To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene GBGT1andRALGDSTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
563 supporting clones for gene GBGT1andRALGDS back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK293997 cerebellum .a 1 to 3704 2 to 3705 N908S tiling clone,   3705/3705
(100 %)
4 diff
(99.9 %id)
DC304974 cerebellum .a 1 to 562 2 to 563       563/563
(100 %)
0 diff
(100 %id)
DC310025 cerebellum .a 1 to 540 2 to 541       541/541
(100 %)
1 diff
(99.9 %id)
DC367520   .a 1 to 518 2 to 519       519/519
(100 %)
0 diff
(100 %id)
DC415207 trachea .a 1 to 477 2 to 478       478/478
(100 %)
3 diff
(99.4 %id)
DC337477 substantia nigra .a 2 to 560 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
DA731927   .a 3 to 392 2 to 391   capped   390/390
(100 %)
2 diff
(99.5 %id)
DA687143   .a 5 to 342 2 to 339   capped   338/338
(100 %)
0 diff
(100 %id)
BP305112   .a 6 to 417 1 to 412       412/583
(70 %)
10 diff
(98.3 %id)
AA322892 brain, cerebellum .a 84 to 232 1 to 150       150/150
(100 %)
2 diff
(98.7 %id)
BE276395 melanotic melanoma, skin .a 876 to 1498 1 to 626       626/626
(100 %)
14 diff
(97.8 %id)
BF125104 melanotic melanoma, skin .a 876 to 1600 1 to 706       706/853
(82 %)
37 diff
(95.7 %id)
CN342840 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 894 to 1632 1 to 739       739/739
(100 %)
0 diff
(100 %id)
DA520466 brain .a 906 to 1472 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BP265297 thyroid .a 906 to 1488 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
CR987492 T-Lymphocytes .a 915 to 1606 1 to 692       692/694
(99 %)
1 diff
(99.9 %id)
DA792611 brain .a 954 to 1417 2 to 465   capped   464/464
(100 %)
0 diff
(100 %id)
DA804351 brain .a 963 to 1515 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
CN342843 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 979 to 1660 1 to 682       682/682
(100 %)
3 diff
(99.6 %id)
BF092032 testis_normal .a 1022 to 1435 415 to 1       415/415
(100 %)
19 diff
(95.5 %id)
DA187471 amygdala .a 1040 to 1582 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
BM008759 adenocarcinoma, Pancreas .a 1085 to 1894 1 to 808       808/808
(100 %)
8 diff
(99.1 %id)
TI_59386471   .a 1086 to 1894 62 to 868       807/807
(100 %)
7 diff
(99.2 %id)
CO246106 Chondrosarcoma Lung Metastasis cell lines, lung .a 1089 to 1835 47 to 782       736/837
(87 %)
33 diff
(96.1 %id)
BE312028 brain, neuroblastoma .a 1109 to 1746 1 to 638       638/638
(100 %)
8 diff
(98.8 %id)
AW889607 nervous_tumor .a 1136 to 1307 1 to 177       177/178
(99 %)
14 diff
(92.2 %id)
BP197467 adrenal gland .a 1144 to 1725 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BM810028 astrocytoma grade IV, cell line, brain .a 1176 to 2099 1 to 924       924/1145
(80 %)
11 diff
(99.1 %id)
BP359013 mammary gland .a 1187 to 1768 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
CV428495 nervous_normal .a 1246 to 1642 1 to 398       398/398
(100 %)
13 diff
(96.8 %id)
DA260167 caudate nucleus .a 1253 to 1831 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA073912 cerebellum .a 1255 to 1835 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA526642 brain .a 1269 to 1822 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA803870 brain .a 1269 to 1817 2 to 550   capped   549/549
(100 %)
3 diff
(99.5 %id)
DA291857 hippocampus .a 1292 to 1782 2 to 497   capped   496/496
(100 %)
8 diff
(98.4 %id)
DA033834   .a 1303 to 1872 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA884388   .a 1322 to 1894 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA459168 tongue, tumor tissue .a 1325 to 1897 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
DA452827 tongue, tumor tissue .a 1329 to 1895 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB137112 thymus .a 1341 to 1879 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
BF960562 nervous_normal .a 1357 to 1593 1 to 237       237/237
(100 %)
9 diff
(96.3 %id)
CN342842 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1369 to 1822 1 to 454       454/454
(100 %)
3 diff
(99.4 %id)
DA436928 tongue, tumor tissue .a 1424 to 2013 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
AA322799 brain, cerebellum .a 1442 to 1712 1 to 270       270/270
(100 %)
3 diff
(98.9 %id)
BP223991 colon mucosa .a 1442 to 2196 1 to 761       759/907
(83 %)
13 diff
(98.6 %id)
BF845392 head_neck .a 1513 to 1953 443 to 4     Submitted on the opposite strand 440/443
(99 %)
5 diff
(98.9 %id)
BF845397 head_neck .a 1522 to 1957 450 to 16     Submitted on the opposite strand 435/450
(96 %)
3 diff
(99.4 %id)
BQ359669 head_normal .a 1524 to 1801 317 to 41       277/541
(51 %)
5 diff
(99.1 %id)
DA784649 brain .a 1527 to 2121 2 to 599   capped   598/598
(100 %)
3 diff
(99.5 %id)
BF347174 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1543 to 2252 13 to 726       712/866
(82 %)
17 diff
(98.1 %id)
DA104115 cerebellum .a 1570 to 2124 2 to 556   capped   555/555
(100 %)
5 diff
(99.1 %id)
DA503842 brain .a 1573 to 2131 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA700845   .a 1610 to 2122 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
BG423995 Kidney, renal cell adenocarcinoma .a 1619 to 2068 1 to 450       450/450
(100 %)
2 diff
(99.6 %id)
CR988698 T-Lymphocytes .a 1663 to 2547 1 to 884       884/884
(100 %)
2 diff
(99.8 %id)
BP206983 coronary artery .a 1672 to 2238 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
DA095864 cerebellum .a 1679 to 2243 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BF991669 placenta_normal .a 1698 to 2099 17 to 415       399/426
(93 %)
9 diff
(97.9 %id)
DA888505   .a 1718 to 2269 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
BE884275 leiomyosarcoma, uterus .a 1731 to 2226 1 to 493       493/510
(96 %)
7 diff
(98.7 %id)
AU311035 neuroblastoma .a 1744 to 2333 11 to 600       590/600
(98 %)
6 diff
(99.0 %id)
CN342841 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1752 to 2133 1 to 382       382/382
(100 %)
5 diff
(98.7 %id)
EB388304 eye, optic nerve .a 1793 to 2079 8 to 294       287/294
(97 %)
9 diff
(97.0 %id)
DA702253   .a 1796 to 2304 2 to 510   capped   509/509
(100 %)
1 diff
(99.9 %id)
DA007477   .a 1801 to 2371 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BM044991 carcinoma, cell line, Prostate .a 1803 to 2704 1 to 912       912/943
(96 %)
19 diff
(98.0 %id)
BM908907 astrocytoma grade IV, cell line, brain .a 1806 to 2706 1 to 907       907/1175
(77 %)
7 diff
(99.5 %id)
DB262666 uterus .a 1811 to 2289 2 to 480   capped   479/479
(100 %)
1 diff
(99.8 %id)
DA707214   .a 1826 to 2324 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DA276726 corpus callosum .a 1852 to 2238 187 to 573   capped   387/572
(67 %)
6 diff
(99.0 %id)
DA685577   .a 1863 to 2418 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
CT001560 T-Lymphocytes .a 1920 to 2639 1 to 721       721/722
(99 %)
2 diff
(99.8 %id)
CT004912 T-Lymphocytes .a 1920 to 2787 1 to 867       867/869
(99 %)
5 diff
(99.5 %id)
CR979674 T-Lymphocytes .a 1920 to 2561 1 to 642       642/642
(100 %)
0 diff
(100 %id)
DA710388   .a 1925 to 2481 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BP302026   .a 1941 to 2521 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
AA322186 brain, cerebellum .a 1972 to 2313 1 to 342       342/342
(100 %)
1 diff
(99.8 %id)
BI006478 kidney_tumor .a 2008 to 2453 453 to 2       449/465
(96 %)
22 diff
(95.3 %id)
BG757142 B-cells, primary B-cells from tonsils (cell line) .a 2008 to 2863 8 to 862       857/991
(86 %)
27 diff
(97.3 %id)
BG759439 B-cells, primary B-cells from tonsils (cell line) .a 2008 to 2775 8 to 772   available from MGC,   765/960
(79 %)
25 diff
(97.4 %id)
AA325898 brain, cerebellum .a 2021 to 2447 1 to 427       427/427
(100 %)
10 diff
(97.7 %id)
DA753288   .a 2023 to 2570 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA225641 brain .a 2052 to 2619 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BM742547 Ascites, stomach .a 2096 to 2720 2 to 624       623/624
(99 %)
2 diff
(99.7 %id)
BM756994 Ascites, stomach .a 2096 to 2515 2 to 420       419/420
(99 %)
1 diff
(99.8 %id)
BM767306 Ascites, stomach .a 2096 to 2735 2 to 640       639/640
(99 %)
1 diff
(99.9 %id)
AA375538 lung .a 2115 to 2369 1 to 259       259/259
(100 %)
6 diff
(97.7 %id)
BG290497 bladder, transitional cell papilloma, cell line .a 2129 to 2745 1 to 615       615/956
(64 %)
6 diff
(99.4 %id)
H19200 whole brain .a 2133 to 2609 1 to 486       486/493
(98 %)
21 diff
(95.8 %id)
TI_59386605   .a 2151 to 2949 61 to 859       799/812
(98 %)
5 diff
(99.4 %id)
BM008886 adenocarcinoma, Pancreas .a 2152 to 2949 1 to 798       798/811
(98 %)
5 diff
(99.4 %id)
BF845387 head_neck .a 2164 to 2608 31 to 474       443/474
(93 %)
15 diff
(96.9 %id)
BF958950 nervous_normal .a 2166 to 2414 268 to 17       252/297
(84 %)
10 diff
(96.7 %id)
CD107021 brain, Pituitary .a 2215 to 3059 23 to 884       874/896
(97 %)
66 diff
(92.7 %id)
DB001187 breast, tumor tissue .a 2218 to 2778 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BP192944 brain .a 2228 to 2809 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
M86105   .a 2239 to 2495 1 to 256       256/256
(100 %)
2 diff
(99.3 %id)
BI003675 head_normal .a 2242 to 2406 1 to 164       164/168
(97 %)
3 diff
(98.3 %id)
DA256782 caudate nucleus .a 2247 to 2777 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
U14417   .a 2252 to 3294 1 to 1042   tiling clone,   1042/1042
(100 %)
1 diff
(100.0 %id)
CN350730 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2254 to 2667 1 to 414       414/414
(100 %)
2 diff
(99.6 %id)
CN350731 embryonic stem cells, cell lines H1, H7, andH9 .a 2264 to 2906 1 to 643       643/643
(100 %)
0 diff
(100 %id)
DA100512 cerebellum .a 2268 to 2846 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
BG913442 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2290 to 3001 1 to 712       712/719
(99 %)
3 diff
(99.6 %id)
BX283576 eye, normal pigmented retinal epithelium .a 2311 to 2804 1 to 494       494/494
(100 %)
0 diff
(100 %id)
BE796820 lung, small cell carcinoma .a 2320 to 2853 1 to 534       534/534
(100 %)
1 diff
(99.9 %id)
BF339885 brain, glioblastoma with EGFR amplification .a 2359 to 3011 29 to 691       663/1140
(58 %)
29 diff
(97.5 %id)
AA324945 brain, cerebellum .a 2375 to 2704 1 to 333       333/387
(86 %)
10 diff
(97.5 %id)
BE736908 adenocarcinoma, Pancreas .a 2408 to 3190 1 to 779       779/904
(86 %)
39 diff
(95.7 %id)
BG254523 adenocarcinoma, cell line, Prostate .a 2426 to 3233 1 to 802       802/984
(81 %)
28 diff
(97.2 %id)
BE933344 head_neck .a 2429 to 2591 162 to 1       162/162
(100 %)
7 diff
(95.7 %id)
AA310842   .a 2431 to 2777 1 to 349       349/349
(100 %)
2 diff
(99.5 %id)
BE799945 lung, small cell carcinoma .a 2458 to 3210 65 to 816       752/820
(91 %)
18 diff
(97.9 %id)
BF530450 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2462 to 3177 1 to 714       714/865
(82 %)
9 diff
(99.0 %id)
BG951410 colon .a 2463 to 2583 130 to 11       120/130
(92 %)
0 diff
(100 %id)
BQ668829 epidermoid carcinoma, cell line, salivary gland .a 2503 to 3276 2 to 776       775/900
(86 %)
18 diff
(98.0 %id)
BE735840 adenocarcinoma, Pancreas .a 2509 to 3280 1 to 759       759/929
(81 %)
29 diff
(96.9 %id)
T12578   .a 2585 to 2684 100 to 1       100/100
(100 %)
0 diff
(100 %id)
AI940337 colon .a 2629 to 2949 1 to 325       325/378
(85 %)
15 diff
(96.1 %id)
AI940378 colon .a 2629 to 2949 1 to 325       325/378
(85 %)
15 diff
(96.1 %id)
CB113600 brain .a 2669 to 2907 1 to 239       239/239
(100 %)
0 diff
(100 %id)
BG285621 bladder, transitional cell papilloma, cell line .a 2700 to 3487 1 to 783       783/784
(99 %)
9 diff
(98.9 %id)
BG541097 lung .a 2728 to 3398 1 to 663       663/871
(76 %)
23 diff
(97.4 %id)
D58578   .a 2733 to 3008 1 to 275       275/275
(100 %)
2 diff
(99.3 %id)
CK001477 brain/CNS, Bulk tissue from Human Spinal cord .a 2739 to 3369 1 to 631       631/631
(100 %)
4 diff
(99.4 %id)
AW905117 nervous_normal .a 2740 to 3089 14 to 363       350/363
(96 %)
7 diff
(98.1 %id)
BE794999 lung, small cell carcinoma .a 2808 to 3055 1 to 258       258/415
(62 %)
11 diff
(97.4 %id)
FN050509 breast carcinoma .a 2910 to 3000 91 to 1     Submitted on the opposite strand 91/92
(98 %)
0 diff
(100 %id)
H19201 whole brain .a 3669 to 4105 453 to 8   tiling clone,   446/456
(97 %)
0 diff
(100 %id)
BX479348   .a 3974 to 4105 1 to 132   tiling clone,   132/153
(86 %)
1 diff
(99.4 %id)
DR003030 fetal brain .b 1 to 439 1 to 443   tiling clone,   439/443
(99 %)
5 diff
(98.9 %id)
CD109519 Human Placenta, placenta .b 11 to 586 25 to 602       574/807
(71 %)
16 diff
(98.1 %id)
BC059362 Placenta, normal .b 14 to 3558 1 to 3545   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/23 A in genome downstream of last aligned base) 3545/3545
(100 %)
4 diff
(99.9 %id)
DR002306 fetal brain .b 31 to 610 8 to 587       576/587
(98 %)
6 diff
(99.0 %id)
BX461791 brain, fetal brain .b 41 to 1072 1 to 1022       1022/1041
(98 %)
12 diff
(98.9 %id)
DB480866 hippocampus .b 57 to 554 1 to 498       498/499
(99 %)
1 diff
(99.8 %id)
CF994134 Human Placenta, placenta .b 60 to 588 28 to 559       532/1126
(47 %)
16 diff
(98.6 %id)
BM147679 leukopheresis .b 74 to 384 1 to 315       311/315
(98 %)
11 diff
(96.6 %id)
BQ955043 sciatic nerve .b 80 to 843 1 to 763       763/944
(80 %)
2 diff
(99.8 %id)
BX461790 brain, fetal brain .b 2628 to 3592 993 to 34   tiling clone,   960/1083
(88 %)
20 diff
(98.2 %id)
DR001266 fetal brain .c 1 to 644 29 to 673   tiling clone,   641/673
(95 %)
6 diff
(99.2 %id)
BX354896 Neuroblastoma Cot 25-normalized .c 2 to 945 1 to 940       940/940
(100 %)
6 diff
(99.4 %id)
NM_006266.2   .c 55 to 3685 1 to 3631 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 3631/3631
(100 %)
0 diff
(100 %id)
AF295773 brain .c 64 to 3209 1 to 3146 exact tiling clone,   3146/3146
(100 %)
3 diff
(100.0 %id)
DA338573 hippocampus .c 132 to 717 2 to 588   tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
DA173582 amygdala .c 133 to 429 2 to 299   capped   298/298
(100 %)
1 diff
(99.7 %id)
DA328286 hippocampus .c 134 to 562 2 to 430   capped   429/433
(99 %)
2 diff
(99.6 %id)
DA235167 brain .c 233 to 825 2 to 595   capped   594/594
(100 %)
3 diff
(99.5 %id)
AK127524 thalamus .d 1 to 3690 2 to 3690 R3W L96F tiling clone, available from FLJ,   3690/3690
(100 %)
5 diff
(99.9 %id)
DA417418 thalamus .d 1 to 559 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA184041 amygdala .d 149 to 700 2 to 554   tiling clone, capped   553/553
(100 %)
1 diff
(99.9 %id)
DB312808 thalamus .d 3127 to 3690 563 to 1   tiling clone,   563/563
(100 %)
2 diff
(99.7 %id)
DC339956 thalamus .e 1 to 562 1 to 562   tiling clone,   562/562
(100 %)
1 diff
(99.9 %id)
DC340717 thalamus .e 28 to 580 1 to 553       553/553
(100 %)
0 diff
(100 %id)
AK301470 synovial membrane tissue from rheumatoidarthritis .e 41 to 2959 1 to 2919   tiling clone,   2919/2919
(100 %)
1 diff
(100.0 %id)
DC296075 synovial membrane tissue from rheumatioidarthritis .e 41 to 571 1 to 531       531/539
(98 %)
0 diff
(100 %id)
DC296433 synovial membrane tissue from rheumatioidarthritis .e 41 to 592 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC391982 Spleen .e 111 to 654 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
BQ217554 epithelioid carcinoma, Pancreas .f 1 to 747 1 to 763   tiling clone,   763/907
(84 %)
14 diff
(98.5 %id)
CF994906 Human Placenta, placenta .f 7 to 560 27 to 582       556/923
(60 %)
25 diff
(97.3 %id)
BY797688 eye .f 14 to 520 1 to 507   tiling clone,   507/507
(100 %)
2 diff
(99.7 %id)
CR984074 T-Lymphocytes .f 15 to 338 1 to 324       324/326
(99 %)
2 diff
(99.4 %id)
NM_001042368.1   .f 16 to 3683 1 to 3668 exact RefSeq,   3668/3668
(100 %)
0 diff
(100 %id)
DB480328 hippocampus .f 19 to 512 1 to 498       498/498
(100 %)
7 diff
(98.6 %id)
BU902406 leiomyosarcoma, uterus .f 56 to 638 1 to 588       587/956
(61 %)
18 diff
(98.2 %id)
AF027169   .f 81 to 3683 1 to 3603 exact tiling clone,   3603/3603
(100 %)
2 diff
(100.0 %id)
DA804546 brain .f 155 to 710 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BG326520 Kidney, renal cell adenocarcinoma .f 238 to 962 6 to 719       714/929
(76 %)
20 diff
(97.9 %id)
AK056462   .f 299 to 3573 1 to 3275   available from FLJ,   3275/3275
(100 %)
9 diff
(99.8 %id)
DA741407   .f 300 to 802 2 to 504   capped   503/503
(100 %)
1 diff
(99.9 %id)
DA572663 whole embryo, mainly body .f 345 to 1115 2 to 771   capped   770/770
(100 %)
15 diff
(98.1 %id)
AK000242 colon mucosa .f 1019 to 3682 1 to 2664   available from FLJ, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 2664/2664
(100 %)
7 diff
(99.8 %id)
DA733738   .f 1140 to 1634 2 to 497   capped   496/498
(99 %)
6 diff
(98.8 %id)
AK024575 adipose tissue .f 1517 to 3566 96 to 2145   available from FLJ, AAA Possibly primed on the genome, locally A rich (20/23 A in genome downstream of last aligned base) 2050/2145
(95 %)
9 diff
(99.6 %id)
BC033198 Primary B-Cells from Tonsils .f 1580 to 3682 1 to 2103   available from MGC, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 2103/2103
(100 %)
2 diff
(100.0 %id)
BE799631 lung, small cell carcinoma .f 1880 to 2727 12 to 857       846/1015
(83 %)
20 diff
(98.1 %id)
BG752913 eye, normal pigmented retinal epithelium .f 1889 to 2797 1 to 904       904/908
(99 %)
14 diff
(98.5 %id)
BG686470 B-cells, primary B-cells from tonsils (cell line) .f 1899 to 2689 1 to 789       789/789
(100 %)
4 diff
(99.5 %id)
BG755065 B-cells, primary B-cells from tonsils (cell line) .f 1899 to 2785 1 to 884       884/1003
(88 %)
19 diff
(98.2 %id)
BG755387 B-cells, primary B-cells from tonsils (cell line) .f 1899 to 2651 1 to 756   available from MGC,   756/759
(99 %)
10 diff
(98.7 %id)
BC021581 Primary B-Cells from Tonsils .f 1900 to 3566 1 to 1667   available from MGC, AAA Possibly primed on the genome, locally A rich (20/23 A in genome downstream of last aligned base) 1667/1667
(100 %)
2 diff
(99.9 %id)
BU186258 embryonal carcinoma, cell line, testis .f 1908 to 2813 1 to 916       916/919
(99 %)
40 diff
(95.7 %id)
DA056878 cerebellum .f 2119 to 2731 2 to 615   capped   614/614
(100 %)
5 diff
(99.2 %id)
BF340433 brain, glioblastoma with EGFR amplification .f 2132 to 2799 13 to 681       669/681
(98 %)
8 diff
(98.9 %id)
CX869713 embryonic stem .f 2156 to 2814 1 to 659     Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 659/659
(100 %)
1 diff
(99.9 %id)
AW806513 stomach .f 2164 to 2674 12 to 523       512/523
(97 %)
12 diff
(97.8 %id)
BM741401 Ascites, stomach .f 2188 to 2802 1 to 615       615/615
(100 %)
0 diff
(100 %id)
BM741447 Ascites, stomach .f 2188 to 2799 1 to 612       612/612
(100 %)
0 diff
(100 %id)
BM745178 Ascites, stomach .f 2188 to 2762 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BM747976 Ascites, stomach .f 2188 to 2683 1 to 496       496/496
(100 %)
0 diff
(100 %id)
BM744414 Ascites, stomach .f 2188 to 2785 1 to 599       599/599
(100 %)
1 diff
(99.9 %id)
BM756793 Ascites, stomach .f 2188 to 2725 1 to 538       538/538
(100 %)
0 diff
(100 %id)
BM770647 Ascites, stomach .f 2188 to 2864 1 to 677       677/677
(100 %)
0 diff
(100 %id)
BG117733 adenocarcinoma, cell line, Liver .f 2209 to 2954 1 to 732       732/840
(87 %)
22 diff
(97.4 %id)
CD108650 brain, Pituitary .f 2220 to 3043 1 to 835       835/861
(96 %)
14 diff
(98.4 %id)
F06992 brain, total brain .f 2268 to 2597 1 to 329       329/329
(100 %)
1 diff
(99.7 %id)
R34655 whole brain .f 2281 to 2600 7 to 334       329/393
(83 %)
14 diff
(96.5 %id)
AW806516 stomach .f 2338 to 2890 1 to 548       548/548
(100 %)
13 diff
(97.7 %id)
AI909807 breast .f 2347 to 2694 1 to 349       349/351
(99 %)
8 diff
(97.8 %id)
BF847073 lung_normal .f 2369 to 2658 295 to 5     Submitted on the opposite strand 291/296
(98 %)
3 diff
(99.0 %id)
BG287470 bladder, transitional cell papilloma, cell line .f 2406 to 3198 1 to 815       815/1141
(71 %)
16 diff
(98.6 %id)
BM805052 ovary (pool of 3) .f 2411 to 3371 1 to 964   tiling clone,   964/1054
(91 %)
10 diff
(99.1 %id)
AI795815 head_neck .f 2430 to 2960 1 to 531       531/534
(99 %)
6 diff
(98.9 %id)
CN297071 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 2438 to 3181 1 to 744       744/744
(100 %)
2 diff
(99.8 %id)
AW806659 stomach .f 2452 to 2949 498 to 1       498/498
(100 %)
3 diff
(99.4 %id)
AA357950 lung .f 2462 to 2646 1 to 184       184/184
(100 %)
1 diff
(99.5 %id)
AA319725 adrenal gland .f 2479 to 2794 1 to 315       315/315
(100 %)
4 diff
(98.8 %id)
BG696183 skin .f 2493 to 3098 1 to 605       605/605
(100 %)
3 diff
(99.6 %id)
BG924905 cartilage .f 2502 to 2985 109 to 592       484/513
(94 %)
7 diff
(98.7 %id)
CX869636 embryonic stem .f 3036 to 3680 680 to 36   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 645/645
(100 %)
14 diff
(97.9 %id)
DB365721   .f 3036 to 3573 540 to 1       540/562
(96 %)
12 diff
(97.9 %id)
DB324724   .f 3044 to 3573 530 to 1       530/530
(100 %)
1 diff
(99.9 %id)
DB359735 whole embryo, mainly body .f 3127 to 3682 555 to 1       555/562
(98 %)
12 diff
(97.9 %id)
R49185 whole brain .f 3247 to 3578 339 to 5       335/377
(88 %)
0 diff
(100 %id)
F03268 brain, total brain .f 3291 to 3566 276 to 1       276/276
(100 %)
0 diff
(100 %id)
AK074114 Spleen .g 1 to 4599 1 to 4601 exact tiling clone, available from FLJ,   4601/4601
(100 %)
8 diff
(99.9 %id)
DA232341 brain .g 56 to 605 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA123671 cerebellum .g 57 to 587 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
CD107640 brain, Pituitary .g 2108 to 2952 1 to 849   tiling clone,   849/849
(100 %)
10 diff
(98.9 %id)
AL707897 human skeletal muscle .g 2700 to 3231 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
DA116158 cerebellum .g 2772 to 3360 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
BG483481 lung .g 2785 to 3364 1 to 584       584/731
(79 %)
7 diff
(99.1 %id)
DA192290 amygdala .g 2870 to 3418 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
AA313061 Pancreas .g 3091 to 3385 1 to 296       296/297
(99 %)
3 diff
(99.0 %id)
DA064535 cerebellum .g 3243 to 3797 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
BI770250 pooled lung and spleen .g 3375 to 4186 1 to 814   tiling clone,   814/815
(99 %)
7 diff
(99.2 %id)
TI_57180121   .g 3375 to 4186 30 to 843       814/844
(96 %)
15 diff
(98.3 %id)
BM511331 insulinoma, Pancreas .g 3382 to 3919 8 to 545   tiling clone, Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 538/545
(98 %)
11 diff
(98.0 %id)
BM510501 insulinoma, Pancreas .g 3954 to 4492 554 to 16   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 539/539
(100 %)
1 diff
(99.9 %id)
DA244754 brain .h 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DB306069 brain .h 3365 to 3884 524 to 5   tiling clone,   520/524
(99 %)
0 diff
(100 %id)
BX394761 Neuroblastoma Cot 25-normalized .i 1 to 886 1 to 884   tiling clone,   884/884
(100 %)
24 diff
(97.3 %id)
BX353570 Neuroblastoma Cot 25-normalized .i 6 to 1048 1 to 1041   tiling clone,   1041/1057
(98 %)
18 diff
(98.3 %id)
BX458930 placenta .i 6 to 1100 1 to 1091   tiling clone,   1091/1091
(100 %)
13 diff
(98.9 %id)
DA725562   .i 203 to 768 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BE152480 head_neck .i 288 to 596 34 to 342       309/342
(90 %)
11 diff
(96.8 %id)
DA126184 cerebellum .i 358 to 945 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
BG986826 head_neck .i 482 to 881 409 to 11       399/409
(97 %)
0 diff
(100 %id)
BI199530 brain, neuroblastoma .i 1095 to 1784 1 to 689   tiling clone,   746/938
(79 %)
14 diff
(98.6 %id)
CA397865 eye, RPE/choroid .j 1 to 579 1 to 579   tiling clone,   579/579
(100 %)
0 diff
(100 %id)
DA835292 placenta .j 16 to 553 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
AK291498   .j 32 to 1531 1 to 1500 exact     1500/1500
(100 %)
0 diff
(100 %id)
AK314097 adrenal gland .j 32 to 1356 1 to 1325 L20F     1325/1325
(100 %)
3 diff
(99.8 %id)
BP225737   .j 32 to 537 1 to 506       506/508
(99 %)
3 diff
(99.5 %id)
BP283630 bone marrow .j 32 to 613 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
NM_021996.4   .j 32 to 1980 1 to 1949 exact RefSeq,   1949/1949
(100 %)
0 diff
(100 %id)
DA017773 adrenal gland .j 33 to 515 2 to 484   capped   483/483
(100 %)
3 diff
(99.4 %id)
DA282412 corpus callosum .j 33 to 587 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA377915 thalamus .j 33 to 667 2 to 636   capped   635/635
(100 %)
2 diff
(99.7 %id)
DA426808 colon .j 33 to 513 2 to 482   capped   481/481
(100 %)
2 diff
(99.6 %id)
DA464438   .j 33 to 583 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA464545   .j 33 to 595 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA467406 cord Blood .j 33 to 583 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA814420   .j 33 to 583 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA848100 placenta .j 33 to 608 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA884682   .j 33 to 596 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA893239 skeletal muscle .j 33 to 525 2 to 494   capped   493/493
(100 %)
1 diff
(99.8 %id)
DA932931 Spleen .j 33 to 587 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA971456 synovial membrane tissue from rheumatioidarthritis .j 33 to 566 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DA972705 synovial membrane tissue from rheumatioidarthritis .j 33 to 592 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA974421 synovial membrane tissue from rheumatioidarthritis .j 33 to 596 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BP284307 bone marrow .j 34 to 615 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA482062   .j 35 to 597 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA820105   .j 35 to 583 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BP215877 corpus callosum .j 37 to 615 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
TI_57163632   .j 45 to 673 32 to 664       631/668
(94 %)
12 diff
(98.3 %id)
CD631021   .j 48 to 673 1 to 628       628/644
(97 %)
12 diff
(98.2 %id)
AL525920 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .j 48 to 1000 1 to 950   fully sequenced,   950/950
(100 %)
7 diff
(99.3 %id)
BC032499 Pancreas, Spleen, adult pooled .j 49 to 1978 1 to 1930 L20F tiling clone, available from MGC, AAA   1930/1930
(100 %)
3 diff
(99.9 %id)
BI836077 pooled pancreas and spleen .j 49 to 673 1 to 629       627/633
(99 %)
11 diff
(98.3 %id)
AY358175   .j 52 to 1978 1 to 1927 L20F tiling clone, AAA   1927/1927
(100 %)
2 diff
(99.9 %id)
CD631019   .j 56 to 691 1 to 639       641/639
(100 %)
11 diff
(98.3 %id)
BM923163 leukocyte .j 59 to 847 1 to 809       809/1127
(71 %)
59 diff
(94.8 %id)
CD631022   .j 104 to 923 818 to 1       818/818
(100 %)
15 diff
(98.2 %id)
CD631020   .j 121 to 924 805 to 1       805/806
(99 %)
20 diff
(97.6 %id)
BG025899 Bone, osteosarcoma, cell line .j 314 to 1063 1 to 748       748/891
(83 %)
15 diff
(98.4 %id)
BI858477 breast, mammary adenocarcinoma, cell line .j 409 to 1068 1 to 659       659/664
(99 %)
11 diff
(98.4 %id)
TI_57193627   .j 409 to 1068 49 to 707       659/664
(99 %)
11 diff
(98.4 %id)
CN309752 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j 546 to 1165 1 to 620       620/620
(100 %)
0 diff
(100 %id)
AL562632 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .j 970 to 1950 980 to 1   fully sequenced,   980/980
(100 %)
43 diff
(95.7 %id)
GD149082   .j 1828 to 1978 14 to 164   AAA   151/164
(92 %)
6 diff
(96.4 %id)
AK303825 lung, tumor tissue .k 1 to 1448 2 to 1449 exact tiling clone,   1449/1449
(100 %)
0 diff
(100 %id)
DC413499 lung, tumor tissue .k 1 to 580 2 to 581       581/581
(100 %)
0 diff
(100 %id)
BX389796 Placenta Cot 25-normalized .k 658 to 1562 1 to 900       900/900
(100 %)
33 diff
(96.4 %id)
CR992638 T-Lymphocytes .k 905 to 1546 1 to 642       642/645
(99 %)
3 diff
(99.6 %id)
AL576804 placenta, Placenta Cot 25-normalized .k 959 to 1867 904 to 1   tiling clone,   904/923
(97 %)
17 diff
(98.2 %id)
BX387712 Placenta Cot 25-normalized .k 967 to 1873 909 to 1       909/994
(91 %)
17 diff
(98.3 %id)
BF843446 head_neck .k 1073 to 1274 209 to 10     Submitted on the opposite strand 200/209
(95 %)
0 diff
(100 %id)
BF985126 placenta_normal .k 1267 to 1579 337 to 26       312/338
(92 %)
0 diff
(100 %id)
AA827370 Kidney, kidney tumor .k 1284 to 1658 375 to 1       375/375
(100 %)
0 diff
(100 %id)
AI732896 Kidney, kidney tumor .k 1284 to 1649 375 to 10       366/375
(97 %)
0 diff
(100 %id)
AA827371 Kidney, kidney tumor .k 1284 to 1660 377 to 1       377/377
(100 %)
0 diff
(100 %id)
AI769892 2 pooled tumors (clear cell type), Kidney .k 1437 to 1663 255 to 29   AAA   227/238
(95 %)
14 diff
(94.2 %id)
BX097786 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .k 1475 to 1895 435 to 15   AAA   421/421
(100 %)
1 diff
(99.8 %id)
AI627912 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .k 1491 to 1897 409 to 3   tiling clone,   407/409
(99 %)
0 diff
(100 %id)
AI263114 Kidney .k 1496 to 1897 403 to 2       402/403
(99 %)
0 diff
(100 %id)
AW612392 Kidney .k 1541 to 1897 359 to 2       358/359
(99 %)
9 diff
(97.5 %id)
DB215279 trachea .l 1 to 537 2 to 539   tiling clone, capped   538/538
(100 %)
2 diff
(99.7 %id)
DA238916 brain .l 23 to 615 2 to 594   tiling clone, capped   593/593
(100 %)
0 diff
(100 %id)
BM919894 pooled pancreas and spleen .l 612 to 1620 1 to 1022   tiling clone,   1022/1029
(99 %)
17 diff
(98.4 %id)
BP293080 lung .l 1485 to 2056 1 to 572   tiling clone,   572/583
(98 %)
1 diff
(99.9 %id)
AK074639 whole embryo, mainly body .m 1 to 1926 1 to 1926 L20F tiling clone, available from FLJ,   1926/1926
(100 %)
4 diff
(99.8 %id)
DA573087 whole embryo, mainly body .m 2 to 780 2 to 783   capped   782/783
(99 %)
7 diff
(99.2 %id)
DB360231 whole embryo, mainly body .m 1394 to 1926 531 to 1       531/531
(100 %)
10 diff
(98.2 %id)
DB215986 trachea .n 1 to 535 2 to 536 T95A tiling clone, capped   535/535
(100 %)
1 diff
(99.9 %id)
TI_57231535   .o 1 to 864 25 to 877 L15V A16G T18H S19K L20P ...     853/908
(93 %)
31 diff
(96.6 %id)
BI906086 leukocyte .o 7 to 864 1 to 847 L15V A16G T18H S19K L20P ...     847/878
(96 %)
27 diff
(97.0 %id)
CR622726 Placenta Cot 25-normalized .o 15 to 1945 1 to 1931 exact tiling clone,   1931/1931
(100 %)
0 diff
(100 %id)
AL553919 placenta, Placenta Cot 25-normalized .o 15 to 848 1 to 835 S19X L20X L23X N29X P32X ...     835/886
(94 %)
23 diff
(97.5 %id)
AK307687 thymus .p 1 to 1511 2 to 1512 exact tiling clone,   1512/1512
(100 %)
1 diff
(100.0 %id)
DB114378 thymus .p 1 to 562 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BG178670 adenocarcinoma, cell line, Prostate .q 1 to 697 1 to 701 exact tiling clone,   701/1131
(61 %)
11 diff
(99.1 %id)
T12586   .q 541 to 757 1 to 217   tiling clone,   217/217
(100 %)
0 diff
(100 %id)
DB226174 trachea .r 1 to 593 2 to 594 exact tiling clone, capped   593/593
(100 %)
0 diff
(100 %id)
DA109282 cerebellum .s 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
AF163572   .t 1 to 2351 83 to 2433 exact tiling clone,   2351/2433
(96 %)
26 diff
(99.0 %id)
BX477983   .u-u 44 to 524 1 to 482   tiling clone,   482/482
(100 %)
1 diff
(99.8 %id)
DA138341 alzheimer cortex .u-u 52 to 597 2 to 547   tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
BQ893047 dorsal root ganglia .u-u 54 to 715 131 to 809       679/1308
(51 %)
6 diff
(99.6 %id)
DB101620 thymus .u-u 74 to 609 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BE928120 colon .u-u 114 to 511 1 to 398       398/402
(99 %)
19 diff
(95.3 %id)
CX870922 embryonic stem .u-u 122 to 807 1 to 687       687/687
(100 %)
5 diff
(99.3 %id)
R34523.
matches multiple genes
whole brain .u-u 147 to 500 1 to 357     also hits gene NIPSNAP3AandNIPSNAP3B 357/454
(78 %)
6 diff
(98.7 %id)
BM927290 brain .u-u 251 to 1068 1 to 826   tiling clone,   826/1083
(76 %)
25 diff
(97.7 %id)
BQ345747 nervous_tumor .u-u 570 to 942 403 to 24       380/419
(90 %)
19 diff
(95.5 %id)
BQ346046 nervous_tumor .u-u 573 to 957 386 to 4       383/386
(99 %)
0 diff
(100 %id)
R21586 whole brain .u-u 630 to 1028 1 to 404       404/420
(96 %)
12 diff
(97.2 %id)
CA454897   .u-u 639 to 1494 1 to 869       869/882
(98 %)
16 diff
(98.2 %id)
BQ345689 nervous_tumor .u-u 721 to 1201 3 to 482       480/482
(99 %)
6 diff
(98.8 %id)
H03636 placenta .u-u 754 to 1048 1 to 295       295/331
(89 %)
12 diff
(96.4 %id)
BF827911 head_normal .u-u 770 to 1164 405 to 11     Submitted on the opposite strand 395/405
(97 %)
0 diff
(100 %id)
AA319821 adrenal gland .u-u 831 to 976 1 to 146       146/146
(100 %)
2 diff
(98.7 %id)
CU445189 epidermis .u-u 857 to 1429 593 to 21     Submitted on the opposite strand 573/602
(95 %)
0 diff
(100 %id)
BE744159 adenocarcinoma cell line, ovary .u-u 862 to 1675 1 to 806 A69D P70Q K71R I72F P73H ...     806/845
(95 %)
13 diff
(98.5 %id)
BU784116 insulinoma, Pancreas .u-u 864 to 1284 1 to 421   fully sequenced,   421/421
(100 %)
6 diff
(98.6 %id)
AA318860 adrenal gland .u-u 886 to 1221 1 to 339   tiling clone,   339/341
(99 %)
7 diff
(98.0 %id)
BE140381 head_neck .u-u 900 to 1154 261 to 7     Submitted on the opposite strand 255/261
(97 %)
0 diff
(100 %id)
BQ956403 sciatic nerve .u-u 915 to 1760 1 to 853 S80R V83G S90T L100P F101L ...     853/949
(89 %)
23 diff
(97.6 %id)
AA557656 Prostate, prostatic intraepithelial neoplasia - highgrade .u-u 918 to 1270 1 to 350       350/350
(100 %)
10 diff
(97.2 %id)
AW959257   .u-u 920 to 1353 1 to 435       435/435
(100 %)
10 diff
(97.8 %id)
AA327450 colon .u-u 927 to 1228 1 to 302       302/302
(100 %)
3 diff
(99.1 %id)
W07596 lung .u-u 930 to 1451 8 to 516       509/516
(98 %)
5 diff
(99.1 %id)
BM918064 blood, natural killer cells, cell line .u-u 934 to 1485 12 to 563       552/1203
(45 %)
6 diff
(99.6 %id)
T29712 synovial membrane .u-u 947 to 1241 1 to 297       297/297
(100 %)
2 diff
(99.4 %id)
AW951513   .u-u 948 to 1548 1 to 599       599/600
(99 %)
16 diff
(97.4 %id)
BU164210 large cell carcinoma, lung .u-u 960 to 1651 1 to 697 S84F T86P S90N A95S E96R ...     697/902
(77 %)
17 diff
(98.2 %id)
BE048028 brain, tumor, 5 pooled (see description) .u-u 974 to 1465 1 to 492       492/492
(100 %)
0 diff
(100 %id)
BG288057 bladder, transitional cell papilloma, cell line .u-u 980 to 1655 1 to 675 A87V Y88T S90A P91L L93W ...     675/949
(71 %)
15 diff
(98.5 %id)
BM846086 myeloma .u-u 1009 to 1437 1 to 428       428/428
(100 %)
3 diff
(99.3 %id)
BI851013 embryonal carcinoma, cell line, testis .u-u 1015 to 1683 1 to 668 Q21R V22C W23G V24S T25L ...     668/668
(100 %)
1 diff
(99.9 %id)
BI006446 kidney_tumor .u-u 1024 to 1275 43 to 295       253/295
(85 %)
6 diff
(98.0 %id)
TI_159723579   .u-u 1028 to 1896 948 to 84 S63X AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 865/982
(88 %)
13 diff
(98.7 %id)
CK004517 brain/CNS, Human Brain - Frontal Cortex .u-u 1043 to 1740 1 to 695 exact tiling clone,   695/695
(100 %)
8 diff
(98.9 %id)
BM846544 myeloma .u-u 1051 to 1438 1 to 388       388/388
(100 %)
0 diff
(100 %id)
BX474068   .u-u 1064 to 1637 8 to 590       583/590
(98 %)
10 diff
(98.4 %id)
TI_151714764   .u-u 1067 to 1810 859 to 109 A2G W3H C4G P5M A6V ...     751/1040
(72 %)
0 diff
(100 %id)
CA778266 Pancreas, Purified pancreatic islet .u-u 1086 to 1585 1 to 502   fully sequenced,   502/502
(100 %)
8 diff
(98.5 %id)
CR736630   .u-u 1098 to 1789 707 to 15 exact AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 693/693
(100 %)
1 diff
(99.9 %id)
BE735588 adenocarcinoma, Pancreas .u-u 1110 to 1841 1 to 724 G56V G58A P59L S60P H61P ... AAA   724/770
(94 %)
14 diff
(98.2 %id)
AW997810 breast_normal .u-u 1128 to 1310 185 to 2     Submitted on the opposite strand 184/185
(99 %)
0 diff
(100 %id)
BF848050 lung_normal .u-u 1128 to 1452 7 to 332       326/332
(98 %)
6 diff
(98.2 %id)
BQ017082 lung, Metastatic Chondrosarcoma .u-u 1128 to 1782 671 to 17 exact AAA Possibly primed on the genome, locally A rich (20/23 A in genome downstream of last aligned base) 655/655
(100 %)
1 diff
(99.9 %id)
BQ446546 Knee, Osteoarthritic Cartilage .u-u 1128 to 1782 671 to 17 S63X AAA Possibly primed on the genome, locally A rich (20/23 A in genome downstream of last aligned base) 655/655
(100 %)
1 diff
(99.9 %id)
BE772850 prostate_tumor .u-u 1162 to 1590 15 to 443       429/448
(95 %)
5 diff
(98.9 %id)
BE220594 carcinoid, lung .u-u 1175 to 1404 240 to 11       230/240
(95 %)
0 diff
(100 %id)
TI_154026341   .u-u 1187 to 1896 795 to 87 R55M AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 709/709
(100 %)
8 diff
(98.9 %id)
CA945117 Human Lung Epithelial cells, lung .u-u 1188 to 1896 727 to 19 S63X AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 709/709
(100 %)
2 diff
(99.8 %id)
BI017067 lung_tumor .u-u 1190 to 1429 251 to 10       242/257
(94 %)
0 diff
(100 %id)
BF848110 lung_normal .u-u 1195 to 1634 11 to 450       440/451
(97 %)
2 diff
(99.6 %id)
AV703356 adrenal gland .u-u 1202 to 1799 1 to 596 exact     596/631
(94 %)
12 diff
(98.1 %id)
BG925898 cartilage .u-u 1203 to 1749 70 to 619 exact     550/556
(98 %)
6 diff
(99.0 %id)
AW360926 colon .u-u 1231 to 1727 1 to 494 C4V P12T S16F T18K P19T ...     494/501
(98 %)
15 diff
(97.1 %id)
BU783847 insulinoma, Pancreas .u-u 1254 to 1803 550 to 1 exact fully sequenced,   550/550
(100 %)
2 diff
(99.7 %id)
BQ025059 placenta .u-u 1254 to 1789 554 to 19 S63X AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 536/536
(100 %)
0 diff
(100 %id)
CA440180 lung, Metastatic Chondrosarcoma .u-u 1256 to 1896 659 to 19 R55M AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 641/641
(100 %)
2 diff
(99.7 %id)
BQ574376 Chondrosarcoma Grade II, Left Pelvis .u-u 1262 to 1896 651 to 19 T15N AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 633/633
(100 %)
4 diff
(99.4 %id)
N48917 multiple sclerosis lesions .u-u 1267 to 1602 1 to 335   fully sequenced,   335/335
(100 %)
9 diff
(97.4 %id)
BE222785 brain, oligodendroglioma .u-u 1267 to 1790 524 to 1 L17M     524/524
(100 %)
1 diff
(99.9 %id)
AI869315 anaplastic oligodendroglioma, brain .u-u 1268 to 1795 528 to 1 L93X     528/528
(100 %)
1 diff
(99.9 %id)
FN140381 breast carcinoma .u-u 1270 to 1321 1 to 52       52/52
(100 %)
0 diff
(100 %id)
AJ708906 heart .u-u 1273 to 1792 527 to 8 V109A   Submitted on the opposite strand 520/527
(98 %)
0 diff
(100 %id)
BX394760 Neuroblastoma Cot 25-normalized .u-u 1276 to 1882 619 to 6 A2M W3A C4X P5G A6X ...     614/993
(61 %)
0 diff
(100 %id)
AW131473 brain, medulloblastoma .u-u 1285 to 1787 505 to 3 P5X S63F A87V     503/505
(99 %)
0 diff
(100 %id)
BE543899 cervical carcinoma cell line, cervix .u-u 1288 to 1890 1 to 603 exact     603/603
(100 %)
2 diff
(99.7 %id)
BF847182 lung_normal .u-u 1293 to 1697 1 to 402 P5L A6L C7S R9G A10T ...     402/402
(100 %)
9 diff
(97.8 %id)
BP391104 pancreatic islet .u-u 1294 to 1792 1 to 500 exact   Submitted on the opposite strand 500/500
(100 %)
1 diff
(99.8 %id)
AW083177 colon, moderately differentiated adenocarcinoma .u-u 1296 to 1660 365 to 1 exact     365/365
(100 %)
0 diff
(100 %id)
AI683076 serous papillary carcinoma, high grade, 2pooled tumors, uterus .u-u 1299 to 1660 362 to 1 P8X     362/362
(100 %)
0 diff
(100 %id)
TI_57162780   .u-u 1306 to 1889 29 to 612       584/908
(64 %)
4 diff
(99.6 %id)
BI836349 pooled pancreas and spleen .u-u 1311 to 1889 1 to 579       579/875
(66 %)
2 diff
(99.8 %id)
AI817963 anaplastic oligodendroglioma, brain .u-u 1318 to 1783 493 to 1       493/493
(100 %)
30 diff
(94.0 %id)
AA554706 colon, tumor .u-u 1323 to 1789 466 to 1       466/466
(100 %)
5 diff
(99.0 %id)
AI951120 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .u-u 1323 to 1660 338 to 1       338/338
(100 %)
1 diff
(99.8 %id)
AW016275   .u-u 1323 to 1523 1 to 201     Submitted on the opposite strand 201/201
(100 %)
4 diff
(98.1 %id)
AI298506 carcinoid, lung .u-u 1340 to 1749 1 to 410     Submitted on the opposite strand 410/410
(100 %)
1 diff
(99.8 %id)
R32143 placenta .u-u 1342 to 1777 1 to 438   fully sequenced,   438/438
(100 %)
16 diff
(96.4 %id)
R62224 placenta .u-u 1342 to 1696 1 to 360       360/360
(100 %)
13 diff
(96.4 %id)
BQ023357 placenta .u-u 1342 to 1789 466 to 19   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 448/448
(100 %)
1 diff
(99.8 %id)
DB549078 hippocampus .u-u 1343 to 1789 1 to 446     Submitted on the opposite strand 446/446
(100 %)
5 diff
(98.9 %id)
AW131732 brain, medulloblastoma .u-u 1344 to 1794 456 to 5       452/456
(99 %)
0 diff
(100 %id)
BQ023419 placenta .u-u 1345 to 1805 463 to 4       460/481
(95 %)
0 diff
(100 %id)
DB549673 hippocampus .u-u 1348 to 1789 1 to 442     Submitted on the opposite strand 442/442
(100 %)
2 diff
(99.6 %id)
H03637 placenta .u-u 1348 to 1758 424 to 1       424/428
(99 %)
9 diff
(97.9 %id)
CA406878 adipose .u-u 1349 to 1880 532 to 1     Submitted on the opposite strand 532/532
(100 %)
0 diff
(100 %id)
AI874400 ovary, tumor, 5 pooled (see description) .u-u 1351 to 1660 310 to 1       310/310
(100 %)
0 diff
(100 %id)
AA827499 Kidney, kidney tumor .u-u 1368 to 1790 419 to 1       419/419
(100 %)
10 diff
(97.7 %id)
DB533590 hippocampus .u-u 1369 to 1789 1 to 420     Submitted on the opposite strand 420/420
(100 %)
27 diff
(93.6 %id)
AI702044 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .u-u 1369 to 1660 292 to 1       292/292
(100 %)
0 diff
(100 %id)
CR980528 T-Lymphocytes .u-u 1371 to 1765 1 to 397       397/397
(100 %)
2 diff
(99.5 %id)
AA348337 brain, hippocampus .u-u 1375 to 1637 1 to 262       262/262
(100 %)
3 diff
(98.9 %id)
AW961823   .u-u 1375 to 1761 1 to 387       387/514
(75 %)
7 diff
(98.7 %id)
AA132115   .u-u 1375 to 1789 418 to 1       418/423
(98 %)
4 diff
(99.1 %id)
AI279054 carcinoid, lung .u-u 1375 to 1751 7 to 384     Submitted on the opposite strand 378/384
(98 %)
7 diff
(98.2 %id)
N20886 melanocyte .u-u 1378 to 1782 417 to 1       417/473
(88 %)
17 diff
(96.5 %id)
AA996236 carcinoid, lung .u-u 1385 to 1789 406 to 1       406/406
(100 %)
6 diff
(98.6 %id)
AW085550 pooled .u-u 1391 to 1794 406 to 3       404/406
(99 %)
0 diff
(100 %id)
BE904977 epithelioid carcinoma, Pancreas .u-u 1391 to 1896 1 to 507   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 507/507
(100 %)
2 diff
(99.7 %id)
BF344590 brain, glioblastoma with EGFR amplification .u-u 1397 to 1896 1 to 499   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 499/499
(100 %)
3 diff
(99.4 %id)
AI421559 brain, glioblastoma (pooled) .u-u 1399 to 1896 498 to 1       498/498
(100 %)
0 diff
(100 %id)
AI539258 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .u-u 1400 to 1660 261 to 1       261/261
(100 %)
0 diff
(100 %id)
BP388487 pancreatic islet .u-u 1408 to 1899 1 to 492   tiling clone, Submitted on the opposite strand 492/495
(99 %)
1 diff
(99.8 %id)
AI864171 pooled .u-u 1411 to 1794 385 to 3       383/385
(99 %)
0 diff
(100 %id)
DB542044 hippocampus .u-u 1417 to 1895 1 to 479     Submitted on the opposite strand 479/480
(99 %)
1 diff
(99.8 %id)
AA031941 uterus .u-u 1417 to 1785 1 to 371     Submitted on the opposite strand 371/371
(100 %)
4 diff
(99.0 %id)
R33114 placenta .u-u 1418 to 1773 368 to 1       368/377
(97 %)
16 diff
(95.8 %id)
BQ023755 placenta .u-u 1419 to 1789 389 to 19   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 371/371
(100 %)
0 diff
(100 %id)
DB577218 hypothalamus .u-u 1421 to 1896 1 to 477     Submitted on the opposite strand 477/477
(100 %)
16 diff
(96.7 %id)
R32144 placenta .u-u 1422 to 1778 356 to 1   fully sequenced,   356/356
(100 %)
1 diff
(99.8 %id)
R49059.
matches multiple genes
whole brain .u-u 1424 to 1794 377 to 5     also hits gene NIPSNAP3AandNIPSNAP3B 373/399
(93 %)
0 diff
(100 %id)
BU753811 placenta .u-u 1425 to 1789 382 to 18   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 365/365
(100 %)
4 diff
(99.0 %id)
BF593805 brain, glioblastoma (pooled) .u-u 1428 to 1896 469 to 1       469/469
(100 %)
0 diff
(100 %id)
AI302680 carcinoid, lung .u-u 1430 to 1765 1 to 335     Submitted on the opposite strand 335/597
(56 %)
2 diff
(99.7 %id)
BQ023114 placenta .u-u 1430 to 1789 378 to 19   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 360/360
(100 %)
4 diff
(98.9 %id)
DB565033 hypothalamus .u-u 1437 to 1896 1 to 460     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
T32822 brain .u-u 1438 to 1789 354 to 1       354/354
(100 %)
2 diff
(99.5 %id)
BM705350 eye, RPE and Choroid .u-u 1439 to 1762 1 to 324       324/324
(100 %)
0 diff
(100 %id)
AI860630 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .u-u 1444 to 1899 458 to 4       455/459
(99 %)
0 diff
(100 %id)
AA902240 carcinoid, lung .u-u 1445 to 1788 343 to 1       343/343
(100 %)
3 diff
(99.2 %id)
BX333982 Neuroblastoma Cot 50-normalized .u-u 1448 to 1897 1 to 450       450/450
(100 %)
14 diff
(96.9 %id)
BP385282 pancreatic islet .u-u 1453 to 1723 1 to 270     Submitted on the opposite strand 270/271
(99 %)
4 diff
(98.6 %id)
BE328664 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .u-u 1456 to 1660 205 to 1       205/205
(100 %)
0 diff
(100 %id)
AI859194 anaplastic oligodendroglioma, brain .u-u 1457 to 1898 442 to 1       442/442
(100 %)
0 diff
(100 %id)
BF195558 fibrotheoma, ovary .u-u 1458 to 1897 445 to 5       441/445
(99 %)
0 diff
(100 %id)
BM699215 eye, fetal eyes .u-u 1459 to 1643 125 to 309   fully sequenced, Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 185/309
(59 %)
5 diff
(98.4 %id)
BM145330 leukopheresis .u-u 1460 to 1898 454 to 17   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 438/438
(100 %)
6 diff
(98.7 %id)
AI682910 adenocarcinoma, Pancreas .u-u 1462 to 1789 353 to 26   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 328/328
(100 %)
4 diff
(98.8 %id)
AA555053 colon, tumor .u-u 1465 to 1789 325 to 1       325/325
(100 %)
0 diff
(100 %id)
AA779596   .u-u 1465 to 1897 441 to 9       433/441
(98 %)
2 diff
(99.6 %id)
BE671636 pooled germ cell tumors .u-u 1466 to 1899 435 to 2       434/435
(99 %)
0 diff
(100 %id)
BE671642 pooled germ cell tumors .u-u 1466 to 1899 435 to 2       434/435
(99 %)
0 diff
(100 %id)
BQ023105 placenta .u-u 1476 to 1789 332 to 19   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 314/321
(97 %)
2 diff
(99.4 %id)
M79142   .u-u 1483 to 1881 399 to 1       399/399
(100 %)
0 diff
(100 %id)
BP389577 pancreatic islet .u-u 1484 to 1786 1 to 303     Submitted on the opposite strand 303/303
(100 %)
0 diff
(100 %id)
AI540261 lymph node, lymphoma, follicular mixed small and largecell .u-u 1490 to 1660 171 to 1       171/171
(100 %)
0 diff
(100 %id)
BF432516 pooled .u-u 1507 to 1794 290 to 3       288/290
(99 %)
0 diff
(100 %id)
AI810869 Prostate .u-u 1528 to 1896 369 to 1       369/369
(100 %)
0 diff
(100 %id)
AA904255 carcinoid, lung .u-u 1529 to 1788 260 to 1       260/260
(100 %)
1 diff
(99.7 %id)
AV655438 corresponding non cancerous liver tissue .u-u 1541 to 1896 1 to 356   AAA Submitted on the opposite strand 356/356
(100 %)
10 diff
(97.2 %id)
AI962093 adenocarcinoma, Pancreas .u-u 1542 to 1660 120 to 1       120/120
(100 %)
1 diff
(99.2 %id)
CA777983 Pancreas, Purified pancreatic islet .u-u 1555 to 1894 341 to 1   fully sequenced,   341/341
(100 %)
8 diff
(97.7 %id)
N46415 multiple sclerosis lesions .u-u 1572 to 1897 329 to 1   fully sequenced,   329/329
(100 %)
2 diff
(99.4 %id)
BE502039 pooled germ cell tumors .u-u 1576 to 1898 323 to 1       323/323
(100 %)
0 diff
(100 %id)
BI769539 pooled lung and spleen .u-u 1584 to 1896 1 to 314   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 314/314
(100 %)
1 diff
(99.7 %id)
TI_57179313   .u-u 1584 to 1896 69 to 382   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 314/382
(82 %)
10 diff
(97.4 %id)
BG818797 anaplastic oligodendroglioma with 1p/19qloss, brain .u-u 1586 to 1896 1 to 311   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 311/311
(100 %)
1 diff
(99.7 %id)
AW020184 cochlea, ear .u-u 1593 to 1894 1 to 301   fully sequenced, Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 301/301
(100 %)
6 diff
(98.1 %id)
CD107014 brain, Pituitary .u-u 1595 to 1896 1 to 302   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 302/302
(100 %)
0 diff
(100 %id)
BE242543 leukopheresis .u-u 1598 to 1895 298 to 1       298/298
(100 %)
3 diff
(99.0 %id)
AI913289 Kidney .u-u 1606 to 1895 290 to 1       290/290
(100 %)
0 diff
(100 %id)
AI935791 Kidney .u-u 1606 to 1896 291 to 1       291/291
(100 %)
0 diff
(100 %id)
BM669876 eye, fetal eyes .u-u 1613 to 1896 302 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 284/284
(100 %)
2 diff
(99.3 %id)
CA311028 Human Lung Epithelial cells, lung .u-u 1616 to 1896 311 to 31   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 281/283
(99 %)
0 diff
(100 %id)
DB530497 hippocampus .u-u 1621 to 1779 6 to 183     Submitted on the opposite strand 178/183
(97 %)
56 diff
(69.4 %id)
AI419183 brain, glioblastoma (pooled) .u-u 1627 to 1896 270 to 1       270/270
(100 %)
0 diff
(100 %id)
AI948650 anaplastic oligodendroglioma, brain .u-u 1628 to 1899 276 to 5       272/276
(98 %)
0 diff
(100 %id)
BI491221 cochlea, ear .u-u 1638 to 1898 292 to 32   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 261/261
(100 %)
0 diff
(100 %id)
BF739937 Kidney .u-u 1640 to 1899 260 to 1       260/260
(100 %)
0 diff
(100 %id)
AA985516 Kidney, kidney tumor .u-u 1644 to 1789 146 to 1       146/146
(100 %)
0 diff
(100 %id)
AI356503 B-cell, chronic lymphotic leukemia .u-u 1671 to 1891 259 to 39   AAA   221/228
(96 %)
0 diff
(100 %id)
AI636387 adenocarcinoma, Pancreas .u-u 1674 to 1899 228 to 3       226/228
(99 %)
0 diff
(100 %id)
AW166586 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .u-u 1674 to 1897 225 to 2       224/225
(99 %)
0 diff
(100 %id)
AW515881 lymph node, lymphoma, follicular mixed small and largecell .u-u 1674 to 1897 226 to 3       224/226
(99 %)
0 diff
(100 %id)
BG058342 dorsal root ganglia .u-u 1674 to 1791 118 to 1       118/118
(100 %)
0 diff
(100 %id)
BE885116 leiomyosarcoma, uterus .u-u 1693 to 1784 1 to 92       92/92
(100 %)
0 diff
(100 %id)
DR977591 brain .u-u 1715 to 1789 1 to 74   AAA Submitted on the opposite strand 74/74
(100 %)
5 diff
(93.3 %id)
N78707 lung .u-u 1717 to 1898 182 to 1       182/182
(100 %)
0 diff
(100 %id)
DR977681 brain .u-u 1720 to 1789 7 to 75   AAA Submitted on the opposite strand 69/75
(92 %)
6 diff
(92.0 %id)
GD155481   .u-u 1724 to 1789 10 to 75   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 66/75
(88 %)
6 diff
(92.0 %id)
AL118620 amygdala .u-u 1728 to 1896 1 to 170   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 170/170
(100 %)
1 diff
(99.5 %id)
AW169409 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .u-u 1752 to 1896 145 to 1       145/150
(96 %)
2 diff
(98.7 %id)
BU781899 insulinoma, Pancreas .u-u 1797 to 1897 126 to 26     Submitted on the opposite strand 101/126
(80 %)
0 diff
(100 %id)
DB241225 trachea .vb 1 to 491 2 to 492   tiling clone, capped   491/499
(98 %)
0 diff
(100 %id)
CR748158 germinal center B cell .vb 254 to 783 1 to 531   tiling clone,   531/531
(100 %)
2 diff
(99.7 %id)
CB265317 adipose .vb 657 to 978 1 to 321   tiling clone,   321/321
(100 %)
2 diff
(99.4 %id)
AA806560 germinal center B cell .vb 768 to 1207 440 to 1       440/440
(100 %)
1 diff
(99.8 %id)
AA805261 germinal center B cell .vb 824 to 1181 358 to 1       358/358
(100 %)
1 diff
(99.8 %id)
AI222969 pooled .vb 875 to 1253 382 to 4   tiling clone,   379/382
(99 %)
0 diff
(100 %id)
AA504839 germinal center B cell .vb 1078 to 1207 129 to 1       129/129
(100 %)
1 diff
(99.3 %id)
DC298163 adrenal gland .vc 1 to 546 1 to 546 exact tiling clone,   546/546
(100 %)
7 diff
(98.8 %id)
CF993809 Human Placenta, placenta .vd 1 to 705 29 to 737 W28L tiling clone,   710/848
(83 %)
15 diff
(98.3 %id)
BQ574549 Chondrosarcoma Grade II, Left Pelvis .vd 13 to 639 645 to 19 Q27R L31X tiling clone, AAA   627/639
(98 %)
6 diff
(99.1 %id)
BC040737 Brain, hippocampus .ve 1 to 1553 1 to 1553 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 1553/1553
(100 %)
2 diff
(99.9 %id)
BM545243 brain, hippocampus .ve 2 to 1029 1 to 1043 exact available from MGC,   1043/1072
(97 %)
54 diff
(95.0 %id)
BG012147 placenta_normal .ve 76 to 539 465 to 2       464/465
(99 %)
1 diff
(99.8 %id)
BI010584 lung_normal .ve 76 to 539 465 to 2       464/465
(99 %)
1 diff
(99.8 %id)
AA348452 brain, hippocampus .vf 1 to 253 1 to 253   tiling clone,   253/253
(100 %)
3 diff
(98.9 %id)
DA898182 skeletal muscle .vf 57 to 535 2 to 479   capped   478/478
(100 %)
1 diff
(99.8 %id)
BQ932662 sciatic nerve .vf 61 to 940 1 to 887   tiling clone,   887/889
(99 %)
15 diff
(98.4 %id)
BE764109 nervous_tumor .vf 65 to 474 1 to 410       410/410
(100 %)
5 diff
(98.8 %id)
BE693231 breast .vf 76 to 576 505 to 5       501/505
(99 %)
0 diff
(100 %id)
AW888880 nervous_tumor .vf 83 to 658 576 to 2       575/579
(99 %)
1 diff
(99.9 %id)
BM707747.
matches multiple genes
eye, RPE and Choroid .vf 85 to 570 1 to 486     also hits gene GGT5 486/486
(100 %)
1 diff
(99.8 %id)
BM724569 eye, fetal eye .vf 85 to 474 1 to 389   fully sequenced,   389/389
(100 %)
1 diff
(99.8 %id)
CN297072 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .vf 93 to 621 1 to 529   tiling clone,   529/529
(100 %)
1 diff
(99.9 %id)
AA147145 colon, tumor .vf 93 to 502 1 to 429   fully sequenced,   429/429
(100 %)
20 diff
(95.4 %id)
AA307132 colon .vf 105 to 611 1 to 505       505/505
(100 %)
4 diff
(99.3 %id)
BU741723 eye, fetal eye .vf 444 to 1077 634 to 1   tiling clone, fully sequenced,   634/634
(100 %)
5 diff
(99.3 %id)
AA147088 colon, tumor .vf 472 to 1065 583 to 1   fully sequenced,   583/583
(100 %)
15 diff
(97.5 %id)
BE719354 head_neck .vg 1 to 397 400 to 5       396/400
(99 %)
0 diff
(100 %id)
BE719358 head_neck .vg 1 to 403 404 to 3   tiling clone,   402/404
(99 %)
0 diff
(100 %id)
AI909782 breast .vg 158 to 576 429 to 3 Q2L T4X S5K Q6P D7R ...     427/443
(96 %)
13 diff
(97.1 %id)
CK004305 brain/CNS, Human Brain - Cerebellar Cortex .vg 160 to 807 1 to 642       642/646
(99 %)
11 diff
(98.3 %id)
AW889502 nervous_tumor .vg 165 to 437 273 to 1       273/273
(100 %)
2 diff
(99.3 %id)
BI040099 nervous_tumor .vg 170 to 543 1 to 374       374/374
(100 %)
24 diff
(93.6 %id)
BE562290 Burkitt lymphoma, lymph .vg 170 to 994 32 to 857   tiling clone,   826/963
(85 %)
26 diff
(97.4 %id)
BE397694 Burkitt lymphoma, lymph .vg 172 to 815 28 to 669       642/670
(95 %)
10 diff
(98.6 %id)
CN297073 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .vg 187 to 919 9 to 742   tiling clone,   734/742
(98 %)
7 diff
(99.1 %id)
DA481071   .vh 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DB001351 breast, tumor tissue .vh 1 to 539 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DB119906 thymus .vh 1 to 541 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA467661 cord Blood .vh 3 to 563 2 to 562 L20F Q73R tiling clone, capped   561/561
(100 %)
3 diff
(99.5 %id)
CF594044 Human Placenta, placenta .vi 1 to 696 30 to 731 Q27R T91A tiling clone,   703/864
(81 %)
29 diff
(96.7 %id)
BM547441 ovary (pool of 3) .vi 19 to 897 1 to 881 R86D S87L C88A W89G S90V ... tiling clone,   881/1092
(80 %)
24 diff
(97.9 %id)
DA222137 brain .vj 1 to 517 2 to 517 exact tiling clone, capped   516/516
(100 %)
3 diff
(99.5 %id)
DA444698 tongue, tumor tissue .vk 1 to 759 2 to 573 H2P R3H R4L R5T L6E ... tiling clone, capped Suspected internal deletion 572/572
(100 %)
0 diff
(100 %id)
DA152051 amygdala .vl 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
BG704858 brain, hippocampus .vl 113 to 592 1 to 480 R44Q     480/480
(100 %)
5 diff
(99.0 %id)
DA172350 amygdala .vl 235 to 804 2 to 571   tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
DA286968 corpus callosum .vl 399 to 944 2 to 553   tiling clone, capped   552/552
(100 %)
8 diff
(98.6 %id)
BF365258 nervous_tumor .vl 418 to 759 14 to 359       346/359
(96 %)
6 diff
(98.4 %id)
BF913625 uterus_tumor .vm 1 to 215 229 to 18 Q42P Y59T N60P L61V S62V ... tiling clone, Submitted on the opposite strand 212/234
(90 %)
1 diff
(99.6 %id)
AK074944   .vn 1 to 2717 2 to 2718 exact tiling clone, available from FLJ,   2718/2718
(100 %)
2 diff
(100.0 %id)
DA735899   .vn 1 to 717 2 to 717 exact capped   716/718
(99 %)
7 diff
(99.1 %id)
DA637444 Liver .vn 1046 to 1514 2 to 470   capped   469/469
(100 %)
0 diff
(100 %id)
BP381506 adipose tissue .vn 1381 to 1992 1 to 612       612/612
(100 %)
0 diff
(100 %id)
DB368280   .vn 2329 to 2717 388 to 1       388/433
(89 %)
4 diff
(99.1 %id)
DA405408 thalamus .vo-u 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
CN412447 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .vo-u 310 to 908 1 to 598   tiling clone,   598/598
(100 %)
2 diff
(99.7 %id)
BM549608 astrocytoma grade IV, cell line, brain .vp-u 1 to 716 1 to 717 exact tiling clone,   717/1134
(63 %)
17 diff
(98.6 %id)
DA114315 cerebellum .vq-u 1 to 571 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
BC150504 PCR rescued clones, C list .vq-u 7 to 467 1 to 461       461/485
(95 %)
7 diff
(98.6 %id)
BQ355003 head_neck .vq-u 137 to 506 91 to 464       374/466
(80 %)
8 diff
(98.3 %id)
CN338439 embryonic stem cells, cell lines H1, H7, andH9 .vq-u 178 to 644 1 to 467 exact tiling clone,   467/467
(100 %)
1 diff
(99.8 %id)
BQ271484 Pancreas, Purified pancreatic islet .vr-u 1 to 509 1 to 510   tiling clone,   510/510
(100 %)
5 diff
(99.1 %id)
BF477545 carcinoid, lung .vr-u 21 to 585 616 to 35 I44D L45S S46I G47W C49L ...     582/616
(94 %)
0 diff
(100 %id)
CK825520 Pancreas, Purified pancreatic islet .vr-u 37 to 621 585 to 1 S21Y A22K P23K tiling clone, Submitted on the opposite strand 585/589
(99 %)
11 diff
(98.2 %id)
BQ271185 Pancreas, Purified pancreatic islet .vr-u 167 to 613 447 to 1 exact     447/447
(100 %)
1 diff
(99.8 %id)
BF448299 carcinoid, lung .vr-u 172 to 612 441 to 1 exact tiling clone,   441/445
(99 %)
0 diff
(100 %id)
DA182965 amygdala .vs 1 to 557 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
DA374870 thalamus .vt 1 to 549 2 to 552 L38X S39E P40S F41V S42F ... tiling clone, capped   551/551
(100 %)
5 diff
(99.1 %id)
BX645482   .vu 1 to 521 1 to 521   tiling clone,   521/521
(100 %)
5 diff
(99.1 %id)
BX645481   .vu 9 to 531 1 to 523 I15X F26X tiling clone,   523/530
(98 %)
1 diff
(99.9 %id)
BX645452   .vu 10 to 371 1 to 362       362/362
(100 %)
1 diff
(99.8 %id)
AB037729 brain Gene GBGT1andRALGDS, variant not shown       available from KIAA, This clone was ignored    
AI903044 breast Gene GBGT1andRALGDS, variant not shown         This clone was ignored    
AK090450 Spleen Gene GBGT1andRALGDS, variant not shown       available from FLJ, This clone was ignored    
BF992988 placenta_normal Gene GBGT1andRALGDS, variant not shown         Suspected internal deletion, this clone was ignored    
DA057351 cerebellum Gene GBGT1andRALGDS, variant not shown       capped This clone was ignored    
DB305832 brain Gene GBGT1andRALGDS, variant not shown         This clone was ignored    
DA239079 brain Gene GBGT1andRALGDS, variant not shown       capped This clone was ignored    
DA255562 caudate nucleus Gene GBGT1andRALGDS, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB312555 thalamus Gene GBGT1andRALGDS, variant not shown         This clone was ignored    
DA410215 thalamus Gene GBGT1andRALGDS, variant not shown       capped This clone was ignored    
DB355879 whole embryo, mainly head Gene GBGT1andRALGDS, variant not shown         Suspected internal deletion, this clone was ignored    
AU117898 whole embryo, mainly head Gene GBGT1andRALGDS, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB356917 whole embryo, mainly head Gene GBGT1andRALGDS, variant not shown         Suspected internal deletion, this clone was ignored    
DA570172 whole embryo, mainly head Gene GBGT1andRALGDS, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI131006 heart Gene GBGT1andRALGDS, variant not shown       AAA This clone was ignored    
AI131235 heart Gene GBGT1andRALGDS, variant not shown       AAA This clone was ignored    
AI915762 pooled Gene GBGT1andRALGDS, variant not shown         Suspected internal deletion, this clone was ignored    
BG912435 anaplastic oligodendroglioma with 1p/19qloss, brain Gene GBGT1andRALGDS, variant not shown       AAA This clone was ignored    
BM171636 anaplastic oligodendroglioma with 1p/19qloss, brain Gene GBGT1andRALGDS, variant not shown         Suspected internal deletion, this clone was ignored    
BQ070780 brain, neuroblastoma, cell line Gene GBGT1andRALGDS, variant not shown         Suspected internal deletion, this clone was ignored    
BU175538 embryonal carcinoma, cell line, testis Gene GBGT1andRALGDS, variant not shown              
BQ890280 dorsal root ganglia Gene GBGT1andRALGDS, variant not shown         This clone was ignored    
CF593717 Human Placenta, placenta Gene GBGT1andRALGDS, variant not shown              
DB361865 mammary gland Gene GBGT1andRALGDS, variant not shown         This clone was ignored    
DA647050 mammary gland Gene GBGT1andRALGDS, variant not shown       capped This clone was ignored    
DA789437 brain Gene GBGT1andRALGDS, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB377108 placenta Gene GBGT1andRALGDS, variant not shown         This clone was ignored    
DA831443 placenta Gene GBGT1andRALGDS, variant not shown       capped This clone was ignored    
BP340884 stomach mucosa Gene GBGT1andRALGDS, variant not shown         Suspected internal deletion, this clone was ignored    
DB139178 thymus Gene GBGT1andRALGDS, variant not shown       capped This clone was ignored    
DB345245 thymus Gene GBGT1andRALGDS, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u-u, .va-u, .vb, .vc, .vd, .ve, .vf, .vg, .vh, .vi, .vj, .vk, .vl, .vm, .vn, .vo-u, .vp-u, .vq-u, .vr-u, .vs, .vt, .vu Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI