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Gene FSCN2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
41 supporting clones for gene FSCN2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA017631 eye, retina .a 1 to 454 1 to 457       457/458
(99 %)
13 diff
(97.2 %id)
AA046878 eye, retina .a 2 to 500 1 to 495       495/530
(93 %)
15 diff
(97.2 %id)
AA059324 eye, retina .a 2 to 498 1 to 487   tiling clone,   487/570
(85 %)
15 diff
(97.4 %id)
NM_001077182.2   .a 2 to 1742 1 to 1741 exact RefSeq, AAA   1741/1741
(100 %)
0 diff
(100 %id)
AA018553 eye, retina .a 7 to 312 1 to 307       307/307
(100 %)
7 diff
(97.8 %id)
TI_1520877295   .a 78 to 1019 948 to 4       945/1331
(70 %)
10 diff
(99.3 %id)
TI_1520877297   .a 86 to 725 647 to 8       640/1326
(48 %)
0 diff
(100 %id)
TI_1607547097   .a 86 to 1124 53 to 1090   tiling clone,   1038/1127
(92 %)
21 diff
(98.2 %id)
AI189621 placenta .a 790 to 1570 779 to 1       779/782
(99 %)
26 diff
(96.7 %id)
AW504446 lymph .a 795 to 1156 8 to 369       362/369
(98 %)
6 diff
(98.4 %id)
TI_154160598   .a 795 to 1455 84 to 740   tiling clone,   657/705
(93 %)
28 diff
(96.1 %id)
TI_157609387   .a 1006 to 1596 640 to 50       591/640
(92 %)
6 diff
(99.1 %id)
AA058860 eye, retina .a 1025 to 1588 558 to 1   tiling clone,   558/561
(99 %)
11 diff
(98.1 %id)
TI_157610095   .a 1048 to 1596 604 to 56   tiling clone,   549/605
(90 %)
7 diff
(98.9 %id)
AA018572 eye, retina .a 1136 to 1588 459 to 1       456/460
(99 %)
17 diff
(96.4 %id)
AA046412 eye, retina .a 1166 to 1588 419 to 1       419/419
(100 %)
11 diff
(97.4 %id)
NM_012418.3   .b 1 to 1669 1 to 1669 exact RefSeq, AAA   1669/1669
(100 %)
0 diff
(100 %id)
AF030165 retina .b 6 to 1669 1 to 1664 exact tiling clone, AAA   1664/1664
(100 %)
1 diff
(100.0 %id)
BM709287 eye, optic nerve .b 16 to 471 1 to 456       456/456
(100 %)
1 diff
(99.8 %id)
BC126295 Brain, cerebellum, PCR rescued clones .b 85 to 1661 1 to 1577 exact     1577/1577
(100 %)
1 diff
(100.0 %id)
BC130330 Brain, cerebellum, PCR rescued clones .b 85 to 1661 1 to 1577 exact     1577/1577
(100 %)
3 diff
(99.9 %id)
TI_1520877299   .b 236 to 1415 1187 to 1       1187/1187
(100 %)
43 diff
(96.4 %id)
TI_1971557183   .b 531 to 1661 1176 to 56     Submitted on the opposite strand 1121/1259
(89 %)
36 diff
(97.2 %id)
TI_1607547557   .b 557 to 1630 6 to 1080       1075/1087
(98 %)
20 diff
(98.2 %id)
TI_1971557171   .b 559 to 1661 1167 to 57     Submitted on the opposite strand 1111/1224
(90 %)
45 diff
(96.4 %id)
TI_1971557185   .b 573 to 1661 1145 to 55     Submitted on the opposite strand 1091/1277
(85 %)
22 diff
(98.3 %id)
TI_1971557173   .b 631 to 1661 1082 to 55     Submitted on the opposite strand 1028/1112
(92 %)
25 diff
(97.8 %id)
TI_1607547103   .b 647 to 1661 1101 to 75       1027/1121
(91 %)
18 diff
(98.4 %id)
TI_1971557175   .b 654 to 1661 1063 to 55     Submitted on the opposite strand 1009/1077
(93 %)
20 diff
(98.2 %id)
TI_1971557135   .b 693 to 1661 1029 to 56     Submitted on the opposite strand 974/1173
(83 %)
19 diff
(98.4 %id)
TI_1971557137   .b 783 to 1661 933 to 56     Submitted on the opposite strand 878/1036
(84 %)
14 diff
(98.7 %id)
TI_1971557177   .b 827 to 1661 903 to 60     Submitted on the opposite strand 844/926
(91 %)
25 diff
(97.4 %id)
AI703219 pooled .b 1036 to 1478 443 to 1       443/443
(100 %)
5 diff
(98.9 %id)
BQ186352 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1063 to 1507 1 to 445       445/445
(100 %)
1 diff
(99.8 %id)
BQ185852 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1063 to 1507 1 to 445       445/445
(100 %)
2 diff
(99.6 %id)
TI_151731255   .b 1063 to 1523 501 to 41       461/1069
(43 %)
5 diff
(99.6 %id)
TI_151730055   .b 1063 to 1515 498 to 46       453/1056
(42 %)
1 diff
(100.0 %id)
BU732435 eye, optic nerve .b 1064 to 1669 624 to 19   AAA   606/606
(100 %)
2 diff
(99.7 %id)
TI_151761866   .b 1123 to 1523 434 to 35       400/1021
(39 %)
7 diff
(99.4 %id)
BM929819 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1126 to 1507 1 to 381       381/381
(100 %)
1 diff
(99.8 %id)
BM932109 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1 to 743 1 to 742   tiling clone,   742/742
(100 %)
1 diff
(99.9 %id)
TI_151763538   .c 16 to 770 790 to 35       756/956
(79 %)
10 diff
(99.0 %id)
TI_151763159   .c 16 to 770 801 to 47   tiling clone,   755/1013
(74 %)
5 diff
(99.6 %id)
AA455294 ovarian tumor, ovary .c 754 to 1206 1 to 450   tiling clone, Submitted on the opposite strand 450/450
(100 %)
11 diff
(97.6 %id)
AA465013 ovarian tumor, ovary .c 1453 to 1815 360 to 1   tiling clone, Submitted on the opposite strand 360/360
(100 %)
4 diff
(98.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC