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Gene GBX2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
30 supporting clones for gene GBX2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF118452   .a 1 to 1174 1 to 1174 exact     1174/1174
(100 %)
1 diff
(100.0 %id)
BC137448 Brain, cerebellum, PCR rescued clones .a 1 to 1269 1 to 1269 exact     1269/1269
(100 %)
0 diff
(100 %id)
BC137449 Brain, cerebellum, PCR rescued clones .a 1 to 1270 1 to 1270 exact tiling clone,   1270/1270
(100 %)
0 diff
(100 %id)
NM_001485.2   .a 1 to 1335 1 to 1335 exact RefSeq,   1335/1335
(100 %)
0 diff
(100 %id)
DR760752 embryonic stem .a 100 to 899 1 to 800       800/800
(100 %)
0 diff
(100 %id)
CD611884   .a 495 to 832 335 to 1       335/342
(97 %)
3 diff
(99.2 %id)
CX873746 embryonic stem .b 1 to 755 1 to 755   tiling clone,   755/755
(100 %)
0 diff
(100 %id)
CX870639 embryonic stem .b 17 to 495 1 to 479       479/479
(100 %)
1 diff
(99.8 %id)
TI_2194695803   .b 361 to 1472 50 to 1154 exact     1105/1283
(86 %)
37 diff
(97.2 %id)
TI_2194699366   .b 361 to 1347 55 to 1039 exact     985/1243
(79 %)
9 diff
(99.3 %id)
BC144646 Brain, cerebellum, PCR rescued clones .b 361 to 1667 1 to 1307 exact tiling clone,   1307/1307
(100 %)
0 diff
(100 %id)
TI_2194699746   .b 577 to 1667 1152 to 68       1085/1276
(85 %)
10 diff
(99.3 %id)
TI_2194695813   .b 732 to 1667 1011 to 71       941/1012
(92 %)
21 diff
(98.0 %id)
AA305563 colon .b 972 to 1406 12 to 443       432/443
(97 %)
6 diff
(98.7 %id)
CD611888   .b 974 to 1226 250 to 1       250/256
(97 %)
8 diff
(96.9 %id)
CD611889   .b 974 to 1229 7 to 262       256/263
(97 %)
4 diff
(98.5 %id)
BM747771 stomach .b 1056 to 1633 1 to 579       579/579
(100 %)
3 diff
(99.5 %id)
BM747801 stomach .b 1056 to 1648 1 to 593       593/593
(100 %)
0 diff
(100 %id)
CD611886   .b 1093 to 1229 1 to 137       137/138
(99 %)
2 diff
(98.6 %id)
CD611887   .b 1093 to 1226 135 to 1       135/135
(100 %)
3 diff
(97.8 %id)
BX094347 pooled germ cell tumors .b 1295 to 1732 1 to 438   tiling clone, AAA   438/438
(100 %)
0 diff
(100 %id)
AA933790 pooled germ cell tumors .b 1318 to 1732 424 to 11   AAA   414/414
(100 %)
3 diff
(99.3 %id)
BF115559 brain, glioblastoma (pooled) .b 1318 to 1732 415 to 1       415/415
(100 %)
0 diff
(100 %id)
AA176205   .b 1656 to 2158 536 to 35   tiling clone, AAA   502/513
(97 %)
6 diff
(98.9 %id)
BE463746 pooled germ cell tumors .b 1758 to 2109 377 to 26   tiling clone, AAA   352/352
(100 %)
1 diff
(99.8 %id)
AK311262 thalamus .c 1 to 896 1 to 896 exact tiling clone,   896/896
(100 %)
0 diff
(100 %id)
DC341652 thalamus .c 1 to 583 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BG827869 muscle, rhabdomyosarcoma .c 6 to 781 1 to 778 V118A K119E A120G G121R N122Q ...     778/778
(100 %)
10 diff
(98.8 %id)
CX872722 embryonic stem .c 6 to 795 1 to 790 exact     790/790
(100 %)
1 diff
(99.9 %id)
CD611885   Gene GBX2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC