cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AY429112 | brain | .a | 50 to 1150 | 1 to 1101 | exact | 1101/1101 (100 %) | 1 diff (100.0 %id) | ||
BC069068 | Synthetic constructs | .b-u | 44 to 914 | 1 to 871 | exact | tiling clone, available from MGC, | 871/871 (100 %) | 2 diff (99.8 %id) | |
BC069374 | PCR rescued clones | .b-u | 44 to 913 | 1 to 870 | exact | available from MGC, | 870/870 (100 %) | 3 diff (99.7 %id) | |
BC113547 | Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones | .a | 7 to 1178 | 1 to 1172 | exact | tiling clone, | 1172/1172 (100 %) | 1 diff (100.0 %id) | |
TI_1243019367 | .a | 437 to 1178 | 799 to 53 | Submitted on the opposite strand | 747/799 (93 %) | 13 diff (98.4 %id) | |||
TI_1243022391 | .a | 1 to 708 | 707 to 1 | 707/1195 (59 %) | 8 diff (99.4 %id) | ||||
TI_1243023057 | .a | 274 to 1178 | 961 to 58 | Submitted on the opposite strand | 904/962 (93 %) | 5 diff (99.5 %id) | |||
TI_1243023441 | .a | 1 to 679 | 61 to 740 | tiling clone, | Submitted on the opposite strand | 680/763 (89 %) | 17 diff (97.8 %id) | ||
BX095876 | carcinoid, lung | .a | 2138 to 2882 | 1 to 745 | tiling clone, | 745/745 (100 %) | 1 diff (99.9 %id) | ||
CD618066 | .a | 1 to 636 | 1 to 629 | 629/632 (99 %) | 16 diff (97.5 %id) | ||||
CD618067 | .a | 65 to 636 | 574 to 1 | 574/576 (99 %) | 14 diff (97.6 %id) | ||||
CD618068 | .a | 1 to 636 | 1 to 631 | 631/634 (99 %) | 14 diff (97.8 %id) | ||||
CD618069 | .a | 1 to 636 | 635 to 1 | 635/635 (100 %) | 11 diff (98.3 %id) | ||||
CD618070 | .a | 1 to 636 | 640 to 1 | 640/640 (100 %) | 11 diff (98.3 %id) | ||||
CD618071 | .a | 1 to 636 | 1 to 637 | 637/640 (99 %) | 7 diff (99.0 %id) | ||||
CD618072 | .a | 1 to 601 | 1 to 596 | 596/596 (100 %) | 18 diff (97.0 %id) | ||||
CD618073 | .a | 1 to 636 | 631 to 1 | 631/631 (100 %) | 21 diff (96.7 %id) | ||||
CD618074 | .a | 1 to 636 | 631 to 1 | 631/631 (100 %) | 19 diff (97.0 %id) | ||||
CD618075 | .a | 1 to 636 | 1 to 632 | 632/635 (99 %) | 13 diff (98.0 %id) | ||||
CD618076 | .a | 1 to 636 | 637 to 1 | 637/637 (100 %) | 9 diff (98.6 %id) | ||||
CD618077 | .a | 1 to 624 | 1 to 623 | 623/643 (96 %) | 11 diff (98.3 %id) | ||||
AA910714 | carcinoid, lung | .a | 2662 to 3016 | 355 to 1 | 355/355 (100 %) | 0 diff (100 %id) | |||
AI733109 | carcinoid, lung | .a | 2459 to 3016 | 558 to 1 | 558/558 (100 %) | 0 diff (100 %id) | |||
AI791606 | carcinoid, lung | .a | 2138 to 2658 | 1 to 521 | 521/521 (100 %) | 2 diff (99.7 %id) | |||
AA932375 | carcinoid, lung | .a | 2690 to 3017 | 328 to 1 | 328/328 (100 %) | 0 diff (100 %id) | |||
AI298420 | carcinoid, lung | .a | 2455 to 2896 | 1 to 442 | Submitted on the opposite strand | 442/442 (100 %) | 0 diff (100 %id) | ||
AI680813 | carcinoid, lung | .a | 2555 to 3020 | 467 to 1 | 467/467 (100 %) | 3 diff (99.4 %id) | |||
AW014637 | .a | 2591 to 3017 | 444 to 18 | tiling clone, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 427/427 (100 %) | 0 diff (100 %id) | ||
BE670615 | carcinoid, lung | .a | 1681 to 2190 | 1 to 511 | tiling clone, | Submitted on the opposite strand | 511/511 (100 %) | 2 diff (99.7 %id) | |
BF433663 | carcinoid, lung | .a | 2484 to 3020 | 537 to 1 | 537/537 (100 %) | 1 diff (99.9 %id) | |||
CO922199 | mixed | .a | 609 to 1185 | 573 to 6 | tiling clone, | 568/628 (90 %) | 16 diff (97.5 %id) | ||
CO922234 | mixed | .a | 7 to 254 | 1 to 248 | 248/255 (97 %) | 5 diff (98.1 %id) | |||
CO959340 | mixed | .a | 508 to 1151 | 658 to 19 | 640/770 (83 %) | 9 diff (98.9 %id) | |||
CO959347 | mixed | .a | 49 to 248 | 1 to 201 | tiling clone, | 201/202 (99 %) | 6 diff (97.1 %id) | ||
NM_004122.2 | .b-u | 1 to 914 | 1 to 914 | exact | RefSeq, | 914/914 (100 %) | 0 diff (100 %id) | ||
NM_198407.2 | .a | 7 to 3020 | 1 to 3014 | exact | RefSeq, | 3014/3014 (100 %) | 0 diff (100 %id) | ||
U60179 | pituitary gland | .a | 50 to 1150 | 1 to 1101 | exact | 1101/1101 (100 %) | 1 diff (100.0 %id) | ||
U60181 | pituitary gland | .b-u | 44 to 913 | 1 to 870 | exact | tiling clone, | 870/870 (100 %) | 1 diff (99.9 %id) | |
BF433663 | carcinoid, lung | .a | 2484 to 3020 | 537 to 1 | 537/537 (100 %) | 1 diff (99.9 %id) | |||
CO922199 | mixed | .a | 609 to 1185 | 573 to 6 | tiling clone, | 568/628 (90 %) | 16 diff (97.5 %id) | ||
CO922234 | IMAGE:7211800 | GHSR.aAug10 | 254 | 248 | IMAGE:7211800 | 248 | 5 | ||
CO959340 | IMAGE:7389767 | GHSR.aAug10 | 1151 | 19 | IMAGE:7389767 | 640 | 9 | ||
CO959347 | IMAGE:7389767 | GHSR.aAug10 | 248 | 201 | IMAGE:7389767 | 201 | 6 | ||
NM_004122.2 | NM_004122 | GHSR.bAug10-unspliced | 914 | 914 | NM_004122 | 914 | 0 | ||
NM_198407.2 | NM_198407 | GHSR.aAug10 | 3020 | 3014 | NM_198407 | 3014 | 0 | ||
U60179 | U60179 | GHSR.aAug10 | 1150 | 1101 | U60179 | 1101 | 1 | ||
U60181 | U60181 | GHSR.bAug10-unspliced | 913 | 870 | U60181 | 870 | 1 |
? | Gene Summary | Gene on genome | mRNA:.a, .b-u | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes DCI |