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Gene FSD1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
264 supporting clones for gene FSD1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_024333.2   .a 1 to 1840 8 to 1847 exact RefSeq, AAA   1847/1847
(100 %)
0 diff
(100 %id)
BG709002 brain, hypothalamus .a 1 to 63 7 to 69       69/69
(100 %)
4 diff
(94.3 %id)
DA690632   .a 1 to 207 8 to 214   capped   213/213
(100 %)
0 diff
(100 %id)
DB033998 testis .a 1 to 568 7 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA079882 cerebellum .a 1 to 429 4 to 432   capped   431/463
(93 %)
1 diff
(99.8 %id)
DA122725 cerebellum .a 1 to 531 4 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
DA269857 caudate nucleus .a 1 to 541 4 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA319422 hippocampus .a 1 to 562 4 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA350343 substantia nigra .a 1 to 572 4 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA690794   .a 1 to 454 4 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
DA696165   .a 1 to 559 4 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB070801 testis .a 1 to 454 4 to 458   capped   457/457
(100 %)
3 diff
(99.4 %id)
AK315661 testis .a 1 to 1637 2 to 1638 exact     1638/1638
(100 %)
2 diff
(99.9 %id)
DA135834 alzheimer cortex .a 1 to 539 3 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DA511006 brain .a 1 to 583 2 to 584   tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
DA679256   .a 1 to 535 2 to 536   capped   535/535
(100 %)
3 diff
(99.5 %id)
DA684422   .a 1 to 529 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA692135   .a 1 to 585 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DB023159 testis .a 1 to 567 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
DB046714 testis .a 1 to 437 2 to 438   capped   437/437
(100 %)
3 diff
(99.4 %id)
BI914430 brain .a 8 to 712 1 to 706       706/706
(100 %)
1 diff
(99.9 %id)
TI_57238421   .a 8 to 839 30 to 862       833/862
(96 %)
13 diff
(98.5 %id)
TI_57242853   .a 8 to 712 84 to 789       706/789
(89 %)
6 diff
(99.3 %id)
CD243449 testis .a 12 to 488 16 to 496       481/1336
(36 %)
13 diff
(99.1 %id)
BI116731 lung, small cell carcinoma .a 18 to 848 1 to 833       833/939
(88 %)
26 diff
(97.3 %id)
DB052535 testis .a 21 to 566 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
BE778112 eye, retinoblastoma .a 23 to 821 1 to 793       793/981
(80 %)
28 diff
(97.2 %id)
BM808821 amelanotic melanoma, cell line, skin .a 35 to 945 30 to 943       914/1075
(85 %)
17 diff
(98.5 %id)
BM916586 amelanotic melanoma, cell line, skin .a 35 to 715 22 to 704       683/1208
(56 %)
12 diff
(99.1 %id)
AL520492 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 36 to 846 1 to 812       812/812
(100 %)
5 diff
(99.4 %id)
BM554376 amelanotic melanoma, cell line, skin .a 38 to 1078 14 to 1069       1056/1142
(92 %)
34 diff
(97.1 %id)
BM470349 eye, retinoblastoma .a 42 to 895 1 to 867       867/1042
(83 %)
23 diff
(97.8 %id)
CN256992 embryonic stem cells, DMSO-treated H9 cellline .a 43 to 368 1 to 326       326/326
(100 %)
0 diff
(100 %id)
TI_57214786   .a 46 to 840 82 to 883       802/887
(90 %)
19 diff
(97.9 %id)
BM916228 amelanotic melanoma, cell line, skin .a 49 to 946 1 to 903       903/1060
(85 %)
20 diff
(98.2 %id)
DB022067 testis .a 49 to 601 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DA140196 alzheimer cortex .a 50 to 597 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
BM544668 brain, hippocampus .a 50 to 1105 14 to 1077       1064/1102
(96 %)
20 diff
(98.2 %id)
BU520829 leiomyosarcoma, uterus .a 50 to 903 1 to 855       855/860
(99 %)
10 diff
(98.9 %id)
TI_57214785   .a 50 to 779 71 to 809       739/810
(91 %)
23 diff
(97.2 %id)
DA271314 caudate nucleus .a 51 to 584 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
BF312665 brain, neuroblastoma .a 51 to 685 1 to 635       635/635
(100 %)
2 diff
(99.7 %id)
BI752650 brain .a 51 to 840 1 to 797       797/801
(99 %)
14 diff
(98.3 %id)
BE618346 eye, retinoblastoma .a 54 to 803 1 to 748       748/1034
(72 %)
18 diff
(98.3 %id)
BM807332 brain, hippocampus .a 55 to 913 25 to 898       874/1138
(76 %)
32 diff
(97.2 %id)
DA005492   .a 57 to 622 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
BF346973 anaplastic oligodendroglioma with 1p/19qloss, brain .a 57 to 846 1 to 784       784/912
(85 %)
29 diff
(96.9 %id)
DA913784   .a 57 to 550 69 to 563   capped   495/562
(88 %)
19 diff
(96.7 %id)
DB294005   .a 58 to 902 2 to 847   capped   846/846
(100 %)
11 diff
(98.7 %id)
BP200759 amygdala .a 60 to 636 1 to 580       580/582
(99 %)
6 diff
(99.0 %id)
BP203186 coronary artery .a 60 to 641 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP212128 cerebrum .a 60 to 639 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DA531136 brain .a 60 to 671 2 to 613   capped   612/612
(100 %)
1 diff
(99.9 %id)
DB475705 hippocampus .a 60 to 527 1 to 468       468/468
(100 %)
1 diff
(99.8 %id)
DA612646   .a 60 to 636 2 to 581   capped   580/583
(99 %)
5 diff
(99.2 %id)
BP308906 brain .a 60 to 642 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA772345 brain .a 60 to 636 2 to 578   capped   577/578
(99 %)
1 diff
(99.9 %id)
DA793620 brain .a 60 to 609 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BP364720 lung .a 60 to 641 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB173875 kidney, tumor tissue .a 60 to 636 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DA000464   .a 61 to 582 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DA002253   .a 61 to 627 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
DA004439   .a 61 to 638 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA037536   .a 61 to 601 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA062830 cerebellum .a 61 to 619 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA067149 cerebellum .a 61 to 643 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA071512 cerebellum .a 61 to 628 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA075999 cerebellum .a 61 to 617 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA079113 cerebellum .a 61 to 629 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA124293 cerebellum .a 61 to 595 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA125210 cerebellum .a 61 to 601 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA170540 amygdala .a 61 to 628 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA173466 amygdala .a 61 to 577 2 to 521   capped   518/520
(99 %)
4 diff
(99.3 %id)
DA179734 amygdala .a 61 to 597 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA201106 brain .a 61 to 651 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA202662 brain .a 61 to 635 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA273148 caudate nucleus .a 61 to 619 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA282167 corpus callosum .a 61 to 628 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA356742 subthalamic nucleus .a 61 to 635 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA358235 subthalamic nucleus .a 61 to 636 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DA361494 subthalamic nucleus .a 61 to 611 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA366550 subthalamic nucleus .a 61 to 618 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA368546 subthalamic nucleus .a 61 to 628 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA370145 subthalamic nucleus .a 61 to 623 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA522630 brain .a 61 to 259 2 to 200   capped   199/199
(100 %)
0 diff
(100 %id)
DA527762 brain .a 61 to 634 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA529256 brain .a 61 to 665 2 to 606   capped   605/605
(100 %)
1 diff
(99.9 %id)
DA534458 brain .a 61 to 627 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BU553277 ovary, teratocarcinoma, cell line .a 61 to 902 1 to 845       845/887
(95 %)
5 diff
(99.5 %id)
DA606193   .a 61 to 605 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA609086   .a 61 to 525 2 to 466   capped   465/465
(100 %)
1 diff
(99.8 %id)
DA610227   .a 61 to 611 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA615457   .a 61 to 634 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA617496   .a 61 to 636 2 to 577   capped   576/577
(99 %)
2 diff
(99.7 %id)
DA617547   .a 61 to 638 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA619013   .a 61 to 601 2 to 542   capped   541/541
(100 %)
3 diff
(99.5 %id)
DA684657   .a 61 to 587 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DA690003   .a 61 to 604 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA731628   .a 61 to 805 2 to 751   capped   750/750
(100 %)
16 diff
(97.9 %id)
DA907895   .a 61 to 814 2 to 755   capped   754/754
(100 %)
2 diff
(99.8 %id)
DB052054 testis .a 61 to 619 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB053028 testis .a 61 to 632 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB058292 testis .a 61 to 592 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DB176648 kidney, tumor tissue .a 61 to 610 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
CR622875 Neuroblastoma Cot 25-normalized .a 62 to 1801 1 to 1740 exact     1740/1740
(100 %)
0 diff
(100 %id)
BP360202 thalamus .a 62 to 643 1 to 581       581/583
(99 %)
8 diff
(98.7 %id)
CB153084 brain .a 63 to 717 1 to 655       655/655
(100 %)
0 diff
(100 %id)
DA111239 cerebellum .a 63 to 619 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BP211822 cerebrum .a 63 to 643 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA701462   .a 63 to 601 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
BF528756 anaplastic oligodendroglioma with 1p/19qloss, brain .a 64 to 918 1 to 865       865/890
(97 %)
29 diff
(96.8 %id)
CX870081 embryonic stem .a 65 to 895 1 to 831       831/831
(100 %)
0 diff
(100 %id)
CR603556 B cells (Ramos cell line) Cot 25-normalized .a 68 to 1804 1 to 1737 exact     1737/1737
(100 %)
0 diff
(100 %id)
CR611611 fetal brain .a 68 to 1812 1 to 1745 exact     1745/1745
(100 %)
0 diff
(100 %id)
BX416597 neuroblastoma .a 68 to 1104 1 to 1036       1036/1036
(100 %)
16 diff
(98.5 %id)
AL538435 brain, fetal brain .a 68 to 944 1 to 876       876/876
(100 %)
6 diff
(99.4 %id)
BX445061 brain, fetal brain .a 68 to 1040 1 to 967       967/967
(100 %)
12 diff
(98.8 %id)
BX385359   .a 68 to 941 1 to 877   fully sequenced,   877/877
(100 %)
4 diff
(99.6 %id)
AY032617 Fibrosarcoma .a 71 to 1830 1 to 1760 exact tiling clone, AAA   1760/1760
(100 %)
2 diff
(99.9 %id)
BE261574 brain, neuroblastoma .a 71 to 717 1 to 656       656/709
(92 %)
18 diff
(97.5 %id)
BI093087 cervix .a 71 to 848 1 to 791       791/926
(85 %)
43 diff
(95.4 %id)
BX332044 Neuroblastoma Cot 25-normalized .a 72 to 848 1 to 787       787/787
(100 %)
27 diff
(96.6 %id)
BG024254 duodenal adenocarcinoma, cell line, small intestine .a 72 to 630 1 to 590       479/1152
(41 %)
21 diff
(98.2 %id)
CR610791 Neuroblastoma Cot 25-normalized .a 73 to 1806 1 to 1734 exact     1734/1734
(100 %)
0 diff
(100 %id)
AL524084 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 73 to 911 1 to 839   fully sequenced,   839/839
(100 %)
4 diff
(99.6 %id)
DR003365 fetal brain .a 74 to 758 29 to 713       685/713
(96 %)
6 diff
(99.2 %id)
BI757296 brain .a 76 to 743 1 to 672       672/958
(70 %)
15 diff
(98.5 %id)
TI_57220508   .a 76 to 743 35 to 706       672/992
(67 %)
25 diff
(97.5 %id)
DA205755 brain .a 77 to 662 2 to 587   capped   586/586
(100 %)
4 diff
(99.4 %id)
CR599769 fetal brain .a 77 to 1799 1 to 1723 exact     1723/1723
(100 %)
0 diff
(100 %id)
BX428841 brain, fetal brain .a 77 to 1081 1 to 1002       1002/1002
(100 %)
25 diff
(97.6 %id)
BX465049 brain, fetal brain .a 77 to 1100 1 to 1021       1021/1021
(100 %)
13 diff
(98.8 %id)
AL534984 brain, fetal brain .a 77 to 945 1 to 869   fully sequenced,   869/869
(100 %)
1 diff
(99.9 %id)
BI917049 brain .a 77 to 870 1 to 795       795/795
(100 %)
9 diff
(98.9 %id)
TI_57242335   .a 77 to 870 36 to 830       795/830
(95 %)
14 diff
(98.4 %id)
AL524618 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 78 to 1033 1 to 946   fully sequenced,   946/946
(100 %)
5 diff
(99.5 %id)
DT220790 brain .a 78 to 717 1 to 640       640/640
(100 %)
2 diff
(99.7 %id)
BP195279 brain .a 79 to 660 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP213230 cerebrum .a 79 to 657 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DB041236 testis .a 79 to 636 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA130319 alzheimer cortex .a 80 to 636 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA130462 alzheimer cortex .a 80 to 638 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
CN256989 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 80 to 729 1 to 651       651/651
(100 %)
2 diff
(99.7 %id)
DA794278 brain .a 80 to 419 2 to 341   capped   340/340
(100 %)
1 diff
(99.8 %id)
BG474280 eye, retinoblastoma .a 81 to 767 1 to 690       690/827
(83 %)
16 diff
(98.1 %id)
TI_59380684   .a 81 to 970 96 to 990       895/896
(99 %)
18 diff
(98.0 %id)
DA692556   .a 81 to 631 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
AL514282 neuroblastoma, placenta .a 82 to 1040 1 to 959   fully sequenced,   959/959
(100 %)
5 diff
(99.5 %id)
CR602397 neuroblastoma .a 82 to 1828 1 to 1747 exact     1747/1747
(100 %)
0 diff
(100 %id)
TI_57238692   .a 82 to 986 26 to 938       913/939
(97 %)
24 diff
(97.5 %id)
BM011517 brain, neuroblastoma, cell line .a 83 to 970 1 to 893       893/894
(99 %)
18 diff
(98.0 %id)
BI912928 brain .a 86 to 986 1 to 909       909/910
(99 %)
21 diff
(97.7 %id)
TI_57243235   .a 89 to 848 38 to 800       763/822
(92 %)
16 diff
(98.1 %id)
BI918105 brain .a 90 to 848 1 to 762       762/784
(97 %)
10 diff
(98.8 %id)
BX353781 Neuroblastoma Cot 25-normalized .a 91 to 976 27 to 913   fully sequenced,   887/913
(97 %)
16 diff
(98.3 %id)
BM561105 amelanotic melanoma, cell line, skin .a 92 to 945 1 to 868       868/1117
(77 %)
21 diff
(98.2 %id)
BM559641 amelanotic melanoma, cell line, skin .a 92 to 1159 1 to 1069       1069/1072
(99 %)
33 diff
(97.0 %id)
BM912870 amelanotic melanoma, cell line, skin .a 93 to 761 1 to 673       673/1059
(63 %)
20 diff
(98.2 %id)
BM916517 amelanotic melanoma, cell line, skin .a 93 to 1152 1 to 1075       1075/1138
(94 %)
26 diff
(97.8 %id)
AK021750 whole embryo, mainly head .a 94 to 1831 1 to 1738 G295R available from FLJ,   1738/1738
(100 %)
3 diff
(99.9 %id)
BC003124 Brain, neuroblastoma .a 94 to 1835 1 to 1742 exact tiling clone, available from MGC, AAA   1742/1742
(100 %)
1 diff
(100.0 %id)
BM808948 amelanotic melanoma, cell line, skin .a 94 to 1105 1 to 1029       1029/1046
(98 %)
36 diff
(96.6 %id)
AU119068 whole embryo, mainly head .a 95 to 911 2 to 824   capped   823/824
(99 %)
10 diff
(98.8 %id)
BM907117 brain, hippocampus .a 99 to 808 1 to 712       712/1158
(61 %)
21 diff
(98.2 %id)
AF316829   .a 104 to 1830 1 to 1728 L232V AAA   1728/1728
(100 %)
6 diff
(99.7 %id)
BX345933   .a 104 to 934 1 to 830       830/830
(100 %)
7 diff
(99.2 %id)
BI918591 brain .a 105 to 883 1 to 778       778/782
(99 %)
13 diff
(98.4 %id)
TI_57238477   .a 105 to 883 1 to 778       778/782
(99 %)
13 diff
(98.4 %id)
BF207092 brain, neuroblastoma .a 106 to 848 1 to 743       743/895
(83 %)
23 diff
(97.5 %id)
BI199324 brain, neuroblastoma .a 106 to 979 1 to 875       875/875
(100 %)
19 diff
(97.9 %id)
BU181451 eye, retinoblastoma .a 107 to 848 1 to 742       742/885
(83 %)
6 diff
(99.4 %id)
BE260994 brain, neuroblastoma .a 113 to 585 1 to 475       475/476
(99 %)
5 diff
(99.0 %id)
BE741433 adenocarcinoma cell line, ovary .a 116 to 940 1 to 834       834/835
(99 %)
20 diff
(97.7 %id)
DB493008 hypothalamus .a 126 to 593 1 to 468       468/468
(100 %)
0 diff
(100 %id)
BP308846 brain .a 131 to 710 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
AL566105 brain, fetal brain .a 161 to 941 80 to 857       778/857
(90 %)
28 diff
(96.8 %id)
BG108493 Bone, osteosarcoma, cell line .a 196 to 952 1 to 750       750/965
(77 %)
18 diff
(98.2 %id)
BF036964 adenocarcinoma, ovary .a 224 to 794 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
CD556976 brain, Pituitary .a 258 to 847 29 to 621       593/1071
(55 %)
14 diff
(98.7 %id)
CD518915 White Matter .a 259 to 1012 1 to 760       760/919
(82 %)
10 diff
(99.0 %id)
BF205194 muscle, rhabdomyosarcoma .a 437 to 1033 1 to 598       598/602
(99 %)
3 diff
(99.6 %id)
BE294449 muscle, rhabdomyosarcoma .a 457 to 1076 1 to 621       621/622
(99 %)
2 diff
(99.7 %id)
F12311 brain, total brain .a 478 to 731 1 to 252       252/252
(100 %)
2 diff
(99.3 %id)
BM793852 Ascites, stomach .a 486 to 1038 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BG472815 eye, retinoblastoma .a 499 to 985 1 to 487       487/487
(100 %)
2 diff
(99.6 %id)
T66405 whole brain .a 509 to 656 1 to 147       147/147
(100 %)
6 diff
(96.0 %id)
BE258007 eye, retinoblastoma .a 518 to 1191 1 to 668       668/720
(92 %)
12 diff
(98.4 %id)
BE257479 eye, retinoblastoma .a 518 to 1070 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BI197430 brain, neuroblastoma .a 559 to 1500 1 to 948       948/1127
(84 %)
55 diff
(95.2 %id)
BF569242 Kidney, renal carcinoma (ascites) .a 561 to 1191 1 to 640       640/899
(71 %)
28 diff
(96.9 %id)
BE313840 brain, neuroblastoma .a 579 to 1108 1 to 531       531/722
(73 %)
4 diff
(99.5 %id)
BX283528 eye, retinoblastoma .a 620 to 1140 1 to 521       521/521
(100 %)
1 diff
(99.9 %id)
CR735294 choriocarcinoma, placenta .a 636 to 1120 55 to 539       485/539
(89 %)
6 diff
(98.9 %id)
BE255498 eye, retinoblastoma .a 640 to 1277 1 to 636       636/645
(98 %)
4 diff
(99.4 %id)
AA633607 schizophrenic brain S-11 frontal lobe .a 649 to 1101 1 to 451     Submitted on the opposite strand 451/451
(100 %)
7 diff
(98.5 %id)
TI_1948075063   .a 706 to 1184 126 to 606       481/1028
(46 %)
18 diff
(98.3 %id)
TI_1948075064   .a 706 to 1445 126 to 867       742/1415
(52 %)
16 diff
(98.9 %id)
TI_1948075628   .a 706 to 1245 129 to 672       544/1422
(38 %)
23 diff
(98.4 %id)
CV023430 mixed .a 708 to 1332 1 to 625       625/626
(99 %)
5 diff
(99.3 %id)
TI_1948075342   .a 708 to 1354 142 to 789       648/1452
(44 %)
22 diff
(98.5 %id)
BE143167 head_neck .a 709 to 1043 10 to 344       335/344
(97 %)
11 diff
(96.9 %id)
BP208268 cerebellum .a 741 to 1321 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BX445060 brain, fetal brain .a 744 to 1797 1047 to 1       1047/1070
(97 %)
11 diff
(99.0 %id)
BX465048 brain, fetal brain .a 753 to 1798 1052 to 10       1043/1052
(99 %)
17 diff
(98.4 %id)
BX331859 Neuroblastoma Cot 25-normalized .a 839 to 1817 982 to 1       982/982
(100 %)
25 diff
(97.5 %id)
BX428840 brain, fetal brain .a 839 to 1825 987 to 1       987/987
(100 %)
29 diff
(97.1 %id)
AL520491 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 856 to 1816 954 to 1       954/958
(99 %)
15 diff
(98.5 %id)
AL524083 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 881 to 1806 926 to 1   fully sequenced,   926/926
(100 %)
22 diff
(97.7 %id)
AL538434 brain, fetal brain .a 882 to 1774 933 to 39       895/933
(95 %)
3 diff
(99.7 %id)
BX332375 Neuroblastoma Cot 25-normalized .a 915 to 1801 885 to 1   fully sequenced,   885/885
(100 %)
16 diff
(98.2 %id)
AL565728 brain, fetal brain .a 915 to 1796 884 to 5   fully sequenced,   880/884
(99 %)
1 diff
(99.9 %id)
BX364183   .a 915 to 1798 887 to 7   fully sequenced,   881/887
(99 %)
6 diff
(99.4 %id)
TI_1948075066   .a 931 to 1636 834 to 124       711/1151
(61 %)
13 diff
(98.9 %id)
BX345932   .a 942 to 1777 843 to 7       837/853
(98 %)
11 diff
(98.8 %id)
BX393945 Neuroblastoma Cot 25-normalized .a 948 to 1779 832 to 1       832/832
(100 %)
7 diff
(99.2 %id)
BE618843 eye, retinoblastoma .a 953 to 1807 872 to 16       857/915
(93 %)
50 diff
(94.6 %id)
TI_1948075344   .a 963 to 1636 801 to 126       676/1138
(59 %)
30 diff
(97.4 %id)
AL524617 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1003 to 1773 776 to 6   fully sequenced,   771/776
(99 %)
8 diff
(99.0 %id)
AL514281 neuroblastoma, placenta .a 1010 to 1828 818 to 1   fully sequenced,   818/818
(100 %)
19 diff
(97.7 %id)
BF526205 brain, glioblastoma with EGFR amplification .a 1037 to 1805 1 to 768       768/875
(87 %)
21 diff
(97.6 %id)
TI_1948075906   .a 1099 to 1636 664 to 124       541/1102
(49 %)
18 diff
(98.4 %id)
TI_1948075630   .a 1100 to 1636 661 to 122       540/1092
(49 %)
13 diff
(98.9 %id)
TI_1948075343   .a 1105 to 1636 659 to 124       536/1396
(38 %)
17 diff
(98.8 %id)
BX412655 brain, fetal brain .a 1106 to 1833 733 to 1       733/893
(82 %)
14 diff
(98.5 %id)
TI_1948075065   .a 1136 to 1636 628 to 125       504/1436
(35 %)
11 diff
(99.3 %id)
CA749067 cell lines, Chondrosarcoma .a 1198 to 1840 661 to 19   AAA   643/643
(100 %)
4 diff
(99.4 %id)
AL566104 brain, fetal brain .a 1267 to 1760 504 to 11       494/504
(98 %)
3 diff
(99.5 %id)
BM462170 eye, retinoblastoma .a 1276 to 1832 1 to 557   AAA   557/590
(94 %)
2 diff
(99.7 %id)
AU159694   .a 1279 to 1830 554 to 1       554/558
(99 %)
18 diff
(96.8 %id)
BM929547 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1310 to 1835 1 to 526   fully sequenced,   526/526
(100 %)
1 diff
(99.9 %id)
AI693644 carcinoid, lung .a 1332 to 1577 1 to 246     Submitted on the opposite strand 246/246
(100 %)
1 diff
(99.6 %id)
DB544520 hippocampus .a 1342 to 1830 1 to 488     Submitted on the opposite strand 488/488
(100 %)
6 diff
(98.8 %id)
AI292065 placenta .a 1373 to 1830 462 to 5       458/462
(99 %)
0 diff
(100 %id)
AU145495 whole embryo, mainly head .a 1393 to 1831 438 to 1       438/442
(99 %)
3 diff
(99.4 %id)
DB564086 hypothalamus .a 1404 to 1830 1 to 427     Submitted on the opposite strand 427/427
(100 %)
4 diff
(99.1 %id)
BU960225 mixed (pool of 40 RNAs) .a 1455 to 1835 1 to 381       381/382
(99 %)
3 diff
(99.3 %id)
BF513717   .a 1462 to 1830 386 to 18   AAA   369/369
(100 %)
0 diff
(100 %id)
BF516407   .a 1462 to 1828 384 to 18   AAA   367/367
(100 %)
11 diff
(97.1 %id)
R87684.
matches multiple genes
brain .a 1466 to 1810 350 to 6     also hits gene klawglawby 345/350
(98 %)
3 diff
(99.2 %id)
H51132.
matches multiple genes
brain .a 1467 to 1816 352 to 1     also hits gene klawglawby 352/353
(99 %)
5 diff
(98.6 %id)
BM683389 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1467 to 1835 387 to 19   fully sequenced, AAA   369/369
(100 %)
0 diff
(100 %id)
H41239 brain .a 1506 to 1822 326 to 9       318/326
(97 %)
0 diff
(100 %id)
H39024 brain .a 1528 to 1829 304 to 1       304/304
(100 %)
5 diff
(98.4 %id)
AI564859 anaplastic oligodendroglioma, brain .a 1547 to 1830 298 to 15   AAA   284/284
(100 %)
1 diff
(99.7 %id)
AI468054 anaplastic oligodendroglioma, brain .a 1572 to 1837 273 to 6       268/273
(98 %)
0 diff
(100 %id)
AW004052 pooled germ cell tumors .a 1585 to 1828 245 to 2       244/245
(99 %)
0 diff
(100 %id)
BG913686 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1586 to 1835 1 to 250   AAA   250/250
(100 %)
0 diff
(100 %id)
F11040 brain, total brain .a 1599 to 1830 231 to 1       231/231
(100 %)
1 diff
(99.6 %id)
AA703672   .a 1651 to 1835 200 to 17     Submitted on the opposite strand 184/200
(92 %)
0 diff
(100 %id)
AW074895 bone marrow, stem cell 34+/38+ .a 1743 to 1829 7 to 93     Submitted on the opposite strand 87/93
(93 %)
6 diff
(93.6 %id)
CR622179 Neuroblastoma Cot 25-normalized .b 1 to 1623 2 to 1624 exact     1624/1624
(100 %)
0 diff
(100 %id)
CR623547 Neuroblastoma Cot 25-normalized .b 1 to 1633 2 to 1634 exact tiling clone,   1634/1634
(100 %)
0 diff
(100 %id)
AL524165 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 1 to 833 2 to 835   fully sequenced,   835/835
(100 %)
3 diff
(99.7 %id)
AL524164 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 803 to 1607 829 to 24   fully sequenced,   806/829
(97 %)
4 diff
(99.6 %id)
AK303606 thymus .c 1 to 1508 1 to 1508   tiling clone,   1508/1508
(100 %)
2 diff
(99.9 %id)
DC341064 thalamus .c 1 to 546 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
DC371898   .c 1 to 533 1 to 533   tiling clone,   533/533
(100 %)
0 diff
(100 %id)
DC410522 thymus .c 1 to 606 1 to 606       606/606
(100 %)
2 diff
(99.7 %id)
BQ890482 brain, neuroblastoma, cell line .c 1404 to 2282 1 to 880   tiling clone,   880/889
(98 %)
7 diff
(99.3 %id)
BG910910 anaplastic oligodendroglioma with 1p/19qloss, brain .c 1432 to 1984 1 to 557       557/669
(83 %)
12 diff
(98.3 %id)
BC016442 Placenta, choriocarcinoma .c 1527 to 2972 1 to 1447 exact tiling clone, available from MGC, AAA   1447/1447
(100 %)
1 diff
(100.0 %id)
BQ953556 sciatic nerve .c 1761 to 2550 1 to 796       796/918
(86 %)
17 diff
(98.2 %id)
BF974174 B-cells, primary B-cells from tonsils (cell line) .d 1 to 782 1 to 792 L132P T133G G134R L135G K136L ... tiling clone,   790/951
(83 %)
15 diff
(98.5 %id)
BE143166 head_neck .d 260 to 560 24 to 324   tiling clone,   301/324
(92 %)
8 diff
(97.6 %id)
AI272177 brain, oligodendroglioma .d 752 to 1128 1 to 378   tiling clone, Submitted on the opposite strand 378/378
(100 %)
1 diff
(99.8 %id)
AI272197 brain, oligodendroglioma .d 752 to 1152 1 to 401   tiling clone, Submitted on the opposite strand 401/401
(100 %)
2 diff
(99.6 %id)
BM548761 duodenal adenocarcinoma, cell line, small intestine .e 1 to 975 1 to 982 exact tiling clone,   982/1037
(94 %)
32 diff
(97.0 %id)
CN256991 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 37 to 731 1 to 695 exact tiling clone,   695/697
(99 %)
3 diff
(99.6 %id)
AK295523 hippocampus .f 1 to 1073 1 to 1073 exact tiling clone,   1073/1073
(100 %)
2 diff
(99.9 %id)
DC330969 hippocampus .f 1 to 560 1 to 561 N26E S27L A28G K29E V30G ...     561/561
(100 %)
2 diff
(99.7 %id)
CD654913 Embryonic Stem cells .f 109 to 916 12 to 817   tiling clone,   806/851
(94 %)
18 diff
(97.9 %id)
D61552   .g 1 to 248 7 to 253 exact tiling clone,   253/253
(100 %)
2 diff
(99.3 %id)
AL524345 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized Gene FSD1, variant not shown       fully sequenced, This clone was ignored    
AL562340 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized Gene FSD1, variant not shown       fully sequenced, This clone was ignored    
CN256990 embryonic stem cells, DMSO-treated H9 cellline Gene FSD1, variant not shown         Suspected internal deletion, this clone was ignored    
AU155907 placenta Gene FSD1, variant not shown         This clone was ignored    
DA828666 placenta Gene FSD1, variant not shown       capped This clone was ignored    
BI755769 brain Gene FSD1, variant not shown         This clone was ignored    
BI670131 brain, hypothalamus Gene FSD1, variant not shown         This clone was ignored    
TI_57217197   Gene FSD1, variant not shown         This clone was ignored    
TI_44344578   Gene FSD1, variant not shown         This clone was ignored    
DB032410 testis Gene FSD1, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI