 to 1251 783 to 102   AAA   682/757
(90 %)
18 diff
(97.7 %id)
CO923358 mixed .a-u 581 to 1128 558 to 12   fully sequenced,   547/558
(98 %)
6 diff
(99.0 %id)
TI_154132264   .a-u 718 to 1251 649 to 112   AAA   538/930
(57 %)
16 diff
(98.3 %id)
AA748438 germinal center B cell .a-u 743 to 1285 545 to 2       544/545
(99 %)
0 diff
(100 %id)
AA825595 germinal center B cell .a-u 764 to 1277 528 to 17   tiling clone, AAA   512/512
(100 %)
14 diff
(97.3 %id)
AA705077 liver and spleen .a-u 779 to 1252 473 to 1       473/473
(100 %)
3 diff
(99.4 %id)
CO916882 mixed .a-u 917 to 1122 223 to 18       206/223
(92 %)
0 diff
(100 %id)
AA744637 germinal center B cell .a-u 919 to 1251 353 to 20   AAA   334/472
(70 %)
5 diff
(99.0 %id)
NM_005292.3   .b 1 to 1660 1 to 1660 exact RefSeq, AAA   1660/1660
(100 %)
0 diff
(100 %id)
BC050646 Lymph, lymphoma .b 55 to 1656 1 to 1602 exact tiling clone, available from MGC, AAA   1602/1602
(100 %)
1 diff
(100.0 %id)
BF796745 lymph, lymphoma, cell line .b 55 to 765 1 to 718       718/1018
(70 %)
28 diff
(97.3 %id)
AW403055 lymph .b 74 to 426 8 to 360       353/360
(98 %)
6 diff
(98.4 %id)
TI_154139609   .b 74 to 698 80 to 705       626/627
(99 %)
32 diff
(94.9 %id)
BF979421 testis .c 1 to 685 1 to 678   tiling clone,   678/1054
(64 %)
38 diff
(96.4 %id)
BC066927 testis .c 6 to 1695 1 to 1690 exact tiling clone, available from MGC, AAA   1690/1690
(100 %)
1 diff
(100.0 %id)
TI_57179879   .c 245 to 1168 28 to 942       915/943
(97 %)
25 diff
(97.4 %id)
BI770379 pooled lung and spleen .c 254 to 1168 1 to 906       906/907
(99 %)
20 diff
(97.8 %id)
NM_001098200.1   .c 254 to 1721 1 to 1468 exact RefSeq, AAA   1468/1468
(100 %)
0 diff
(100 %id)
BU182977 bone marrow, from acute myelogenous leukemia .c 292 to 1050 1 to 766       766/767
(99 %)
20 diff
(97.4 %id)
BC008569 Lymph, lymphoma .c 295 to 1687 1 to 1393 exact tiling clone, available from MGC, AAA   1393/1393
(100 %)
0 diff
(100 %id)
BF794361 lymph, lymphoma, cell line .c 295 to 1095 1 to 804       804/1092
(73 %)
26 diff
(97.7 %id)
FN149598 breast carcinoma .c 303 to 402 97 to 1     Submitted on the opposite strand 97/113
(85 %)
3 diff
(97.4 %id)
CD684625 normal nasopharynx .c 304 to 863 31 to 590       560/590
(94 %)
8 diff
(98.7 %id)
AF339781   .c 305 to 1695 1 to 1390 exact AAA   1390/1390
(100 %)
1 diff
(100.0 %id)
DN997907 breast cancer, Mammary gland (cancer tissue) .c 311 to 1041 1 to 732       732/732
(100 %)
6 diff
(99.2 %id)
AW406896 lymph .c 317 to 794 1 to 478       478/478
(100 %)
6 diff
(98.8 %id)
AW401717 lymph .c 327 to 634 8 to 315       308/315
(97 %)
6 diff
(98.1 %id)
TI_154137872   .c 327 to 901 80 to 656       577/577
(100 %)
22 diff
(96.2 %id)
AW403957 lymph .c 330 to 823 1 to 494       494/494
(100 %)
5 diff
(99.0 %id)
TI_154140684   .c 337 to 909 80 to 652       573/573
(100 %)
5 diff
(99.2 %id)
BX102267 liver and spleen .c 365 to 1020 1 to 656       656/656
(100 %)
0 diff
(100 %id)
AW968257   .c 385 to 1149 1 to 766       766/766
(100 %)
4 diff
(99.5 %id)
AA258898 germinal center B cell .c 385 to 809 1 to 425       425/425
(100 %)
0 diff
(100 %id)
AF261135 dentritic cell .c 386 to 1695 1 to 1317 R78P M79N F80V Y81F Y82I ... AAA   1317/1317
(100 %)
18 diff
(98.7 %id)
AV715386   .c 387 to 959 1 to 573       571/573
(99 %)
13 diff
(97.8 %id)
TI_57196362   .c 433 to 1068 171 to 833       708/834
(84 %)
40 diff
(95.3 %id)
BG501756 embryonal carcinoma, testis .c 468 to 1142 1 to 673       673/673
(100 %)
16 diff
(97.7 %id)
BF980370 testis .c 1053 to 1621 579 to 1       579/1052
(55 %)
24 diff
(97.8 %id)
AW574811 lymph .c 1090 to 1695 623 to 18   AAA   606/606
(100 %)
1 diff
(99.9 %id)
AW574862 lymph .c 1211 to 1695 502 to 18   AAA   485/485
(100 %)
5 diff
(99.0 %id)
AA258793 germinal center B cell .c 1259 to 1696 440 to 3       438/440
(99 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a-u, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C