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Gene ALDH1L1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
283 supporting clones for gene ALDH1L1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR749807 colon carcinoma .a 1 to 3179 1 to 3179 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 3179/3180
(99 %)
3 diff
(100.0 %id)
BX500047 Liver .a 226 to 634 158 to 566       491/566
(86 %)
9 diff
(98.5 %id)
TI_1948135445   .a 248 to 1174 129 to 1062       934/1416
(65 %)
54 diff
(96.2 %id)
TI_1948135799   .a 248 to 874 129 to 759       631/1372
(45 %)
16 diff
(98.9 %id)
TI_1948135800   .a 248 to 968 132 to 850       720/1401
(51 %)
25 diff
(98.3 %id)
TI_1948136156   .a 248 to 877 127 to 759       633/1356
(46 %)
26 diff
(98.1 %id)
TI_1948136157   .a 248 to 1106 125 to 984       860/1388
(61 %)
26 diff
(98.2 %id)
TI_1948136506   .a 248 to 949 123 to 828       706/1326
(53 %)
42 diff
(96.9 %id)
TI_1948136507   .a 248 to 1105 131 to 999       869/1435
(60 %)
31 diff
(97.9 %id)
CV025054 mixed .a 249 to 825 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DA633769 Kidney .a 422 to 1002 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA268456 caudate nucleus .a 449 to 1002 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BX488299   .a 548 to 1021 1 to 474       474/474
(100 %)
3 diff
(99.4 %id)
DA145713 amygdala .a 556 to 1130 2 to 576   tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
DA761638 tongue .a 560 to 1040 2 to 482   capped   481/481
(100 %)
1 diff
(99.8 %id)
DA682606 ovary .a 646 to 1201 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA630356 Kidney .a 808 to 1388 2 to 582   capped   581/582
(99 %)
2 diff
(99.7 %id)
BG287828 bladder, transitional cell papilloma, cell line .a 827 to 1498 1 to 676       676/1141
(59 %)
7 diff
(99.4 %id)
BF000505 colon, colon tumor, RER+ .a 990 to 1413 424 to 1       424/424
(100 %)
10 diff
(97.7 %id)
BG292026 bladder, transitional cell papilloma, cell line .a 998 to 1684 1 to 682       682/926
(73 %)
15 diff
(98.4 %id)
BM694359 eye, RPE and Choroid .a 1062 to 1515 1 to 454       454/454
(100 %)
0 diff
(100 %id)
BM704876 eye, RPE and Choroid .a 1062 to 1636 1 to 576       576/576
(100 %)
4 diff
(99.4 %id)
DA629076 Kidney .a 1099 to 1673 2 to 576   tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
BJ993690 hepatoblastoma .a 1102 to 1527 1 to 426       426/426
(100 %)
2 diff
(99.6 %id)
BG287392 bladder, transitional cell papilloma, cell line .a 1118 to 1725 1 to 619       619/1023
(60 %)
24 diff
(97.7 %id)
BG898203 cartilage .a 1172 to 1659 86 to 573       488/504
(96 %)
9 diff
(98.3 %id)
BQ636094 eye, retina .a 1238 to 1872 1 to 635       635/635
(100 %)
0 diff
(100 %id)
BQ882944 dorsal root ganglia .a 1305 to 2212 1 to 917       917/917
(100 %)
22 diff
(97.7 %id)
BG900723 cartilage .a 1351 to 1725 42 to 416       375/429
(87 %)
9 diff
(98.0 %id)
CD624306   .a 1413 to 1921 1 to 509       509/513
(99 %)
2 diff
(99.7 %id)
CD624307   .a 1413 to 1936 523 to 1       523/523
(100 %)
5 diff
(99.1 %id)
CD624300   .a 1549 to 2055 506 to 3       504/506
(99 %)
2 diff
(99.7 %id)
CD624301   .a 1549 to 2080 1 to 532       532/533
(99 %)
3 diff
(99.5 %id)
CD624302   .a 1549 to 2055 509 to 3       507/509
(99 %)
0 diff
(100 %id)
CD624303   .a 1549 to 2080 1 to 532       532/533
(99 %)
5 diff
(99.1 %id)
BX489016   .a 1559 to 2017 1 to 459       459/459
(100 %)
4 diff
(99.2 %id)
EB386855 eye, optic nerve .a 1648 to 2423 1 to 776       776/776
(100 %)
1 diff
(99.9 %id)
TI_151767317   .a 1653 to 2294 95 to 741       645/829
(77 %)
20 diff
(97.6 %id)
CD624304   .a 1736 to 2080 8 to 350       343/351
(97 %)
10 diff
(97.2 %id)
CD624305   .a 1736 to 2079 341 to 1       341/348
(97 %)
4 diff
(98.9 %id)
BF340129 brain, glioblastoma with EGFR amplification .a 1954 to 2596 33 to 680       648/843
(76 %)
17 diff
(98.0 %id)
BF971447 adrenal cortex carcinoma, cell line, adrenal gland .a 2037 to 2596 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
CV329175 nervous_tumor .a 2233 to 2649 417 to 1     Submitted on the opposite strand 417/417
(100 %)
1 diff
(99.8 %id)
CV329234 nervous_tumor .a 2233 to 2649 417 to 1     Submitted on the opposite strand 417/417
(100 %)
1 diff
(99.8 %id)
BG877144 head_neck .a 2268 to 2489 222 to 1       222/224
(99 %)
1 diff
(99.6 %id)
R67614 breast .a 2274 to 2644 1 to 376       376/379
(99 %)
8 diff
(97.9 %id)
BX118891 breast .a 2275 to 3028 1 to 754       754/754
(100 %)
2 diff
(99.8 %id)
BM708330 eye, RPE and Choroid .a 2317 to 2626 1 to 310   fully sequenced, Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 310/310
(100 %)
1 diff
(99.7 %id)
TI_149303268   .a 2327 to 3175 928 to 82   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 847/988
(85 %)
21 diff
(97.9 %id)
CA313462 Human Lung Epithelial cells, lung .a 2399 to 3175 789 to 17   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 773/773
(100 %)
3 diff
(99.7 %id)
W86343 liver and spleen .a 2412 to 2833 1 to 426   fully sequenced,   426/426
(100 %)
7 diff
(98.4 %id)
BU731255 eye, RPE and Choroid .a 2418 to 3177 774 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 756/756
(100 %)
6 diff
(99.3 %id)
BG260070 bladder, transitional cell papilloma, cell line .a 2422 to 3129 1 to 730   AAA   730/778
(93 %)
38 diff
(95.2 %id)
BQ328031 kidney_tumor .a 2423 to 2676 1 to 251       251/251
(100 %)
10 diff
(96.1 %id)
N76415 liver and spleen .a 2427 to 2900 1 to 481       481/487
(98 %)
18 diff
(96.4 %id)
BM707487 eye, eye anterior segment .a 2492 to 2852 1 to 361       361/361
(100 %)
8 diff
(97.8 %id)
BU732097 eye, RPE and Choroid .a 2565 to 3175 630 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 612/612
(100 %)
2 diff
(99.7 %id)
AI565698 anaplastic oligodendroglioma, brain .a 2584 to 3167 582 to 1       582/589
(98 %)
15 diff
(97.5 %id)
TI_151742401   .a 2596 to 3175 690 to 109   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 582/582
(100 %)
18 diff
(97.0 %id)
CB162161 Liver .a 2605 to 3170 565 to 1     Submitted on the opposite strand 565/565
(100 %)
1 diff
(99.9 %id)
H58302 liver and spleen .a 2630 to 2932 5 to 309   fully sequenced,   305/309
(98 %)
6 diff
(98.1 %id)
AI970775 normal prostate, Prostate .a 2637 to 3175 539 to 1       539/539
(100 %)
0 diff
(100 %id)
AA769864 liver and spleen .a 2652 to 3177 523 to 1       523/523
(100 %)
3 diff
(99.5 %id)
AI498811 anaplastic oligodendroglioma, brain .a 2652 to 3175 543 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 525/528
(99 %)
11 diff
(98.0 %id)
T60300.
matches multiple genes
Liver .a 2661 to 3100 1 to 443     also hits gene MT1X 443/443
(100 %)
10 diff
(97.8 %id)
BE855461 brain, glioblastoma (pooled) .a 2661 to 3175 515 to 1       515/515
(100 %)
0 diff
(100 %id)
F27996 pectoral muscle (after mastectomy) .a 2756 to 2848 1 to 93       93/93
(100 %)
3 diff
(96.8 %id)
BJ993691 hepatoblastoma .a 2786 to 3149 364 to 1       364/364
(100 %)
0 diff
(100 %id)
R67615 breast .a 2791 to 3176 386 to 1       386/391
(98 %)
9 diff
(97.7 %id)
W86344 liver and spleen .a 2803 to 3177 378 to 1   fully sequenced,   378/378
(100 %)
13 diff
(96.6 %id)
H58692 liver and spleen .a 2871 to 3176 308 to 2   fully sequenced,   307/308
(99 %)
0 diff
(100 %id)
BU734506 eye, RPE and Choroid .a 2897 to 3175 297 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 279/279
(100 %)
0 diff
(100 %id)
DC304792 cerebellum .b 1 to 571 4 to 574   tiling clone,   574/574
(100 %)
0 diff
(100 %id)
DC310719 cerebellum .b 259 to 846 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DA621004 Kidney .b 281 to 958 2 to 681   tiling clone, capped   680/745
(91 %)
3 diff
(99.6 %id)
DA635398 Kidney .b 289 to 872 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB320236 Kidney .b 2934 to 3438 505 to 1   tiling clone,   505/505
(100 %)
2 diff
(99.7 %id)
DC410149 thymus .c 1 to 589 6 to 594   tiling clone,   594/594
(100 %)
0 diff
(100 %id)
DC342268 thalamus .c 79 to 656 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC332038 hippocampus .c 88 to 652 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC319612 brain .c 140 to 716 1 to 577       577/577
(100 %)
6 diff
(99.0 %id)
BX646963 Liver .c 176 to 856 1 to 681       681/681
(100 %)
2 diff
(99.8 %id)
BI829048 brain, medulla .c 239 to 996 1 to 763       763/763
(100 %)
9 diff
(98.9 %id)
TI_57175779   .c 239 to 996 74 to 836       763/836
(91 %)
15 diff
(98.3 %id)
NM_012190.2   .c 239 to 3363 1 to 3125   RefSeq,   3125/3125
(100 %)
0 diff
(100 %id)
DA160550 amygdala .c 246 to 816 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
AL713273 human skeletal muscle .c 257 to 761 1 to 506       506/506
(100 %)
3 diff
(99.5 %id)
DB087792 testis .c 267 to 812 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA061757 cerebellum .c 268 to 819 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA634943 Kidney .c 268 to 835 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA417125 thalamus .c 271 to 830 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AB209299 brain .c 272 to 3355 1 to 3084 D793G tiling clone,   3084/3084
(100 %)
1 diff
(100.0 %id)
DA388914 thalamus .c 273 to 866 2 to 595   capped   594/595
(99 %)
2 diff
(99.7 %id)
DB449593 testis .c 274 to 730 1 to 455       455/457
(99 %)
22 diff
(95.2 %id)
DA345563 substantia nigra .c 275 to 845 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
DA869692 Prostate .c 275 to 805 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
DA738951   .c 277 to 777 2 to 502   capped   501/501
(100 %)
0 diff
(100 %id)
BX331810 Neuroblastoma Cot 25-normalized .c 290 to 1292 1 to 1002       1002/1073
(93 %)
22 diff
(98.0 %id)
BG707181 brain, hypothalamus .c 290 to 955 1 to 665       665/665
(100 %)
4 diff
(99.4 %id)
DA182990 amygdala .c 295 to 853 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA191463 amygdala .c 295 to 879 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA209154 brain .c 295 to 858 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA093719 cerebellum .c 296 to 727 2 to 433   capped   432/563
(76 %)
5 diff
(99.2 %id)
DA114769 cerebellum .c 296 to 883 2 to 589   capped   588/590
(99 %)
2 diff
(99.7 %id)
DA120070 cerebellum .c 296 to 817 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DA151948 amygdala .c 296 to 874 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA175890 amygdala .c 296 to 869 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA186275 amygdala .c 296 to 868 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA305695 hippocampus .c 296 to 856 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA332401 hippocampus .c 296 to 879 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA567216 heart .c 296 to 860 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA622897 Kidney .c 296 to 877 2 to 584   capped   583/585
(99 %)
2 diff
(99.7 %id)
DA641295 Liver .c 296 to 826 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DB172558 kidney, tumor tissue .c 296 to 762 2 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
DB186147 liver, tumor tissue .c 296 to 863 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
AU100366   .c 297 to 596 1 to 300       300/300
(100 %)
5 diff
(98.4 %id)
AU102330   .c 297 to 346 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
AK222535 adipose tissue .c 297 to 3339 1 to 3043 S312G V330F S481G I843V     3043/3043
(100 %)
5 diff
(99.9 %id)
AK222694 brain .c 297 to 3366 1 to 3070 K285R tiling clone, AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 3070/3070
(100 %)
1 diff
(100.0 %id)
DB499986 hypothalamus .c 297 to 780 1 to 484       484/486
(99 %)
1 diff
(99.8 %id)
DA128602 cerebellum .c 298 to 872 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA156589 amygdala .c 298 to 853 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA186159 amygdala .c 298 to 791 2 to 495   capped   494/500
(98 %)
1 diff
(99.8 %id)
DA188184 amygdala .c 298 to 827 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA278980 corpus callosum .c 298 to 825 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA343448 substantia nigra .c 298 to 857 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA392323 thalamus .c 298 to 887 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA397824 thalamus .c 298 to 880 2 to 586   capped   585/585
(100 %)
3 diff
(99.5 %id)
DA633886 Kidney .c 298 to 821 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA637899 Liver .c 298 to 847 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA639356 Liver .c 298 to 856 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB188271 liver, tumor tissue .c 298 to 881 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB214142 trachea .c 298 to 852 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BG261244 bladder, transitional cell papilloma, cell line .c 305 to 1065 1 to 761       761/974
(78 %)
32 diff
(96.8 %id)
BI760383 pooled colon, kidney, stomach .c 307 to 964 1 to 655       655/667
(98 %)
17 diff
(97.5 %id)
DR004125 Liver .c 308 to 983 8 to 682       675/682
(98 %)
7 diff
(99.0 %id)
BI763868 pooled colon, kidney, stomach .c 309 to 1058 1 to 753       753/917
(82 %)
8 diff
(99.2 %id)
TI_57148154   .c 309 to 964 40 to 692       653/704
(92 %)
20 diff
(97.2 %id)
TI_57151678   .c 309 to 1058 31 to 783       753/947
(79 %)
13 diff
(98.7 %id)
BX500343 Liver .c 312 to 922 1 to 611       611/611
(100 %)
2 diff
(99.7 %id)
AF052732   .c 320 to 3354 1 to 3036 G63A F85S M176V E195K D470G ...     3036/3040
(99 %)
18 diff
(99.5 %id)
DB466573 hippocampus .c 323 to 767 1 to 444       444/445
(99 %)
3 diff
(99.4 %id)
DA155924 amygdala .c 326 to 874 2 to 557   capped   556/556
(100 %)
7 diff
(98.8 %id)
CB155117 brain .c 331 to 857 1 to 527       527/527
(100 %)
0 diff
(100 %id)
BX642613   .c 339 to 1069 1 to 731       731/735
(99 %)
2 diff
(99.8 %id)
AK308112 tongue .c 340 to 2537 1 to 2197       2197/2197
(100 %)
4 diff
(99.9 %id)
DA413878 thalamus .c 340 to 878 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DA120638 cerebellum .c 341 to 868 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA187872 amygdala .c 341 to 892 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA205150 brain .c 341 to 904 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA206361 brain .c 341 to 913 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA274149 corpus callosum .c 341 to 905 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA296401 hippocampus .c 341 to 860 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
DA404077 thalamus .c 341 to 889 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA630676 Kidney .c 341 to 877 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
DA767408 tongue .c 341 to 877 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA185093 amygdala .c 342 to 821 2 to 481   capped   480/480
(100 %)
2 diff
(99.6 %id)
DA197193 brain .c 342 to 1016 2 to 674   capped   673/673
(100 %)
5 diff
(99.3 %id)
DA634945 Kidney .c 342 to 912 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA128904 cerebellum .c 347 to 928 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DR004065 Liver .c 348 to 1058 7 to 724       718/732
(98 %)
6 diff
(99.2 %id)
DA635606 Kidney .c 353 to 916 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
BI761451 pooled colon, kidney, stomach .c 356 to 1054 1 to 688       688/704
(97 %)
17 diff
(97.6 %id)
TI_57147361   .c 356 to 1054 83 to 770       688/786
(87 %)
18 diff
(97.8 %id)
DB186006 liver, tumor tissue .c 358 to 934 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA011998 adrenal gland .c 360 to 912 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA622711 Kidney .c 360 to 904 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA291304 hippocampus .c 362 to 800 2 to 440   capped   439/439
(100 %)
0 diff
(100 %id)
DA341557 substantia nigra .c 362 to 919 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA642783 Liver .c 362 to 921 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA632017 Kidney .c 363 to 941 2 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
BI762475 pooled colon, kidney, stomach .c 372 to 1148 1 to 784       784/906
(86 %)
19 diff
(98.0 %id)
TI_57151084   .c 372 to 1256 32 to 921       890/937
(94 %)
38 diff
(96.0 %id)
BI765628 pooled colon, kidney, stomach .c 379 to 895 1 to 518       518/680
(76 %)
7 diff
(99.0 %id)
TI_57146953   .c 379 to 895 1 to 518       518/680
(76 %)
7 diff
(99.0 %id)
TI_149300155   .c 2269 to 3363 891 to 85   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 768/810
(94 %)
43 diff
(94.7 %id)
CB853202 Human Lung Epithelial cells, lung .c 2606 to 3355 766 to 17   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 750/750
(100 %)
2 diff
(99.8 %id)
R12249 liver and spleen .c 2609 to 2931 1 to 326     Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 326/327
(99 %)
9 diff
(97.3 %id)
AI819829 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 2610 to 3358 753 to 4       750/753
(99 %)
14 diff
(98.2 %id)
CB163858 Liver .c 2615 to 3173 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
CB164663 Liver .c 2615 to 3137 1 to 523       523/523
(100 %)
0 diff
(100 %id)
BU607875 Human Lung Epithelial cells, lung .c 2619 to 3355 753 to 17   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 737/738
(99 %)
2 diff
(99.8 %id)
BU730516 eye, RPE and Choroid .c 2624 to 3355 747 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 729/731
(99 %)
3 diff
(99.6 %id)
AW025349 Kidney .c 2652 to 3357 729 to 20   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 710/710
(100 %)
31 diff
(95.7 %id)
CA310610 Human Lung Epithelial cells, lung .c 2662 to 3357 714 to 17   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 698/698
(100 %)
2 diff
(99.8 %id)
BM705315 eye, RPE and Choroid .c 2666 to 3199 1 to 534       534/534
(100 %)
0 diff
(100 %id)
BM981308 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 2675 to 3355 698 to 17   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 682/682
(100 %)
3 diff
(99.6 %id)
AI538197 Kidney .c 2684 to 3138 1 to 455     Submitted on the opposite strand 455/461
(98 %)
5 diff
(99.0 %id)
AA639766 colon, colon tumor RER+ .c 2686 to 3363 694 to 21   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 674/675
(99 %)
20 diff
(97.1 %id)
AI953263 anaplastic oligodendroglioma, brain .c 2694 to 3356 672 to 10       663/672
(98 %)
19 diff
(97.2 %id)
T73872 Liver .c 2696 to 3052 1 to 365   fully sequenced,   365/365
(100 %)
9 diff
(97.6 %id)
AI858063 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 2697 to 3363 689 to 21   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 667/669
(99 %)
32 diff
(95.3 %id)
BU620799 cell lines, Chondrosarcoma .c 2702 to 3355 673 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 655/655
(100 %)
1 diff
(99.9 %id)
AV647807 corresponding non cancerous liver tissue .c 2708 to 3128 1 to 420     Submitted on the opposite strand 420/420
(100 %)
4 diff
(99.1 %id)
AW082261 pooled .c 2719 to 3357 672 to 33   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 640/644
(99 %)
30 diff
(95.4 %id)
CB162406 Liver .c 2759 to 3353 1 to 592       594/592
(100 %)
6 diff
(99.0 %id)
DB303642 brain .c 2816 to 3359 547 to 1       547/548
(99 %)
16 diff
(97.1 %id)
AI912513 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 2881 to 3367 519 to 35       485/523
(92 %)
9 diff
(98.3 %id)
AI816997 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 2881 to 3367 490 to 4       487/503
(96 %)
10 diff
(98.1 %id)
BM669044 eye, RPE and Choroid .c 2884 to 3355 490 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 472/472
(100 %)
0 diff
(100 %id)
DB571135 hypothalamus .c 2889 to 3355 1 to 468     Submitted on the opposite strand 468/468
(100 %)
2 diff
(99.6 %id)
AI309029 2 pooled tumors (clear cell type), Kidney .c 2889 to 3356 471 to 4       468/471
(99 %)
0 diff
(100 %id)
BM976292 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 2894 to 3363 489 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 471/471
(100 %)
3 diff
(99.4 %id)
H73801 liver and spleen .c 2905 to 3356 1 to 463       463/466
(99 %)
23 diff
(95.1 %id)
AI827177 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 2905 to 3356 456 to 5       452/457
(98 %)
3 diff
(99.4 %id)
AI362173 brain, glioblastoma (pooled) .c 2908 to 3355 448 to 1       448/449
(99 %)
4 diff
(99.2 %id)
DB529514 hippocampus .c 2918 to 3361 1 to 442     Submitted on the opposite strand 442/444
(99 %)
7 diff
(98.5 %id)
F34364 pectoral muscle (after mastectomy) .c 2921 to 3200 1 to 280       280/280
(100 %)
4 diff
(98.6 %id)
BG291350 bladder, transitional cell papilloma, cell line .c 2937 to 3355 1 to 417   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 417/417
(100 %)
2 diff
(99.6 %id)
AA470882 colon .c 2940 to 3358 420 to 4       417/420
(99 %)
1 diff
(99.8 %id)
DB514660 testis .c 2942 to 3357 1 to 417     Submitted on the opposite strand 417/417
(100 %)
3 diff
(99.3 %id)
AI497665 anaplastic oligodendroglioma, brain .c 2947 to 3355 423 to 18   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 406/408
(99 %)
7 diff
(98.3 %id)
DB533403 hippocampus .c 2948 to 3360 1 to 414     Submitted on the opposite strand 414/417
(99 %)
11 diff
(97.4 %id)
AI289943 Kidney, renal cell tumor .c 2951 to 3363 416 to 5       412/421
(97 %)
1 diff
(99.8 %id)
AI240154 pooled .c 2960 to 3358 399 to 3       397/399
(99 %)
2 diff
(99.5 %id)
AI241096 Kidney .c 2982 to 3355 385 to 13   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 373/373
(100 %)
4 diff
(99.0 %id)
AI421632 brain, glioblastoma (pooled) .c 2982 to 3358 381 to 6       376/381
(98 %)
1 diff
(99.8 %id)
R16703 liver and spleen .c 3000 to 3362 388 to 26   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 363/363
(100 %)
14 diff
(96.2 %id)
AI418639 brain, glioblastoma (pooled) .c 3019 to 3355 338 to 1       338/341
(99 %)
7 diff
(98.0 %id)
T74272 Liver .c 3022 to 3356 337 to 5   fully sequenced,   333/337
(98 %)
57 diff
(83.1 %id)
T52839 ovary .c 3041 to 3355 1 to 323   fully sequenced,   323/323
(100 %)
18 diff
(94.5 %id)
T52840 ovary .c 3062 to 3358 299 to 6   fully sequenced,   294/299
(98 %)
0 diff
(100 %id)
BQ189477 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3063 to 3357 1 to 295   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 295/295
(100 %)
0 diff
(100 %id)
C20935   .c 3076 to 3362 1 to 291       291/291
(100 %)
9 diff
(97.0 %id)
TI_151733979   .c 3080 to 3357 358 to 80   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 279/899
(31 %)
1 diff
(99.9 %id)
AI017429 Kidney .c 3104 to 3357 269 to 16   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 254/254
(100 %)
3 diff
(98.9 %id)
AI273029 Kidney, renal cell tumor .c 3104 to 3356 255 to 3       253/255
(99 %)
0 diff
(100 %id)
AA988257 2 pooled tumors (clear cell type), Kidney .c 3114 to 3365 252 to 3       250/252
(99 %)
0 diff
(100 %id)
AI915359 pooled .c 3114 to 3355 258 to 18   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 241/241
(100 %)
5 diff
(98.0 %id)
AW206867   .c 3135 to 3359 240 to 16   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 225/225
(100 %)
3 diff
(98.7 %id)
AI919089 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 3141 to 3356 225 to 9       217/225
(96 %)
0 diff
(100 %id)
T61677 Liver .c 3215 to 3355 141 to 1       141/144
(97 %)
9 diff
(93.8 %id)
AK294392 amygdala .d 1 to 2758 1 to 2758 F415L tiling clone,   2758/2758
(100 %)
1 diff
(100.0 %id)
DC316504 amygdala .d 1 to 580 1 to 580       580/580
(100 %)
0 diff
(100 %id)
AK307699 liver, tumor tissue .e 1 to 2191 2 to 2191 T148A D165G G539D L540F L541C ... tiling clone,   2191/2191
(100 %)
5 diff
(99.8 %id)
DB186089 liver, tumor tissue .e 1 to 585 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BC027241 Bladder, transitional cell papilloma .f 1 to 2799 1 to 2799 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 2799/2799
(100 %)
0 diff
(100 %id)
TI_1948136158   .f 743 to 1643 1019 to 122       898/1303
(68 %)
12 diff
(99.1 %id)
TI_1948135801   .f 844 to 1643 931 to 121       811/1353
(59 %)
15 diff
(98.9 %id)
TI_1948136508   .f 844 to 1643 920 to 122       799/1327
(60 %)
6 diff
(99.6 %id)
TI_1948135802   .f 853 to 1643 916 to 119       798/1147
(69 %)
18 diff
(98.5 %id)
TI_1948136159   .f 853 to 1643 928 to 122       807/1235
(65 %)
21 diff
(98.3 %id)
TI_1948135446   .f 870 to 1643 897 to 121       777/1301
(59 %)
10 diff
(99.3 %id)
TI_1948136509   .f 901 to 1643 870 to 120       751/1218
(61 %)
21 diff
(98.3 %id)
TI_1948135447   .f 903 to 1643 872 to 119       752/1197
(62 %)
22 diff
(98.2 %id)
BI008339 kidney_tumor .g -11 to 390 1 to 401   tiling clone,   401/401
(100 %)
19 diff
(95.3 %id)
DB235057 trachea .g 347 to 729 2 to 384   tiling clone, to resequence, capped   383/383
(100 %)
0 diff
(100 %id)
DB350245 trachea .g 1639 to 2147 509 to 1   tiling clone, to resequence,   509/513
(99 %)
6 diff
(98.9 %id)
TI_57170652   .h 1 to 720 24 to 761   tiling clone,   738/763
(96 %)
29 diff
(96.2 %id)
BI825579 brain, medulla .h 6 to 720 1 to 733   tiling clone,   733/735
(99 %)
25 diff
(96.6 %id)
BX390138 Neuroblastoma Cot 25-normalized .h 380 to 1243 1 to 870   tiling clone,   875/873
(100 %)
23 diff
(97.4 %id)
DC310696 cerebellum .i 1 to 567 1 to 567   tiling clone,   567/567
(100 %)
1 diff
(99.9 %id)
DA622869 Kidney .i 21 to 619 2 to 600   tiling clone, capped   599/599
(100 %)
0 diff
(100 %id)
AL133015 testis .i 516 to 3419 1 to 2904   tiling clone, available from DKFZ, AAA   2904/2904
(100 %)
2 diff
(100.0 %id)
AI380584 B-cell, chronic lymphotic leukemia .i 1344 to 1695 352 to 1       352/352
(100 %)
0 diff
(100 %id)
BG188430   .i 1763 to 2551 787 to 3   tiling clone, Submitted on the opposite strand 785/787
(99 %)
0 diff
(100 %id)
BG191542   .i 2162 to 2550 391 to 3   tiling clone, AAA Submitted on the opposite strand 389/424
(91 %)
0 diff
(100 %id)
BG194640   .i 2162 to 2549 390 to 3   AAA Submitted on the opposite strand 388/401
(96 %)
3 diff
(99.3 %id)
BG202870   .i 2162 to 2550 393 to 4     Submitted on the opposite strand 390/404
(96 %)
0 diff
(100 %id)
BC045645 testis .j 1 to 4603 1 to 4607 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 4607/4607
(100 %)
28 diff
(99.4 %id)
BI465369 testis .j 106 to 770 1 to 663   available from MGC,   663/684
(96 %)
15 diff
(97.9 %id)
DB082461 testis .j 4179 to 4735 2 to 560   tiling clone, capped   559/559
(100 %)
7 diff
(98.8 %id)
T18866   .k 1 to 307 1 to 307   tiling clone,   307/307
(100 %)
2 diff
(99.4 %id)
DB235773 trachea .k 273 to 811 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB231658 trachea .k 284 to 750 2 to 468   tiling clone, capped   467/467
(100 %)
0 diff
(100 %id)
DB117253 thymus .k 286 to 886 2 to 603   tiling clone, capped   602/602
(100 %)
1 diff
(99.9 %id)
DB152078 thymus .k 292 to 853 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
AI004041 pooled .k 775 to 1152 380 to 3   tiling clone,   378/380
(99 %)
0 diff
(100 %id)
DA167891 amygdala .l 1 to 582 2 to 583   tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
DB027912 testis .l 339 to 933 2 to 596   tiling clone, capped   595/595
(100 %)
3 diff
(99.5 %id)
DB336754 testis .l 1589 to 2139 551 to 1   tiling clone,   551/551
(100 %)
1 diff
(99.9 %id)
AK294530 amygdala .m 1 to 1010 1 to 1010 exact tiling clone,   1010/1010
(100 %)
1 diff
(100.0 %id)
DA193565 amygdala .m 2 to 597 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
BE865689 bladder, carcinoma, cell line .m 87 to 624 1 to 528       528/829
(63 %)
17 diff
(98.0 %id)
DC417933 trachea .n 1 to 570 1 to 570   tiling clone,   570/570
(100 %)
0 diff
(100 %id)
BX480000   .n 4 to 405 1 to 402       402/402
(100 %)
4 diff
(99.1 %id)
DC318486 amygdala .n 6 to 557 1 to 552       552/552
(100 %)
0 diff
(100 %id)
CB156284 brain .n 110 to 665 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DA196866 amygdala .n 115 to 661 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DB151547 thymus .n 131 to 689 2 to 561 D157G tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
CD691342 normal nasopharynx .o 1 to 516 28 to 543 exact tiling clone,   516/543
(95 %)
6 diff
(98.9 %id)
DA409790 thalamus .p 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)
1 diff
(99.9 %id)
DA390295 thalamus .q 1 to 584 2 to 585 exact tiling clone, capped   584/584
(100 %)
1 diff
(99.9 %id)
CA389208 eye, RPE/choroid Gene ALDH1L1, variant not shown       AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base)    
CA389209 eye, RPE/choroid Gene ALDH1L1, variant not shown         Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base)    
AV684396 hepatocellular carcinoma Gene ALDH1L1, variant not shown              
AV695956 hepatocellular carcinoma Gene ALDH1L1, variant not shown         Suspected internal deletion, this clone was ignored    
AK124908 hippocampus Gene ALDH1L1, variant not shown       available from FLJ, This clone was ignored    
CD692678 normal nasopharynx Gene ALDH1L1, variant not shown         This clone was ignored    
BI008662 kidney_tumor Gene ALDH1L1, variant not shown              
DB309607 hippocampus Gene ALDH1L1, variant not shown              
DA330037 hippocampus Gene ALDH1L1, variant not shown       capped      
AI915118 colon, colon tumor, RER+ Gene ALDH1L1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI870912 anaplastic oligodendroglioma, brain Gene ALDH1L1, variant not shown         This clone was ignored    
AW293652   Gene ALDH1L1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB054925 brain, glioblastoma (pooled) Gene ALDH1L1, variant not shown         Suspected internal deletion, this clone was ignored    
CB054926 brain, glioblastoma (pooled) Gene ALDH1L1, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948135444   Gene ALDH1L1, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC