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Gene FXYD1andFXYD7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
128 supporting clones for gene FXYD1andFXYD7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
H75358 liver and spleen .a 1 to 435 17 to 452 P61X H81X P83X R99X L105X ... tiling clone,   436/463
(94 %)
19 diff
(95.9 %id)
H23568 brain .a 99 to 436 1 to 346   tiling clone, Submitted on the opposite strand 346/353
(98 %)
16 diff
(95.5 %id)
DA180045 amygdala .b-u 1 to 538 2 to 539   tiling clone, capped   538/538
(100 %)
0 diff
(100 %id)
CV380301 nervous_normal .b-u 485 to 785 1 to 301   tiling clone,   301/310
(97 %)
17 diff
(94.6 %id)
TI_154119271   .c 1 to 511 599 to 90 G4V L5S L6S T7P M8W ... AAA   510/964
(52 %)
3 diff
(99.7 %id)
CN479686 Knee, Osteoarthritic Cartilage .c 1 to 511 526 to 17 G4V L5S L6S T7P M8W ... tiling clone, AAA   510/532
(95 %)
3 diff
(99.5 %id)
AA742559 pooled germ cell tumors .c 216 to 509 293 to 1       293/293
(100 %)
4 diff
(98.7 %id)
AA730085 pooled germ cell tumors .c 218 to 501 292 to 1       300/292
(102 %)
15 diff
(94.9 %id)
CR596488 fetal brain .d 1 to 808 1 to 808 exact tiling clone,   808/808
(100 %)
0 diff
(100 %id)
AL536603 brain, fetal brain .d 1 to 808 1 to 807 exact     807/807
(100 %)
2 diff
(99.8 %id)
BQ181273 Knee, Osteoarthritic Cartilage .e 1 to 644 661 to 19 P17X G32V L33S L34S T35P ... tiling clone, AAA   643/643
(100 %)
2 diff
(99.7 %id)
F32911 pectoral muscle (after mastectomy) .e 273 to 577 1 to 304       304/304
(100 %)
6 diff
(98.1 %id)
BQ188956 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 294 to 596 1 to 303       303/303
(100 %)
3 diff
(99.1 %id)
BQ638990 eye, retina .f 1 to 619 1 to 619 exact tiling clone,   619/619
(100 %)
0 diff
(100 %id)
BQ445963 Knee, Osteoarthritic Cartilage .g-u 1 to 748 757 to 19 G2W G4S D5L L7G S8R ... tiling clone, AAA   739/739
(100 %)
9 diff
(98.8 %id)
CD171939 White Matter .h 1 to 683 1 to 683   tiling clone,   683/964
(70 %)
1 diff
(99.9 %id)
W25639 lung .h 4 to 271 21 to 290       270/326
(82 %)
10 diff
(97.0 %id)
AA326971 colon .h 23 to 275 1 to 254       254/254
(100 %)
1 diff
(99.7 %id)
BG001435 placenta_normal .h 64 to 429 13 to 378       366/393
(93 %)
11 diff
(97.3 %id)
AA722656 heart .h 69 to 331 274 to 12       267/274
(97 %)
11 diff
(96.0 %id)
U72245 heart .h 69 to 347 1 to 279       279/279
(100 %)
5 diff
(98.3 %id)
H21538 breast .h 71 to 191 1 to 121       121/121
(100 %)
1 diff
(99.2 %id)
H45585 brain .h 71 to 344 1 to 274       274/274
(100 %)
6 diff
(97.9 %id)
T77252 liver and spleen .h 74 to 278 1 to 205       205/205
(100 %)
2 diff
(99.1 %id)
GQ258667 uterus .h 87 to 273 1 to 187       187/191
(97 %)
1 diff
(99.5 %id)
D54701   .h 248 to 503 1 to 251       251/254
(98 %)
13 diff
(94.9 %id)
AJ346333 pectoral muscle (after mastectomy) .h 255 to 447 1 to 194       194/194
(100 %)
4 diff
(98.0 %id)
F33358 pectoral muscle (after mastectomy) .h 283 to 492 1 to 210       210/210
(100 %)
0 diff
(100 %id)
TI_57214862   .h 529 to 1165 29 to 665 exact tiling clone,   637/665
(95 %)
8 diff
(98.8 %id)
BI752789 brain .h 530 to 1165 1 to 636 exact tiling clone,   636/636
(100 %)
2 diff
(99.7 %id)
R46545 breast .i 1 to 345 5 to 352   tiling clone, fully sequenced,   346/350
(98 %)
17 diff
(95.2 %id)
AA524547 colon .i 2 to 592 589 to 7 G13V L14S L15S T89N     583/626
(93 %)
23 diff
(96.4 %id)
BX115036 liver and spleen .i 17 to 592 1 to 576 exact tiling clone,   576/580
(99 %)
1 diff
(99.9 %id)
H57207 liver and spleen .i 17 to 397 1 to 385   fully sequenced,   385/385
(100 %)
9 diff
(97.7 %id)
NM_005031.3   .i 46 to 592 1 to 547 exact RefSeq,   547/547
(100 %)
0 diff
(100 %id)
H45716 breast .i 47 to 459 1 to 417 I52H L53P I54H V55R L56A ...     414/446
(92 %)
18 diff
(96.0 %id)
DR004007 Liver .i 99 to 591 1 to 493 exact     493/493
(100 %)
4 diff
(99.2 %id)
R46546 breast .i 289 to 591 304 to 1   fully sequenced,   304/304
(100 %)
6 diff
(98.1 %id)
H57136 liver and spleen .i 367 to 584 218 to 1   fully sequenced,   218/218
(100 %)
1 diff
(99.6 %id)
AJ712312 heart .j 1 to 495 14 to 507 exact tiling clone,   494/516
(95 %)
11 diff
(97.9 %id)
BQ956193 sciatic nerve .j 22 to 488 1 to 467 exact tiling clone, AAA   467/467
(100 %)
0 diff
(100 %id)
TI_45236211   .k 1 to 465 81 to 544 exact tiling clone,   464/738
(62 %)
13 diff
(98.3 %id)
BI517792 pooled colon, kidney, stomach .k 2 to 465 1 to 463 exact tiling clone,   463/657
(70 %)
8 diff
(98.8 %id)
BG716713 brain, hypothalamus .k 12 to 463 1 to 455 exact     455/480
(94 %)
16 diff
(96.7 %id)
AJ708347 heart .k 14 to 534 1 to 520 exact     520/520
(100 %)
2 diff
(99.7 %id)
AJ709029 heart .k 16 to 539 1 to 523 H6P I7S L8W V9F F10S ...     523/523
(100 %)
1 diff
(99.9 %id)
AK289811 brain .k 16 to 593 1 to 578 exact tiling clone,   578/578
(100 %)
4 diff
(99.4 %id)
BM691130 eye, RPE and Choroid .k 16 to 538 1 to 523 exact fully sequenced, AAA   523/523
(100 %)
4 diff
(99.3 %id)
DA236407 brain .k 17 to 588 2 to 573 exact capped   572/572
(100 %)
3 diff
(99.5 %id)
DB496302 hypothalamus .k 17 to 480 1 to 464 exact     464/464
(100 %)
1 diff
(99.8 %id)
DR005972 Prostate .k 17 to 535 1 to 525 exact tiling clone, AAA   525/525
(100 %)
11 diff
(98.0 %id)
NM_021902.2   .k 22 to 533 1 to 512 exact RefSeq, AAA   512/512
(100 %)
0 diff
(100 %id)
BM856555 stomach .k 22 to 533 1 to 512 exact AAA   512/512
(100 %)
0 diff
(100 %id)
EL945679 eyeball .k 25 to 448 44 to 469 C11L V12C L14S L15P T16H ...     426/469
(90 %)
9 diff
(98.1 %id)
BM691684 eye, RPE and Choroid .k 32 to 533 8 to 509 exact fully sequenced, AAA   502/509
(98 %)
6 diff
(98.9 %id)
AJ709381 heart .k 41 to 533 1 to 492 H6P I7S L8W V9F F10S ...     492/502
(98 %)
2 diff
(99.7 %id)
AI219514 pooled .k 48 to 534 489 to 3 exact     487/495
(98 %)
8 diff
(98.4 %id)
AA040016 uterus .k 49 to 446 1 to 403 R90X R91Q R92A     403/404
(99 %)
6 diff
(98.6 %id)
AI125364   .k 60 to 536 479 to 3 exact     477/479
(99 %)
0 diff
(100 %id)
AI193610 lung .k 61 to 532 471 to 1 K19R A20Q E21K S22V P23Q ...     471/471
(100 %)
6 diff
(98.8 %id)
TI_57200457   .k 61 to 459 67 to 463 exact AAA   397/577
(68 %)
12 diff
(98.0 %id)
BI821295 pooled brain, lung, testis .k 62 to 459 1 to 396 exact     396/548
(72 %)
8 diff
(98.6 %id)
BM710327 eye, optic nerve .k 62 to 531 1 to 470 exact fully sequenced,   470/470
(100 %)
2 diff
(99.6 %id)
AW959802   .k 64 to 525 1 to 462 exact AAA   462/472
(97 %)
7 diff
(98.6 %id)
AA450343   .k 79 to 330 1 to 251       251/251
(100 %)
1 diff
(99.7 %id)
AI809210 pooled .k 82 to 534 453 to 1 exact     453/453
(100 %)
0 diff
(100 %id)
DB567323 hypothalamus .k 85 to 533 1 to 449 exact   Submitted on the opposite strand 449/449
(100 %)
1 diff
(99.8 %id)
T67078 liver and spleen .k 88 to 329 8 to 246   fully sequenced,   239/246
(97 %)
6 diff
(97.6 %id)
AW262746 brain, three pooled meningiomas .k 88 to 535 448 to 1 exact     448/456
(98 %)
0 diff
(100 %id)
BC032800 Brain, Lung, Testis, adult, pooled whole .k 89 to 533 1 to 445 exact available from MGC, AAA   445/445
(100 %)
0 diff
(100 %id)
AI740542 pooled .k 89 to 536 450 to 4 exact     447/450
(99 %)
0 diff
(100 %id)
BM687625 eye, eye anterior segment .k 89 to 535 1 to 447 exact     447/447
(100 %)
5 diff
(98.9 %id)
AI199648 anaplastic oligodendroglioma, brain .k 93 to 535 443 to 1 exact     443/443
(100 %)
0 diff
(100 %id)
AW341466 pooled .k 93 to 535 453 to 11 A2V AAA   443/443
(100 %)
3 diff
(99.4 %id)
AJ574176 pectoral muscle (after mastectomy) .k 102 to 535 1 to 432   AAA   432/432
(100 %)
6 diff
(98.7 %id)
BM707391 eye, eye anterior segment .k 105 to 533 26 to 454   fully sequenced,   429/454
(94 %)
6 diff
(98.7 %id)
AA448300   .k 117 to 536 423 to 4       420/423
(99 %)
2 diff
(99.6 %id)
AW005013 Kidney .k 120 to 533 413 to 1       413/413
(100 %)
2 diff
(99.6 %id)
AA111872 muscle, skeletal muscle .k 128 to 329 1 to 203   fully sequenced,   203/203
(100 %)
1 diff
(99.6 %id)
BM708895 eye, RPE and Choroid .k 129 to 535 1 to 406   fully sequenced, AAA   406/406
(100 %)
2 diff
(99.6 %id)
AJ573644 pectoral muscle (after mastectomy) .k 147 to 536 1 to 390       390/390
(100 %)
0 diff
(100 %id)
BQ639841 eye, retina .k 152 to 536 1 to 386       386/389
(99 %)
2 diff
(99.5 %id)
AI382459   .k 154 to 536 387 to 3       385/397
(96 %)
8 diff
(98.0 %id)
BM695523 eye, optic nerve .k 170 to 533 1 to 364   AAA   364/364
(100 %)
0 diff
(100 %id)
AA773770   .k 177 to 536 359 to 1       359/359
(100 %)
3 diff
(99.2 %id)
AJ346396 pectoral muscle (after mastectomy) .k 181 to 534 1 to 354       354/362
(97 %)
2 diff
(99.5 %id)
AI284280 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 195 to 535 358 to 18   AAA   341/341
(100 %)
1 diff
(99.8 %id)
BU728645 eye, human retina .k 205 to 535 349 to 19   AAA   331/331
(100 %)
6 diff
(98.2 %id)
BM671752 eye, optic nerve .k 231 to 533 321 to 19   fully sequenced, AAA   303/303
(100 %)
0 diff
(100 %id)
T67077 liver and spleen .k 268 to 536 270 to 2   fully sequenced,   269/270
(99 %)
1 diff
(99.7 %id)
AA086437 muscle, skeletal muscle .k 268 to 535 278 to 11   fully sequenced, AAA   268/268
(100 %)
1 diff
(99.7 %id)
BM663606 eye, RPE and Choroid .k 268 to 538 288 to 18   fully sequenced, AAA   271/271
(100 %)
0 diff
(100 %id)
BM662308 eye, RPE and Choroid .k 268 to 533 283 to 18   fully sequenced, AAA   266/266
(100 %)
0 diff
(100 %id)
BU731557 eye, RPE and Choroid .k 268 to 535 286 to 19   fully sequenced, AAA   268/268
(100 %)
1 diff
(99.7 %id)
BM673498 eye, eye anterior segment .k 268 to 502 235 to 1   fully sequenced,   235/235
(100 %)
0 diff
(100 %id)
AI141422 heart .k 314 to 525 240 to 21   AAA   228/220
(103 %)
8 diff
(96.4 %id)
AA450344   .k 360 to 534 179 to 4       176/179
(98 %)
0 diff
(100 %id)
DR978399 brain .k 419 to 534 1 to 115     Submitted on the opposite strand 115/124
(92 %)
4 diff
(96.8 %id)
DB273183 uterus .l 1 to 567 2 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
DB094948 testis .l 2 to 588 2 to 589 D27X F29V T30H Y31L D32R ... tiling clone, capped   588/588
(100 %)
1 diff
(99.9 %id)
R72515 breast .l 3 to 364 1 to 364 G5X F64X     364/431
(84 %)
7 diff
(98.4 %id)
T84313 liver and spleen .l 37 to 351 1 to 315   fully sequenced,   315/315
(100 %)
0 diff
(100 %id)
AA365630 pineal body .l 46 to 375 1 to 334 L4X F10X I46F F80X S83F ...     334/338
(98 %)
10 diff
(97.1 %id)
T85195 liver and spleen .l 251 to 349 99 to 1   fully sequenced,   99/99
(100 %)
1 diff
(99.0 %id)
NM_022006.1   .m 1 to 713 1 to 713 exact RefSeq,   713/713
(100 %)
0 diff
(100 %id)
BI602801 brain, hypothalamus .m 9 to 509 1 to 500 exact tiling clone,   500/503
(99 %)
13 diff
(97.5 %id)
TI_45212514   .m 15 to 509 90 to 583 exact     494/586
(84 %)
13 diff
(97.8 %id)
BC018619 Uterus, endometrium adenocarcinoma .m 17 to 712 1 to 696 exact tiling clone, available from MGC, AAA   696/696
(100 %)
0 diff
(100 %id)
AK057825 brain .m 26 to 712 1 to 687 exact available from FLJ,   687/687
(100 %)
1 diff
(99.9 %id)
BP211533 cerebrum .m 26 to 606 1 to 581 exact     581/581
(100 %)
1 diff
(99.9 %id)
BP309571 brain .m 26 to 613 1 to 588 exact     588/588
(100 %)
2 diff
(99.7 %id)
BE392803 endometrium, adenocarcinoma cell line, uterus .m 36 to 685 1 to 647 exact     647/649
(99 %)
18 diff
(97.3 %id)
DB170552 kidney, tumor tissue .m 36 to 313 2 to 279   capped   278/570
(48 %)
6 diff
(99.0 %id)
CR598444 adult brain .m 48 to 707 1 to 660 exact     660/660
(100 %)
0 diff
(100 %id)
BX422815 adult brain, brain .m 48 to 707 1 to 660 S60N     660/660
(100 %)
2 diff
(99.7 %id)
BE390832 endometrium, adenocarcinoma cell line, uterus .m 48 to 706 1 to 655 exact AAA   655/655
(100 %)
14 diff
(97.9 %id)
CV029174 mixed .m 85 to 326 1 to 242       242/428
(56 %)
1 diff
(99.8 %id)
BX103270 anaplastic oligodendroglioma, brain .m 109 to 369 1 to 262       262/262
(100 %)
1 diff
(99.7 %id)
DN992748 brain, whole brain .m 115 to 623 10 to 518       509/518
(98 %)
7 diff
(98.7 %id)
AI089023 pooled .m 124 to 711 593 to 6       588/593
(99 %)
7 diff
(98.9 %id)
AI086449 anaplastic oligodendroglioma, brain .m 258 to 705 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AW895054 nervous_normal .n 1 to 376 387 to 12 exact tiling clone,   376/387
(97 %)
0 diff
(100 %id)
AI929519 brain, frontal lobe .o 1 to 416 1 to 416 exact tiling clone, fully sequenced,   416/416
(100 %)
2 diff
(99.6 %id)
AI937041 anaplastic oligodendroglioma, brain .o 260 to 704 468 to 24   AAA   445/445
(100 %)
27 diff
(94.0 %id)
AI084856 anaplastic oligodendroglioma, brain .o 309 to 696 388 to 1       388/388
(100 %)
0 diff
(100 %id)
BE672351 pooled germ cell tumors .o 333 to 698 369 to 4   tiling clone,   366/369
(99 %)
0 diff
(100 %id)
AW297893   .o 340 to 698 376 to 18   AAA   359/359
(100 %)
0 diff
(100 %id)
AI871191 anaplastic oligodendroglioma, brain .o 371 to 704 347 to 14   AAA   334/334
(100 %)
13 diff
(96.2 %id)
AI929562 brain, frontal lobe .o 386 to 709 326 to 4   tiling clone, fully sequenced,   323/326
(99 %)
7 diff
(97.9 %id)
BF944300 nervous_normal .o 419 to 605 1 to 187       187/201
(93 %)
6 diff
(97.1 %id)
AW006222 anaplastic oligodendroglioma, brain .o 431 to 702 272 to 1       272/272
(100 %)
0 diff
(100 %id)
AI864578 anaplastic oligodendroglioma, brain .o 471 to 704 250 to 15   AAA   236/236
(100 %)
10 diff
(95.8 %id)
BX452521 adult brain, brain .o 568 to 698 1 to 131       131/136
(96 %)
4 diff
(97.1 %id)
AK296405 thalamus .p 1 to 1111 1 to 1111 exact tiling clone,   1111/1111
(100 %)
1 diff
(100.0 %id)
DA407133 thalamus .p 2 to 539 2 to 539 exact capped   538/538
(100 %)
1 diff
(99.9 %id)
DA332576 hippocampus .p 30 to 613 2 to 585 exact tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
CR617501 fetal liver Gene FXYD1andFXYD7, variant not shown         Suspected internal deletion, this clone was ignored    
BX447948 fetal liver, Liver Gene FXYD1andFXYD7, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
BX447949 fetal liver, Liver Gene FXYD1andFXYD7, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
T67274 liver and spleen Gene FXYD1andFXYD7, variant not shown       fully sequenced, This clone was ignored    
T67275 liver and spleen Gene FXYD1andFXYD7, variant not shown       fully sequenced, This clone was ignored    
AA635732 normal prostate, Prostate Gene FXYD1andFXYD7, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d, .e, .f, .g-u, .h, .i, .j, .k, .l, .m, .n, .o, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI