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Gene SRSF10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
746 representative clones for gene SRSF10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_054016.2   .a 1 to 3056 1 to 3056 exact RefSeq,   3056/3056
(100 %)
0 diff
(100 %id)
CX753635.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 63 to 762 1 to 700   tiling clone, Submitted on the opposite strand, also hits gene sasimo 700/700
(100 %)
0 diff
(100 %id)
CD300084.
matches multiple genes
testis .a 85 to 934 26 to 887   tiling clone, also hits gene sasimo 862/892
(96 %)
35 diff
(96.1 %id)
BI458522.
matches multiple genes
brain, hypothalamus .a 105 to 960 1 to 868     also hits gene sasimo 864/869
(99 %)
19 diff
(97.9 %id)
BI597234.
matches multiple genes
brain, hypothalamus .a 105 to 820 1 to 717     also hits gene sasimo 713/717
(99 %)
9 diff
(98.8 %id)
DN999517.
matches multiple genes
  .a 105 to 747 1 to 643   tiling clone, also hits gene sasimo 643/643
(100 %)
5 diff
(99.3 %id)
TI_45215205.
matches multiple genes
  .a 109 to 820 126 to 834     also hits gene sasimo 705/834
(84 %)
11 diff
(98.7 %id)
AK222994.
matches multiple genes
human small intestine .a 110 to 1067 1 to 958 M96I   also hits gene sasimo 958/958
(100 %)
1 diff
(99.9 %id)
BM910977.
matches multiple genes
astrocytoma grade IV, cell line, brain .a 114 to 971 1 to 858     also hits gene sasimo 858/1095
(78 %)
24 diff
(97.9 %id)
DA828012.
matches multiple genes
placenta .a 114 to 759 2 to 650   capped also hits gene sasimo 649/652
(99 %)
7 diff
(99.0 %id)
CN346218.
matches multiple genes
embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 116 to 757 9 to 650     also hits gene sasimo 638/650
(98 %)
6 diff
(99.1 %id)
BQ220979.
matches multiple genes
embryonal carcinoma, cell line, testis .a 120 to 992 1 to 882     also hits gene sasimo 882/912
(96 %)
33 diff
(96.4 %id)
DN994997.
matches multiple genes
brain, whole brain .a 121 to 815 9 to 703   tiling clone, also hits gene sasimo 691/703
(98 %)
7 diff
(99.1 %id)
CX754662.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 134 to 856 1 to 712     Submitted on the opposite strand, also hits gene sasimo 712/745
(95 %)
7 diff
(99.1 %id)
BG718106.
matches multiple genes
testis .a 139 to 885 9 to 751     also hits gene sasimo 739/751
(98 %)
15 diff
(98.1 %id)
BF308149.
matches multiple genes
muscle, rhabdomyosarcoma .a 144 to 849 1 to 704     also hits gene sasimo 704/709
(99 %)
21 diff
(97.1 %id)
BC005039 Muscle, rhabdomyosarcoma .a 145 to 1760 1 to 1616 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 1616/1616
(100 %)
1 diff
(100.0 %id)
CX785782.
matches multiple genes
human embryonic stem cells .a 147 to 937 1 to 791     also hits gene sasimo 791/791
(100 %)
0 diff
(100 %id)
BX331641.
matches multiple genes
Neuroblastoma Cot 10-normalized .a 149 to 954 1 to 805     also hits gene sasimo 805/805
(100 %)
5 diff
(99.4 %id)
CR977649.
matches multiple genes
T-Lymphocytes .a 150 to 1095 1 to 946 exact   also hits gene sasimo 946/946
(100 %)
0 diff
(100 %id)
BE269920.
matches multiple genes
Burkitt lymphoma, lymph .a 155 to 853 1 to 696     also hits gene sasimo 696/728
(95 %)
9 diff
(98.8 %id)
BE295413.
matches multiple genes
muscle, rhabdomyosarcoma .a 165 to 838 1 to 668     also hits gene sasimo 668/701
(95 %)
14 diff
(98.1 %id)
BG756434.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .a 172 to 926 1 to 755     also hits gene sasimo 755/793
(95 %)
13 diff
(98.4 %id)
AF067730.
matches multiple genes
leukemia .a 180 to 1042 1 to 863 exact   also hits gene sasimo 863/863
(100 %)
0 diff
(100 %id)
AU139169.
matches multiple genes
placenta .a 181 to 983 2 to 813   capped also hits gene sasimo 812/812
(100 %)
17 diff
(98.0 %id)
AA167835.
matches multiple genes
  .a 194 to 789 1 to 589     also hits gene sasimo 589/616
(95 %)
13 diff
(97.9 %id)
AY150180.
matches multiple genes
  .a 195 to 1750 1 to 1556 exact tiling clone, also hits gene sasimo 1556/1556
(100 %)
0 diff
(100 %id)
AF449427.
matches multiple genes
  .a 209 to 997 1 to 789 exact   also hits gene sasimo 789/789
(100 %)
0 diff
(100 %id)
BQ212161.
matches multiple genes
melanotic melanoma, skin .a 236 to 1099 1 to 876     also hits gene sasimo 876/889
(98 %)
30 diff
(96.7 %id)
DA501654.
matches multiple genes
brain .a 315 to 884 2 to 571   capped also hits gene sasimo 570/570
(100 %)
0 diff
(100 %id)
DA618627.
matches multiple genes
  .a 315 to 896 2 to 584   capped also hits gene sasimo 583/583
(100 %)
1 diff
(99.9 %id)
DA736140.
matches multiple genes
  .a 316 to 1112 2 to 794   capped also hits gene sasimo 793/878
(90 %)
7 diff
(99.3 %id)
BG168815.
matches multiple genes
hypernephroma, cell line, Kidney .a 404 to 873 1 to 472     also hits gene sasimo 472/1253
(37 %)
5 diff
(99.7 %id)
CN346220.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .a 409 to 988 1 to 580     also hits gene sasimo 580/580
(100 %)
3 diff
(99.5 %id)
BF683821.
matches multiple genes
leiomyosarcoma cell line, uterus .a 424 to 1104 1 to 680     also hits gene sasimo 680/683
(99 %)
8 diff
(98.9 %id)
BF794895.
matches multiple genes
lymph, lymphoma, cell line .a 431 to 1192 1 to 769     also hits gene sasimo 769/770
(99 %)
19 diff
(97.6 %id)
DA386509.
matches multiple genes
thalamus .a 461 to 1040 2 to 581   capped also hits gene sasimo 580/580
(100 %)
0 diff
(100 %id)
AI671789.
matches multiple genes
pooled germ cell tumors .a 483 to 1157 682 to 8     also hits gene sasimo 675/713
(94 %)
9 diff
(98.8 %id)
AU130523.
matches multiple genes
  .a 492 to 1211 2 to 721   capped also hits gene sasimo 720/723
(99 %)
7 diff
(99.1 %id)
BX367984 Neuroblastoma Cot 10-normalized .a 510 to 1359 861 to 19       843/863
(97 %)
21 diff
(97.6 %id)
BP241676.
matches multiple genes
Liver .a 548 to 1134 1 to 581     also hits gene sasimo 581/581
(100 %)
7 diff
(98.8 %id)
BE465236.
matches multiple genes
Kidney .a 644 to 1164 529 to 8     also hits gene sasimo 522/529
(98 %)
0 diff
(100 %id)
AW301727.
matches multiple genes
Kidney .a 646 to 1163 534 to 17   AAA also hits gene sasimo 518/529
(97 %)
4 diff
(99.3 %id)
AA167741.
matches multiple genes
  .a 1098 to 1760 650 to 1     also hits gene sasimo 650/652
(99 %)
14 diff
(97.9 %id)
DB372403.
matches multiple genes
placenta .a 1253 to 1760 507 to 1   tiling clone, also hits gene sasimo 507/509
(99 %)
9 diff
(98.3 %id)
TI_149282150.
matches multiple genes
  .a 2347 to 3056 832 to 122   tiling clone, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 711/1134
(62 %)
18 diff
(98.5 %id)
DA755867.
matches multiple genes
  .a 2365 to 2948 2 to 587   tiling clone, capped also hits gene sasimo 586/586
(100 %)
3 diff
(99.5 %id)
AW974470.
matches multiple genes
  .a 2440 to 3055 619 to 1     Submitted on the opposite strand, also hits gene sasimo 619/621
(99 %)
8 diff
(98.8 %id)
CB854495.
matches multiple genes
lung, Primary Lung Epithelial Cells .a 2489 to 3056 587 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 569/569
(100 %)
4 diff
(99.3 %id)
CD299391.
matches multiple genes
Blood vessels - aorta, basilar and artery .a 2494 to 3053 1 to 581   tiling clone, also hits gene sasimo 581/806
(72 %)
33 diff
(96.0 %id)
DB379361.
matches multiple genes
placenta .a 2498 to 3056 555 to 1   tiling clone, also hits gene sasimo 555/583
(95 %)
13 diff
(97.8 %id)
BE875276.
matches multiple genes
large cell carcinoma, undifferentiated, lung .a 2521 to 3003 1 to 483     also hits gene sasimo 483/483
(100 %)
4 diff
(99.2 %id)
AU153261.
matches multiple genes
  .a 2529 to 3062 540 to 4   tiling clone, also hits gene sasimo 537/541
(99 %)
0 diff
(100 %id)
AA923167.
matches multiple genes
carcinoid, lung .a 2543 to 3055 513 to 1     also hits gene sasimo 513/513
(100 %)
3 diff
(99.5 %id)
DB496345.
matches multiple genes
hypothalamus .a 2546 to 3013 1 to 470     also hits gene sasimo 470/470
(100 %)
14 diff
(97.1 %id)
BG054896.
matches multiple genes
brain, glioblastoma (pooled) .a 2556 to 3052 497 to 1     also hits gene sasimo 497/497
(100 %)
1 diff
(99.8 %id)
DB542903.
matches multiple genes
hippocampus .a 2566 to 3056 1 to 491     Submitted on the opposite strand, also hits gene sasimo 491/491
(100 %)
1 diff
(99.8 %id)
BM838961.
matches multiple genes
stomach .a 2568 to 3038 1 to 471     also hits gene sasimo 471/471
(100 %)
1 diff
(99.8 %id)
AU145320.
matches multiple genes
whole embryo, mainly head .a 2569 to 3056 488 to 1     also hits gene sasimo 488/489
(99 %)
1 diff
(99.8 %id)
AA648550.
matches multiple genes
germinal center B cell .a 2584 to 2990 407 to 1     also hits gene sasimo 407/407
(100 %)
3 diff
(99.3 %id)
DB539981.
matches multiple genes
hippocampus .a 2596 to 3056 1 to 461     Submitted on the opposite strand, also hits gene sasimo 461/461
(100 %)
1 diff
(99.8 %id)
N29845.
matches multiple genes
placenta .a 2596 to 3055 461 to 1     also hits gene sasimo 461/461
(100 %)
2 diff
(99.6 %id)
DB531584.
matches multiple genes
hippocampus .a 2612 to 3056 1 to 445     Submitted on the opposite strand, also hits gene sasimo 445/445
(100 %)
1 diff
(99.8 %id)
AA767665.
matches multiple genes
germinal center B cell .a 2622 to 2989 368 to 1     also hits gene sasimo 368/368
(100 %)
1 diff
(99.8 %id)
BU532434.
matches multiple genes
mixed (pool of 40 RNAs) .a 2650 to 3035 1 to 386   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 386/386
(100 %)
1 diff
(99.8 %id)
AW078954.
matches multiple genes
2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 2688 to 3040 353 to 1     also hits gene sasimo 353/353
(100 %)
0 diff
(100 %id)
AI817361.
matches multiple genes
lymph node, lymphoma, follicular mixed small and largecell .a 2689 to 3056 395 to 27   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 369/369
(100 %)
1 diff
(99.8 %id)
AI469552.
matches multiple genes
colon, moderately-differentiated adenocarcinoma .a 2693 to 3040 348 to 1     also hits gene sasimo 348/348
(100 %)
2 diff
(99.5 %id)
AI219160.
matches multiple genes
placenta .a 2709 to 3054 346 to 1     also hits gene sasimo 346/346
(100 %)
2 diff
(99.5 %id)
BE872675.
matches multiple genes
adenocarcinoma, colon .a 2712 to 3058 1 to 346     also hits gene sasimo 346/346
(100 %)
4 diff
(98.9 %id)
CB107001.
matches multiple genes
Liver .a 2735 to 3056 1 to 322   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 322/322
(100 %)
4 diff
(98.8 %id)
AA927152.
matches multiple genes
pooled .a 2749 to 3056 309 to 1     also hits gene sasimo 309/309
(100 %)
1 diff
(99.7 %id)
NM_001191005.1   .b 1 to 3053 1 to 3053 exact RefSeq,   3053/3053
(100 %)
0 diff
(100 %id)
CN346223.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 124 to 863 1 to 740   tiling clone, also hits gene sasimo 740/740
(100 %)
0 diff
(100 %id)
BG705598.
matches multiple genes
brain, hypothalamus .b 130 to 883 1 to 750     also hits gene sasimo 750/751
(99 %)
21 diff
(97.3 %id)
BE259202.
matches multiple genes
eye, retinoblastoma .b 136 to 807 1 to 670     also hits gene sasimo 670/757
(88 %)
19 diff
(97.5 %id)
DA747107.
matches multiple genes
  .b 136 to 712 2 to 579   capped also hits gene sasimo 578/578
(100 %)
1 diff
(99.9 %id)
AK001656.
matches multiple genes
  .b 137 to 3053 1 to 2918 exact tiling clone, available from FLJ, also hits gene sasimo 2918/2918
(100 %)
3 diff
(99.9 %id)
DA619618.
matches multiple genes
  .b 138 to 705 2 to 569   capped also hits gene sasimo 568/568
(100 %)
0 diff
(100 %id)
AU132812.
matches multiple genes
  .b 138 to 841 2 to 702   capped also hits gene sasimo 701/701
(100 %)
5 diff
(99.3 %id)
CN346222.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .b 155 to 725 1 to 571     also hits gene sasimo 571/571
(100 %)
0 diff
(100 %id)
CN346216.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .b 156 to 858 1 to 703     also hits gene sasimo 703/703
(100 %)
1 diff
(99.9 %id)
DB143444.
matches multiple genes
thymus .b 169 to 706 2 to 539   capped also hits gene sasimo 538/538
(100 %)
0 diff
(100 %id)
DA616695.
matches multiple genes
  .b 181 to 752 2 to 573   capped also hits gene sasimo 572/572
(100 %)
1 diff
(99.9 %id)
DA847032.
matches multiple genes
placenta .b 181 to 723 2 to 544   capped also hits gene sasimo 543/543
(100 %)
1 diff
(99.9 %id)
BM463794.
matches multiple genes
leiomyosarcoma, uterus .b 307 to 1340 1 to 1030     also hits gene sasimo 1030/1030
(100 %)
22 diff
(97.9 %id)
DA545244.
matches multiple genes
  .b 405 to 957 2 to 555   capped also hits gene sasimo 554/554
(100 %)
1 diff
(99.9 %id)
AA311157.
matches multiple genes
  .b 422 to 970 1 to 551     also hits gene sasimo 551/552
(99 %)
9 diff
(98.4 %id)
BE779860.
matches multiple genes
eye, retinoblastoma .b 533 to 1211 1 to 678     also hits gene sasimo 678/952
(71 %)
17 diff
(98.3 %id)
BX100785.
matches multiple genes
whole brain .b 659 to 1160 517 to 15   AAA also hits gene sasimo 503/503
(100 %)
1 diff
(99.9 %id)
CN346215.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .b 679 to 935 1 to 257     also hits gene sasimo 257/257
(100 %)
2 diff
(99.3 %id)
AA345205.
matches multiple genes
gall bladder .b 690 to 839 1 to 150     also hits gene sasimo 150/150
(100 %)
0 diff
(100 %id)
BX429974 fetal liver, Liver .b 691 to 971 1 to 281       281/281
(100 %)
4 diff
(98.6 %id)
BU932744.
matches multiple genes
mixed (pool of 40 RNAs) .b 694 to 1502 1 to 815     also hits gene sasimo 815/822
(99 %)
27 diff
(96.8 %id)
AA713517.
matches multiple genes
germinal center B cell .b 696 to 1160 489 to 25   AAA also hits gene sasimo 465/465
(100 %)
0 diff
(100 %id)
BP244037.
matches multiple genes
Liver .b 700 to 1256 1 to 557     also hits gene sasimo 557/557
(100 %)
3 diff
(99.5 %id)
AW368702.
matches multiple genes
head_neck .b 719 to 903 187 to 3     also hits gene sasimo 185/187
(98 %)
0 diff
(100 %id)
AW057530.
matches multiple genes
pooled .b 720 to 1157 445 to 8     also hits gene sasimo 438/445
(98 %)
0 diff
(100 %id)
BF857965.
matches multiple genes
prostate_tumor .b 722 to 841 14 to 133     also hits gene sasimo 120/133
(90 %)
6 diff
(95.5 %id)
AU131627.
matches multiple genes
  .b 722 to 1472 2 to 752   capped also hits gene sasimo 751/753
(99 %)
4 diff
(99.5 %id)
DA542762.
matches multiple genes
  .b 731 to 1291 2 to 562   capped also hits gene sasimo 561/561
(100 %)
1 diff
(99.9 %id)
DA879699.
matches multiple genes
Prostate .b 732 to 1321 2 to 589   capped also hits gene sasimo 588/588
(100 %)
1 diff
(99.9 %id)
BX479807.
matches multiple genes
  .b 736 to 1262 1 to 527     also hits gene sasimo 527/527
(100 %)
1 diff
(99.9 %id)
BE775067.
matches multiple genes
uterus .b 738 to 949 14 to 225     also hits gene sasimo 212/236
(89 %)
2 diff
(99.2 %id)
BE775088.
matches multiple genes
uterus .b 738 to 949 14 to 225     also hits gene sasimo 212/236
(89 %)
2 diff
(99.2 %id)
AU121116.
matches multiple genes
whole embryo, mainly body .b 749 to 1472 2 to 725   capped also hits gene sasimo 724/724
(100 %)
0 diff
(100 %id)
BX456710.
matches multiple genes
thymus .b 751 to 1469 6 to 724     also hits gene sasimo 719/724
(99 %)
6 diff
(99.2 %id)
AW469626.
matches multiple genes
pooled .b 769 to 1168 408 to 9     also hits gene sasimo 400/410
(97 %)
0 diff
(100 %id)
BP244013.
matches multiple genes
Liver .b 772 to 1322 1 to 550     also hits gene sasimo 550/550
(100 %)
8 diff
(98.6 %id)
DA740354.
matches multiple genes
  .b 781 to 1286 2 to 507   capped also hits gene sasimo 506/506
(100 %)
0 diff
(100 %id)
BE893891.
matches multiple genes
melanotic melanoma, skin .b 797 to 1508 1 to 710     also hits gene sasimo 710/922
(77 %)
21 diff
(97.8 %id)
DB129958.
matches multiple genes
thymus .b 797 to 1366 2 to 571   capped also hits gene sasimo 570/570
(100 %)
0 diff
(100 %id)
AA569618.
matches multiple genes
Prostate, prostatic intraepithelial neoplasia - highgrade .b 806 to 1050 1 to 245     also hits gene sasimo 245/298
(82 %)
3 diff
(99.0 %id)
AW602490.
matches multiple genes
breast .b 840 to 1110 271 to 1     also hits gene sasimo 271/271
(100 %)
3 diff
(98.9 %id)
BP289515.
matches multiple genes
lung .b 852 to 1427 1 to 577     also hits gene sasimo 577/581
(99 %)
3 diff
(99.5 %id)
DA748760.
matches multiple genes
  .b 859 to 1434 2 to 578   capped also hits gene sasimo 577/580
(99 %)
2 diff
(99.7 %id)
AI478528.
matches multiple genes
Kidney .b 864 to 1161 301 to 4     also hits gene sasimo 298/301
(99 %)
0 diff
(100 %id)
BP241611.
matches multiple genes
Liver .b 872 to 1446 1 to 575     also hits gene sasimo 575/575
(100 %)
4 diff
(99.4 %id)
BX331640 Neuroblastoma Cot 10-normalized .b 902 to 1718 817 to 1       817/826
(98 %)
7 diff
(99.2 %id)
AW368701.
matches multiple genes
head_neck .b 923 to 1116 194 to 1     also hits gene sasimo 194/194
(100 %)
2 diff
(99.0 %id)
BF923288.
matches multiple genes
nervous_tumor .b 966 to 1433 27 to 492     also hits gene sasimo 466/492
(94 %)
6 diff
(98.8 %id)
CN346226.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .b 967 to 1536 1 to 570     also hits gene sasimo 570/570
(100 %)
3 diff
(99.5 %id)
CV802925 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 993 to 1652 1 to 655       655/783
(83 %)
6 diff
(99.3 %id)
BE179961.
matches multiple genes
head_neck .b 1020 to 1513 497 to 5     Submitted on the opposite strand, also hits gene sasimo 493/497
(99 %)
0 diff
(100 %id)
BE709775.
matches multiple genes
head_neck .b 1020 to 1504 493 to 9     also hits gene sasimo 485/493
(98 %)
0 diff
(100 %id)
BP242279.
matches multiple genes
Liver .b 1029 to 1588 1 to 560     also hits gene sasimo 560/560
(100 %)
5 diff
(99.2 %id)
BF802609.
matches multiple genes
colon_ins .b 1030 to 1410 383 to 5     Submitted on the opposite strand, also hits gene sasimo 379/390
(97 %)
0 diff
(100 %id)
BP235828 coronary artery .b 1081 to 1672 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BE179919.
matches multiple genes
head_neck .b 1083 to 1513 431 to 1     Submitted on the opposite strand, also hits gene sasimo 431/431
(100 %)
1 diff
(99.8 %id)
DB107484.
matches multiple genes
thymus .b 1091 to 1646 2 to 558   capped also hits gene sasimo 557/557
(100 %)
1 diff
(99.9 %id)
BP265504.
matches multiple genes
thyroid .b 1100 to 1681 1 to 582     also hits gene sasimo 582/582
(100 %)
2 diff
(99.7 %id)
BE179700.
matches multiple genes
head_neck .b 1131 to 1513 383 to 1     Submitted on the opposite strand, also hits gene sasimo 383/383
(100 %)
0 diff
(100 %id)
DA311459 hippocampus .b 1228 to 1799 2 to 574   capped   573/573
(100 %)
5 diff
(99.2 %id)
AU131834.
matches multiple genes
  .b 1244 to 1890 2 to 650   capped also hits gene sasimo 649/650
(99 %)
7 diff
(99.0 %id)
DB245652.
matches multiple genes
uterus, tumor tissue .b 1244 to 1728 2 to 487   capped also hits gene sasimo 486/486
(100 %)
2 diff
(99.6 %id)
AU128517.
matches multiple genes
  .b 1245 to 1686 2 to 443   capped also hits gene sasimo 442/449
(98 %)
1 diff
(99.8 %id)
CN346214.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1254 to 1767 514 to 1     Submitted on the opposite strand, also hits gene sasimo 514/514
(100 %)
2 diff
(99.7 %id)
AW103383.
matches multiple genes
ovary, tumor, 5 pooled (see description) .b 1271 to 1759 489 to 1     also hits gene sasimo 489/489
(100 %)
4 diff
(99.2 %id)
BP249631 Kidney .b 1282 to 1863 1 to 582   tiling clone,   582/583
(99 %)
10 diff
(98.3 %id)
DB527843.
matches multiple genes
testis .b 1308 to 1757 1 to 450     Submitted on the opposite strand, also hits gene sasimo 450/450
(100 %)
2 diff
(99.6 %id)
DB564417.
matches multiple genes
hypothalamus .b 1309 to 1759 1 to 451     Submitted on the opposite strand, also hits gene sasimo 451/452
(99 %)
4 diff
(99.2 %id)
BP264321.
matches multiple genes
small intestine .b 1317 to 1879 1 to 565     also hits gene sasimo 565/565
(100 %)
7 diff
(98.8 %id)
DA615550.
matches multiple genes
  .b 1318 to 1886 2 to 576   capped also hits gene sasimo 575/575
(100 %)
8 diff
(98.7 %id)
BI492842.
matches multiple genes
cochlea, ear .b 1343 to 1740 406 to 9     also hits gene sasimo 398/413
(96 %)
0 diff
(100 %id)
BM311554.
matches multiple genes
Pancreas, Purified pancreatic islet .b 1349 to 1759 411 to 1     also hits gene sasimo 411/411
(100 %)
6 diff
(98.6 %id)
DB534215.
matches multiple genes
hippocampus .b 1350 to 1757 1 to 409     Submitted on the opposite strand, also hits gene sasimo 409/409
(100 %)
6 diff
(98.6 %id)
BG496310.
matches multiple genes
lung, mucoepidermoid carcinoma .b 1350 to 1815 1 to 471     also hits gene sasimo 471/972
(48 %)
12 diff
(98.8 %id)
AA888668.
matches multiple genes
metastatic prostate bone lesion .b 1360 to 1748 408 to 23   AAA also hits gene sasimo 386/414
(93 %)
8 diff
(98.1 %id)
DW411508 Liver .b 1413 to 1725 17 to 329       313/329
(95 %)
11 diff
(96.7 %id)
BQ432948 bone marrow, from acute myelogenous leukemia .b 1515 to 2246 4 to 742       739/805
(91 %)
15 diff
(98.2 %id)
CX785540.
matches multiple genes
human embryonic stem cells .b 1583 to 2417 1 to 841     also hits gene sasimo 841/841
(100 %)
2 diff
(99.8 %id)
BP227443.
matches multiple genes
  .b 1604 to 2181 1 to 583     also hits gene sasimo 583/583
(100 %)
4 diff
(99.4 %id)
BC026887 Prostate, adenocarcinoma. .b 1719 to 3053 674 to 2012   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 1339/2012
(66 %)
6 diff
(99.8 %id)
BI916368 brain .b 1736 to 2341 1 to 585       585/586
(99 %)
14 diff
(97.7 %id)
TI_149304274   .b 1743 to 2372 77 to 708     Submitted on the opposite strand 632/1035
(61 %)
12 diff
(98.9 %id)
BM971203.
matches multiple genes
lung, Primary Lung Epithelial Cells .b 1743 to 2366 17 to 642     Submitted on the opposite strand, also hits gene sasimo 626/643
(97 %)
10 diff
(98.5 %id)
CB215230.
matches multiple genes
normal endometrium, late proliferativephase, cycle day 13, uterus .b 1747 to 2380 1 to 635     also hits gene sasimo 635/635
(100 %)
1 diff
(99.9 %id)
CA395957.
matches multiple genes
eye, RPE/choroid .b 1767 to 2399 1 to 633     also hits gene sasimo 633/633
(100 %)
0 diff
(100 %id)
BG485400.
matches multiple genes
lung .b 1774 to 2590 1 to 797     also hits gene sasimo 797/854
(93 %)
36 diff
(95.8 %id)
BG539733.
matches multiple genes
lung .b 1774 to 2313 1 to 539     also hits gene sasimo 539/548
(98 %)
3 diff
(99.5 %id)
W37945.
matches multiple genes
parathyroid gland, parathyroid tumor .b 1782 to 2374 1 to 590     also hits gene sasimo 590/590
(100 %)
5 diff
(99.2 %id)
BQ614467.
matches multiple genes
insulinoma, Pancreas .b 1793 to 2259 1 to 467     Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 467/467
(100 %)
5 diff
(99.0 %id)
CB112860.
matches multiple genes
Liver .b 1797 to 2270 1 to 474     also hits gene sasimo 474/474
(100 %)
1 diff
(99.8 %id)
BE297234.
matches multiple genes
muscle, rhabdomyosarcoma .b 1803 to 2344 1 to 542     also hits gene sasimo 542/542
(100 %)
0 diff
(100 %id)
BG654397.
matches multiple genes
Pancreas, Purified pancreatic islet .b 1810 to 2062 7 to 259     also hits gene sasimo 253/259
(97 %)
6 diff
(97.7 %id)
DB134563.
matches multiple genes
thymus .b 1826 to 2364 2 to 540   capped also hits gene sasimo 539/539
(100 %)
0 diff
(100 %id)
CN346219.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1833 to 2282 1 to 450     also hits gene sasimo 450/450
(100 %)
1 diff
(99.8 %id)
BF213214.
matches multiple genes
bone marrow, from acute myelogenous leukemia .b 1845 to 2515 1 to 662     also hits gene sasimo 662/883
(74 %)
33 diff
(96.3 %id)
BF103733.
matches multiple genes
embryonal carcinoma, testis .b 1881 to 2522 1 to 631     also hits gene sasimo 631/811
(77 %)
29 diff
(96.5 %id)
H04523.
matches multiple genes
placenta .b 1959 to 2528 1 to 563     also hits gene sasimo 563/568
(99 %)
15 diff
(97.4 %id)
CR739591.
matches multiple genes
placenta .b 1960 to 2266 1 to 307     also hits gene sasimo 307/307
(100 %)
0 diff
(100 %id)
R32724.
matches multiple genes
placenta .b 1960 to 2333 1 to 386     also hits gene sasimo 386/437
(88 %)
15 diff
(96.6 %id)
BG527712.
matches multiple genes
lung, mucoepidermoid carcinoma .b 1970 to 2684 1 to 714     also hits gene sasimo 714/718
(99 %)
7 diff
(99.1 %id)
BG742183.
matches multiple genes
skin .b 1974 to 2703 1 to 725     also hits gene sasimo 725/725
(100 %)
8 diff
(98.9 %id)
BF888784.
matches multiple genes
testis_normal .b 1997 to 2591 1 to 591     also hits gene sasimo 591/609
(97 %)
23 diff
(96.3 %id)
BQ425337.
matches multiple genes
melanotic melanoma, skin .b 2075 to 2876 1 to 820     also hits gene sasimo 820/832
(98 %)
31 diff
(96.3 %id)
BG497033.
matches multiple genes
lung, mucoepidermoid carcinoma .b 2107 to 2751 1 to 638     also hits gene sasimo 638/638
(100 %)
15 diff
(97.7 %id)
BG527568.
matches multiple genes
lung, mucoepidermoid carcinoma .b 2107 to 2922 1 to 819     also hits gene sasimo 819/926
(88 %)
25 diff
(97.4 %id)
CF619004.
matches multiple genes
Pooled Chondrosarcoma Tumor cells .b 2138 to 2792 9 to 666     also hits gene sasimo 658/913
(72 %)
28 diff
(97.0 %id)
DA119150.
matches multiple genes
cerebellum .b 2143 to 2668 2 to 528   capped also hits gene sasimo 527/527
(100 %)
2 diff
(99.7 %id)
AA037174.
matches multiple genes
senescent fibroblast .b 2151 to 2620 1 to 473   fully sequenced, also hits gene sasimo 473/473
(100 %)
7 diff
(98.6 %id)
BF987899.
matches multiple genes
placenta_normal .b 2203 to 2702 33 to 536     also hits gene sasimo 504/536
(94 %)
6 diff
(98.9 %id)
BF368624.
matches multiple genes
placenta_normal .b 2205 to 2751 16 to 562     also hits gene sasimo 547/562
(97 %)
5 diff
(99.2 %id)
TI_149290538.
matches multiple genes
  .b 2218 to 3057 924 to 88   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 837/997
(83 %)
21 diff
(97.9 %id)
BX482285.
matches multiple genes
  .b 2272 to 2883 7 to 618     also hits gene sasimo 612/618
(99 %)
6 diff
(99.1 %id)
BQ374730.
matches multiple genes
testis_normal .b 2334 to 2489 8 to 163     also hits gene sasimo 156/163
(95 %)
6 diff
(96.4 %id)
DV461631.
matches multiple genes
cochlea, ear .b 2347 to 2966 1 to 615     also hits gene sasimo 615/640
(96 %)
32 diff
(95.0 %id)
AA834635.
matches multiple genes
ovary .b 2352 to 2712 1 to 361     also hits gene sasimo 361/361
(100 %)
3 diff
(99.2 %id)
AA278435.
matches multiple genes
germinal center B cell .b 2367 to 2854 1 to 487     also hits gene sasimo 487/487
(100 %)
2 diff
(99.6 %id)
AI346332.
matches multiple genes
adenocarcinoma, colon .b 2471 to 3059 593 to 4     also hits gene sasimo 590/593
(99 %)
0 diff
(100 %id)
AU154269.
matches multiple genes
  .b 2471 to 3053 580 to 1     also hits gene sasimo 580/584
(99 %)
7 diff
(98.9 %id)
AU147006.
matches multiple genes
whole embryo, mainly body .b 2472 to 3053 580 to 1     also hits gene sasimo 580/580
(100 %)
20 diff
(96.6 %id)
BI600932.
matches multiple genes
brain, hypothalamus .b 2538 to 3056 1 to 518     also hits gene sasimo 518/805
(64 %)
11 diff
(98.7 %id)
TI_45214212.
matches multiple genes
  .b 2542 to 3056 116 to 629     also hits gene sasimo 514/916
(56 %)
8 diff
(99.2 %id)
BP263240.
matches multiple genes
small intestine .b 2544 to 3056 1 to 516     also hits gene sasimo 516/585
(88 %)
8 diff
(98.7 %id)
BQ614240.
matches multiple genes
insulinoma, Pancreas .b 2549 to 3057 527 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 509/509
(100 %)
0 diff
(100 %id)
W37883.
matches multiple genes
parathyroid gland, parathyroid tumor .b 2560 to 3059 512 to 2     also hits gene sasimo 511/528
(96 %)
0 diff
(100 %id)
AW470532.
matches multiple genes
carcinoid, lung .b 2563 to 3056 495 to 1     also hits gene sasimo 495/495
(100 %)
3 diff
(99.4 %id)
AI421081.
matches multiple genes
brain, glioblastoma (pooled) .b 2572 to 3059 489 to 2     also hits gene sasimo 488/489
(99 %)
0 diff
(100 %id)
BI438569.
matches multiple genes
Pancreas, Purified pancreatic islet .b 2578 to 3059 485 to 4     also hits gene sasimo 482/485
(99 %)
0 diff
(100 %id)
AI189008.
matches multiple genes
placenta .b 2579 to 3053 475 to 1     also hits gene sasimo 475/475
(100 %)
0 diff
(100 %id)
AI572911.
matches multiple genes
lymph node, lymphoma, follicular mixed small and largecell .b 2579 to 3056 480 to 3     also hits gene sasimo 478/480
(99 %)
0 diff
(100 %id)
CN346212.
matches multiple genes
embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2584 to 3317 1 to 734   tiling clone, also hits gene sasimo 734/734
(100 %)
0 diff
(100 %id)
DB541587.
matches multiple genes
hippocampus .b 2597 to 3053 1 to 457     Submitted on the opposite strand, also hits gene sasimo 457/457
(100 %)
0 diff
(100 %id)
AA810570.
matches multiple genes
germinal center B cell .b 2607 to 3059 456 to 4     also hits gene sasimo 453/456
(99 %)
0 diff
(100 %id)
AA037113.
matches multiple genes
senescent fibroblast .b 2612 to 3039 436 to 1   fully sequenced, also hits gene sasimo 436/436
(100 %)
8 diff
(98.2 %id)
DB545992.
matches multiple genes
hippocampus .b 2613 to 3052 1 to 440     Submitted on the opposite strand, also hits gene sasimo 440/440
(100 %)
0 diff
(100 %id)
AI003721.
matches multiple genes
pineal gland .b 2619 to 3054 436 to 1     also hits gene sasimo 436/436
(100 %)
0 diff
(100 %id)
AI167395.
matches multiple genes
parathyroid gland, parathyroid tumor .b 2624 to 3059 438 to 3     also hits gene sasimo 436/438
(99 %)
0 diff
(100 %id)
BE350679.
matches multiple genes
2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .b 2625 to 3059 436 to 2     also hits gene sasimo 435/436
(99 %)
0 diff
(100 %id)
BF477177.
matches multiple genes
brain, glioblastoma (pooled) .b 2627 to 3056 432 to 3     also hits gene sasimo 430/432
(99 %)
0 diff
(100 %id)
AI351183.
matches multiple genes
pooled germ cell tumors .b 2630 to 3053 435 to 12   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 424/424
(100 %)
0 diff
(100 %id)
AA781601.
matches multiple genes
parathyroid gland, parathyroid tumor .b 2650 to 3056 410 to 4     also hits gene sasimo 407/410
(99 %)
0 diff
(100 %id)
AA452853.
matches multiple genes
  .b 2651 to 3056 406 to 1     also hits gene sasimo 406/406
(100 %)
0 diff
(100 %id)
AA804224.
matches multiple genes
germinal center B cell .b 2676 to 3054 392 to 10     also hits gene sasimo 383/392
(97 %)
0 diff
(100 %id)
AI823846.
matches multiple genes
2 pooled tumors (clear cell type), Kidney .b 2702 to 3059 359 to 2     also hits gene sasimo 358/359
(99 %)
0 diff
(100 %id)
AA713680.
matches multiple genes
germinal center B cell .b 2710 to 3059 357 to 8     also hits gene sasimo 350/357
(98 %)
0 diff
(100 %id)
AA633847.
matches multiple genes
lung .b 2726 to 3052 327 to 1     also hits gene sasimo 327/327
(100 %)
0 diff
(100 %id)
R32725.
matches multiple genes
placenta .b 2737 to 3054 325 to 1     also hits gene sasimo 325/325
(100 %)
11 diff
(96.7 %id)
AI440442.
matches multiple genes
poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2774 to 3053 300 to 21   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 280/280
(100 %)
1 diff
(99.7 %id)
H13172.
matches multiple genes
placenta .b 2775 to 3059 296 to 8     also hits gene sasimo 289/296
(97 %)
0 diff
(100 %id)
DA905869.
matches multiple genes
  .b 2781 to 3333 2 to 554   capped also hits gene sasimo 553/553
(100 %)
1 diff
(99.9 %id)
AI611747.
matches multiple genes
poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2819 to 3062 247 to 4     also hits gene sasimo 244/247
(98 %)
0 diff
(100 %id)
AA278907.
matches multiple genes
germinal center B cell .b 2910 to 3059 151 to 2     also hits gene sasimo 150/151
(99 %)
0 diff
(100 %id)
BU073239.
matches multiple genes
insulinoma, Pancreas .b 2911 to 3053 158 to 16   AAA Submitted on the opposite strand, also hits gene SKIV2L 143/143
(100 %)
0 diff
(100 %id)
DB141082.
matches multiple genes
thymus .b 2919 to 3409 2 to 494   capped also hits gene sasimo 493/493
(100 %)
3 diff
(99.4 %id)
AL041667.
matches multiple genes
testis .b 2930 to 3513 1 to 584   tiling clone, also hits gene sasimo 584/584
(100 %)
2 diff
(99.7 %id)
DA822587.
matches multiple genes
pericardium .b 3046 to 3419 2 to 376   tiling clone, capped also hits gene sasimo 375/375
(100 %)
2 diff
(99.5 %id)
DA870256.
matches multiple genes
Prostate .b 3457 to 3989 2 to 540   tiling clone, capped also hits gene sasimo 539/539
(100 %)
5 diff
(99.1 %id)
AW977938   .b 3704 to 4368 669 to 1   tiling clone, Submitted on the opposite strand 669/673
(99 %)
8 diff
(98.9 %id)
DB268749.
matches multiple genes
uterus .b 3773 to 4202 2 to 432   capped also hits gene sasimo 431/431
(100 %)
5 diff
(98.9 %id)
DA570180.
matches multiple genes
whole embryo, mainly head .b 3806 to 4589 2 to 783   tiling clone, capped also hits gene sasimo 782/782
(100 %)
7 diff
(99.2 %id)
AA811752 germinal center B cell .b 4095 to 4375 286 to 4       283/286
(98 %)
0 diff
(100 %id)
AA830198 germinal center B cell .b 4114 to 4375 267 to 4       264/267
(98 %)
0 diff
(100 %id)
AU145238.
matches multiple genes
whole embryo, mainly head .b 5117 to 5687 567 to 1   tiling clone, also hits gene sasimo 567/572
(99 %)
16 diff
(97.3 %id)
TI_57171168.
matches multiple genes
  .c 1 to 852 39 to 881 R52L S53K E54T D55C L56G ... tiling clone, also hits gene sasimo 845/887
(95 %)
23 diff
(97.5 %id)
CD690132.
matches multiple genes
normal nasopharynx .c 16 to 661 32 to 673     also hits gene sasimo 642/673
(95 %)
7 diff
(99.0 %id)
CD701149.
matches multiple genes
normal nasopharynx .c 16 to 602 23 to 605     also hits gene sasimo 583/605
(96 %)
7 diff
(98.9 %id)
CB121082.
matches multiple genes
Liver .c 199 to 669 1 to 471   tiling clone, also hits gene sasimo 471/471
(100 %)
0 diff
(100 %id)
CN346221.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .c 342 to 637 1 to 296     also hits gene sasimo 296/296
(100 %)
0 diff
(100 %id)
BU599405.
matches multiple genes
mixed (pool of 40 RNAs) .d 1 to 528 8 to 536 R34L S35K E36T D37C L38G ... tiling clone, also hits gene sasimo 782/810
(96 %)
44 diff
(94.6 %id)
TI_57163579.
matches multiple genes
  .e 1 to 763 39 to 798 R56L S57K E58T D59C L60G ... tiling clone, also hits gene sasimo 761/798
(95 %)
10 diff
(98.8 %id)
BX352678.
matches multiple genes
Neuroblastoma Cot 10-normalized .e 8 to 857 1 to 849   tiling clone, also hits gene sasimo 849/849
(100 %)
3 diff
(99.7 %id)
CB996196.
matches multiple genes
placenta, pre-eclamptic placenta .e 29 to 606 28 to 606     also hits gene sasimo 579/931
(62 %)
22 diff
(97.7 %id)
CB996290.
matches multiple genes
placenta, pre-eclamptic placenta .e 29 to 687 28 to 688   AAA also hits gene sasimo 661/810
(81 %)
20 diff
(97.6 %id)
BU928568.
matches multiple genes
brain, glioblastoma .e 30 to 681 1 to 655     also hits gene sasimo 655/722
(90 %)
10 diff
(98.7 %id)
BX509477.
matches multiple genes
  .e 31 to 716 1 to 686     also hits gene sasimo 686/686
(100 %)
2 diff
(99.8 %id)
DN990200.
matches multiple genes
brain, whole brain .e 31 to 646 8 to 619     also hits gene sasimo 612/619
(98 %)
6 diff
(99.1 %id)
BM921276.
matches multiple genes
pooled brain, lung, testis .e 40 to 1079 1 to 1038   tiling clone, also hits gene sasimo 1038/1038
(100 %)
28 diff
(97.4 %id)
CN349870.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 52 to 642 1 to 591     also hits gene sasimo 591/591
(100 %)
2 diff
(99.7 %id)
BF691855.
matches multiple genes
melanotic melanoma, high MDR, skin .e 57 to 763 1 to 702     also hits gene sasimo 700/767
(91 %)
22 diff
(97.2 %id)
BI830622.
matches multiple genes
brain, medulla .f 1 to 848 3 to 845 R126T R127E R128E S129I R130K ... tiling clone, also hits gene sasimo 845/851
(99 %)
17 diff
(98.1 %id)
BI562327.
matches multiple genes
testis .f 1 to 658 1 to 659     also hits gene sasimo 655/661
(99 %)
34 diff
(94.9 %id)
DB158378.
matches multiple genes
thymus .f 3 to 597 2 to 596   capped also hits gene sasimo 595/595
(100 %)
0 diff
(100 %id)
DA670836.
matches multiple genes
  .f 11 to 601 2 to 592   capped also hits gene sasimo 591/591
(100 %)
0 diff
(100 %id)
DA527339.
matches multiple genes
brain .f 15 to 611 2 to 598   capped also hits gene sasimo 597/597
(100 %)
0 diff
(100 %id)
DA616034.
matches multiple genes
  .f 17 to 600 2 to 585   capped also hits gene sasimo 584/584
(100 %)
0 diff
(100 %id)
BM456685.
matches multiple genes
lymph, lymphoma, cell line .f 19 to 618 1 to 602     also hits gene sasimo 602/1068
(56 %)
12 diff
(98.9 %id)
BE268707.
matches multiple genes
Burkitt lymphoma, lymph .f 33 to 668 1 to 635   tiling clone, also hits gene sasimo 635/662
(95 %)
11 diff
(98.4 %id)
CX752832.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 36 to 723 1 to 675     Submitted on the opposite strand, also hits gene sasimo 675/747
(90 %)
34 diff
(95.5 %id)
DA342625.
matches multiple genes
substantia nigra .f 37 to 599 2 to 564   capped also hits gene sasimo 563/563
(100 %)
0 diff
(100 %id)
DA396301.
matches multiple genes
thalamus .f 39 to 616 2 to 579   capped also hits gene sasimo 578/578
(100 %)
0 diff
(100 %id)
DA607934.
matches multiple genes
  .f 57 to 679 2 to 623   tiling clone, capped also hits gene sasimo 622/622
(100 %)
1 diff
(99.9 %id)
DA468008.
matches multiple genes
cord Blood .f 60 to 615 2 to 557   capped also hits gene sasimo 556/556
(100 %)
0 diff
(100 %id)
DA693317.
matches multiple genes
  .f 60 to 599 2 to 541   capped also hits gene sasimo 540/540
(100 %)
0 diff
(100 %id)
BM544074.
matches multiple genes
ovary (pool of 3) .g 1 to 888 21 to 907 R56L S57K E58T D59C L60G ... tiling clone, also hits gene sasimo 887/1114
(79 %)
16 diff
(98.6 %id)
CD699097.
matches multiple genes
normal nasopharynx .g 27 to 466 35 to 471     also hits gene sasimo 437/471
(92 %)
8 diff
(98.4 %id)
CD710007.
matches multiple genes
normal nasopharynx .g 27 to 227 34 to 230     also hits gene sasimo 197/230
(85 %)
6 diff
(97.4 %id)
CB996044 placenta, pre-eclamptic placenta .g 27 to 599 28 to 600       573/714
(80 %)
16 diff
(97.8 %id)
DB471245.
matches multiple genes
hippocampus .g 30 to 499 1 to 470     also hits gene sasimo 470/470
(100 %)
3 diff
(99.4 %id)
DB504956.
matches multiple genes
hypothalamus .g 30 to 510 1 to 481     also hits gene sasimo 481/481
(100 %)
3 diff
(99.4 %id)
CN483336.
matches multiple genes
eye .h 1 to 587 4 to 590 R56L S57K E58T D59C L60G ... tiling clone, also hits gene sasimo 590/590
(100 %)
2 diff
(99.7 %id)
DB027325.
matches multiple genes
testis .i 1 to 515 2 to 517   tiling clone, capped also hits gene sasimo 516/516
(100 %)
1 diff
(99.9 %id)
NM_006625.4.
matches multiple genes
  .i 464 to 2437 1 to 1974 exact RefSeq, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 1974/1974
(100 %)
0 diff
(100 %id)
BG715788.
matches multiple genes
brain, hypothalamus .i 532 to 1218 1 to 705   tiling clone, also hits gene sasimo 701/705
(99 %)
23 diff
(96.8 %id)
BU147379.
matches multiple genes
brain, neuroblastoma, cell line .i 551 to 1447 1 to 911 S123K R155A S156Y R157Q S158K ...   also hits gene sasimo 909/911
(99 %)
26 diff
(97.2 %id)
BE281165.
matches multiple genes
choriocarcinoma, placenta .i 556 to 1290 14 to 746 S156*   also hits gene sasimo 729/786
(92 %)
14 diff
(98.3 %id)
BM836931.
matches multiple genes
Ascites, stomach .i 565 to 1186 1 to 622     also hits gene sasimo 622/622
(100 %)
0 diff
(100 %id)
BC001107.
matches multiple genes
Placenta, choriocarcinoma .i 571 to 1424 1 to 854 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 854/854
(100 %)
0 diff
(100 %id)
BI836024.
matches multiple genes
pooled pancreas and spleen .i 571 to 1330 1 to 761 exact   also hits gene sasimo 761/761
(100 %)
4 diff
(99.5 %id)
DR760484.
matches multiple genes
embryonic stem .i 571 to 1367 1 to 797 exact   also hits gene sasimo 797/797
(100 %)
0 diff
(100 %id)
CV810565.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .i 575 to 1300 1 to 725 exact   also hits gene sasimo 725/725
(100 %)
3 diff
(99.6 %id)
DR000930.
matches multiple genes
fetal brain .i 583 to 1223 1 to 645 exact   also hits gene sasimo 641/645
(99 %)
5 diff
(99.3 %id)
BX442925.
matches multiple genes
B cells (Ramos cell line) .i 587 to 1560 1 to 963 C77X E82X S156X R157G   also hits gene sasimo 963/963
(100 %)
14 diff
(98.6 %id)
BM467160.
matches multiple genes
duodenal adenocarcinoma, cell line, small intestine .i 587 to 1215 1 to 630     also hits gene sasimo 630/1229
(51 %)
9 diff
(99.3 %id)
DA240983.
matches multiple genes
brain .i 595 to 1187 2 to 593   capped also hits gene sasimo 592/592
(100 %)
2 diff
(99.7 %id)
AF419331   .i 596 to 4073 1 to 3478 exact tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 3478/3478
(100 %)
0 diff
(100 %id)
DA043556.
matches multiple genes
bladder .i 599 to 1170 2 to 574   capped also hits gene sasimo 573/573
(100 %)
1 diff
(99.9 %id)
DA071971.
matches multiple genes
cerebellum .i 599 to 1193 2 to 596   capped also hits gene sasimo 595/595
(100 %)
0 diff
(100 %id)
BG532282.
matches multiple genes
embryonal carcinoma, testis .i 599 to 1294 1 to 699 N146K S147Q R148*   also hits gene sasimo 699/699
(100 %)
10 diff
(98.6 %id)
AK001286.
matches multiple genes
  .i 600 to 2437 1 to 1836 exact tiling clone, available from FLJ, also hits gene sasimo 1836/1836
(100 %)
2 diff
(99.9 %id)
CD702190 normal nasopharynx .i 600 to 933 36 to 369       330/369
(89 %)
11 diff
(97.1 %id)
DA038777.
matches multiple genes
  .i 601 to 1166 2 to 568   capped also hits gene sasimo 567/567
(100 %)
1 diff
(99.9 %id)
AU126176.
matches multiple genes
  .i 601 to 1466 2 to 874 R117G R118X R120T R130X R139X ... capped also hits gene sasimo 873/880
(99 %)
43 diff
(95.2 %id)
DA738182.
matches multiple genes
  .i 601 to 1480 2 to 880 exact capped also hits gene sasimo 879/884
(99 %)
7 diff
(99.3 %id)
BE958633.
matches multiple genes
brain, primitive neuroectoderm .i 605 to 1048 1 to 445     also hits gene sasimo 445/445
(100 %)
6 diff
(98.7 %id)
CN346224.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .i 606 to 909 1 to 304     also hits gene sasimo 304/304
(100 %)
2 diff
(99.4 %id)
BE907505.
matches multiple genes
epithelioid carcinoma, Pancreas .i 609 to 1343 1 to 737 S2V N9T T10R S11L L12C ...   also hits gene sasimo 737/893
(82 %)
32 diff
(96.5 %id)
CX756490.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .i 613 to 1327 1 to 715 exact   Submitted on the opposite strand, also hits gene sasimo 715/715
(100 %)
0 diff
(100 %id)
BG400245.
matches multiple genes
Kidney .i 615 to 1270 1 to 665 E29D F53L A54L Y55M V56F ...   also hits gene sasimo 665/665
(100 %)
32 diff
(95.2 %id)
BU198294   .i 616 to 1089 1 to 474       474/554
(85 %)
9 diff
(98.4 %id)
DA765624.
matches multiple genes
tongue .i 616 to 1193 2 to 579   capped also hits gene sasimo 578/578
(100 %)
0 diff
(100 %id)
BX363934.
matches multiple genes
  .i 617 to 1588 1 to 964 S156X R157E fully sequenced, also hits gene sasimo 964/964
(100 %)
5 diff
(99.5 %id)
BG622677.
matches multiple genes
placenta .i 617 to 1247 1 to 637 T21I R22L S23V E24*   also hits gene sasimo 633/637
(99 %)
11 diff
(98.3 %id)
BE613485.
matches multiple genes
leiomyosarcoma, uterus .i 618 to 1263 1 to 643 F30L G31V R32V Y33M G34V ...   also hits gene sasimo 643/643
(100 %)
5 diff
(99.3 %id)
CN346217.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .i 619 to 984 1 to 366     also hits gene sasimo 366/366
(100 %)
0 diff
(100 %id)
TI_57236591.
matches multiple genes
  .i 619 to 1430 24 to 846 F13Y L26Y R27A R28A E29*   also hits gene sasimo 823/1020
(80 %)
30 diff
(97.1 %id)
DA812249.
matches multiple genes
ovary, tumor tissue .i 621 to 1439 2 to 834 R148I capped also hits gene sasimo 833/834
(99 %)
22 diff
(97.4 %id)
AA310374.
matches multiple genes
  .i 622 to 1130 1 to 510     also hits gene sasimo 510/510
(100 %)
2 diff
(99.7 %id)
DA062350.
matches multiple genes
cerebellum .i 624 to 1195 2 to 573   capped also hits gene sasimo 572/572
(100 %)
0 diff
(100 %id)
BI908014.
matches multiple genes
leukocyte .i 625 to 1430 1 to 817 F13Y L26Y R27A R28A E29*   also hits gene sasimo 817/991
(82 %)
26 diff
(97.4 %id)
AA353545.
matches multiple genes
  .i 627 to 900 1 to 274     also hits gene sasimo 274/275
(99 %)
3 diff
(99.0 %id)
DA817160.
matches multiple genes
  .i 630 to 1198 2 to 570   capped also hits gene sasimo 569/569
(100 %)
0 diff
(100 %id)
BQ948812.
matches multiple genes
leiomyosarcoma, uterus .i 633 to 1403 1 to 783 R120T Y173H S174R   also hits gene sasimo 783/963
(81 %)
38 diff
(96.1 %id)
BY996827   .i 640 to 1262 30 to 651 R3L     622/651
(95 %)
6 diff
(99.1 %id)
DB096910.
matches multiple genes
testis .i 640 to 1213 2 to 575   capped also hits gene sasimo 574/574
(100 %)
0 diff
(100 %id)
AF047448.
matches multiple genes
leukemia .i 643 to 1263 1 to 620 exact   also hits gene sasimo 620/620
(100 %)
2 diff
(99.7 %id)
DA024790.
matches multiple genes
  .i 643 to 1140 2 to 501   capped also hits gene sasimo 500/500
(100 %)
2 diff
(99.6 %id)
DB464582.
matches multiple genes
hippocampus .i 643 to 1051 1 to 408     also hits gene sasimo, toreybu, vymorbo 408/408
(100 %)
7 diff
(98.3 %id)
DB493749.
matches multiple genes
hypothalamus .i 643 to 1159 1 to 517     also hits gene sasimo 517/517
(100 %)
2 diff
(99.7 %id)
DA288279.
matches multiple genes
corpus callosum .i 644 to 1202 2 to 560   capped also hits gene sasimo 559/559
(100 %)
0 diff
(100 %id)
DA458062.
matches multiple genes
tongue, tumor tissue .i 644 to 1236 2 to 594 exact capped also hits gene sasimo 593/593
(100 %)
0 diff
(100 %id)
DA635264.
matches multiple genes
Kidney .i 644 to 1233 2 to 591 exact capped also hits gene sasimo 590/590
(100 %)
0 diff
(100 %id)
DA668468.
matches multiple genes
esophagus .i 644 to 1197 2 to 556   capped also hits gene sasimo 555/555
(100 %)
1 diff
(99.9 %id)
DA851555.
matches multiple genes
placenta .i 644 to 1222 2 to 580   capped also hits gene sasimo 579/579
(100 %)
0 diff
(100 %id)
DB148187.
matches multiple genes
thymus .i 644 to 906 2 to 264   capped also hits gene sasimo 263/263
(100 %)
0 diff
(100 %id)
CX782628.
matches multiple genes
human embryonic stem cells .i 657 to 1505 1 to 848 exact   Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 848/848
(100 %)
1 diff
(99.9 %id)
AY150181.
matches multiple genes
  .i 658 to 1396 1 to 739 exact   also hits gene sasimo 739/739
(100 %)
0 diff
(100 %id)
BQ929716.
matches multiple genes
leiomyosarcoma, uterus .i 661 to 1464 1 to 813 S180X K182X   also hits gene sasimo 813/938
(86 %)
20 diff
(97.9 %id)
TI_1948083829   .i 671 to 1158 153 to 645   AAA   493/537
(91 %)
24 diff
(95.6 %id)
TI_1948089279.
matches multiple genes
  .i 671 to 1222 130 to 679     also hits gene sasimo 550/1053
(52 %)
19 diff
(98.2 %id)
TI_1948089479.
matches multiple genes
  .i 671 to 1218 130 to 678     also hits gene sasimo 549/1071
(51 %)
8 diff
(99.3 %id)
TI_1948089666.
matches multiple genes
  .i 671 to 915 135 to 379   fully sequenced, also hits gene sasimo 245/272
(90 %)
6 diff
(97.8 %id)
TI_1948089844   .i 671 to 1162 130 to 621       492/1082
(45 %)
11 diff
(99.0 %id)
TI_1948089846.
matches multiple genes
  .i 671 to 1222 684 to 128     also hits gene sasimo 557/1144
(48 %)
18 diff
(98.5 %id)
CV025730.
matches multiple genes
mixed .i 672 to 1222 1 to 551     also hits gene sasimo 551/645
(85 %)
1 diff
(99.9 %id)
CV026943.
matches multiple genes
mixed .i 672 to 980 1 to 309     also hits gene sasimo 309/309
(100 %)
1 diff
(99.7 %id)
TI_1948085550   .i 673 to 1160 133 to 622       490/1350
(36 %)
18 diff
(98.7 %id)
BF665061.
matches multiple genes
brain, primitive neuroectoderm .i 762 to 1446 1 to 673     also hits gene sasimo 673/680
(98 %)
25 diff
(96.4 %id)
BG403924.
matches multiple genes
bladder, transitional cell papilloma, cell line .i 792 to 1423 1 to 627   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 627/627
(100 %)
5 diff
(99.3 %id)
BQ652737.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .i 792 to 1475 18 to 714     also hits gene sasimo 697/990
(70 %)
35 diff
(96.5 %id)
BM928059.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .i 793 to 1738 1 to 958     also hits gene sasimo 958/1035
(92 %)
30 diff
(97.2 %id)
DR762483.
matches multiple genes
embryonic stem .i 862 to 1696 7 to 853     also hits gene sasimo 859/853
(100 %)
56 diff
(93.5 %id)
TI_1948089281.
matches multiple genes
  .i 877 to 1222 473 to 128     also hits gene sasimo 346/373
(92 %)
0 diff
(100 %id)
TI_1948089667.
matches multiple genes
  .i 885 to 1222 466 to 129   fully sequenced, also hits gene sasimo 338/365
(92 %)
0 diff
(100 %id)
TI_1948089481.
matches multiple genes
  .i 904 to 1222 446 to 128     also hits gene sasimo 319/346
(92 %)
0 diff
(100 %id)
T36200.
matches multiple genes
thyroid gland .i 966 to 1319 1 to 354     also hits gene sasimo 354/354
(100 %)
4 diff
(98.9 %id)
AA768497.
matches multiple genes
germinal center B cell .i 1017 to 1423 417 to 11   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 407/407
(100 %)
0 diff
(100 %id)
BX326041.
matches multiple genes
Neuroblastoma Cot 10-normalized .i 1061 to 1927 866 to 1     also hits gene sasimo 866/866
(100 %)
10 diff
(98.9 %id)
BF218179.
matches multiple genes
brain, glioblastoma .i 1104 to 1786 1 to 685     also hits gene sasimo 685/685
(100 %)
23 diff
(96.7 %id)
Z42011.
matches multiple genes
brain, total brain .i 1128 to 1398 1 to 271     also hits gene sasimo 271/271
(100 %)
2 diff
(99.3 %id)
H17581.
matches multiple genes
whole brain .i 1130 to 1514 1 to 390     also hits gene sasimo 390/390
(100 %)
10 diff
(97.5 %id)
BG500927.
matches multiple genes
adenocarcinoma, Prostate .i 1156 to 1890 1 to 750     also hits gene sasimo 750/894
(83 %)
35 diff
(96.1 %id)
CN349868.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .i 1174 to 1904 1 to 732     also hits gene sasimo 732/732
(100 %)
4 diff
(99.5 %id)
AW579308.
matches multiple genes
denis_drash .i 1220 to 1771 9 to 560     also hits gene sasimo 552/560
(98 %)
6 diff
(99.0 %id)
BX450317.
matches multiple genes
brain, fetal brain .i 1224 to 2089 10 to 871     also hits gene sasimo 862/871
(98 %)
20 diff
(97.8 %id)
BG611131.
matches multiple genes
adenocarcinoma, Prostate .i 1250 to 1970 1 to 722     also hits gene sasimo 722/788
(91 %)
8 diff
(99.0 %id)
BF244615.
matches multiple genes
brain, glioblastoma .i 1275 to 1952 1 to 674     also hits gene sasimo 674/1017
(66 %)
21 diff
(98.0 %id)
BU621746.
matches multiple genes
cell lines, Chondrosarcoma .i 1276 to 1927 670 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 652/652
(100 %)
0 diff
(100 %id)
AA370324.
matches multiple genes
Prostate .i 1285 to 1574 1 to 290     also hits gene sasimo 290/290
(100 %)
0 diff
(100 %id)
CD512033.
matches multiple genes
Pooled-Skin .i 1289 to 2018 1 to 736     also hits gene sasimo 736/871
(84 %)
14 diff
(98.4 %id)
BX356666.
matches multiple genes
Placenta Cot 25-normalized .i 1294 to 2399 1098 to 1     also hits gene sasimo 1098/1146
(95 %)
18 diff
(98.5 %id)
BX450740.
matches multiple genes
B cells (Ramos cell line) .i 1338 to 2265 1 to 925     also hits gene sasimo 925/925
(100 %)
13 diff
(98.6 %id)
BX408797.
matches multiple genes
brain, fetal brain .i 1358 to 2197 1 to 850     also hits gene sasimo 850/895
(94 %)
36 diff
(96.0 %id)
AA491034.
matches multiple genes
germinal center B cell .i 1368 to 1598 1 to 231     also hits gene sasimo 231/231
(100 %)
0 diff
(100 %id)
BM856861.
matches multiple genes
stomach .i 1390 to 1627 1 to 237     also hits gene sasimo 237/237
(100 %)
1 diff
(99.6 %id)
BF207617.
matches multiple genes
bladder, carcinoma, cell line .i 1431 to 2055 39 to 652     also hits gene sasimo 614/652
(94 %)
6 diff
(99.1 %id)
AA465276.
matches multiple genes
germinal center B cell .i 1461 to 1676 1 to 216     also hits gene sasimo 216/216
(100 %)
1 diff
(99.6 %id)
N42006.
matches multiple genes
placenta .i 1477 to 1775 1 to 299     also hits gene sasimo 299/299
(100 %)
2 diff
(99.4 %id)
BQ421218.
matches multiple genes
embryonal carcinoma, cell line, testis .i 1507 to 2383 1 to 879     also hits gene sasimo 879/879
(100 %)
21 diff
(97.7 %id)
BF107041.
matches multiple genes
placenta .i 1541 to 2130 1 to 584     also hits gene sasimo 584/586
(99 %)
10 diff
(98.3 %id)
BX363933.
matches multiple genes
  .i 1558 to 2382 830 to 11   tiling clone, fully sequenced, also hits gene sasimo 820/830
(98 %)
7 diff
(99.2 %id)
BX392494.
matches multiple genes
Placenta Cot 25-normalized .i 1571 to 2431 867 to 4     also hits gene sasimo 864/867
(99 %)
0 diff
(100 %id)
TI_149294799.
matches multiple genes
  .i 1647 to 2437 866 to 81   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 786/951
(82 %)
13 diff
(98.7 %id)
TI_157614342   .i 1649 to 2158 606 to 97   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 510/510
(100 %)
17 diff
(96.7 %id)
BX331533.
matches multiple genes
Neuroblastoma Cot 10-normalized .i 1660 to 2388 729 to 1     also hits gene sasimo 729/729
(100 %)
19 diff
(97.4 %id)
AU130178.
matches multiple genes
  .i 1660 to 2517 2 to 856   tiling clone, capped also hits gene sasimo 855/857
(99 %)
7 diff
(99.2 %id)
BE614311.
matches multiple genes
leiomyosarcoma, uterus .i 1696 to 2385 708 to 1     also hits gene sasimo 708/952
(74 %)
37 diff
(96.2 %id)
CX782554.
matches multiple genes
human embryonic stem cells .i 1700 to 2435 761 to 26   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 736/736
(100 %)
0 diff
(100 %id)
W32026.
matches multiple genes
parathyroid gland, parathyroid tumor .i 1705 to 2116 1 to 413     also hits gene sasimo 413/418
(98 %)
2 diff
(99.6 %id)
AU129402.
matches multiple genes
  .i 1713 to 2594 2 to 882   capped also hits gene sasimo 881/881
(100 %)
35 diff
(96.1 %id)
DB255138.
matches multiple genes
uterus .i 1714 to 2219 2 to 507   capped also hits gene sasimo 506/506
(100 %)
0 diff
(100 %id)
DA516626.
matches multiple genes
brain .i 1728 to 2264 2 to 540   capped also hits gene sasimo 539/539
(100 %)
3 diff
(99.5 %id)
BU683427.
matches multiple genes
lung .i 1744 to 2437 710 to 17   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 694/694
(100 %)
1 diff
(99.9 %id)
BG032491.
matches multiple genes
breast, mammary adenocarcinoma, cell line .i 1745 to 2436 1 to 693     also hits gene sasimo 693/711
(97 %)
5 diff
(99.3 %id)
T06619.
matches multiple genes
  .i 1758 to 2052 295 to 1     also hits gene sasimo 295/295
(100 %)
2 diff
(99.4 %id)
R81748.
matches multiple genes
placenta .i 1770 to 2136 1 to 371     also hits gene sasimo 371/371
(100 %)
8 diff
(97.9 %id)
BU742938.
matches multiple genes
eye, fetal eye .i 1776 to 2437 679 to 17   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base), also hits gene sasimo 663/663
(100 %)
1 diff
(99.9 %id)
BX331220 Neuroblastoma Cot 10-normalized .i 1814 to 2424 611 to 1       611/814
(75 %)
65 diff
(92.1 %id)
CF528414.
matches multiple genes
placenta .i 1826 to 2158 351 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 333/333
(100 %)
0 diff
(100 %id)
BF243000.
matches multiple genes
bone marrow, from acute myelogenous leukemia .i 1835 to 2435 1 to 610     also hits gene sasimo 610/911
(66 %)
24 diff
(97.4 %id)
BU581682.
matches multiple genes
Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .i 1855 to 2331 1 to 477     also hits gene sasimo 477/477
(100 %)
2 diff
(99.6 %id)
DN912439.
matches multiple genes
  .i 1870 to 2141 272 to 1     also hits gene sasimo 272/272
(100 %)
2 diff
(99.3 %id)
AU150821   .i 1877 to 2437 559 to 1       559/559
(100 %)
10 diff
(98.3 %id)
DB370782.
matches multiple genes
  .i 1879 to 2437 555 to 1     also hits gene sasimo 555/568
(97 %)
17 diff
(97.1 %id)
DB371583.
matches multiple genes
ovary, tumor tissue .i 1879 to 2437 555 to 1     also hits gene sasimo 555/559
(99 %)
20 diff
(96.5 %id)
BU689661.
matches multiple genes
Human Lung Epithelial cells, lung .i 1884 to 2437 570 to 17   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 554/563
(98 %)
0 diff
(100 %id)
BJ993656.
matches multiple genes
hepatoblastoma .i 1888 to 2416 529 to 1     also hits gene sasimo 529/529
(100 %)
20 diff
(96.3 %id)
DB336696.
matches multiple genes
testis .i 1904 to 2435 534 to 3     also hits gene sasimo 532/534
(99 %)
0 diff
(100 %id)
BU581360.
matches multiple genes
Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .i 1932 to 2437 517 to 12   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 506/506
(100 %)
4 diff
(99.3 %id)
AI760410.
matches multiple genes
colon, colon tumor, RER+ .i 1945 to 2437 514 to 22   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 493/493
(100 %)
0 diff
(100 %id)
BF512532.
matches multiple genes
  .i 1949 to 2437 504 to 16   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 489/489
(100 %)
0 diff
(100 %id)
AA808243.
matches multiple genes
germinal center B cell .i 1953 to 2437 502 to 18   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 485/490
(98 %)
3 diff
(99.4 %id)
DB576221.
matches multiple genes
hypothalamus .i 1955 to 2435 1 to 481     Submitted on the opposite strand, also hits gene sasimo 481/481
(100 %)
0 diff
(100 %id)
AW004901.
matches multiple genes
poorly differentiated adenocarcinoma withsignet ring cell features, stomach .i 1955 to 2441 494 to 8     also hits gene sasimo 487/494
(98 %)
0 diff
(100 %id)
AI138218.
matches multiple genes
placenta .i 1968 to 2436 469 to 1     also hits gene sasimo 469/469
(100 %)
1 diff
(99.8 %id)
AI799527.
matches multiple genes
ovary, tumor, 5 pooled (see description) .i 1970 to 2435 466 to 1     also hits gene sasimo 466/466
(100 %)
2 diff
(99.6 %id)
AA354957   .i 1971 to 2291 1 to 330       330/356
(92 %)
12 diff
(96.7 %id)
DB520477.
matches multiple genes
testis .i 1985 to 2435 1 to 451     Submitted on the opposite strand, also hits gene sasimo 451/451
(100 %)
0 diff
(100 %id)
DB529835.
matches multiple genes
hippocampus .i 2000 to 2437 1 to 439     Submitted on the opposite strand, also hits gene sasimo 439/439
(100 %)
1 diff
(99.8 %id)
AI433568.
matches multiple genes
lymph node, lymphoma, follicular mixed small and largecell .i 2000 to 2436 437 to 1     also hits gene sasimo 437/437
(100 %)
0 diff
(100 %id)
AI990218.
matches multiple genes
pooled germ cell tumors .i 2005 to 2441 442 to 6     also hits gene sasimo 437/442
(98 %)
0 diff
(100 %id)
AW471486.
matches multiple genes
colon, moderately-differentiated adenocarcinoma .i 2007 to 2432 426 to 1     also hits gene sasimo 426/426
(100 %)
0 diff
(100 %id)
DB548452.
matches multiple genes
hippocampus .i 2009 to 2437 1 to 429     Submitted on the opposite strand, also hits gene sasimo 429/429
(100 %)
0 diff
(100 %id)
DB547222.
matches multiple genes
hippocampus .i 2011 to 2435 1 to 425     Submitted on the opposite strand, also hits gene sasimo 425/425
(100 %)
1 diff
(99.8 %id)
BX114132.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .i 2017 to 2432 430 to 15   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 416/416
(100 %)
0 diff
(100 %id)
AI811480.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .i 2027 to 2432 406 to 1     also hits gene sasimo 406/406
(100 %)
0 diff
(100 %id)
BE350108.
matches multiple genes
2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .i 2027 to 2437 411 to 1     also hits gene sasimo 411/411
(100 %)
0 diff
(100 %id)
AI630911.
matches multiple genes
moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .i 2028 to 2437 420 to 11   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 410/410
(100 %)
0 diff
(100 %id)
AI952909.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .i 2029 to 2435 427 to 21   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 407/407
(100 %)
2 diff
(99.6 %id)
AW195273.
matches multiple genes
myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .i 2033 to 2437 406 to 1     also hits gene sasimo 406/406
(100 %)
4 diff
(99.1 %id)
N30285.
matches multiple genes
placenta .i 2036 to 2438 409 to 1   tiling clone, also hits gene sasimo 409/505
(80 %)
9 diff
(98.3 %id)
AI160781.
matches multiple genes
placenta .i 2039 to 2435 419 to 23   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 397/397
(100 %)
1 diff
(99.8 %id)
AA609115.
matches multiple genes
  .i 2043 to 2440 398 to 1     also hits gene sasimo 398/398
(100 %)
0 diff
(100 %id)
BF196231.
matches multiple genes
carcinoid, lung .i 2044 to 2435 413 to 22   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 392/392
(100 %)
9 diff
(97.8 %id)
BQ221877.
matches multiple genes
embryonal carcinoma, cell line, testis .i 2047 to 2865 1 to 840     also hits gene sasimo 840/962
(87 %)
39 diff
(96.0 %id)
AA642812 alveolar rhabdomyosarcoma .i 2057 to 2438 1 to 382       382/404
(94 %)
5 diff
(98.8 %id)
AA804205.
matches multiple genes
germinal center B cell .i 2060 to 2432 397 to 25   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 373/373
(100 %)
0 diff
(100 %id)
AA465162.
matches multiple genes
germinal center B cell .i 2062 to 2434 373 to 1     also hits gene sasimo 373/373
(100 %)
0 diff
(100 %id)
AA649191.
matches multiple genes
germinal center B cell .i 2063 to 2437 385 to 11   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 375/375
(100 %)
0 diff
(100 %id)
AA652028 alveolar rhabdomyosarcoma .i 2063 to 2437 38 to 413   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 376/413
(91 %)
6 diff
(98.6 %id)
AA651965 alveolar rhabdomyosarcoma .i 2063 to 2437 36 to 410   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 375/410
(91 %)
6 diff
(98.6 %id)
BM148722 leukopheresis .i 2065 to 2432 384 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 367/408
(89 %)
0 diff
(100 %id)
AI016352.
matches multiple genes
  .i 2067 to 2441 375 to 1     also hits gene sasimo 375/375
(100 %)
0 diff
(100 %id)
AI377027.
matches multiple genes
  .i 2067 to 2435 369 to 1     also hits gene sasimo 369/369
(100 %)
0 diff
(100 %id)
BQ326160.
matches multiple genes
colon_normal .i 2070 to 2215 145 to 1     also hits gene sasimo 145/145
(100 %)
2 diff
(98.7 %id)
AA857373 ovary .i 2078 to 2331 258 to 5       254/262
(96 %)
0 diff
(100 %id)
AA856964 ovary .i 2078 to 2331 258 to 5       254/262
(96 %)
0 diff
(100 %id)
AI890097.
matches multiple genes
moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .i 2078 to 2433 358 to 3     also hits gene sasimo 356/358
(99 %)
0 diff
(100 %id)
AA813871.
matches multiple genes
germinal center B cell .i 2088 to 2415 328 to 1     also hits gene sasimo 328/328
(100 %)
0 diff
(100 %id)
AI968506.
matches multiple genes
adenocarcinoma, Pancreas .i 2096 to 2437 342 to 1     also hits gene sasimo 342/342
(100 %)
0 diff
(100 %id)
D12410.
matches multiple genes
Liver .i 2104 to 2437 16 to 352     also hits gene sasimo 337/352
(95 %)
5 diff
(98.6 %id)
BE242209.
matches multiple genes
leukopheresis .i 2109 to 2437 329 to 1     also hits gene sasimo 329/329
(100 %)
8 diff
(97.6 %id)
AA476860.
matches multiple genes
ovarian tumor, ovary .i 2120 to 2406 286 to 1     Submitted on the opposite strand, also hits gene sasimo 286/286
(100 %)
1 diff
(99.7 %id)
Z38297.
matches multiple genes
brain, total brain .i 2169 to 2437 269 to 1     also hits gene sasimo 269/269
(100 %)
0 diff
(100 %id)
AW518247.
matches multiple genes
lymph node, lymphoma, follicular mixed small and largecell .i 2174 to 2440 267 to 1     also hits gene sasimo 267/267
(100 %)
0 diff
(100 %id)
AW518255.
matches multiple genes
lymph node, lymphoma, follicular mixed small and largecell .i 2176 to 2440 265 to 1     also hits gene sasimo 265/265
(100 %)
1 diff
(99.7 %id)
T96262.
matches multiple genes
lung .i 2185 to 2437 266 to 14     also hits gene PLEK, sasimo 253/277
(91 %)
0 diff
(100 %id)
AI290396.
matches multiple genes
placenta .i 2213 to 2440 228 to 1     also hits gene sasimo 228/228
(100 %)
0 diff
(100 %id)
AW028980 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .i 2220 to 2441 232 to 11       222/232
(95 %)
0 diff
(100 %id)
AW843156 colon_normal .i 2226 to 2362 146 to 9       138/146
(94 %)
0 diff
(100 %id)
AI568133 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .i 2240 to 2437 198 to 1       198/200
(99 %)
0 diff
(100 %id)
EC515395 Prostate .i 2270 to 2371 1 to 101       101/102
(99 %)
2 diff
(98.1 %id)
AA598820   .i 2357 to 2437 81 to 1       81/81
(100 %)
0 diff
(100 %id)
BG387591.
matches multiple genes
embryonal carcinoma, cell line, testis .i 2623 to 3330 1 to 705     also hits gene sasimo 705/711
(99 %)
16 diff
(97.8 %id)
BF239623 bone marrow, from chronic myelogenous leukemia .i 2854 to 3409 1 to 557       557/557
(100 %)
35 diff
(93.8 %id)
AA362166.
matches multiple genes
  .i 2967 to 3369 1 to 403     Submitted on the opposite strand, also hits gene sasimo 403/403
(100 %)
6 diff
(98.6 %id)
BX442924.
matches multiple genes
B cells (Ramos cell line) .i 2996 to 4053 1055 to 3     also hits gene sasimo 1053/1201
(87 %)
0 diff
(100 %id)
BX449935.
matches multiple genes
brain, fetal brain .i 3020 to 4057 1037 to 3     also hits gene sasimo 1035/1073
(96 %)
0 diff
(100 %id)
AW967645   .i 3143 to 3639 35 to 531       497/531
(93 %)
6 diff
(98.9 %id)
BG029356.
matches multiple genes
Bone, osteosarcoma, cell line .i 3281 to 4012 1 to 731     also hits gene sasimo 731/969
(75 %)
25 diff
(97.5 %id)
BX435199.
matches multiple genes
brain, fetal brain .i 3312 to 4078 793 to 32     also hits gene sasimo 762/977
(77 %)
0 diff
(100 %id)
AU151527.
matches multiple genes
  .i 3381 to 3958 587 to 1     also hits gene sasimo 587/589
(99 %)
24 diff
(96.0 %id)
AI654138.
matches multiple genes
Kidney .i 3422 to 3961 540 to 1     also hits gene sasimo 540/540
(100 %)
3 diff
(99.5 %id)
AI954700.
matches multiple genes
pooled germ cell tumors .i 3536 to 4098 569 to 7   tiling clone, also hits gene sasimo 563/569
(98 %)
0 diff
(100 %id)
BF894124 marrow .i 3549 to 3876 1 to 328       328/328
(100 %)
13 diff
(96.1 %id)
AA251426.
matches multiple genes
germinal center B cell .i 3593 to 4013 429 to 9     also hits gene sasimo 421/429
(98 %)
0 diff
(100 %id)
CA449892.
matches multiple genes
Chondrosarcoma, Left Pelvis .i 3602 to 4073 490 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 472/472
(100 %)
3 diff
(99.4 %id)
AW169458.
matches multiple genes
moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .i 3604 to 4073 484 to 15   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 470/470
(100 %)
2 diff
(99.6 %id)
N51307.
matches multiple genes
multiple sclerosis lesions .i 3611 to 4075 466 to 1     also hits gene sasimo 466/466
(100 %)
3 diff
(99.4 %id)
BM145274.
matches multiple genes
leukopheresis .i 3623 to 4073 469 to 18   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 452/453
(99 %)
7 diff
(98.5 %id)
N29517.
matches multiple genes
placenta .i 3628 to 4073 459 to 14   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 446/447
(99 %)
2 diff
(99.6 %id)
AW271569.
matches multiple genes
Kidney .i 3628 to 4075 448 to 1     also hits gene sasimo 448/448
(100 %)
6 diff
(98.7 %id)
AA134064.
matches multiple genes
uterus .i 3636 to 4073 459 to 22   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 438/441
(99 %)
1 diff
(99.8 %id)
BQ441725 embryonal carcinoma, cell line, testis .i 3755 to 4082 26 to 353       328/402
(81 %)
5 diff
(98.8 %id)
BM194374.
matches multiple genes
leukopheresis .i 3807 to 4073 283 to 17   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 267/269
(99 %)
0 diff
(100 %id)
AA594427.
matches multiple genes
colon, colon tumor RER+ .i 3828 to 4079 276 to 25   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 252/252
(100 %)
0 diff
(100 %id)
NM_001191007.1.
matches multiple genes
  .j 1 to 1971 1 to 1971 exact RefSeq, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 1971/1971
(100 %)
0 diff
(100 %id)
DB029192.
matches multiple genes
testis .j 83 to 686 2 to 605   tiling clone, capped also hits gene sasimo 604/604
(100 %)
4 diff
(99.4 %id)
DC350046.
matches multiple genes
brain .j 91 to 655 1 to 565   tiling clone, also hits gene sasimo 565/565
(100 %)
0 diff
(100 %id)
DC319853.
matches multiple genes
brain .j 92 to 651 1 to 560     also hits gene sasimo 560/560
(100 %)
0 diff
(100 %id)
BM837276.
matches multiple genes
Ascites, stomach .j 105 to 742 11 to 648     also hits gene sasimo 638/638
(100 %)
0 diff
(100 %id)
DA359539.
matches multiple genes
subthalamic nucleus .j 109 to 678 2 to 572   capped also hits gene sasimo 571/571
(100 %)
1 diff
(99.9 %id)
DA327996.
matches multiple genes
hippocampus .j 112 to 663 2 to 553   capped also hits gene sasimo 552/552
(100 %)
0 diff
(100 %id)
BM147285.
matches multiple genes
leukopheresis .j 112 to 655 1 to 544     also hits gene sasimo 544/544
(100 %)
1 diff
(99.9 %id)
DA941304.
matches multiple genes
Spleen .j 114 to 718 2 to 606   capped also hits gene sasimo 605/605
(100 %)
2 diff
(99.7 %id)
DA748059.
matches multiple genes
  .j 124 to 834 2 to 579   capped also hits gene sasimo 578/578
(100 %)
0 diff
(100 %id)
DA127020.
matches multiple genes
cerebellum .j 136 to 728 2 to 594   capped also hits gene sasimo 593/593
(100 %)
2 diff
(99.7 %id)
DA634991.
matches multiple genes
Kidney .j 137 to 715 2 to 580   capped also hits gene sasimo 579/579
(100 %)
0 diff
(100 %id)
DA113777.
matches multiple genes
cerebellum .j 138 to 699 2 to 563   capped also hits gene sasimo 562/562
(100 %)
0 diff
(100 %id)
BX331534.
matches multiple genes
Neuroblastoma Cot 10-normalized .j 148 to 848 1 to 700 S155X R156E S157A H158I S159P ...   also hits gene sasimo 700/700
(100 %)
1 diff
(99.9 %id)
BF245433.
matches multiple genes
brain, glioblastoma .j 148 to 830 1 to 667 D19T D20T T21P R22G S23L ...   also hits gene sasimo 667/817
(81 %)
27 diff
(96.7 %id)
BM472420.
matches multiple genes
embryonal carcinoma, cell line, testis .j 149 to 768 1 to 625 S155N R156K H158L Q171P Y172E ...   also hits gene sasimo 625/1238
(50 %)
18 diff
(98.6 %id)
DA758718.
matches multiple genes
  .j 151 to 708 2 to 559   capped also hits gene sasimo 558/558
(100 %)
0 diff
(100 %id)
BX419705.
matches multiple genes
brain, fetal brain .j 154 to 1045 1 to 892 S155X R156E   also hits gene sasimo 892/892
(100 %)
4 diff
(99.6 %id)
BX449936.
matches multiple genes
brain, fetal brain .j 154 to 1164 1 to 1001 R51X D66B R115X S155T R156E ...   also hits gene sasimo 1001/1001
(100 %)
12 diff
(98.9 %id)
DB016971.
matches multiple genes
esophageal, tumor tissue .j 154 to 728 2 to 576   capped also hits gene sasimo 575/575
(100 %)
0 diff
(100 %id)
TI_57240654.
matches multiple genes
  .j 156 to 976 29 to 844 D89I R90E K91R T92H P93Q ...   also hits gene sasimo 816/844
(96 %)
20 diff
(97.7 %id)
BQ431385.
matches multiple genes
eye, retinoblastoma .j 157 to 987 1 to 833 exact   also hits gene sasimo 833/834
(99 %)
6 diff
(99.3 %id)
BI914058.
matches multiple genes
brain .j 162 to 976 1 to 810 D89I R90E K91R T92H P93Q ...   also hits gene sasimo 810/810
(100 %)
14 diff
(98.3 %id)
AY007101.
matches multiple genes
  .j 168 to 1966 1 to 1799 exact tiling clone, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 1799/1799
(100 %)
0 diff
(100 %id)
BE258785.
matches multiple genes
eye, retinoblastoma .j 172 to 770 1 to 601 R127T R128E S129I R130K S131K ...   also hits gene sasimo 601/601
(100 %)
6 diff
(99.1 %id)
DA915350.
matches multiple genes
  .j 178 to 671 2 to 495   capped also hits gene sasimo 494/494
(100 %)
0 diff
(100 %id)
CD238852.
matches multiple genes
Pituitary .j 180 to 907 1 to 728 exact   also hits gene sasimo 728/728
(100 %)
2 diff
(99.8 %id)
DB032376.
matches multiple genes
testis .j 181 to 761 2 to 582 exact capped also hits gene sasimo 581/581
(100 %)
0 diff
(100 %id)
TI_57220794.
matches multiple genes
  .j 195 to 986 60 to 863 F53L A54L Y55M V56S Q57I ...   also hits gene sasimo 801/936
(85 %)
25 diff
(97.4 %id)
CN349869.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .j 199 to 752 1 to 554     also hits gene sasimo 554/554
(100 %)
0 diff
(100 %id)
BI758202.
matches multiple genes
brain .j 199 to 986 1 to 796 F53L A54L Y55M V56S Q57I ...   also hits gene sasimo 797/869
(91 %)
20 diff
(97.7 %id)
CB145246.
matches multiple genes
Liver .j 506 to 1050 1 to 545     also hits gene sasimo 545/545
(100 %)
1 diff
(99.9 %id)
BI091676.
matches multiple genes
cervix .j 580 to 1372 1 to 791     also hits gene sasimo 791/793
(99 %)
6 diff
(99.3 %id)
BE142875 head_neck .j 581 to 685 105 to 1     Submitted on the opposite strand 105/107
(98 %)
1 diff
(99.1 %id)
NM_001191006.1   .k 1 to 2207 1 to 2207 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 2207/2207
(100 %)
0 diff
(100 %id)
DC297695.
matches multiple genes
  .k 89 to 652 1 to 565   tiling clone, also hits gene sasimo 565/565
(100 %)
1 diff
(99.9 %id)
DC298826.
matches multiple genes
adrenal gland .k 92 to 660 1 to 569     also hits gene sasimo 569/569
(100 %)
0 diff
(100 %id)
DC305097.
matches multiple genes
cerebellum .k 92 to 648 1 to 558     also hits gene sasimo 558/558
(100 %)
1 diff
(99.9 %id)
DC361232.
matches multiple genes
  .k 92 to 664 1 to 573     also hits gene sasimo 573/573
(100 %)
1 diff
(99.9 %id)
DA618918.
matches multiple genes
  .k 92 to 685 2 to 595   capped also hits gene sasimo 594/594
(100 %)
0 diff
(100 %id)
DC296578.
matches multiple genes
synovial membrane tissue from rheumatioidarthritis .k 92 to 662 1 to 571     also hits gene sasimo 571/571
(100 %)
1 diff
(99.9 %id)
CB112800.
matches multiple genes
Liver .k 94 to 704 1 to 610     also hits gene sasimo 610/614
(99 %)
9 diff
(98.6 %id)
DC366428.
matches multiple genes
  .k 94 to 669 1 to 576     also hits gene sasimo 576/576
(100 %)
1 diff
(99.9 %id)
DC298585.
matches multiple genes
adrenal gland .k 95 to 671 1 to 577     also hits gene sasimo 577/577
(100 %)
0 diff
(100 %id)
DC360884.
matches multiple genes
  .k 95 to 677 1 to 584     also hits gene sasimo 584/584
(100 %)
1 diff
(99.9 %id)
DC360909.
matches multiple genes
  .k 95 to 667 1 to 573     also hits gene sasimo 573/573
(100 %)
0 diff
(100 %id)
DC374274.
matches multiple genes
brain .k 95 to 660 1 to 566     also hits gene sasimo 566/566
(100 %)
0 diff
(100 %id)
DC346587.
matches multiple genes
tongue, tumor tissue .k 102 to 676 1 to 575     also hits gene sasimo 575/575
(100 %)
0 diff
(100 %id)
BE281000.
matches multiple genes
choriocarcinoma, placenta .k 104 to 668 26 to 591     also hits gene sasimo 562/591
(95 %)
7 diff
(98.9 %id)
DA114995.
matches multiple genes
cerebellum .k 109 to 667 2 to 560   capped also hits gene sasimo 559/559
(100 %)
0 diff
(100 %id)
DA613670.
matches multiple genes
  .k 109 to 690 2 to 584   capped also hits gene sasimo 583/583
(100 %)
2 diff
(99.7 %id)
DA672685.
matches multiple genes
  .k 110 to 695 2 to 587   capped also hits gene sasimo 586/586
(100 %)
2 diff
(99.7 %id)
DA002860.
matches multiple genes
  .k 111 to 668 2 to 559   capped also hits gene sasimo 558/558
(100 %)
0 diff
(100 %id)
DA009281.
matches multiple genes
adrenal gland .k 111 to 661 2 to 552   capped also hits gene sasimo 551/551
(100 %)
0 diff
(100 %id)
DA019902.
matches multiple genes
  .k 111 to 674 2 to 565   capped also hits gene sasimo 564/564
(100 %)
0 diff
(100 %id)
DA104980.
matches multiple genes
cerebellum .k 111 to 678 2 to 570   capped also hits gene sasimo 569/569
(100 %)
1 diff
(99.9 %id)
DA121805.
matches multiple genes
cerebellum .k 111 to 669 2 to 560   capped also hits gene sasimo 559/559
(100 %)
0 diff
(100 %id)
DA387160.
matches multiple genes
thalamus .k 111 to 686 2 to 577   capped also hits gene sasimo 576/576
(100 %)
0 diff
(100 %id)
DA400335.
matches multiple genes
thalamus .k 111 to 678 2 to 569   capped also hits gene sasimo 568/568
(100 %)
0 diff
(100 %id)
DA722308.
matches multiple genes
  .k 111 to 683 2 to 574   capped also hits gene sasimo 573/573
(100 %)
0 diff
(100 %id)
DB124726.
matches multiple genes
thymus .k 111 to 662 2 to 553   capped also hits gene sasimo 552/552
(100 %)
0 diff
(100 %id)
DA718025.
matches multiple genes
  .k 112 to 673 2 to 564   capped also hits gene sasimo 563/563
(100 %)
3 diff
(99.5 %id)
DA405617.
matches multiple genes
thalamus .k 114 to 672 2 to 560   capped also hits gene sasimo 559/559
(100 %)
0 diff
(100 %id)
DB281663.
matches multiple genes
uterus .k 122 to 681 2 to 561   capped also hits gene sasimo 560/560
(100 %)
1 diff
(99.9 %id)
TI_44350226.
matches multiple genes
  .k 123 to 708 93 to 680     also hits gene sasimo 584/748
(78 %)
24 diff
(96.8 %id)
DA921278.
matches multiple genes
small intestine .k 124 to 669 2 to 547   capped also hits gene sasimo 546/546
(100 %)
0 diff
(100 %id)
DA458295.
matches multiple genes
tongue, tumor tissue .k 128 to 686 2 to 563   capped also hits gene sasimo 562/562
(100 %)
3 diff
(99.5 %id)
DA902194.
matches multiple genes
  .k 128 to 699 2 to 574   capped also hits gene sasimo 573/573
(100 %)
1 diff
(99.9 %id)
CB112315.
matches multiple genes
Liver .k 135 to 661 1 to 527     also hits gene sasimo 527/527
(100 %)
0 diff
(100 %id)
DA717418.
matches multiple genes
  .k 136 to 683 2 to 549   capped also hits gene sasimo 548/548
(100 %)
0 diff
(100 %id)
DA945160.
matches multiple genes
Spleen .k 136 to 689 2 to 556   capped also hits gene sasimo 555/555
(100 %)
1 diff
(99.9 %id)
DA948069.
matches multiple genes
Spleen .k 136 to 697 2 to 564   capped also hits gene sasimo 563/563
(100 %)
1 diff
(99.9 %id)
DB092796.
matches multiple genes
testis .k 136 to 694 2 to 561   capped also hits gene sasimo 560/560
(100 %)
1 diff
(99.9 %id)
DB219168.
matches multiple genes
trachea .k 136 to 686 2 to 552   capped also hits gene sasimo 551/551
(100 %)
0 diff
(100 %id)
DB288714.
matches multiple genes
uterus .k 137 to 685 2 to 552   capped also hits gene sasimo 551/551
(100 %)
2 diff
(99.7 %id)
DA303722.
matches multiple genes
hippocampus .k 138 to 686 2 to 550   capped also hits gene sasimo 549/549
(100 %)
0 diff
(100 %id)
DA799800.
matches multiple genes
brain .k 138 to 689 2 to 554   capped also hits gene sasimo 553/553
(100 %)
1 diff
(99.9 %id)
DB139157.
matches multiple genes
thymus .k 138 to 678 2 to 543   capped also hits gene sasimo 542/542
(100 %)
2 diff
(99.7 %id)
DA456252.
matches multiple genes
tongue, tumor tissue .k 177 to 731 2 to 556 exact tiling clone, capped also hits gene sasimo 555/555
(100 %)
0 diff
(100 %id)
TI_1948083600.
matches multiple genes
  .k 208 to 729 118 to 639     also hits gene sasimo 522/756
(69 %)
7 diff
(99.1 %id)
TI_1948083671.
matches multiple genes
  .k 208 to 729 129 to 650     also hits gene sasimo 522/620
(84 %)
7 diff
(98.9 %id)
TI_1948083761.
matches multiple genes
  .k 208 to 729 131 to 652     also hits gene sasimo 522/701
(74 %)
7 diff
(99.1 %id)
CV028383.
matches multiple genes
mixed .k 209 to 729 1 to 521     also hits gene sasimo 521/667
(78 %)
1 diff
(99.9 %id)
AI978838.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .k 693 to 1270 1 to 578   tiling clone, Submitted on the opposite strand, also hits gene sasimo 578/578
(100 %)
2 diff
(99.7 %id)
CU445607.
matches multiple genes
epidermis .k 696 to 1466 777 to 7   tiling clone, Submitted on the opposite strand, also hits gene sasimo 771/784
(98 %)
0 diff
(100 %id)
BF029371.
matches multiple genes
bladder, carcinoma, cell line .k 780 to 1351 1 to 573     also hits gene sasimo 573/848
(67 %)
33 diff
(96.2 %id)
BF029520.
matches multiple genes
bladder, carcinoma, cell line .k 780 to 1412 1 to 630     also hits gene sasimo 630/886
(71 %)
15 diff
(98.4 %id)
BQ428125.
matches multiple genes
leiomyosarcoma, uterus .l 1 to 746 8 to 759 exact tiling clone, AAA also hits gene sasimo 749/922
(81 %)
30 diff
(96.8 %id)
NM_001191009.1.
matches multiple genes
  .m 1 to 1920 1 to 1920 exact RefSeq, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 1920/1920
(100 %)
0 diff
(100 %id)
DC327669.
matches multiple genes
caudate nucleus .m 18 to 594 1 to 577   tiling clone, also hits gene sasimo 577/577
(100 %)
1 diff
(99.9 %id)
DC339874.
matches multiple genes
thalamus .m 31 to 578 1 to 548     also hits gene sasimo 548/548
(100 %)
0 diff
(100 %id)
DC396356.
matches multiple genes
testis .m 40 to 614 1 to 575     also hits gene sasimo 575/575
(100 %)
0 diff
(100 %id)
BG940132.
matches multiple genes
blood .m 50 to 469 1 to 420     also hits gene sasimo 420/420
(100 %)
0 diff
(100 %id)
DC305127.
matches multiple genes
cerebellum .m 81 to 645 1 to 566     also hits gene sasimo 566/566
(100 %)
2 diff
(99.7 %id)
DC371915.
matches multiple genes
  .m 81 to 639 1 to 559     also hits gene sasimo 559/559
(100 %)
0 diff
(100 %id)
DC365931.
matches multiple genes
  .m 82 to 622 1 to 541     also hits gene sasimo 541/541
(100 %)
0 diff
(100 %id)
DB463799.
matches multiple genes
hippocampus .m 83 to 495 1 to 413     also hits gene sasimo 413/413
(100 %)
3 diff
(99.3 %id)
CD701358.
matches multiple genes
normal nasopharynx .m 90 to 535 34 to 480     also hits gene sasimo 443/480
(92 %)
11 diff
(97.8 %id)
BM149388.
matches multiple genes
leukopheresis .m 90 to 548 1 to 458     also hits gene sasimo 458/458
(100 %)
6 diff
(98.7 %id)
BM146338.
matches multiple genes
leukopheresis .m 90 to 545 1 to 456     also hits gene sasimo 456/456
(100 %)
4 diff
(99.2 %id)
DC298750.
matches multiple genes
adrenal gland .m 91 to 633 1 to 543     also hits gene sasimo 543/543
(100 %)
0 diff
(100 %id)
DC348571.
matches multiple genes
  .m 94 to 645 1 to 552     also hits gene sasimo 552/557
(99 %)
2 diff
(99.7 %id)
DB479727.
matches multiple genes
hippocampus .m 94 to 577 1 to 484     also hits gene sasimo 484/484
(100 %)
2 diff
(99.6 %id)
AU099942.
matches multiple genes
  .m 94 to 393 1 to 300     also hits gene sasimo 300/300
(100 %)
4 diff
(98.7 %id)
DC385775.
matches multiple genes
skeletal muscle .m 94 to 637 1 to 544     also hits gene sasimo 544/544
(100 %)
0 diff
(100 %id)
DC342172.
matches multiple genes
thalamus .m 95 to 644 1 to 550     also hits gene sasimo 550/551
(99 %)
1 diff
(99.9 %id)
DC366980.
matches multiple genes
  .m 95 to 566 1 to 472     also hits gene sasimo 472/472
(100 %)
0 diff
(100 %id)
DC396285.
matches multiple genes
testis .m 95 to 632 1 to 538     also hits gene sasimo 538/538
(100 %)
0 diff
(100 %id)
DC416552.
matches multiple genes
trachea .m 95 to 623 1 to 531     also hits gene sasimo 531/531
(100 %)
3 diff
(99.5 %id)
DC365816.
matches multiple genes
  .m 96 to 643 1 to 548     also hits gene sasimo 548/548
(100 %)
0 diff
(100 %id)
DB477379.
matches multiple genes
hippocampus .m 101 to 590 1 to 490     also hits gene sasimo 490/490
(100 %)
0 diff
(100 %id)
BU193345.
matches multiple genes
eye, retinoblastoma .m 104 to 958 1 to 869 exact tiling clone, also hits gene sasimo 869/901
(96 %)
17 diff
(98.2 %id)
AK296175.
matches multiple genes
thalamus .m 108 to 1196 1 to 1089 exact tiling clone, also hits gene sasimo 1089/1089
(100 %)
1 diff
(100.0 %id)
DC340557.
matches multiple genes
thalamus .m 108 to 740 1 to 633 exact   also hits gene sasimo 633/633
(100 %)
1 diff
(99.9 %id)
CD698202.
matches multiple genes
normal nasopharynx .m 108 to 639 11 to 541     also hits gene sasimo 527/541
(97 %)
10 diff
(98.2 %id)
DB493330.
matches multiple genes
hypothalamus .m 109 to 601 1 to 493     also hits gene sasimo 493/494
(99 %)
1 diff
(99.8 %id)
DB271309.
matches multiple genes
uterus .m 111 to 647 2 to 538   capped also hits gene sasimo 537/537
(100 %)
1 diff
(99.9 %id)
BE018162.
matches multiple genes
cervical carcinoma cell line, cervix .m 117 to 652 1 to 536     also hits gene sasimo 536/536
(100 %)
0 diff
(100 %id)
DC378507.
matches multiple genes
  .m 119 to 706 1 to 588 exact   also hits gene sasimo 588/588
(100 %)
0 diff
(100 %id)
BF694029.
matches multiple genes
muscle (skeletal) .m 122 to 516 1 to 408     also hits gene sasimo 405/411
(98 %)
20 diff
(95.2 %id)
CB127583.
matches multiple genes
cervix, Uterine .m 123 to 550 1 to 428     also hits gene sasimo 428/429
(99 %)
1 diff
(99.8 %id)
AL045148.
matches multiple genes
testis .m 124 to 616 1 to 493     also hits gene sasimo 493/493
(100 %)
0 diff
(100 %id)
BM850053.
matches multiple genes
myeloma .m 129 to 563 1 to 435     also hits gene sasimo 435/435
(100 %)
0 diff
(100 %id)
BF697840.
matches multiple genes
brain, primitive neuroectoderm .m 132 to 645 1 to 514     also hits gene sasimo 514/518
(99 %)
7 diff
(98.7 %id)
DB145172.
matches multiple genes
thymus .m 132 to 609 2 to 479   capped also hits gene sasimo 478/478
(100 %)
0 diff
(100 %id)
BG940934.
matches multiple genes
blood .m 136 to 581 1 to 446     also hits gene sasimo 446/446
(100 %)
1 diff
(99.8 %id)
DB472841.
matches multiple genes
hippocampus .m 136 to 591 1 to 456     also hits gene sasimo 456/456
(100 %)
2 diff
(99.6 %id)
DA915550.
matches multiple genes
  .m 136 to 536 2 to 402   capped also hits gene sasimo 401/401
(100 %)
0 diff
(100 %id)
CD685923.
matches multiple genes
normal nasopharynx .m 137 to 591 23 to 476     also hits gene sasimo 450/476
(94 %)
7 diff
(98.6 %id)
CD688593.
matches multiple genes
normal nasopharynx .m 137 to 409 34 to 308     also hits gene sasimo 275/308
(89 %)
7 diff
(97.8 %id)
CD689296.
matches multiple genes
normal nasopharynx .m 137 to 645 23 to 530     also hits gene sasimo 504/532
(94 %)
11 diff
(98.0 %id)
DB455068.
matches multiple genes
testis .m 137 to 633 1 to 497     also hits gene sasimo 497/497
(100 %)
0 diff
(100 %id)
DB462412.
matches multiple genes
testis .m 137 to 612 1 to 476     also hits gene sasimo 476/476
(100 %)
0 diff
(100 %id)
DA799509.
matches multiple genes
brain .m 137 to 658 2 to 523   capped also hits gene sasimo 522/522
(100 %)
0 diff
(100 %id)
DA797313.
matches multiple genes
brain .m 138 to 623 2 to 490   capped also hits gene sasimo 489/489
(100 %)
4 diff
(99.2 %id)
DB478564.
matches multiple genes
hippocampus .m 140 to 601 1 to 462     also hits gene sasimo 462/462
(100 %)
0 diff
(100 %id)
BG613901.
matches multiple genes
embryonal carcinoma, testis .m 179 to 1002 1 to 819 D89I R90E K91R T92H P93Q ...   also hits gene sasimo 819/820
(99 %)
30 diff
(96.4 %id)
DC354356.
matches multiple genes
heart .m 180 to 788 1 to 609 exact   also hits gene sasimo 609/609
(100 %)
1 diff
(99.9 %id)
DC372865.
matches multiple genes
  .m 180 to 721 1 to 543 R27L R28A E29*   also hits gene sasimo 543/543
(100 %)
2 diff
(99.7 %id)
TI_154151972.
matches multiple genes
  .m 380 to 841 94 to 562     also hits gene sasimo 476/473
(100 %)
8 diff
(98.4 %id)
BE301644.
matches multiple genes
cervical carcinoma cell line, cervix .m 1413 to 1924 513 to 2   tiling clone, also hits gene sasimo 512/513
(99 %)
0 diff
(100 %id)
BI559513.
matches multiple genes
testis .n 1 to 816 1 to 821 exact tiling clone, also hits gene sasimo 817/823
(99 %)
19 diff
(97.7 %id)
TI_44348166.
matches multiple genes
  .n 2 to 816 89 to 904 exact tiling clone, also hits gene sasimo 812/906
(89 %)
21 diff
(97.7 %id)
BM312155.
matches multiple genes
Pancreas, Purified pancreatic islet .n 269 to 768 10 to 509   tiling clone, also hits gene sasimo 501/509
(98 %)
6 diff
(98.9 %id)
BF984187.
matches multiple genes
duodenal adenocarcinoma, cell line, small intestine .n 637 to 1225 49 to 632   tiling clone, also hits gene sasimo 584/665
(87 %)
20 diff
(97.0 %id)
DB245698.
matches multiple genes
uterus, tumor tissue .o 1 to 561 2 to 562 exact tiling clone, capped also hits gene sasimo 561/561
(100 %)
0 diff
(100 %id)
DA978063.
matches multiple genes
synovial membrane tissue from rheumatioidarthritis .o 24 to 565 2 to 543 I83L tiling clone, capped also hits gene sasimo 542/542
(100 %)
1 diff
(99.9 %id)
BI553459.
matches multiple genes
brain, hippocampus .p 1 to 695 5 to 709 exact tiling clone, also hits gene sasimo 709/813
(87 %)
18 diff
(97.8 %id)
TI_44170138.
matches multiple genes
  .p 2 to 695 126 to 829   tiling clone, also hits gene sasimo 704/933
(75 %)
20 diff
(97.9 %id)
DB473954.
matches multiple genes
hippocampus .p 5 to 453 1 to 449     also hits gene sasimo, vymorbo 449/449
(100 %)
7 diff
(98.5 %id)
AW418771.
matches multiple genes
pooled .q 1 to 388 388 to 1   tiling clone, also hits gene sasimo 388/388
(100 %)
2 diff
(99.5 %id)
BX499280.
matches multiple genes
Liver .q 32 to 592 1 to 573     also hits gene sasimo 585/573
(102 %)
57 diff
(90.1 %id)
DB258522.
matches multiple genes
uterus .r 1 to 578 2 to 579 exact tiling clone, capped also hits gene sasimo 578/578
(100 %)
0 diff
(100 %id)
DB111167.
matches multiple genes
thymus .s 1 to 582 2 to 583   tiling clone, capped also hits gene sasimo 582/582
(100 %)
3 diff
(99.5 %id)
DA732564.
matches multiple genes
  .s 300 to 1065 2 to 772   tiling clone, capped also hits gene sasimo 771/771
(100 %)
19 diff
(97.6 %id)
DB343341.
matches multiple genes
thymus .s 1751 to 2295 545 to 1   tiling clone, also hits gene sasimo 545/545
(100 %)
0 diff
(100 %id)
DB364108.
matches multiple genes
  .s 1801 to 2301 509 to 6   tiling clone, also hits gene sasimo 504/595
(84 %)
0 diff
(100 %id)
AW601902.
matches multiple genes
breast .t 1 to 367 1 to 365 S8P L9I F10Y I11* tiling clone, also hits gene sasimo 365/365
(100 %)
2 diff
(99.5 %id)
BG387519.
matches multiple genes
embryonal carcinoma, cell line, testis .u 1 to 657 28 to 686 L2A R13V S14A R15E S16A ... tiling clone, also hits gene sasimo 659/688
(95 %)
23 diff
(96.7 %id)
DA938636.
matches multiple genes
Spleen .va 1 to 572 2 to 573 exact tiling clone, capped also hits gene sasimo 572/572
(100 %)
0 diff
(100 %id)
BQ052085.
matches multiple genes
blood, natural killer cells, cell line .vb -8 to 915 25 to 954   tiling clone, also hits gene sasimo 930/1100
(84 %)
23 diff
(98.0 %id)
R57986.
matches multiple genes
  .vb 688 to 995 1 to 305   tiling clone, also hits gene sasimo 305/305
(100 %)
14 diff
(95.5 %id)
BX408338.
matches multiple genes
fetal liver, Liver .vc 1 to 297 1 to 297 exact tiling clone, also hits gene sasimo 297/297
(100 %)
0 diff
(100 %id)
BX450393.
matches multiple genes
fetal liver, Liver .vc 1 to 297 1 to 297 R91T   also hits gene sasimo 297/297
(100 %)
1 diff
(99.7 %id)
AA091154   .vc 34 to 294 1 to 257       257/261
(98 %)
9 diff
(96.6 %id)
DA007394.
matches multiple genes
  .vd 1 to 558 2 to 559 exact tiling clone, capped also hits gene sasimo 558/558
(100 %)
1 diff
(99.9 %id)
BY796465.
matches multiple genes
eye .ve 1 to 360 1 to 360 exact tiling clone, also hits gene sasimo 360/360
(100 %)
0 diff
(100 %id)
CD657294.
matches multiple genes
Embryonic Stem cells .vf 1 to 762 12 to 766   tiling clone, also hits gene sasimo 755/791
(95 %)
22 diff
(97.3 %id)
BI549361.
matches multiple genes
brain, hippocampus .vf 4 to 685 1 to 686   tiling clone, also hits gene sasimo 682/686
(99 %)
4 diff
(99.5 %id)
TI_44167492.
matches multiple genes
  .vf 5 to 685 82 to 762     also hits gene sasimo 677/762
(88 %)
7 diff
(99.1 %id)
CN283796.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .vf 699 to 1188 1 to 490   tiling clone, also hits gene sasimo 490/490
(100 %)
3 diff
(99.4 %id)
AW894020.
matches multiple genes
nervous_normal .vf 763 to 1210 1 to 457     also hits gene sasimo 457/529
(86 %)
33 diff
(93.8 %id)
DA736261.
matches multiple genes
  .vf 798 to 1575 15 to 789   capped also hits gene sasimo 775/790
(98 %)
9 diff
(98.9 %id)
DB085180.
matches multiple genes
testis .vf 863 to 1423 2 to 562   capped also hits gene sasimo 561/561
(100 %)
0 diff
(100 %id)
DB093150.
matches multiple genes
testis .vf 865 to 1412 2 to 549   capped also hits gene sasimo 548/548
(100 %)
1 diff
(99.9 %id)
AK125834.
matches multiple genes
testis .vf 928 to 4884 1 to 3957 exact tiling clone, available from FLJ, also hits gene sasimo 3957/3957
(100 %)
5 diff
(99.9 %id)
DB065358.
matches multiple genes
testis .vf 929 to 1471 2 to 544   capped also hits gene sasimo 543/543
(100 %)
0 diff
(100 %id)
BQ322054.
matches multiple genes
colon .vf 947 to 1275 28 to 366     also hits gene sasimo 339/370
(91 %)
24 diff
(93.6 %id)
AL706814.
matches multiple genes
human skeletal muscle .vf 1070 to 1822 1 to 753     also hits gene sasimo 753/753
(100 %)
0 diff
(100 %id)
AL706815.
matches multiple genes
human skeletal muscle .vf 1070 to 1821 1 to 752     also hits gene sasimo 752/752
(100 %)
0 diff
(100 %id)
CV382494.
matches multiple genes
colon_est .vf 1090 to 1401 14 to 325     also hits gene sasimo 312/325
(96 %)
6 diff
(98.2 %id)
BM465061.
matches multiple genes
lymph, lymphoma, cell line .vf 1187 to 1971 8 to 802     also hits gene sasimo 795/1157
(68 %)
26 diff
(97.8 %id)
AW894015 nervous_normal .vf 1489 to 1598 22 to 130       109/130
(83 %)
6 diff
(95.4 %id)
CD652998.
matches multiple genes
Embryonic Stem cells .vf 1554 to 2303 11 to 753     also hits gene sasimo 743/766
(96 %)
11 diff
(98.6 %id)
CB116698.
matches multiple genes
Liver .vf 2222 to 2388 1 to 167     also hits gene sasimo 167/167
(100 %)
3 diff
(98.3 %id)
DA505190 brain .vf 2319 to 2795 2 to 478   capped   477/477
(100 %)
0 diff
(100 %id)
DA513186.
matches multiple genes
brain .vf 2322 to 2887 2 to 566   capped also hits gene sasimo 565/565
(100 %)
2 diff
(99.7 %id)
AA812013.
matches multiple genes
germinal center B cell .vf 2493 to 2985 497 to 5     also hits gene sasimo 493/497
(99 %)
0 diff
(100 %id)
T10064.
matches multiple genes
  .vf 2515 to 2741 16 to 242     also hits gene sasimo 227/249
(91 %)
1 diff
(99.6 %id)
H11130.
matches multiple genes
whole brain .vf 2515 to 2977 1 to 467     also hits gene sasimo 467/478
(97 %)
10 diff
(98.0 %id)
AW593288.
matches multiple genes
pooled .vf 2536 to 2983 456 to 9     also hits gene sasimo 448/456
(98 %)
6 diff
(98.7 %id)
AW977626.
matches multiple genes
  .vf 2561 to 2979 419 to 1     Submitted on the opposite strand, also hits gene sasimo 419/419
(100 %)
6 diff
(98.6 %id)
AA737657.
matches multiple genes
germinal center B cell .vf 2578 to 2985 412 to 5     also hits gene sasimo 408/412
(99 %)
0 diff
(100 %id)
DA876388.
matches multiple genes
Prostate .vf 2756 to 3310 2 to 557   capped also hits gene sasimo 556/556
(100 %)
2 diff
(99.7 %id)
DA158454.
matches multiple genes
amygdala .vf 3176 to 3745 2 to 571   tiling clone, capped also hits gene sasimo 570/570
(100 %)
2 diff
(99.7 %id)
CN349867.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .vf 3225 to 3742 1 to 518     also hits gene sasimo 518/518
(100 %)
1 diff
(99.9 %id)
H11042.
matches multiple genes
whole brain .vf 3825 to 4287 482 to 15   tiling clone, AAA also hits gene sasimo 468/493
(94 %)
11 diff
(97.8 %id)
T10065.
matches multiple genes
  .vf 3974 to 4287 319 to 5     also hits gene sasimo 315/319
(98 %)
0 diff
(100 %id)
DB339646.
matches multiple genes
testis .vf 4329 to 4884 556 to 1     also hits gene sasimo 556/556
(100 %)
0 diff
(100 %id)
DB368701.
matches multiple genes
  .vf 4352 to 4884 535 to 1     also hits gene sasimo 535/545
(98 %)
18 diff
(96.7 %id)
DB316575.
matches multiple genes
brain .vf 4377 to 4884 508 to 1     also hits gene sasimo 508/508
(100 %)
2 diff
(99.7 %id)
AK093226.
matches multiple genes
testis .vg 1 to 2834 2 to 2834 exact tiling clone, available from FLJ, also hits gene sasimo 2834/2834
(100 %)
3 diff
(99.9 %id)
DW440918.
matches multiple genes
Liver .vg 461 to 828 15 to 382     also hits gene sasimo 364/382
(95 %)
6 diff
(98.5 %id)
NR_034035.1.
matches multiple genes
  .vg 464 to 2834 1 to 2371 exact RefSeq, tiling clone, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base), also hits gene sasimo 2371/2371
(100 %)
0 diff
(100 %id)
BG718398.
matches multiple genes
testis .vg 471 to 1182 1 to 711     also hits gene sasimo 707/711
(99 %)
9 diff
(98.8 %id)
DB211668.
matches multiple genes
trachea .vg 475 to 1019 2 to 546   capped also hits gene sasimo 545/545
(100 %)
0 diff
(100 %id)
DA775141.
matches multiple genes
brain .vg 504 to 1085 2 to 583   capped also hits gene sasimo 582/582
(100 %)
0 diff
(100 %id)
DB273745.
matches multiple genes
uterus .vg 504 to 1020 2 to 518   capped also hits gene sasimo 517/517
(100 %)
1 diff
(99.9 %id)
CK002673.
matches multiple genes
brain/CNS, Bulk tissue from Human Spinal cord .vg 552 to 1210 1 to 653     also hits gene sasimo 653/669
(97 %)
15 diff
(97.8 %id)
DW410007.
matches multiple genes
Liver .vg 553 to 877 13 to 336     also hits gene sasimo 324/336
(96 %)
6 diff
(98.3 %id)
DW421580.
matches multiple genes
Liver .vg 553 to 837 13 to 297     also hits gene sasimo 281/297
(94 %)
7 diff
(97.7 %id)
DW439968.
matches multiple genes
Liver .vg 553 to 780 13 to 240     also hits gene sasimo 224/240
(93 %)
6 diff
(97.5 %id)
DB261590.
matches multiple genes
uterus .vg 556 to 1127 2 to 574   capped also hits gene sasimo 573/573
(100 %)
3 diff
(99.5 %id)
DA244361.
matches multiple genes
brain .vg 558 to 1155 2 to 599   capped also hits gene sasimo 598/598
(100 %)
2 diff
(99.7 %id)
DB137730.
matches multiple genes
thymus .vg 558 to 1113 2 to 557   capped also hits gene sasimo 556/556
(100 %)
0 diff
(100 %id)
DB165264.
matches multiple genes
thymus .vg 559 to 1111 2 to 556   capped also hits gene sasimo 555/555
(100 %)
2 diff
(99.7 %id)
DA487462.
matches multiple genes
brain .vg 560 to 1128 2 to 570   capped also hits gene sasimo 569/569
(100 %)
0 diff
(100 %id)
DA687166.
matches multiple genes
  .vg 572 to 1111 2 to 541   capped also hits gene sasimo 540/540
(100 %)
0 diff
(100 %id)
DA744830.
matches multiple genes
  .vg 572 to 1146 2 to 576   capped also hits gene sasimo 575/575
(100 %)
0 diff
(100 %id)
BX407959.
matches multiple genes
fetal liver, Liver .vg 574 to 953 1 to 380     also hits gene sasimo 380/380
(100 %)
0 diff
(100 %id)
BX443849.
matches multiple genes
fetal liver, Liver .vg 574 to 842 1 to 269     also hits gene sasimo 269/269
(100 %)
0 diff
(100 %id)
DA502201.
matches multiple genes
brain .vg 574 to 1138 2 to 568   capped also hits gene sasimo 567/567
(100 %)
2 diff
(99.7 %id)
DA719868.
matches multiple genes
  .vg 574 to 1148 2 to 576   capped also hits gene sasimo 575/575
(100 %)
0 diff
(100 %id)
DB140196.
matches multiple genes
thymus .vg 574 to 1109 2 to 539   capped also hits gene sasimo 538/538
(100 %)
3 diff
(99.5 %id)
DB269967.
matches multiple genes
uterus .vg 574 to 1022 2 to 451   capped also hits gene sasimo 450/450
(100 %)
2 diff
(99.6 %id)
CN346225.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .vg 576 to 1225 1 to 650     also hits gene sasimo 650/650
(100 %)
1 diff
(99.9 %id)
BE294387.
matches multiple genes
muscle, rhabdomyosarcoma .vg 576 to 914 1 to 340     also hits gene sasimo 340/679
(50 %)
7 diff
(99.0 %id)
DA093135.
matches multiple genes
cerebellum .vg 577 to 1151 2 to 576   capped also hits gene sasimo 575/575
(100 %)
0 diff
(100 %id)
DB467228.
matches multiple genes
hippocampus .vg 577 to 1024 1 to 450     also hits gene sasimo 450/450
(100 %)
16 diff
(96.5 %id)
DA777200.
matches multiple genes
brain .vg 577 to 1137 11 to 572   capped also hits gene sasimo 562/562
(100 %)
3 diff
(99.5 %id)
DB253331.
matches multiple genes
uterus .vg 577 to 1149 2 to 574   capped also hits gene sasimo 573/573
(100 %)
1 diff
(99.9 %id)
DB271852.
matches multiple genes
uterus .vg 579 to 1118 2 to 541   capped also hits gene sasimo 540/540
(100 %)
0 diff
(100 %id)
DW440996.
matches multiple genes
Liver .vg 590 to 954 18 to 381     also hits gene sasimo 360/381
(94 %)
9 diff
(97.7 %id)
DW442971.
matches multiple genes
Liver .vg 590 to 804 18 to 232     also hits gene sasimo 211/232
(90 %)
9 diff
(96.2 %id)
AA336770.
matches multiple genes
endometrium .vg 596 to 810 1 to 216     also hits gene sasimo 216/216
(100 %)
2 diff
(99.1 %id)
DB232599.
matches multiple genes
trachea .vg 598 to 1145 2 to 549   capped also hits gene sasimo 548/548
(100 %)
1 diff
(99.9 %id)
DA803753.
matches multiple genes
brain .vg 599 to 1137 2 to 541   capped also hits gene sasimo 540/540
(100 %)
1 diff
(99.9 %id)
DA872198.
matches multiple genes
Prostate .vg 599 to 1132 2 to 536   capped also hits gene sasimo 535/535
(100 %)
1 diff
(99.9 %id)
CD699770.
matches multiple genes
normal nasopharynx .vg 600 to 825 46 to 271     also hits gene sasimo 222/271
(81 %)
7 diff
(97.5 %id)
CD709285.
matches multiple genes
normal nasopharynx .vg 600 to 841 17 to 258     also hits gene sasimo 238/258
(92 %)
7 diff
(97.3 %id)
DW418511.
matches multiple genes
Liver .vg 600 to 1006 18 to 424     also hits gene sasimo 403/424
(95 %)
9 diff
(97.9 %id)
DW467249.
matches multiple genes
Liver .vg 600 to 929 18 to 347     also hits gene sasimo 330/347
(95 %)
6 diff
(98.3 %id)
DA917053.
matches multiple genes
small intestine .vg 600 to 1158 2 to 560   capped also hits gene sasimo 559/559
(100 %)
0 diff
(100 %id)
DA004119.
matches multiple genes
  .vg 601 to 1169 2 to 570   capped also hits gene sasimo 569/569
(100 %)
0 diff
(100 %id)
DA171126.
matches multiple genes
amygdala .vg 601 to 1132 2 to 534   capped also hits gene sasimo 533/533
(100 %)
1 diff
(99.9 %id)
DA277286.
matches multiple genes
corpus callosum .vg 601 to 1141 2 to 544   capped also hits gene sasimo 543/543
(100 %)
2 diff
(99.7 %id)
AV761530.
matches multiple genes
bone marrow .vg 601 to 1060 1 to 458     also hits gene sasimo 458/462
(99 %)
8 diff
(98.3 %id)
DA757577.
matches multiple genes
  .vg 601 to 1164 2 to 565   capped also hits gene sasimo 564/564
(100 %)
0 diff
(100 %id)
DA802036.
matches multiple genes
brain .vg 601 to 1062 2 to 464   capped also hits gene sasimo 463/463
(100 %)
2 diff
(99.6 %id)
DA944007.
matches multiple genes
Spleen .vg 601 to 1181 2 to 582   capped also hits gene sasimo 581/581
(100 %)
0 diff
(100 %id)
DB004635.
matches multiple genes
breast, tumor tissue .vg 601 to 1165 2 to 566   capped also hits gene sasimo 565/565
(100 %)
0 diff
(100 %id)
DB120432.
matches multiple genes
thymus .vg 601 to 1139 2 to 540   capped also hits gene sasimo 539/539
(100 %)
0 diff
(100 %id)
DB141477.
matches multiple genes
thymus .vg 601 to 1098 2 to 501   capped also hits gene sasimo 500/500
(100 %)
2 diff
(99.6 %id)
DB267923.
matches multiple genes
uterus .vg 601 to 1173 2 to 574   capped also hits gene sasimo 573/573
(100 %)
0 diff
(100 %id)
DB154974.
matches multiple genes
thymus .vg 614 to 1200 2 to 588   capped also hits gene sasimo 587/587
(100 %)
0 diff
(100 %id)
DW411999.
matches multiple genes
Liver .vg 620 to 928 18 to 326     also hits gene sasimo 305/326
(93 %)
9 diff
(97.3 %id)
DW420502.
matches multiple genes
Liver .vg 620 to 901 18 to 299     also hits gene sasimo 278/300
(92 %)
9 diff
(97.0 %id)
DB106130.
matches multiple genes
thymus .vg 627 to 1201 2 to 577   capped also hits gene sasimo 576/576
(100 %)
2 diff
(99.7 %id)
DB448358.
matches multiple genes
testis .vg 628 to 1049 1 to 422     also hits gene sasimo 422/422
(100 %)
11 diff
(97.4 %id)
AW243460.
matches multiple genes
Kidney .vg 635 to 1063 1 to 433     Submitted on the opposite strand, also hits gene sasimo 433/439
(98 %)
17 diff
(96.2 %id)
DB023640.
matches multiple genes
testis .vg 639 to 1185 2 to 548   capped also hits gene sasimo 547/547
(100 %)
1 diff
(99.9 %id)
DA042048.
matches multiple genes
bladder .vg 644 to 1220 2 to 579   capped also hits gene sasimo 578/578
(100 %)
2 diff
(99.7 %id)
DA239106.
matches multiple genes
brain .vg 644 to 1222 2 to 580   capped also hits gene sasimo 579/579
(100 %)
1 diff
(99.9 %id)
DA278924.
matches multiple genes
corpus callosum .vg 644 to 1212 2 to 570   capped also hits gene sasimo 569/569
(100 %)
0 diff
(100 %id)
DA295331.
matches multiple genes
hippocampus .vg 644 to 1227 2 to 586   capped also hits gene sasimo 585/585
(100 %)
1 diff
(99.9 %id)
DA302765.
matches multiple genes
hippocampus .vg 644 to 1237 2 to 595   capped also hits gene sasimo 594/594
(100 %)
0 diff
(100 %id)
DA505898.
matches multiple genes
brain .vg 644 to 1209 2 to 570   capped also hits gene sasimo 569/569
(100 %)
3 diff
(99.5 %id)
DA590595.
matches multiple genes
lung .vg 644 to 1124 2 to 483   capped also hits gene sasimo 482/482
(100 %)
1 diff
(99.8 %id)
DA932995.
matches multiple genes
Spleen .vg 644 to 1205 2 to 563   capped also hits gene sasimo 562/562
(100 %)
0 diff
(100 %id)
DB011793.
matches multiple genes
esophageal, tumor tissue .vg 644 to 1202 2 to 560   capped also hits gene sasimo 559/559
(100 %)
0 diff
(100 %id)
DB110312.
matches multiple genes
thymus .vg 644 to 1219 2 to 578   capped also hits gene sasimo 577/577
(100 %)
1 diff
(99.9 %id)
BE465222.
matches multiple genes
Kidney .vg 648 to 1040 393 to 1     also hits gene sasimo 393/393
(100 %)
0 diff
(100 %id)
BF594682.
matches multiple genes
Kidney .vg 672 to 1040 381 to 13   AAA also hits gene sasimo 369/369
(100 %)
1 diff
(99.8 %id)
AI365299.
matches multiple genes
pooled germ cell tumors .vg 711 to 1040 330 to 1     also hits gene sasimo 330/330
(100 %)
0 diff
(100 %id)
DA572604.
matches multiple genes
whole embryo, mainly body .vh 1 to 800 2 to 798 exact tiling clone, capped also hits gene sasimo 797/797
(100 %)
13 diff
(98.4 %id)
DB359666.
matches multiple genes
whole embryo, mainly body .vh 1138 to 1671 537 to 1   tiling clone, also hits gene sasimo 537/560
(95 %)
11 diff
(98.1 %id)
BI459419.
matches multiple genes
testis .vi 1 to 781 1 to 778     also hits gene sasimo 778/785
(99 %)
27 diff
(96.6 %id)
CF993682.
matches multiple genes
Human Placenta, placenta .vi 6 to 741 29 to 768   tiling clone, also hits gene sasimo 740/841
(87 %)
12 diff
(98.6 %id)
CN345836.
matches multiple genes
embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .vi 21 to 714 1 to 695     also hits gene sasimo 695/695
(100 %)
1 diff
(99.9 %id)
BG613865.
matches multiple genes
embryonal carcinoma, testis .vi 61 to 777 1 to 726     also hits gene sasimo 726/764
(95 %)
21 diff
(97.3 %id)
BG472234.
matches multiple genes
eye, retinoblastoma .vi 644 to 1405 1 to 761 exact tiling clone, also hits gene sasimo 761/766
(99 %)
8 diff
(99.0 %id)
BG472169.
matches multiple genes
eye, retinoblastoma .vi 644 to 1489 1 to 843 K70Q K129T E130G S131I R132K ... tiling clone, also hits gene sasimo 843/868
(97 %)
29 diff
(96.7 %id)
AA279274.
matches multiple genes
germinal center B cell .vj-u 1 to 142 1 to 143   tiling clone, also hits gene sasimo 143/143
(100 %)
1 diff
(99.4 %id)
TI_159693829   .vj-u 624 to 1320 762 to 76   tiling clone, AAA   687/913
(75 %)
13 diff
(98.6 %id)
AA279275.
matches multiple genes
germinal center B cell .vj-u 991 to 1320 330 to 1     also hits gene sasimo 330/330
(100 %)
0 diff
(100 %id)
CB047326.
matches multiple genes
Kidney .vk 1 to 413 10 to 422   tiling clone, fully sequenced, also hits gene sasimo 413/422
(97 %)
7 diff
(98.4 %id)
CB047325.
matches multiple genes
Kidney .vk 64 to 437 373 to 1   tiling clone, fully sequenced, also hits gene sasimo 373/373
(100 %)
1 diff
(99.8 %id)
BF305913.
matches multiple genes
muscle, rhabdomyosarcoma .vk 421 to 1213 1 to 791 H6Q A7L M8* tiling clone, also hits gene sasimo 791/929
(85 %)
27 diff
(97.1 %id)
DW427355.
matches multiple genes
Liver .vk 470 to 727 17 to 279     also hits gene sasimo 263/279
(94 %)
9 diff
(96.8 %id)
DW444415.
matches multiple genes
Liver .vk 470 to 679 17 to 226   tiling clone, also hits gene sasimo 210/226
(92 %)
6 diff
(97.4 %id)
BX453434.
matches multiple genes
fetal liver, Liver .vk 654 to 916 1 to 264   tiling clone, also hits gene sasimo 264/264
(100 %)
1 diff
(99.7 %id)
DW422093.
matches multiple genes
Liver .vl 1 to 281 19 to 295   tiling clone, also hits gene sasimo 278/295
(94 %)
6 diff
(98.0 %id)
CN346213.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .vl 5 to 691 1 to 687     also hits gene sasimo 687/687
(100 %)
3 diff
(99.6 %id)
DA752628.
matches multiple genes
  .vl 73 to 642 2 to 571   tiling clone, capped also hits gene sasimo 570/570
(100 %)
0 diff
(100 %id)
BU429545.
matches multiple genes
lymph .vl 349 to 881 1 to 533     also hits gene sasimo 533/533
(100 %)
5 diff
(99.1 %id)
TI_154149062.
matches multiple genes
  .vl 356 to 1007 86 to 741   tiling clone, also hits gene sasimo 656/724
(90 %)
34 diff
(95.4 %id)
TI_154150681.
matches multiple genes
  .vl 356 to 1163 80 to 887   tiling clone, also hits gene sasimo 808/809
(99 %)
14 diff
(98.3 %id)
DA188422.
matches multiple genes
amygdala .vm-u 1 to 536 2 to 538 exact tiling clone, capped also hits gene sasimo 537/537
(100 %)
3 diff
(99.5 %id)
BF084320.
matches multiple genes
colon .vm-u 46 to 461 429 to 14 exact tiling clone, also hits gene sasimo 416/429
(96 %)
0 diff
(100 %id)
BF084310.
matches multiple genes
colon .vm-u 90 to 363 283 to 9     also hits gene sasimo 275/283
(97 %)
0 diff
(100 %id)
AK054635   Gene SRSF10, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
95 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh, .vi, .vj-u, .vk, .vl, .vm-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI