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Gene FUT6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
84 supporting clones for gene FUT6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA761273 tongue .a 1 to 526 2 to 527   tiling clone, capped   526/526
(100 %)
1 diff
(99.9 %id)
U27331 Kidney .a 436 to 1530 1 to 1095 exact tiling clone,   1095/1095
(100 %)
0 diff
(100 %id)
BI055086 placenta_normal .b 1 to 360 1 to 370   tiling clone,   370/370
(100 %)
18 diff
(95.2 %id)
U27337 Kidney .b 317 to 2914 1 to 2595 exact tiling clone,   2595/2612
(99 %)
19 diff
(99.3 %id)
AI952786 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2462 to 2906 445 to 1   tiling clone,   445/445
(100 %)
5 diff
(98.9 %id)
NM_001040701.1   .c 1 to 3009 1 to 3009 exact RefSeq,   3009/3009
(100 %)
0 diff
(100 %id)
DA915797 small intestine .c 11 to 708 2 to 699   tiling clone, capped   698/698
(100 %)
1 diff
(99.9 %id)
BG426471 Kidney .c 14 to 789 1 to 774       774/774
(100 %)
15 diff
(98.1 %id)
BC061700 Kidney .c 15 to 2848 5 to 2838 Q23H P124S E247K tiling clone, available from MGC, AAA   2834/2834
(100 %)
5 diff
(99.9 %id)
DA633178 Kidney .c 31 to 557 2 to 526   capped   525/525
(100 %)
1 diff
(99.9 %id)
DA635526 Kidney .c 31 to 589 2 to 560   tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DA625642 Kidney .c 63 to 596 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DA630099 Kidney .c 63 to 628 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA636801 Kidney .c 70 to 644 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BM856050 stomach .c 76 to 345 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
AI953606 Kidney .c 407 to 901 1 to 495     Submitted on the opposite strand 495/495
(100 %)
2 diff
(99.6 %id)
AI953599 Kidney .c 407 to 907 1 to 501     Submitted on the opposite strand 501/501
(100 %)
2 diff
(99.7 %id)
AK225795 Kidney .c 494 to 2294 1 to 1801 P124S E247K tiling clone,   1801/1801
(100 %)
3 diff
(99.9 %id)
U27336 colon, liver .c 715 to 2863 1 to 2144 exact tiling clone,   2144/2145
(99 %)
9 diff
(99.6 %id)
DA376517 thalamus .c 742 to 1303 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
AU103916   .c 940 to 989 1 to 50       50/50
(100 %)
0 diff
(100 %id)
DA379498 thalamus .c 941 to 1482 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA381372 thalamus .c 941 to 1566 2 to 627   capped   626/626
(100 %)
1 diff
(99.9 %id)
BP224040 colon mucosa .c 941 to 1621 1 to 688       688/694
(99 %)
12 diff
(98.3 %id)
AU098944   .c 941 to 1239 1 to 299       299/300
(99 %)
7 diff
(97.7 %id)
BP239786 Liver .c 941 to 1551 1 to 611       611/611
(100 %)
25 diff
(96.0 %id)
DA921469 small intestine .c 941 to 1500 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB222431 trachea .c 941 to 1520 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
AK313130 tongue, tumor tissue .c 942 to 2147 1 to 1206 N91I A214T     1206/1206
(100 %)
3 diff
(99.8 %id)
DA371280 thalamus .c 943 to 1483 2 to 542   capped   541/542
(99 %)
2 diff
(99.7 %id)
DA454770 tongue, tumor tissue .c 943 to 1506 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA668692 esophagus .c 943 to 1497 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DB258898 uterus .c 943 to 1511 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA043519 bladder .c 951 to 1521 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA866283 Prostate .c 953 to 1516 11 to 578   capped   568/569
(99 %)
5 diff
(99.2 %id)
DA669640 esophagus .c 954 to 1466 2 to 515   capped   514/514
(100 %)
3 diff
(99.5 %id)
DB197553 trachea .c 970 to 1538 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB209813 trachea .c 990 to 1479 2 to 491   capped   490/490
(100 %)
1 diff
(99.8 %id)
DB237641 trachea .c 990 to 1552 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
DA892361 rectum .c 991 to 1537 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DB204269 trachea .c 993 to 1561 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB197423 trachea .c 1001 to 1570 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
M98825   .c 1053 to 2176 1 to 1125 exact     1125/1126
(99 %)
6 diff
(99.5 %id)
TI_1948221446   .c 1067 to 1823 140 to 915       776/1227
(63 %)
33 diff
(97.4 %id)
EL735810 mixed .c 1068 to 1686 1 to 619       619/619
(100 %)
3 diff
(99.6 %id)
AW176527 colon .c 1120 to 1264 150 to 5       146/156
(93 %)
0 diff
(100 %id)
BP328886 rectum .c 1133 to 1715 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BE833439 ovary .c 1673 to 1897 26 to 251       226/251
(90 %)
6 diff
(97.7 %id)
BG432556 Kidney .c 1790 to 2617 1 to 828       828/838
(98 %)
49 diff
(94.2 %id)
BG402446 Kidney .c 1799 to 2289 1 to 501       501/822
(60 %)
17 diff
(98.0 %id)
BQ362382.
matches multiple genes
stomach .c 1905 to 2116 211 to 2     also hits gene FUT3 210/211
(99 %)
0 diff
(100 %id)
BG952128 colon .c 1989 to 2148 159 to 1       159/159
(100 %)
7 diff
(95.6 %id)
DB331604 small intestine .c 2539 to 3009 468 to 1   tiling clone,   468/474
(98 %)
12 diff
(97.5 %id)
AL702935 human skeletal muscle .d 1 to 733 1 to 733 I93R tiling clone,   733/736
(99 %)
4 diff
(99.5 %id)
DA636084 Kidney .e 1 to 544 2 to 545   tiling clone, capped   544/544
(100 %)
2 diff
(99.7 %id)
DA622182 Kidney .e 26 to 571 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
NM_000150.2   .e 26 to 3162 1 to 3137 exact RefSeq,   3137/3137
(100 %)
0 diff
(100 %id)
DA628976 Kidney .e 32 to 614 2 to 584   capped   583/583
(100 %)
3 diff
(99.5 %id)
BG399412 Kidney .e 34 to 691 1 to 656   tiling clone, available from MGC,   656/657
(99 %)
16 diff
(97.6 %id)
DA622558 Kidney .e 36 to 603 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DA628554 Kidney .e 36 to 553 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
DA635326 Kidney .e 36 to 602 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA631192 Kidney .e 43 to 582 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
U27334 colon, liver .e 740 to 3016 1 to 2269 exact tiling clone,   2273/2270
(100 %)
15 diff
(99.4 %id)
DA426469 colon .e 933 to 1402 2 to 471   tiling clone, capped   470/470
(100 %)
1 diff
(99.8 %id)
BM773266 Ascites, stomach .e 963 to 1500 11 to 548       538/538
(100 %)
1 diff
(99.9 %id)
BM781603 Ascites, stomach .e 963 to 1631 11 to 679       669/669
(100 %)
1 diff
(99.9 %id)
DA916285 small intestine .e 966 to 1532 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BP221663 colon .e 967 to 1532 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DB203127 trachea .e 991 to 1517 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
AF131211 squamous cell carcinoma .f 1 to 2211 8 to 2218 exact tiling clone,   2211/2218
(99 %)
9 diff
(99.6 %id)
DA761223 tongue .g 1 to 529 2 to 530 exact tiling clone, capped   529/529
(100 %)
2 diff
(99.7 %id)
AK098073 trachea Gene FUT6, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
BX113350 Kidney Gene FUT6, variant not shown       AAA This clone was ignored    
BP241583 Liver Gene FUT6, variant not shown         This clone was ignored    
AI672482 Kidney Gene FUT6, variant not shown         Suspected internal deletion, this clone was ignored    
AW614132 Kidney Gene FUT6, variant not shown         This clone was ignored    
BC040472 Kidney Gene FUT6, variant not shown       available from MGC, AAA This clone was ignored    
BP275358 Kidney Gene FUT6, variant not shown         Suspected internal deletion, this clone was ignored    
BP275469 Kidney Gene FUT6, variant not shown         Suspected internal deletion, this clone was ignored    
DA621280 Kidney Gene FUT6, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB195641 trachea Gene FUT6, variant not shown       capped Suspected internal deletion, this clone was ignored    
U27332 Kidney Gene FUT6, variant not shown         Suspected internal deletion, this clone was ignored    
U27333 kidney, liver Gene FUT6, variant not shown         This clone was ignored    
U27335 kidney, liver Gene FUT6, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC