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Gene ZBTB41TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
127 supporting clones for gene ZBTB41 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CD699546 normal nasopharynx .a 1 to 358 38 to 396   tiling clone,   359/396
(90 %)
8 diff
(98.0 %id)
DR001050 fetal brain .a 36 to 722 1 to 687       687/687
(100 %)
4 diff
(99.5 %id)
AY163816 brain .a 103 to 2428 1 to 2326   tiling clone,   2326/2326
(100 %)
0 diff
(100 %id)
NM_194314.2   .a 103 to 8576 1 to 8474 exact RefSeq,   8474/8474
(100 %)
0 diff
(100 %id)
DB224361 trachea .a 125 to 673 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BC132818 Brain, PCR rescued clones .a 139 to 7081 1 to 6944 exact tiling clone,   6944/6944
(100 %)
2 diff
(100.0 %id)
BC136600 Brain, PCR rescued clones .a 139 to 7081 1 to 6943 exact     6943/6943
(100 %)
2 diff
(100.0 %id)
TI_1752770792   .a 199 to 1295 1114 to 28       1087/1305
(83 %)
0 diff
(100 %id)
DW443418 Liver .a 806 to 1018 17 to 230       214/230
(93 %)
6 diff
(97.4 %id)
AI336159 lung .a 875 to 1268 394 to 1       394/394
(100 %)
1 diff
(99.8 %id)
T05514   .a 1151 to 1523 1 to 373       373/373
(100 %)
0 diff
(100 %id)
BM474036 leiomyosarcoma, uterus .a 1204 to 2051 37 to 888       852/1052
(80 %)
17 diff
(98.4 %id)
TI_1752770794   .a 1215 to 2284 1077 to 15       1163/1299
(89 %)
26 diff
(98.0 %id)
AK093518 testis .a 1291 to 2922 375 to 2006   available from FLJ,   1632/2006
(81 %)
7 diff
(99.7 %id)
AX748180   .a 1291 to 2922 375 to 2006       1632/2006
(81 %)
7 diff
(99.7 %id)
DN997343 breast cancer, Mammary gland (cancer tissue) .a 1354 to 2026 9 to 685       677/685
(98 %)
6 diff
(99.2 %id)
DA989797 synovial membrane tissue from rheumatioidarthritis .a 1574 to 2108 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
AY336933 placenta .a 1632 to 2935 1 to 1304       1304/1304
(100 %)
0 diff
(100 %id)
BF356898 head_neck .a 1885 to 2022 1 to 136       136/136
(100 %)
3 diff
(97.8 %id)
TI_1752770796   .a 2157 to 3314 1145 to 1       1145/1270
(90 %)
18 diff
(98.6 %id)
DB337855.
matches multiple genes
testis .a 2390 to 2922 534 to 1     also hits gene sparfly 534/534
(100 %)
1 diff
(99.9 %id)
BX640886 human fetal kidney .a 2398 to 7136 1 to 4740   available from DKFZ, AAA   4740/4740
(100 %)
7 diff
(99.9 %id)
AW856335 colon .a 2581 to 3111 552 to 22       531/566
(93 %)
0 diff
(100 %id)
AW856389 colon .a 2581 to 2783 23 to 225       203/233
(87 %)
3 diff
(98.8 %id)
TI_1752770786   .a 2657 to 3887 1214 to 6       1209/1322
(91 %)
0 diff
(100 %id)
BY995892   .a 2906 to 3538 17 to 649       633/649
(97 %)
6 diff
(99.1 %id)
DB349599 trachea .a 3272 to 3818 547 to 1       547/547
(100 %)
3 diff
(99.5 %id)
BX481476   .a 3582 to 4164 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
AV751762 Pituitary .a 3583 to 4190 1 to 605       605/664
(91 %)
16 diff
(97.6 %id)
DA221331 brain .a 3620 to 3978 2 to 360   capped   359/359
(100 %)
0 diff
(100 %id)
BX484282   .a 3656 to 4116 1 to 462       462/470
(98 %)
3 diff
(99.4 %id)
BX955111   .a 3774 to 3974 1 to 201       201/201
(100 %)
0 diff
(100 %id)
BG393746 embryonal carcinoma, cell line, testis .a 3892 to 4415 1 to 518       518/521
(99 %)
14 diff
(97.4 %id)
BX495648 Liver .a 3897 to 4389 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
DB467594 hippocampus .a 3897 to 4372 1 to 476       476/476
(100 %)
2 diff
(99.6 %id)
TI_1752770772   .a 3948 to 4984 1050 to 21   tiling clone,   1030/1263
(81 %)
0 diff
(100 %id)
BM151172 leukopheresis .a 4272 to 4532 262 to 3       260/264
(98 %)
0 diff
(100 %id)
DW457694 Liver .a 4457 to 4600 17 to 160       144/160
(90 %)
8 diff
(95.0 %id)
BX502056 Liver .a 4620 to 5155 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
AV660035 corresponding non cancerous liver tissue .a 4637 to 5007 1 to 371     Submitted on the opposite strand 371/371
(100 %)
0 diff
(100 %id)
TI_1752770788   .a 4766 to 5959 1183 to 3       1181/1316
(89 %)
0 diff
(100 %id)
DA102649 cerebellum .a 4769 to 5371 2 to 605   capped   604/604
(100 %)
1 diff
(99.9 %id)
DA413418 thalamus .a 4844 to 5388 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA246480 brain .a 4899 to 5474 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BM477815 leiomyosarcoma, uterus .a 4906 to 5743 1 to 850       850/1099
(77 %)
26 diff
(97.7 %id)
EB388491 eye, optic nerve .a 4987 to 5755 1 to 769       769/769
(100 %)
5 diff
(99.4 %id)
BI598483 brain, hypothalamus .a 5071 to 5873 1 to 812   available from MGC,   812/829
(97 %)
30 diff
(96.4 %id)
TI_45212032   .a 5075 to 5873 90 to 897       808/914
(88 %)
28 diff
(97.0 %id)
BC043426 Brain, hypothalamus .a 5076 to 8576 1 to 3500   available from MGC, AAA   3500/3500
(100 %)
7 diff
(99.8 %id)
DB489883 hypothalamus .a 5077 to 5517 1 to 443       443/444
(99 %)
11 diff
(97.6 %id)
DB498947 hypothalamus .a 5077 to 5472 1 to 399       399/403
(99 %)
11 diff
(97.3 %id)
DA104740 cerebellum .a 5087 to 5645 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA859127 placenta .a 5133 to 5692 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AW504447 lymph .a 5140 to 5620 1 to 482       482/482
(100 %)
9 diff
(98.2 %id)
TI_154160600   .a 5146 to 5838 83 to 768       686/698
(98 %)
37 diff
(94.7 %id)
CN413746 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 5210 to 5842 1 to 633       633/635
(99 %)
2 diff
(99.7 %id)
DB236010 trachea .a 5211 to 5792 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
DA361692 subthalamic nucleus .a 5467 to 6026 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
CN413747 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 5467 to 6237 1 to 774       774/774
(100 %)
7 diff
(99.1 %id)
BM751958 Ascites, stomach .a 5482 to 5909 1 to 433       433/433
(100 %)
15 diff
(96.6 %id)
AI275435 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5606 to 6044 446 to 10       437/446
(97 %)
0 diff
(100 %id)
AI601230 colon .a 5656 to 6049 394 to 1       394/394
(100 %)
0 diff
(100 %id)
BM542631 leiomyosarcoma, uterus .a 5870 to 6816 1 to 962       962/963
(99 %)
32 diff
(96.7 %id)
TI_1752769240   .a 5927 to 7087 1247 to 111       1137/1250
(90 %)
0 diff
(100 %id)
DA789976 brain .a 5979 to 6530 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA714679   .a 5997 to 6560 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
BQ229719 embryonal carcinoma, cell line, testis .a 6172 to 7076 1 to 912       912/913
(99 %)
13 diff
(98.6 %id)
TI_57243146   .a 6173 to 6862 24 to 712       689/712
(96 %)
6 diff
(99.2 %id)
BI918375 brain .a 6184 to 6862 1 to 679       679/679
(100 %)
1 diff
(99.9 %id)
DA182469 amygdala .a 6187 to 6772 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA155647 amygdala .a 6433 to 6986 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
AL036021 brain .a 6530 to 7045 1 to 516       516/516
(100 %)
1 diff
(99.9 %id)
DB534606 hippocampus .a 6701 to 7138 1 to 437     Submitted on the opposite strand 437/437
(100 %)
3 diff
(99.4 %id)
BE000881 breast_normal .a 6705 to 6876 21 to 191       171/197
(86 %)
3 diff
(98.5 %id)
AW150178 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 6719 to 7138 443 to 26   AAA   418/418
(100 %)
13 diff
(96.9 %id)
BU588833 mixed (pool of 40 RNAs) .a 6816 to 7138 1 to 323       323/358
(90 %)
2 diff
(99.5 %id)
BE785218 large cell carcinoma, lung .a 6821 to 7348 1 to 527       527/975
(54 %)
16 diff
(98.4 %id)
AI627626 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 6874 to 7138 294 to 30   AAA   265/265
(100 %)
11 diff
(95.9 %id)
BE890180 leiomyosarcoma, uterus .a 6875 to 7418 1 to 544   tiling clone,   544/545
(99 %)
2 diff
(99.7 %id)
BE164550 head_neck .a 6892 to 7237 1 to 346       346/346
(100 %)
9 diff
(97.4 %id)
D81916 brain .a 6938 to 7253 21 to 336       316/336
(94 %)
6 diff
(98.3 %id)
AW365345 head_neck .a 7106 to 7700 28 to 622       595/622
(95 %)
6 diff
(99.1 %id)
BQ356306 head_neck .a 7130 to 7635 1 to 505       505/505
(100 %)
11 diff
(97.9 %id)
CB959136 Pooled-Glandular .a 7139 to 7876 1 to 738       738/738
(100 %)
9 diff
(98.8 %id)
AW809292 stomach .a 7268 to 7825 1 to 554       554/554
(100 %)
13 diff
(97.7 %id)
AW809295 stomach .a 7269 to 7793 1 to 523       523/523
(100 %)
21 diff
(96.0 %id)
AW809291 stomach .a 7272 to 7702 18 to 445       428/447
(95 %)
12 diff
(97.4 %id)
AW809297 stomach .a 7282 to 7836 19 to 571       553/571
(96 %)
6 diff
(99.0 %id)
AW809288 stomach .a 7284 to 7851 1 to 568       568/568
(100 %)
3 diff
(99.5 %id)
BU184154 eye, retinoblastoma .a 7299 to 8104 12 to 829   tiling clone,   818/987
(82 %)
25 diff
(97.5 %id)
BM821756 stomach .a 7406 to 7929 1 to 524       524/524
(100 %)
0 diff
(100 %id)
BE141180 head_neck .a 7419 to 7957 546 to 10     Submitted on the opposite strand 537/546
(98 %)
0 diff
(100 %id)
BF247111 brain, glioblastoma .a 7465 to 8169 1 to 697       697/868
(80 %)
10 diff
(98.9 %id)
BE693680 breast .a 7567 to 8179 613 to 1       613/613
(100 %)
15 diff
(97.6 %id)
AW388038 stomach .a 7582 to 8193 612 to 5       608/612
(99 %)
0 diff
(100 %id)
AW388037 stomach .a 7637 to 8193 558 to 7       552/580
(95 %)
0 diff
(100 %id)
AW388030 stomach .a 7645 to 8193 558 to 11       548/558
(98 %)
0 diff
(100 %id)
AW388026 stomach .a 7663 to 8193 532 to 7       526/532
(98 %)
0 diff
(100 %id)
TI_149302659   .a 7719 to 8576 934 to 85   AAA   850/961
(88 %)
20 diff
(98.0 %id)
BG288830 bladder, transitional cell papilloma, cell line .a 7763 to 8486 1 to 721       721/725
(99 %)
5 diff
(99.4 %id)
EH314109   .a 7775 to 7835 1 to 62       62/62
(100 %)
1 diff
(98.4 %id)
AA526404 ovary .a 7788 to 8017 9 to 238       230/279
(82 %)
1 diff
(99.7 %id)
FN069615 breast carcinoma .a 7850 to 7929 1 to 80       80/80
(100 %)
3 diff
(96.3 %id)
CB243844 Human Lung Epithelial cells, lung .a 7861 to 8576 732 to 19   tiling clone, AAA   714/717
(99 %)
2 diff
(99.8 %id)
T49060 placenta .a 7870 to 8174 1 to 317       317/321
(98 %)
12 diff
(96.3 %id)
BM069818 Islets of Langerhans, Pancreas .a 7898 to 8246 1 to 349   fully sequenced,   349/349
(100 %)
6 diff
(98.3 %id)
BM980815 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 7940 to 8576 655 to 19   AAA   637/637
(100 %)
2 diff
(99.7 %id)
AU186124 skin .a 7988 to 8575 587 to 2       586/587
(99 %)
0 diff
(100 %id)
DB299254 cerebellum .a 7999 to 8576 578 to 1       578/581
(99 %)
3 diff
(99.5 %id)
AW299558 Kidney .a 8002 to 8578 578 to 2       577/578
(99 %)
0 diff
(100 %id)
AI018621 breast .a 8034 to 8575 542 to 1       542/542
(100 %)
4 diff
(99.3 %id)
AV720050 corresponding non cancerous liver tissue .a 8052 to 8564 513 to 1     Submitted on the opposite strand 513/513
(100 %)
1 diff
(99.9 %id)
BF109630 pooled .a 8097 to 8580 491 to 6       486/491
(98 %)
0 diff
(100 %id)
AW044273 pooled .a 8113 to 8580 473 to 6       468/473
(98 %)
0 diff
(100 %id)
CN295162 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 8118 to 8576 13 to 471   AAA   459/471
(97 %)
6 diff
(98.8 %id)
AI016669 Kidney .a 8118 to 8577 460 to 1       460/460
(100 %)
1 diff
(99.8 %id)
AW771175 colon, juvenile granulosa tumor .a 8120 to 8576 457 to 1       457/457
(100 %)
0 diff
(100 %id)
AI311668 2 pooled tumors (clear cell type), Kidney .a 8121 to 8576 490 to 35   AAA   456/456
(100 %)
0 diff
(100 %id)
BX101592 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 8137 to 8576 454 to 15   AAA   440/440
(100 %)
1 diff
(99.8 %id)
AI744836 ovary, tumor, 5 pooled (see description) .a 8153 to 8577 425 to 1       425/425
(100 %)
1 diff
(99.8 %id)
FN122076 breast carcinoma .a 8156 to 8261 1 to 110       110/110
(100 %)
5 diff
(95.5 %id)
DB559630 hypothalamus .a 8178 to 8575 1 to 397     Submitted on the opposite strand 397/398
(99 %)
10 diff
(97.5 %id)
AI811852 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 8179 to 8577 399 to 1       399/399
(100 %)
1 diff
(99.8 %id)
AA862919 Kidney .a 8195 to 8577 383 to 1       383/383
(100 %)
0 diff
(100 %id)
AA774100   .a 8202 to 8577 376 to 1       376/376
(100 %)
1 diff
(99.8 %id)
BM069578 Islets of Langerhans, Pancreas .a 8216 to 8587 375 to 4   fully sequenced,   372/375
(99 %)
9 diff
(97.6 %id)
AI678433 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 8242 to 8578 337 to 1       337/337
(100 %)
0 diff
(100 %id)
T49061 placenta .a 8247 to 8575 340 to 1       340/351
(96 %)
14 diff
(96.1 %id)
AI049654   .a 8359 to 8647 289 to 1   tiling clone,   289/289
(100 %)
0 diff
(100 %id)
AK128549 trachea .b 1 to 3779 1 to 3778 F182L tiling clone, available from FLJ,   3778/3778
(100 %)
5 diff
(99.9 %id)
BG611377 adenocarcinoma, Prostate Gene ZBTB41, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C