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Gene NPSR1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
28 supporting clones for gene NPSR1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY956447   .a 1 to 1233 1 to 1233 N108I     1233/1233
(100 %)
1 diff
(100.0 %id)
AY956448   .a 1 to 1233 1 to 1233 exact tiling clone,   1233/1233
(100 %)
0 diff
(100 %id)
AY310327   .b 1 to 1410 1 to 1410 exact tiling clone,   1410/1410
(100 %)
0 diff
(100 %id)
NM_207173.1   .b 1 to 1410 1 to 1410 exact RefSeq,   1410/1410
(100 %)
0 diff
(100 %id)
TI_1752769768   .b 76 to 839 49 to 812   fully sequenced,   764/812
(94 %)
6 diff
(99.3 %id)
BC132693 Brain, cerebellum, PCR rescued clones .b 84 to 1333 1 to 1250 exact     1250/1250
(100 %)
0 diff
(100 %id)
BC132695 Brain, cerebellum, PCR rescued clones .b 84 to 1333 1 to 1250 exact     1250/1250
(100 %)
0 diff
(100 %id)
DY320525 mixed .b 100 to 808 1 to 707       707/731
(96 %)
6 diff
(99.2 %id)
TI_1752769786   .b 778 to 1333 637 to 82   fully sequenced,   556/637
(87 %)
0 diff
(100 %id)
AY310326   .c 1 to 1567 1 to 1567 exact tiling clone,   1567/1567
(100 %)
0 diff
(100 %id)
NM_207172.1   .c 1 to 1567 1 to 1567 exact RefSeq,   1567/1567
(100 %)
0 diff
(100 %id)
AY956446   .c 96 to 1284 1 to 1189 N107I     1189/1189
(100 %)
2 diff
(99.9 %id)
EL951089 eyeball .c 688 to 1233 1 to 546       546/546
(100 %)
5 diff
(99.1 %id)
AI500347 anaplastic oligodendroglioma, brain .c 1206 to 1620 414 to 1   tiling clone,   414/414
(100 %)
8 diff
(98.1 %id)
AY310328   .d 1 to 1377 1 to 1377 exact tiling clone,   1377/1377
(100 %)
0 diff
(100 %id)
TI_2194644766   .e 1 to 1058 48 to 1100 G299V T300L W301G P302Q G303V ... tiling clone,   1053/1283
(82 %)
16 diff
(98.8 %id)
TI_2194645605   .e 1 to 1064 41 to 1098 Q293H R294E E295R N296T W297G ...     1058/1301
(81 %)
14 diff
(99.0 %id)
BC144380 Brain, cerebellum, PCR rescued clones .e 9 to 1060 1 to 1052 exact tiling clone,   1052/1052
(100 %)
0 diff
(100 %id)
TI_2194644776   .e 20 to 1064 1114 to 76 S22P P23Q V24W A25L C26A ...     1039/1185
(87 %)
11 diff
(99.1 %id)
TI_2194645985   .e 20 to 1064 1104 to 65 P2S A3H N4S F5Q T6R ...     1040/1269
(81 %)
9 diff
(99.3 %id)
AY310332   .f 1 to 1369 1 to 1369 exact tiling clone,   1369/1369
(100 %)
0 diff
(100 %id)
AY310330   .g 1 to 1463 1 to 1463 exact tiling clone,   1463/1463
(100 %)
0 diff
(100 %id)
AY310331   .h 1 to 1473 1 to 1473 exact tiling clone,   1473/1473
(100 %)
0 diff
(100 %id)
CD673194 eye, Iris .i 1 to 503 1 to 503 S53R tiling clone,   503/503
(100 %)
1 diff
(99.9 %id)
AK172847   .j 1 to 855 1 to 855 N107I tiling clone, available from FLJ, AAA   855/855
(100 %)
2 diff
(99.8 %id)
BM828553 Ascites, stomach .k 1 to 301 1 to 299 T12H W13G R14G R15E K16R ... tiling clone,   299/299
(100 %)
2 diff
(99.4 %id)
AY310329   .l 1 to 814 1 to 814 exact tiling clone,   814/814
(100 %)
0 diff
(100 %id)
AY255536   Gene NPSR1, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DB041331 testis Gene NPSR1, variant not shown       capped This clone was ignored    
DB337865 testis Gene NPSR1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC