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Gene ZNF461TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
77 supporting clones for gene ZNF461 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC328991 corpus callosum .a 1 to 571 1 to 571   tiling clone,   571/571
(100 %)
0 diff
(100 %id)
DC389558 Spleen .a 1 to 591 1 to 592       592/592
(100 %)
5 diff
(99.2 %id)
AY329493   .a 17 to 2600 1 to 2584 exact tiling clone,   2584/2584
(100 %)
2 diff
(100.0 %id)
BU664229 blood .a 17 to 476 19 to 479       461/608
(75 %)
9 diff
(98.6 %id)
DC354088 brain .a 17 to 586 1 to 571       571/571
(100 %)
4 diff
(99.3 %id)
NM_153257.2   .a 17 to 3208 1 to 3192 exact RefSeq,   3192/3192
(100 %)
5 diff
(99.9 %id)
DA710373   .a 18 to 578 2 to 564   capped   561/563
(99 %)
4 diff
(99.3 %id)
DB283201 uterus .a 18 to 569 2 to 554   capped   551/553
(99 %)
2 diff
(99.7 %id)
AK292834 trachea .a 26 to 2139 1 to 2114 exact     2114/2114
(100 %)
3 diff
(99.9 %id)
DC308339 cerebellum .a 26 to 552 1 to 528       528/528
(100 %)
4 diff
(99.3 %id)
DA242124 brain .a 27 to 606 2 to 583   capped   580/582
(99 %)
3 diff
(99.5 %id)
DB059372 testis .a 27 to 544 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
DB216277 trachea .a 27 to 545 2 to 520   capped   519/527
(98 %)
1 diff
(99.9 %id)
CB990312 Human Placenta, placenta .a 29 to 195 20 to 186       167/187
(89 %)
7 diff
(96.3 %id)
AA213612   .a 37 to 507 1 to 474       474/474
(100 %)
14 diff
(97.1 %id)
DR004274 placenta .a 38 to 794 1 to 757       757/757
(100 %)
6 diff
(99.3 %id)
CX867394 embryonic stem .a 46 to 855 1 to 810       810/810
(100 %)
1 diff
(99.9 %id)
CX867319 embryonic stem .a 1502 to 2155 682 to 29   tiling clone, AAA   654/654
(100 %)
3 diff
(99.6 %id)
AA213477   .a 2360 to 2687 336 to 2   tiling clone,   335/418
(80 %)
0 diff
(100 %id)
AK299370   .b 1 to 2361 1 to 2361 exact tiling clone,   2361/2361
(100 %)
0 diff
(100 %id)
DC372833   .b 1 to 551 1 to 552       550/552
(99 %)
2 diff
(99.7 %id)
DC383222 Prostate .b 4 to 535 1 to 533       533/533
(100 %)
4 diff
(99.3 %id)
DA213459 brain .b 6 to 548 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA712680   .b 24 to 588 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DC426505 Prostate .b 1595 to 2165 570 to 1       570/570
(100 %)
2 diff
(99.7 %id)
DB090951 testis .c 1 to 586 2 to 588   tiling clone, capped   587/587
(100 %)
4 diff
(99.4 %id)
BX649031 human retina .c 8 to 3311 1 to 3306 R38G K277E tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 3306/3306
(100 %)
13 diff
(99.7 %id)
DA726148   .c 14 to 577 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
AA326608 brain, cerebellum .c 350 to 737 1 to 389       389/390
(99 %)
4 diff
(99.0 %id)
TI_1948128182   .c 557 to 1251 124 to 818       695/1097
(63 %)
16 diff
(98.6 %id)
TI_1948128183   .c 557 to 1363 132 to 946   tiling clone,   815/1114
(73 %)
21 diff
(98.2 %id)
TI_1948128517   .c 557 to 1469 127 to 1019       893/1135
(78 %)
32 diff
(97.2 %id)
TI_1948129186   .c 557 to 1278 124 to 843       720/1118
(64 %)
11 diff
(99.1 %id)
TI_1948129187   .c 557 to 1299 133 to 881       749/1152
(65 %)
11 diff
(99.1 %id)
CV024590 mixed .c 563 to 1061 1 to 499       499/499
(100 %)
2 diff
(99.6 %id)
TI_1948128519   .c 752 to 1872 1238 to 124       1115/1324
(84 %)
0 diff
(100 %id)
BF541218 hypernephroma, Kidney .c 770 to 1245 1 to 479       479/479
(100 %)
7 diff
(98.6 %id)
TI_1948129188   .c 845 to 1872 1164 to 123       1042/1360
(76 %)
0 diff
(100 %id)
DN992822 brain, whole brain .c 845 to 1525 1 to 681       681/681
(100 %)
5 diff
(99.3 %id)
TI_1948128184   .c 897 to 1872 1090 to 124       967/1322
(73 %)
0 diff
(100 %id)
AB021641   .c 909 to 3145 1 to 2237   tiling clone,   2237/2237
(100 %)
3 diff
(99.9 %id)
TI_1948128520   .c 982 to 1872 1009 to 120       890/1010
(88 %)
0 diff
(100 %id)
TI_1948129189   .c 983 to 1872 1012 to 122       891/1013
(87 %)
0 diff
(100 %id)
TI_1948128185   .c 1070 to 1872 926 to 122       805/1014
(79 %)
0 diff
(100 %id)
TI_1948128261   .c 1153 to 1872 843 to 106       738/985
(74 %)
0 diff
(100 %id)
BI460349 testis .c 1177 to 1984 1 to 811       811/811
(100 %)
21 diff
(97.5 %id)
BG434840 placenta .c 1293 to 1893 1 to 599       599/599
(100 %)
5 diff
(99.2 %id)
BM713670 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1361 to 2013 1 to 653       653/653
(100 %)
0 diff
(100 %id)
AW304212 brain, three pooled meningiomas .c 1467 to 1929 470 to 7       464/471
(98 %)
0 diff
(100 %id)
AI264877   .c 1552 to 2095 543 to 1       543/543
(100 %)
3 diff
(99.5 %id)
TI_151753571   .c 1559 to 2095 642 to 102       541/671
(80 %)
0 diff
(100 %id)
DA040091 bladder .c 1832 to 2311 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
AW974543   .c 2088 to 2682 1 to 595       595/718
(82 %)
5 diff
(99.4 %id)
AA651904 germinal center B cell .c 2091 to 2571 6 to 488     Submitted on the opposite strand 483/488
(98 %)
6 diff
(98.8 %id)
AA770536 pooled .c 2098 to 2642 1 to 545     Submitted on the opposite strand 545/545
(100 %)
0 diff
(100 %id)
BG913416 anaplastic oligodendroglioma with 1p/19qloss, brain .c 2114 to 2573 473 to 1     Submitted on the opposite strand 473/912
(51 %)
15 diff
(98.4 %id)
AA649229 germinal center B cell .c 2170 to 2387 1 to 218     Submitted on the opposite strand 218/218
(100 %)
0 diff
(100 %id)
FN122922 breast carcinoma .c 2276 to 2388 113 to 1     Submitted on the opposite strand 113/113
(100 %)
0 diff
(100 %id)
H10479 whole brain .c 2292 to 2575 290 to 1     Submitted on the opposite strand 290/290
(100 %)
6 diff
(98.0 %id)
AW079205 colon, juvenile granulosa tumor .c 2308 to 2616 309 to 1       309/309
(100 %)
0 diff
(100 %id)
CR746962 bladder, transitional cell papilloma, cell line .d 1 to 480 9 to 488   tiling clone,   480/488
(98 %)
5 diff
(99.0 %id)
BG288843 bladder, transitional cell papilloma, cell line .d 4 to 766 1 to 757   tiling clone,   757/918
(82 %)
20 diff
(97.9 %id)
TI_1948128861   .d 644 to 1590 1086 to 124   tiling clone,   963/1452
(66 %)
45 diff
(97.0 %id)
TI_1948128862   .d 701 to 1590 1009 to 124   tiling clone,   886/1010
(87 %)
28 diff
(97.3 %id)
BI552797 brain, hippocampus .e 1 to 707 1 to 708       708/708
(100 %)
7 diff
(99.1 %id)
BC028631 Brain, hippocampus .e 6 to 1749 6 to 1749 exact tiling clone, available from MGC, AAA   1744/1744
(100 %)
2 diff
(99.9 %id)
TI_44170601   .e 6 to 707 128 to 830       703/830
(84 %)
7 diff
(99.2 %id)
BI464798 testis .f 1 to 851 1 to 861 S2G K103P K104H C105S R106V ... tiling clone,   861/863
(99 %)
38 diff
(95.6 %id)
DC339675 thalamus .g 1 to 545 1 to 546 S93G Q96R tiling clone,   546/546
(100 %)
8 diff
(98.6 %id)
DA127380 cerebellum .h 1 to 571 2 to 573 exact tiling clone, capped   572/572
(100 %)
2 diff
(99.7 %id)
DA043412 bladder .h 2 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
5 diff
(99.2 %id)
DB141624 thymus .h 2 to 532 2 to 533 exact capped   532/532
(100 %)
2 diff
(99.7 %id)
BX954738   .h 372 to 1035 1 to 664   tiling clone,   664/664
(100 %)
7 diff
(99.0 %id)
BI545486 brain, hippocampus .i-u 1 to 660 1 to 661 N54K T56S K59E Y66C tiling clone,   661/662
(99 %)
6 diff
(99.1 %id)
TI_44165564   .i-u 8 to 660 128 to 781 N54K T56S K59E Y66C     654/782
(83 %)
11 diff
(98.6 %id)
DB481279 hippocampus .i-u 9 to 436 1 to 430       430/430
(100 %)
5 diff
(98.9 %id)
AY500360   Gene ZNF461, variant not shown         Suspected internal deletion, this clone was ignored    
BG900129 cartilage Gene ZNF461, variant not shown         Suspected internal deletion, this clone was ignored    
DA106306 cerebellum Gene ZNF461, variant not shown       capped This clone was ignored    
DC308305 cerebellum Gene ZNF461, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI