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Gene FUNDC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
74 supporting clones for gene FUNDC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM837991 Ascites, stomach .a 1 to 608 1 to 608   tiling clone,   608/608
(100 %)
0 diff
(100 %id)
FN150860 breast carcinoma .a 5 to 88 1 to 83       83/83
(100 %)
3 diff
(96.4 %id)
BI548142 brain, hippocampus .a 26 to 887 1 to 864 exact     864/865
(99 %)
13 diff
(98.5 %id)
BI552210 brain, hippocampus .a 26 to 834 1 to 808 K104T D105R V106C N107K K108*     808/926
(87 %)
18 diff
(98.1 %id)
TI_44167053   .a 27 to 887 125 to 987 exact     863/988
(87 %)
16 diff
(98.4 %id)
TI_44171923   .a 27 to 834 91 to 897 K104T D105R V106C N107K K108*     807/1015
(79 %)
21 diff
(98.0 %id)
NM_173794.3   .a 27 to 1196 1 to 1170 exact RefSeq,   1170/1170
(100 %)
0 diff
(100 %id)
BC042813 Brain, hippocampus .a 32 to 1178 1 to 1148 exact tiling clone, available from MGC, AAA   1148/1148
(100 %)
4 diff
(99.7 %id)
TI_45208976   .a 37 to 935 80 to 966 N34D     887/967
(91 %)
39 diff
(96.0 %id)
BI596548 brain, hypothalamus .a 38 to 935 1 to 886 N34D     886/887
(99 %)
38 diff
(95.8 %id)
CD700176 normal nasopharynx .a 40 to 456 14 to 430       417/430
(96 %)
5 diff
(98.9 %id)
DB493773 hypothalamus .a 45 to 541 1 to 497       497/497
(100 %)
2 diff
(99.6 %id)
DB488199 hypothalamus .a 99 to 560 1 to 462       462/463
(99 %)
3 diff
(99.4 %id)
BX282441 embryonal carcinoma, cell line, testis .a 138 to 626 1 to 489       489/489
(100 %)
0 diff
(100 %id)
BQ220222 embryonal carcinoma, cell line, testis .a 140 to 981 1 to 854 exact     854/856
(99 %)
15 diff
(98.3 %id)
TI_159693572   .a 141 to 1046 52 to 958 exact   Submitted on the opposite strand 907/1144
(79 %)
24 diff
(98.0 %id)
BC035015 Brain, hippocampus .a 143 to 1195 1 to 1052 exact available from MGC, AAA   1052/1052
(100 %)
2 diff
(99.9 %id)
CD389571 embryonic trophoblasts, made from WA01 stemcells .a 143 to 1020 21 to 911 L150M     891/917
(97 %)
29 diff
(96.9 %id)
BI598082 brain, hypothalamus .a 143 to 930 1 to 801 V146R G148R F149L L150F L151A ...     801/968
(82 %)
26 diff
(97.4 %id)
BG700106 brain, hippocampus .a 147 to 887 9 to 740 A2R T3P R4E N5P P8Q ...     732/768
(95 %)
23 diff
(97.1 %id)
CB118016 brain .a 148 to 426 1 to 279       279/279
(100 %)
0 diff
(100 %id)
DB473083 hippocampus .a 148 to 611 1 to 466       466/466
(100 %)
14 diff
(97.0 %id)
DB496059 hypothalamus .a 148 to 637 1 to 491 L67P F68V Q69P K70E V71S ...     491/491
(100 %)
9 diff
(98.2 %id)
TI_45216666   .a 148 to 930 131 to 926 V146R G148R F149L L150F L151A ...     796/1093
(72 %)
28 diff
(97.5 %id)
BP871219 embryonal kidney .a 149 to 480 1 to 332       332/332
(100 %)
0 diff
(100 %id)
DT218546 brain .a 149 to 846 1 to 698 exact     698/698
(100 %)
2 diff
(99.8 %id)
CN367917 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 153 to 514 1 to 362       362/362
(100 %)
2 diff
(99.5 %id)
CN367916 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 160 to 672 1 to 515 F145I V146C G148R F149L L150F ...     515/515
(100 %)
2 diff
(99.7 %id)
TI_1948155865   .a 169 to 635 135 to 605       471/1497
(31 %)
16 diff
(99.0 %id)
TI_1948155888   .a 169 to 636 135 to 603       469/570
(82 %)
10 diff
(98.3 %id)
TI_1948156035   .a 169 to 636 133 to 601       469/597
(78 %)
13 diff
(97.9 %id)
TI_1948156224   .a 169 to 636 140 to 608       469/529
(88 %)
10 diff
(98.2 %id)
EL733793 mixed .a 170 to 636 1 to 468       468/629
(74 %)
4 diff
(99.4 %id)
EL733974 mixed .a 170 to 636 1 to 467       467/630
(74 %)
2 diff
(99.7 %id)
BM461507 eye, retinoblastoma .a 172 to 1009 48 to 889       842/991
(84 %)
19 diff
(98.1 %id)
CN367918 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 179 to 865 9 to 695       687/695
(98 %)
6 diff
(99.2 %id)
BQ631739 Pancreas, Purified pancreatic islet .a 185 to 781 1 to 597       597/597
(100 %)
1 diff
(99.9 %id)
FN081973 breast carcinoma .a 293 to 357 68 to 3     Submitted on the opposite strand 66/68
(97 %)
0 diff
(100 %id)
FN119463 breast carcinoma .a 377 to 463 1 to 87       87/87
(100 %)
4 diff
(95.5 %id)
AI636066 Kidney .a 397 to 945 548 to 1       548/548
(100 %)
3 diff
(99.5 %id)
L44560   .a 401 to 800 1 to 401       401/401
(100 %)
5 diff
(98.8 %id)
DN920481   .a 430 to 658 107 to 335       231/335
(68 %)
8 diff
(97.7 %id)
BQ632035 Pancreas, Purified pancreatic islet .a 446 to 1024 580 to 2       579/580
(99 %)
0 diff
(100 %id)
BU959085 mixed (pool of 40 RNAs) .a 455 to 1123 1 to 670       670/693
(96 %)
6 diff
(99.2 %id)
CN367915 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 473 to 1019 9 to 555   AAA   547/555
(98 %)
6 diff
(99.0 %id)
AW868025 stomach_normal .a 512 to 948 441 to 5       437/442
(98 %)
3 diff
(99.4 %id)
BG213042   .a 557 to 1180 1 to 622   tiling clone, AAA   622/622
(100 %)
9 diff
(98.6 %id)
BG220833   .a 560 to 1177 8 to 621   AAA   614/621
(98 %)
6 diff
(99.1 %id)
BI256389 cervical carcinoma cell line, cervix .a 597 to 1191 1 to 597       597/628
(95 %)
3 diff
(99.6 %id)
FN154183 breast carcinoma .a 602 to 673 75 to 1     Submitted on the opposite strand 75/76
(98 %)
3 diff
(96.1 %id)
BF381130 uterus_tumor .a 632 to 1034 20 to 418       399/418
(95 %)
6 diff
(98.6 %id)
BF910165 uterus_tumor .a 637 to 801 21 to 182       162/201
(80 %)
5 diff
(97.6 %id)
BQ380588 uterus_tumor .a 652 to 1029 380 to 1       380/380
(100 %)
7 diff
(98.2 %id)
BE092820 breast .a 655 to 1006 354 to 1     Submitted on the opposite strand 354/354
(100 %)
5 diff
(98.6 %id)
FN168505 breast carcinoma .a 666 to 760 92 to 1     Submitted on the opposite strand 92/92
(100 %)
4 diff
(95.7 %id)
BF910169 uterus_tumor .a 673 to 1072 403 to 3     Submitted on the opposite strand 401/403
(99 %)
0 diff
(100 %id)
CK902164 Pancreas, Purified pancreatic islet .a 673 to 985 313 to 1     Submitted on the opposite strand 313/313
(100 %)
2 diff
(99.4 %id)
DB569833 hypothalamus .a 685 to 1202 1 to 517     Submitted on the opposite strand 517/519
(99 %)
7 diff
(98.7 %id)
DB541838 hippocampus .a 719 to 1196 1 to 481     Submitted on the opposite strand 481/485
(99 %)
8 diff
(98.4 %id)
DB518625 testis .a 723 to 1193 1 to 472     Submitted on the opposite strand 472/474
(99 %)
4 diff
(99.2 %id)
DB567070 hypothalamus .a 726 to 1195 1 to 470     Submitted on the opposite strand 470/470
(100 %)
4 diff
(99.2 %id)
DB564826 hypothalamus .a 742 to 1202 1 to 461     Submitted on the opposite strand 461/463
(99 %)
4 diff
(99.2 %id)
BE938134 testis_normal .a 759 to 963 10 to 213       204/213
(95 %)
6 diff
(97.2 %id)
AI571940 adenocarcinoma, Pancreas .a 759 to 1178 420 to 1       420/420
(100 %)
0 diff
(100 %id)
BM743511 Ascites, stomach .a 780 to 1189 1 to 410   AAA   410/410
(100 %)
5 diff
(98.8 %id)
FN090935 breast carcinoma .a 796 to 887 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
FN097738 breast carcinoma .a 808 to 917 113 to 1     Submitted on the opposite strand 113/113
(100 %)
5 diff
(95.6 %id)
BF033615 adenocarcinoma, ovary .a 812 to 1195 1 to 384       384/388
(98 %)
1 diff
(99.8 %id)
FN163803 breast carcinoma .a 820 to 931 1 to 113       113/113
(100 %)
3 diff
(97.4 %id)
T25867   .a 842 to 1019 178 to 1       178/178
(100 %)
0 diff
(100 %id)
AW515133 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 857 to 1019 165 to 3       163/165
(98 %)
0 diff
(100 %id)
BP873571 embryonal kidney .b 1 to 572 1 to 572 L7* tiling clone,   572/582
(98 %)
25 diff
(95.8 %id)
CN413254 embryonic stem cells, cell lines H1, H7, andH9 .b 30 to 521 1 to 492 exact tiling clone,   492/492
(100 %)
0 diff
(100 %id)
BE177072 head_neck .c 1 to 413 1 to 418 T9H Q10P I11D V12C M13N ... tiling clone,   418/418
(100 %)
20 diff
(95.3 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC