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Gene GNRH1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
53 supporting clones for gene GNRH1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_000825.3   .a 1 to 2148 1 to 2148 exact RefSeq, AAA   2148/2148
(100 %)
0 diff
(100 %id)
CD517130 White Matter .a 382 to 1140 1 to 770   tiling clone, available from MGC,   770/951
(80 %)
25 diff
(97.4 %id)
BC067290 White Matter pool- 5 brain tissues- femoralartery, olfactory tract, optic tract, cerebellar whitematter, cerebral white matter. .a 387 to 2144 1 to 1759 exact tiling clone, available from MGC, AAA   1759/1759
(100 %)
1 diff
(100.0 %id)
DA921079 small intestine .a 397 to 970 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
CF552535 Pooled muscle (cardiac and skeletal) .a 515 to 1390 9 to 886   tiling clone,   878/886
(99 %)
6 diff
(99.4 %id)
BX508951   .a 624 to 1327 1 to 705       705/705
(100 %)
3 diff
(99.6 %id)
BX508966   .a 624 to 1224 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
X01059   .a 638 to 2148 1 to 1512 W20S     1512/1512
(100 %)
4 diff
(99.8 %id)
CN369274 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 838 to 1456 1 to 619       619/619
(100 %)
0 diff
(100 %id)
H38516 brain .a 882 to 1231 1 to 354       354/361
(98 %)
11 diff
(97.0 %id)
BF877876 lung_tumor .a 978 to 1438 470 to 11     Submitted on the opposite strand 460/487
(94 %)
0 diff
(100 %id)
TI_1520872095   .a 1171 to 2024 903 to 50 exact   Submitted on the opposite strand 854/1267
(67 %)
4 diff
(99.7 %id)
TI_1520872101   .a 1171 to 2024 53 to 906 exact   Submitted on the opposite strand 854/1222
(69 %)
11 diff
(99.1 %id)
BC126437 Brain, cerebellum, PCR rescued clones .a 1179 to 2016 1 to 838 exact     838/838
(100 %)
0 diff
(100 %id)
BC126463 Brain, cerebellum, PCR rescued clones .a 1179 to 2016 1 to 837 exact     837/837
(100 %)
2 diff
(99.8 %id)
H87228 eye, retina .a 1272 to 1602 1 to 340       340/340
(100 %)
10 diff
(97.1 %id)
BX104967 eye, retina .a 1273 to 2079 1 to 809 exact     809/809
(100 %)
3 diff
(99.7 %id)
CB243067 Human Lung Epithelial cells, lung .a 1433 to 2148 734 to 19 W20S AAA   716/716
(100 %)
1 diff
(99.9 %id)
AA044049 uterus .a 1476 to 1845 1 to 381   fully sequenced,   381/381
(100 %)
11 diff
(97.2 %id)
BF511936   .a 1640 to 2148 526 to 18 exact tiling clone, AAA   509/509
(100 %)
3 diff
(99.5 %id)
TI_1520873849   .a 1646 to 2017 1 to 369 exact     369/1287
(28 %)
9 diff
(99.4 %id)
H87229 eye, retina .a 1731 to 2124 405 to 1       405/410
(98 %)
14 diff
(96.6 %id)
AA043996 uterus .a 1815 to 2148 336 to 1   fully sequenced,   336/336
(100 %)
1 diff
(99.8 %id)
H38517 brain .a 1850 to 2121 272 to 1       272/277
(98 %)
4 diff
(98.6 %id)
DB263000 uterus .b 1 to 582 2 to 579   tiling clone, capped   578/578
(100 %)
2 diff
(99.7 %id)
CN284129 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 33 to 754 3 to 720       718/720
(99 %)
6 diff
(99.2 %id)
AI457202 carcinoid, lung .b 528 to 986 1 to 459     Submitted on the opposite strand 459/459
(100 %)
0 diff
(100 %id)
CB269203 adipose .b 543 to 1189 1 to 645   tiling clone,   645/645
(100 %)
4 diff
(99.4 %id)
CN289131 embryonic stem cells, DMSO-treated H9 cellline .b 650 to 1050 1 to 401       401/401
(100 %)
1 diff
(99.8 %id)
BG540893 lung .b 806 to 1425 1 to 635   tiling clone,   635/635
(100 %)
26 diff
(96.0 %id)
DA554639   .b 955 to 1205 2 to 252   tiling clone, capped   251/251
(100 %)
0 diff
(100 %id)
AL047164 uterus .b 1263 to 1839 1 to 578   tiling clone,   578/582
(99 %)
2 diff
(99.7 %id)
NM_001083111.1   .b 1263 to 2541 1 to 1279 exact RefSeq, AAA   1279/1279
(100 %)
0 diff
(100 %id)
AA418885 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1288 to 1630 1 to 343   fully sequenced,   343/343
(100 %)
0 diff
(100 %id)
AL041184 testis .b 1298 to 1719 219 to 638       420/643
(65 %)
7 diff
(99.0 %id)
AW978675   .b 1310 to 1933 629 to 1     Submitted on the opposite strand 629/639
(98 %)
11 diff
(98.3 %id)
DB257000 uterus .b 1394 to 1981 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA841368 placenta .b 1395 to 1930 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
DB121525 thymus .b 1395 to 1953 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
AW296153   .b 1475 to 1946 477 to 6   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 472/477
(98 %)
0 diff
(100 %id)
AI290681 carcinoid, lung .b 1477 to 1933 457 to 1       457/457
(100 %)
0 diff
(100 %id)
BE467538 carcinoid, lung .b 1483 to 1933 451 to 1       451/451
(100 %)
0 diff
(100 %id)
AI807723 carcinoid, lung .b 1502 to 1928 433 to 7       427/433
(98 %)
0 diff
(100 %id)
AA418886 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1600 to 1934 335 to 1   fully sequenced,   335/335
(100 %)
0 diff
(100 %id)
AA831002 germinal center B cell .b 1609 to 1946 338 to 1       338/338
(100 %)
1 diff
(99.8 %id)
BI031912 marrow .b 1713 to 2028 11 to 326   tiling clone,   316/328
(96 %)
6 diff
(98.2 %id)
AI936056 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 1760 to 1934 175 to 1       175/175
(100 %)
2 diff
(98.9 %id)
W05214 lung .b 1815 to 1928 1 to 114       114/114
(100 %)
0 diff
(100 %id)
M12578 hypothalamus .b 2072 to 2541 1 to 470 exact tiling clone,   470/470
(100 %)
0 diff
(100 %id)
AI014477 breast .b 2101 to 2541 440 to 1 K2R A9L G10A I12F L13Y ...     440/440
(100 %)
2 diff
(99.6 %id)
BF511931   .b 2164 to 2541 395 to 18   AAA   378/378
(100 %)
2 diff
(99.5 %id)
AI970059 Prostate .b 2198 to 2543 348 to 3       346/348
(99 %)
0 diff
(100 %id)
N74305 lung .b 2252 to 2541 291 to 1       291/291
(100 %)
1 diff
(99.7 %id)
AI933991 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2310 to 2541 229 to 1       229/232
(98 %)
8 diff
(96.6 %id)
BG202058   .b 2338 to 2537 1 to 202   AAA   202/202
(100 %)
10 diff
(95.1 %id)
BG201415   .b 2339 to 2540 12 to 219   AAA   208/219
(94 %)
6 diff
(97.3 %id)
BG182428   .b 2347 to 2539 25 to 220       196/221
(88 %)
14 diff
(93.7 %id)
GD138004   .b 2416 to 2543 1 to 128       128/139
(92 %)
3 diff
(97.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DI