To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene FRMD3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
126 supporting clones for gene FRMD3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
TI_44171907   .a 1 to 697 83 to 779       697/910
(76 %)
18 diff
(98.1 %id)
BI552194 brain, hippocampus .a 4 to 697 1 to 694   available from MGC,   694/825
(84 %)
16 diff
(98.1 %id)
BC041376 Brain, hippocampus .a 9 to 2530 1 to 2521 M17* tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2521/2521
(100 %)
9 diff
(99.7 %id)
NM_174938.4   .a 14 to 2530 1 to 2517 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2517/2517
(100 %)
0 diff
(100 %id)
DA770485 brain .a 29 to 586 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DB457955 testis .a 33 to 362 1 to 330       330/441
(74 %)
2 diff
(99.6 %id)
CD109550 Human Placenta, placenta .a 35 to 362 28 to 355       328/881
(37 %)
1 diff
(99.9 %id)
BX403240 Placenta Cot 25-normalized .a 42 to 362 1 to 321       321/321
(100 %)
5 diff
(98.5 %id)
BX357492 Placenta Cot 25-normalized .a 43 to 362 1 to 319       319/319
(100 %)
2 diff
(99.4 %id)
DA497574 brain .a 46 to 618 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AW160536 brain, frontal lobe .a 55 to 785 1 to 731       731/731
(100 %)
18 diff
(97.6 %id)
AW162166 brain, frontal lobe .a 55 to 467 1 to 413       413/428
(96 %)
0 diff
(100 %id)
AW163186 brain, frontal lobe .a 55 to 683 1 to 630       630/630
(100 %)
2 diff
(99.7 %id)
DB485003 hypothalamus .a 63 to 362 1 to 298       298/452
(65 %)
6 diff
(98.7 %id)
DB500889 hypothalamus .a 63 to 548 1 to 486       486/486
(100 %)
0 diff
(100 %id)
BI597026 brain, hypothalamus .a 66 to 861 1 to 798       798/799
(99 %)
13 diff
(98.4 %id)
DA837833 placenta .a 68 to 362 2 to 296   capped   295/374
(78 %)
2 diff
(99.5 %id)
TI_45213378   .a 71 to 861 129 to 921       793/922
(86 %)
15 diff
(98.4 %id)
AK223597 Kidney .a 87 to 2079 1 to 1992 exact tiling clone,   1992/1992
(100 %)
1 diff
(100.0 %id)
AK297722   .a 96 to 2306 1 to 2210 exact     2210/2210
(100 %)
2 diff
(100.0 %id)
DC355004   .a 96 to 664 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
DA849637 placenta .a 97 to 643 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DA488791 brain .a 108 to 660 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BP871603 embryonal kidney .a 110 to 692 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
EF560742   .a 163 to 2530 1 to 2368 exact AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2368/2368
(100 %)
2 diff
(100.0 %id)
DN992723 brain, whole brain .a 164 to 722 4 to 561       558/561
(99 %)
7 diff
(98.8 %id)
EL733878 mixed .a 264 to 924 1 to 657       659/661
(99 %)
10 diff
(98.5 %id)
TI_1948156996   .a 264 to 1141 139 to 1018       880/1386
(63 %)
14 diff
(99.0 %id)
TI_1948157149   .a 264 to 1052 140 to 930       791/1379
(57 %)
20 diff
(98.6 %id)
TI_1948157311   .a 264 to 1217 136 to 1081   AAA   946/1304
(72 %)
28 diff
(97.9 %id)
TI_1948157471   .a 264 to 1172 138 to 1045   fully sequenced, AAA   908/1045
(86 %)
21 diff
(98.0 %id)
DA072493 cerebellum .a 272 to 845 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
TI_1948157472   .a 1136 to 2008 999 to 126   fully sequenced,   874/999
(87 %)
7 diff
(99.3 %id)
TI_1948156997   .a 1326 to 2008 813 to 126       688/1297
(53 %)
7 diff
(99.5 %id)
BU101887   .a 1377 to 2006 630 to 1       630/630
(100 %)
2 diff
(99.7 %id)
BX391666 Placenta Cot 25-normalized .a 1385 to 2196 816 to 6       811/816
(99 %)
0 diff
(100 %id)
BG216229   .a 1406 to 2187 1 to 780       780/781
(99 %)
21 diff
(97.4 %id)
AW971200   .a 1527 to 1937 111 to 521       411/521
(78 %)
6 diff
(98.9 %id)
EL593438 epidermis, skin .a 1642 to 2307 13 to 703       691/705
(98 %)
40 diff
(94.4 %id)
BG218323   .a 1856 to 2530 689 to 20   AAA Submitted on the opposite strand 670/813
(82 %)
19 diff
(97.7 %id)
BF110588 carcinoid, lung .a 1923 to 2533 611 to 1   tiling clone,   611/611
(100 %)
0 diff
(100 %id)
AW157211 brain, frontal lobe .a 1951 to 2537 587 to 1       587/587
(100 %)
1 diff
(99.9 %id)
AW156913 brain, frontal lobe .a 1973 to 2537 565 to 1       565/565
(100 %)
1 diff
(99.9 %id)
AW162146 brain, frontal lobe .a 2016 to 2537 522 to 1       522/522
(100 %)
1 diff
(99.9 %id)
BX357491 Placenta Cot 25-normalized .a 2021 to 2501 485 to 1       485/900
(53 %)
10 diff
(98.9 %id)
BE172879 head_neck .a 2034 to 2259 19 to 243       225/243
(92 %)
6 diff
(97.6 %id)
AI984360 Kidney .a 2056 to 2530 475 to 1       475/475
(100 %)
0 diff
(100 %id)
DB523451 testis .a 2063 to 2530 1 to 468     Submitted on the opposite strand 468/468
(100 %)
1 diff
(99.8 %id)
BX282606 brain, hypothalamus .a 2088 to 2551 471 to 7     Submitted on the opposite strand 465/471
(98 %)
0 diff
(100 %id)
AA613041 colon, colon tumor RER+ .a 2127 to 2534 409 to 2       408/409
(99 %)
0 diff
(100 %id)
AI026002 parathyroid gland, parathyroid tumor .a 2148 to 2535 388 to 1       388/388
(100 %)
1 diff
(99.8 %id)
AW612442 Kidney .a 2165 to 2530 366 to 1       366/366
(100 %)
2 diff
(99.5 %id)
AI540628 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 2180 to 2340 161 to 1       161/161
(100 %)
0 diff
(100 %id)
AI492565 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2357 to 2530 174 to 1       174/174
(100 %)
1 diff
(99.5 %id)
AY137774   .b 1 to 2301 1 to 2300 Q204R I510V tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2300/2300
(100 %)
8 diff
(99.7 %id)
BU618212 Cell Line, Chondrosarcoma .b 2217 to 2936 740 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 722/722
(100 %)
2 diff
(99.8 %id)
CA419470 Bone, Human Chondrosarcoma Cell Line .b 2303 to 2936 652 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 634/634
(100 %)
1 diff
(99.9 %id)
BU189443 melanotic melanoma, skin .b 2588 to 3357 1 to 783   tiling clone,   783/921
(85 %)
23 diff
(97.6 %id)
BE172664 head_neck .b 2781 to 3028 252 to 5     Submitted on the opposite strand 248/252
(98 %)
0 diff
(100 %id)
CV341786 head_neck .b 2781 to 3027 261 to 15     Submitted on the opposite strand 247/261
(94 %)
0 diff
(100 %id)
BQ226765 melanotic melanoma, skin .b 2809 to 3562 1 to 772   tiling clone,   772/891
(86 %)
30 diff
(96.7 %id)
BM353282 Pancreas, Purified pancreatic islet .b 3393 to 3676 40 to 319   tiling clone,   280/319
(87 %)
8 diff
(97.5 %id)
DB461738 testis .b 3397 to 3865 1 to 469   tiling clone,   469/476
(98 %)
7 diff
(98.6 %id)
CK825144 Pancreas, Purified pancreatic islet .b 3429 to 4005 1 to 577   tiling clone, Submitted on the opposite strand 577/577
(100 %)
4 diff
(99.4 %id)
W37267 parathyroid gland, parathyroid tumor .b 3548 to 3768 1 to 221       221/226
(97 %)
3 diff
(98.7 %id)
BF342448 brain, glioblastoma with EGFR amplification .b 3581 to 4300 1 to 704       704/933
(75 %)
21 diff
(97.8 %id)
BQ721348 sympathetic trunk .b 3691 to 4482 43 to 845   tiling clone,   803/974
(82 %)
21 diff
(97.9 %id)
W44877 parathyroid gland, parathyroid tumor .b 4146 to 4543 1 to 402     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 402/402
(100 %)
6 diff
(98.6 %id)
BX089823 ovarian tumor, ovary .b 4264 to 4964 1 to 701   tiling clone,   701/703
(99 %)
1 diff
(99.9 %id)
AA402220 ovarian tumor, ovary .b 4264 to 4700 1 to 437   fully sequenced,   437/437
(100 %)
0 diff
(100 %id)
AJ709154 heart .b 4372 to 4897 526 to 1     Submitted on the opposite strand 526/526
(100 %)
2 diff
(99.7 %id)
AA136407 lung, lung carcinoma .b 4465 to 4850 1 to 391       391/391
(100 %)
12 diff
(97.0 %id)
BF589413 pooled .b 4514 to 5058 545 to 1       545/545
(100 %)
6 diff
(98.9 %id)
AI808804 pooled .b 4537 to 5076 544 to 5       540/544
(99 %)
0 diff
(100 %id)
AI935782 Kidney .b 4549 to 5076 532 to 5   tiling clone,   528/532
(99 %)
0 diff
(100 %id)
AI927843 Kidney .b 4552 to 5060 533 to 24   AAA   510/522
(97 %)
0 diff
(100 %id)
BE221726 Kidney .b 4564 to 5075 512 to 1       512/512
(100 %)
0 diff
(100 %id)
AW270839 Kidney .b 4585 to 5075 491 to 1       491/491
(100 %)
3 diff
(99.4 %id)
AI627259 Kidney .b 4591 to 5072 484 to 3       482/484
(99 %)
0 diff
(100 %id)
AI628396 Kidney .b 4592 to 5073 482 to 1       482/482
(100 %)
1 diff
(99.8 %id)
AW772307 Kidney .b 4617 to 5075 459 to 1       459/459
(100 %)
2 diff
(99.6 %id)
BE677875 pooled .b 4625 to 5076 455 to 4       452/455
(99 %)
0 diff
(100 %id)
AI373540 Kidney .b 4629 to 5072 444 to 1       444/449
(98 %)
3 diff
(99.4 %id)
AA478404 ovarian tumor, ovary .b 4681 to 5072 392 to 1   fully sequenced,   392/392
(100 %)
1 diff
(99.8 %id)
AW075364 colon, juvenile granulosa tumor .b 4682 to 5072 394 to 1       394/394
(100 %)
8 diff
(98.0 %id)
AI015267   .b 4708 to 5076 369 to 1       369/369
(100 %)
0 diff
(100 %id)
W32094 parathyroid gland, parathyroid tumor .b 4742 to 5072 341 to 11   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 331/331
(100 %)
0 diff
(100 %id)
AI624361 adenocarcinoma, Pancreas .b 4759 to 5074 316 to 1       316/316
(100 %)
0 diff
(100 %id)
D45564 lung .b 4781 to 4998 1 to 219     Submitted on the opposite strand 219/219
(100 %)
2 diff
(99.1 %id)
BM874423   .b 4843 to 5003 1 to 161       161/161
(100 %)
0 diff
(100 %id)
W33203 parathyroid gland, parathyroid tumor .b 4860 to 5076 221 to 5       217/221
(98 %)
0 diff
(100 %id)
BM873990   .b 4939 to 5072 152 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 134/134
(100 %)
0 diff
(100 %id)
AK094281 cerebellum .c 1 to 1783 2 to 1784 exact tiling clone, available from FLJ,   1784/1784
(100 %)
1 diff
(100.0 %id)
DA058234 cerebellum .c 1 to 562 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BX390381 Placenta Cot 25-normalized .c 47 to 830 1 to 780       780/780
(100 %)
11 diff
(98.6 %id)
TI_1948236066   .c 1094 to 1559 1085 to 619     Submitted on the opposite strand 467/1136
(41 %)
17 diff
(98.6 %id)
T12450   .c 1131 to 1378 1 to 247       247/295
(83 %)
2 diff
(99.4 %id)
T12451   .c 1131 to 1378 251 to 5       247/255
(96 %)
0 diff
(100 %id)
TI_1948235818   .c 1132 to 1559 1047 to 610   tiling clone, Submitted on the opposite strand 438/1161
(37 %)
25 diff
(97.9 %id)
TI_1948236296   .c 1148 to 1559 1032 to 617     Submitted on the opposite strand 416/1172
(35 %)
10 diff
(99.2 %id)
TI_1948235598   .c 1181 to 1559 1007 to 616     Submitted on the opposite strand 392/1177
(33 %)
18 diff
(98.5 %id)
AA092216   .c 1210 to 1539 1 to 323       323/338
(95 %)
12 diff
(96.5 %id)
TI_1948236295   .c 1238 to 1559 945 to 620     Submitted on the opposite strand 326/1358
(24 %)
13 diff
(99.1 %id)
DB296773 cerebellum .c 1240 to 1783 544 to 1       544/544
(100 %)
1 diff
(99.9 %id)
AA493819 thyroid .c 1319 to 1497 1 to 179       179/179
(100 %)
1 diff
(99.5 %id)
AW607391 head_neck .c 1705 to 1863 170 to 12   tiling clone,   159/170
(93 %)
0 diff
(100 %id)
CV359884 placenta_normal .c 1805 to 1936 20 to 150   tiling clone,   131/152
(86 %)
5 diff
(96.8 %id)
TI_57172065   .d 1 to 885 27 to 913   tiling clone,   887/919
(96 %)
22 diff
(97.7 %id)
BC037253 Brain, adult medulla .d 3 to 1397 1 to 1395 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1395/1395
(100 %)
0 diff
(100 %id)
BI827685 brain, medulla .d 3 to 885 1 to 885       885/891
(99 %)
16 diff
(98.3 %id)
DB043441 testis .e 1 to 554 2 to 558   tiling clone, capped   557/557
(100 %)
6 diff
(99.0 %id)
DB450863 testis .e 149 to 629 1 to 480       480/480
(100 %)
3 diff
(99.4 %id)
DB040340 testis .e 172 to 744 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
CR743206   .e 651 to 1283 1 to 635   tiling clone,   635/638
(99 %)
4 diff
(99.4 %id)
BI831130 brain, medulla .f 1 to 938 1 to 935 L165W L181T V182G K183Q S184E ... tiling clone,   935/936
(99 %)
22 diff
(97.7 %id)
TI_57177180   .f 1 to 938 70 to 1004 L165W L181T V182G K183Q S184E ...     935/1005
(93 %)
27 diff
(97.4 %id)
BE275985 melanotic melanoma, skin .f 108 to 369 37 to 298       262/298
(87 %)
6 diff
(98.0 %id)
BC023560 Placenta, choriocarcinoma .f 108 to 1071 1 to 964 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 964/964
(100 %)
0 diff
(100 %id)
BE410916 choriocarcinoma, placenta .f 113 to 831 1 to 712   available from MGC,   712/746
(95 %)
17 diff
(97.8 %id)
BM715647 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 159 to 652 1 to 492   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 492/492
(100 %)
0 diff
(100 %id)
EL735203 mixed .f 218 to 856 1 to 639       639/639
(100 %)
0 diff
(100 %id)
BM712610 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 357 to 867 1 to 511       511/511
(100 %)
1 diff
(99.9 %id)
AA628472   .f 557 to 1048 494 to 1       494/494
(100 %)
10 diff
(98.0 %id)
DB516351 testis .f 607 to 1067 1 to 460     Submitted on the opposite strand 460/460
(100 %)
1 diff
(99.8 %id)
BM674088 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 622 to 1069 466 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 448/448
(100 %)
0 diff
(100 %id)
AA746863 alveolar rhabdomyosarcoma .f 812 to 1069 267 to 10       258/267
(96 %)
0 diff
(100 %id)
CD684716 normal nasopharynx .g 1 to 591 22 to 612 exact tiling clone,   591/612
(96 %)
6 diff
(99.1 %id)
AA913487 pooled .h 1 to 662 661 to 1 G7D F13L V15S Q17R tiling clone,   661/664
(99 %)
8 diff
(98.8 %id)
CB958267 Pooled-Glandular .i-u 1 to 718 1 to 735 exact tiling clone,   735/753
(97 %)
29 diff
(96.2 %id)
BX498162 Liver .j 1 to 274 1 to 274   tiling clone,   274/274
(100 %)
1 diff
(99.7 %id)
BG432588 Kidney .j 10 to 614 1 to 604   tiling clone,   604/604
(100 %)
2 diff
(99.7 %id)
DB527156 testis .k-u 1 to 458 1 to 458 exact tiling clone, Submitted on the opposite strand 458/460
(99 %)
2 diff
(99.6 %id)
AW139460   .k-u 110 to 460 368 to 18 R21Q tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 351/351
(100 %)
1 diff
(99.8 %id)
BX647549 human retina Gene FRMD3, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
BF670602 muscle (skeletal) Gene FRMD3, variant not shown         Suspected internal deletion, this clone was ignored    
BM666832 eye, human retina Gene FRMD3, variant not shown       fully sequenced, AAA Suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored    
BM695049 eye, human retina Gene FRMD3, variant not shown       fully sequenced, Suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C