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Gene TRAFD1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
547 supporting clones for gene TRAFD1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX364121   .a 1 to 976 1 to 962   tiling clone,   962/969
(99 %)
16 diff
(98.4 %id)
BX364120   .a 1540 to 2660 1104 to 1   tiling clone,   1104/1108
(99 %)
24 diff
(97.9 %id)
DA184732 amygdala .b 1 to 499 2 to 499   tiling clone, capped   498/498
(100 %)
1 diff
(99.8 %id)
DA518570 brain .b 1 to 443 2 to 444   capped   443/443
(100 %)
0 diff
(100 %id)
DA825838 pericardium .b 1 to 525 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DB085467 testis .b 1 to 553 2 to 555   capped   554/556
(99 %)
3 diff
(99.5 %id)
DA095588 cerebellum .b 4 to 578 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
NM_001143906.1   .b 7 to 3184 1 to 3178 exact RefSeq, AAA   3178/3178
(100 %)
0 diff
(100 %id)
DA505363 brain .b 8 to 337 2 to 331   capped   330/330
(100 %)
0 diff
(100 %id)
DA800028 brain .b 8 to 465 2 to 461   capped   460/460
(100 %)
2 diff
(99.6 %id)
DB093748 testis .b 8 to 562 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB099758 testis .b 8 to 571 2 to 565   capped   564/565
(99 %)
1 diff
(99.9 %id)
DB137596 thymus .b 8 to 465 2 to 459   capped   458/458
(100 %)
0 diff
(100 %id)
DB145012 thymus .b 8 to 464 2 to 460   capped   459/459
(100 %)
2 diff
(99.6 %id)
DB150105 thymus .b 8 to 482 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
DA792994 brain .b 18 to 314 2 to 298   capped   297/297
(100 %)
0 diff
(100 %id)
DA445039 tongue, tumor tissue .b 21 to 591 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
AK122620 cerebellum .b 22 to 3184 1 to 3162 K283R G284V A285Q A286L D287T ... tiling clone, available from FLJ,   3162/3162
(100 %)
4 diff
(99.9 %id)
DA058552 cerebellum .b 23 to 525 2 to 504   capped   503/503
(100 %)
1 diff
(99.9 %id)
DA530862 brain .b 23 to 422 2 to 401   capped   400/400
(100 %)
0 diff
(100 %id)
DA756588   .b 23 to 572 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB083306 testis .b 30 to 581 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
BF306137 muscle, rhabdomyosarcoma .b 31 to 612 1 to 578       578/948
(60 %)
13 diff
(98.7 %id)
BG828961 muscle, rhabdomyosarcoma .b 31 to 743 1 to 710       710/710
(100 %)
6 diff
(99.2 %id)
BF306487 muscle, rhabdomyosarcoma .b 33 to 668 1 to 630       630/918
(68 %)
19 diff
(98.0 %id)
BQ436777 epithelioid carcinoma, Pancreas .b 39 to 813 43 to 825       783/948
(82 %)
45 diff
(95.3 %id)
BQ278769 adenocarcinoma, cell line, breast .b 40 to 616 1 to 579       579/1137
(50 %)
6 diff
(99.5 %id)
BU539725 adenocarcinoma, cell line, breast .b 40 to 344 1 to 306       306/1332
(22 %)
7 diff
(99.5 %id)
BU956428 adenocarcinoma, cell line, breast .b 40 to 674 1 to 635       635/972
(65 %)
10 diff
(99.0 %id)
DB081198 testis .b 43 to 514 2 to 474   capped   473/473
(100 %)
1 diff
(99.8 %id)
BE295162 muscle, rhabdomyosarcoma .b 51 to 602 1 to 559       559/559
(100 %)
10 diff
(98.3 %id)
BE270360 Burkitt lymphoma, lymph .b 51 to 750 1 to 709       709/716
(99 %)
33 diff
(95.4 %id)
CN291426 embryonic stem cells, DMSO-treated H9 cellline .b 63 to 443 1 to 381       381/382
(99 %)
1 diff
(99.8 %id)
DB083196 testis .b 69 to 630 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB296797 cerebellum .b 2648 to 3184 538 to 1       538/538
(100 %)
2 diff
(99.7 %id)
DA437990 tongue, tumor tissue .c 1 to 84 8 to 92   capped   91/91
(100 %)
1 diff
(99.0 %id)
BJ990928 hepatoblastoma .c 1 to 577 7 to 583   tiling clone,   583/583
(100 %)
0 diff
(100 %id)
DA443566 tongue, tumor tissue .c 1 to 559 7 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA465030   .c 1 to 563 7 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA490215 brain .c 1 to 534 7 to 542   capped   541/541
(100 %)
3 diff
(99.5 %id)
DA869537 Prostate .c 1 to 540 7 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DC411628 kidney, tumor tissue .c 1 to 385 36 to 420       390/390
(100 %)
0 diff
(100 %id)
DB202043 trachea .c 1 to 536 7 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB263346 uterus .c 1 to 560 7 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DA554640   .c 1 to 582 2 to 585   capped   582/584
(99 %)
3 diff
(99.5 %id)
CN396087 embryonic stem cells, DMSO-treated H9 cellline .c 3 to 645 1 to 642       642/642
(100 %)
1 diff
(99.9 %id)
BG716808 brain, hypothalamus .c 3 to 742 1 to 739       739/800
(92 %)
20 diff
(97.5 %id)
CD684746 normal nasopharynx .c 4 to 640 19 to 654       636/654
(97 %)
8 diff
(98.8 %id)
DC303742 cerebellum .c 8 to 269 1 to 263       263/263
(100 %)
3 diff
(98.9 %id)
DC314982 amygdala .c 8 to 386 1 to 380       378/380
(99 %)
1 diff
(99.8 %id)
DC350763 brain .c 8 to 485 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
DB458755 testis .c 8 to 456 1 to 449       449/449
(100 %)
0 diff
(100 %id)
BP282313 bone marrow .c 8 to 594 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DC367436   .c 8 to 312 1 to 305       305/305
(100 %)
0 diff
(100 %id)
DC375278 brain .c 8 to 473 1 to 467       467/467
(100 %)
3 diff
(99.4 %id)
DC378796   .c 8 to 365 1 to 358       358/358
(100 %)
0 diff
(100 %id)
DC384221 Prostate .c 8 to 458 1 to 451       451/451
(100 %)
0 diff
(100 %id)
DC390345 Spleen .c 8 to 398 1 to 391       391/391
(100 %)
0 diff
(100 %id)
DC414873 trachea .c 8 to 486 1 to 479       479/479
(100 %)
0 diff
(100 %id)
DA303622 hippocampus .c 9 to 568 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA388719 thalamus .c 9 to 603 2 to 597   capped   596/596
(100 %)
2 diff
(99.7 %id)
DA445192 tongue, tumor tissue .c 9 to 547 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DA455235 tongue, tumor tissue .c 9 to 599 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA480433   .c 9 to 568 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA483922 brain .c 9 to 523 2 to 517   capped   516/516
(100 %)
2 diff
(99.7 %id)
DA620676   .c 9 to 546 2 to 540   capped   539/541
(99 %)
4 diff
(99.3 %id)
DA644382   .c 9 to 591 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA677890   .c 9 to 597 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA743999   .c 9 to 509 2 to 503   capped   502/502
(100 %)
5 diff
(99.1 %id)
DA792076 brain .c 9 to 563 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA824290 pericardium .c 9 to 575 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA855720 placenta .c 9 to 581 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA869284 Prostate .c 9 to 547 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA879447 Prostate .c 9 to 509 2 to 502   capped   501/501
(100 %)
1 diff
(99.9 %id)
DA991653 synovial membrane tissue from rheumatioidarthritis .c 9 to 564 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DB000760 breast, tumor tissue .c 9 to 541 2 to 535   capped   534/534
(100 %)
2 diff
(99.7 %id)
DB198337 trachea .c 9 to 588 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DB244991 uterus, tumor tissue .c 9 to 575 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
DB247088   .c 9 to 534 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB282059 uterus .c 9 to 569 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
BG717965 testis .c 10 to 581 1 to 572       572/572
(100 %)
5 diff
(99.2 %id)
DC370752   .c 10 to 459 1 to 451       451/451
(100 %)
4 diff
(99.2 %id)
DA349283 substantia nigra .c 12 to 574 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AU098857   .c 12 to 311 1 to 300       300/300
(100 %)
10 diff
(96.7 %id)
AU131366   .c 12 to 775 2 to 764   capped   763/763
(100 %)
2 diff
(99.8 %id)
DA786167 brain .c 12 to 595 2 to 588   capped   587/587
(100 %)
5 diff
(99.2 %id)
DA860394 placenta .c 12 to 566 2 to 557   capped   556/556
(100 %)
3 diff
(99.5 %id)
DA960224 Spleen .c 12 to 547 2 to 538   capped   537/537
(100 %)
3 diff
(99.5 %id)
BP371642 testis .c 13 to 568 1 to 556       556/582
(95 %)
26 diff
(95.6 %id)
AK312601 brain .c 15 to 1849 1 to 1835 Q339*     1835/1835
(100 %)
1 diff
(100.0 %id)
CD693574 normal nasopharynx .c 15 to 635 34 to 654       621/654
(94 %)
6 diff
(99.1 %id)
NM_006700.2   .c 15 to 2661 1 to 2647 exact RefSeq, AAA   2647/2647
(100 %)
0 diff
(100 %id)
DA742752   .c 15 to 509 2 to 497   capped   496/496
(100 %)
4 diff
(99.2 %id)
DC380350 placenta .c 15 to 424 1 to 412       412/412
(100 %)
4 diff
(99.1 %id)
DA043392 bladder .c 16 to 580 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA046265 bladder .c 16 to 588 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA084875 cerebellum .c 16 to 589 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA160638 amygdala .c 16 to 594 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA201351 brain .c 16 to 534 2 to 521   capped   520/520
(100 %)
3 diff
(99.5 %id)
DA271514 caudate nucleus .c 16 to 537 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
DA349982 substantia nigra .c 16 to 572 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA392491 thalamus .c 16 to 600 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA465068   .c 16 to 573 2 to 560   capped   559/563
(99 %)
4 diff
(99.3 %id)
DA490050 brain .c 16 to 536 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA499400 brain .c 16 to 579 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA500749 brain .c 16 to 587 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
BP279023   .c 16 to 596 1 to 587       587/587
(100 %)
6 diff
(99.0 %id)
DA643949   .c 16 to 536 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA666951   .c 16 to 573 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA672475   .c 16 to 589 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AU129072   .c 16 to 509 2 to 496   capped   495/497
(99 %)
5 diff
(99.0 %id)
AU130304   .c 16 to 833 2 to 816   capped   815/815
(100 %)
6 diff
(99.3 %id)
DA786553 brain .c 16 to 576 2 to 566   capped   565/565
(100 %)
6 diff
(99.0 %id)
DA892041 rectum .c 16 to 556 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA931313 Spleen .c 16 to 547 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA935040 Spleen .c 16 to 592 2 to 578   capped   577/580
(99 %)
1 diff
(99.9 %id)
DA938062 Spleen .c 16 to 609 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA946150 Spleen .c 16 to 568 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
DA952331 Spleen .c 16 to 567 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DB167510 kidney, tumor tissue .c 16 to 579 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB183558 liver, tumor tissue .c 16 to 582 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB259073 uterus .c 16 to 510 2 to 497   capped   496/496
(100 %)
1 diff
(99.8 %id)
DA902859   .c 17 to 579 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
CD703039 normal nasopharynx .c 20 to 500 24 to 504       481/504
(95 %)
6 diff
(98.9 %id)
AL566021 brain, fetal brain .c 20 to 952 1 to 933       933/933
(100 %)
3 diff
(99.7 %id)
BX444905 brain, fetal brain .c 20 to 935 1 to 923       920/942
(97 %)
28 diff
(97.1 %id)
BI462649 testis .c 20 to 770 1 to 750       750/755
(99 %)
20 diff
(97.4 %id)
BM803629 leiomyosarcoma, uterus .c 20 to 952 1 to 946       946/1064
(88 %)
20 diff
(98.2 %id)
CD688092 normal nasopharynx .c 22 to 638 15 to 631       617/631
(97 %)
7 diff
(98.9 %id)
CD688941 normal nasopharynx .c 22 to 588 25 to 591       567/591
(95 %)
7 diff
(98.9 %id)
TI_57163339   .c 22 to 807 29 to 811       783/811
(96 %)
14 diff
(98.3 %id)
AU309898 neuroblastoma .c 22 to 616 1 to 596       596/600
(99 %)
10 diff
(98.4 %id)
AL522290 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 23 to 895 1 to 873       873/873
(100 %)
1 diff
(99.9 %id)
BG258463 embryonal carcinoma, cell line, testis .c 24 to 794 1 to 765       765/765
(100 %)
21 diff
(97.3 %id)
DN913087   .c 26 to 630 1 to 605       605/605
(100 %)
3 diff
(99.6 %id)
BG821569 adenocarcinoma cell line, colon .c 26 to 524 1 to 500       500/827
(60 %)
8 diff
(99.1 %id)
BG822228 adenocarcinoma cell line, colon .c 26 to 590 1 to 570       570/1020
(55 %)
18 diff
(98.3 %id)
CD699974 normal nasopharynx .c 27 to 432 27 to 432       406/432
(93 %)
6 diff
(98.7 %id)
BX462936 fetal liver, Liver .c 27 to 905 1 to 878       878/878
(100 %)
12 diff
(98.7 %id)
BI837900 pooled pancreas and spleen .c 27 to 807 1 to 778       778/778
(100 %)
5 diff
(99.4 %id)
BI465232 testis .c 27 to 581 7 to 555       549/555
(98 %)
17 diff
(97.0 %id)
DA142675 alzheimer cortex .c 28 to 568 2 to 543   capped   542/542
(100 %)
3 diff
(99.5 %id)
BF526099 brain, glioblastoma with EGFR amplification .c 28 to 747 1 to 713       711/717
(99 %)
19 diff
(97.4 %id)
DA672131   .c 28 to 615 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
CN396089 embryonic stem cells, cell lines H1, H7, andH9 .c 29 to 730 1 to 702       702/702
(100 %)
2 diff
(99.8 %id)
AU129265   .c 29 to 575 2 to 548   capped   547/547
(100 %)
4 diff
(99.3 %id)
AK291331 tongue .c 30 to 2175 1 to 2146 E138V     2146/2146
(100 %)
1 diff
(100.0 %id)
DA072415 cerebellum .c 30 to 600 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
DC313926 amygdala .c 30 to 477 1 to 449       449/449
(100 %)
3 diff
(99.4 %id)
DC322104 brain .c 30 to 375 1 to 346       346/346
(100 %)
0 diff
(100 %id)
DC329957 hippocampus .c 30 to 438 1 to 410       410/410
(100 %)
3 diff
(99.3 %id)
DA294538 hippocampus .c 30 to 603 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
BI261881 lymph, lymphoma, cell line .c 30 to 737 1 to 706       706/706
(100 %)
17 diff
(97.6 %id)
DC428147   .c 30 to 500 1 to 473       473/473
(100 %)
2 diff
(99.6 %id)
DA934802 Spleen .c 30 to 596 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
BP358530 mammary gland .c 30 to 611 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA022240   .c 31 to 593 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA041204 bladder .c 31 to 596 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA172939 amygdala .c 31 to 596 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA313419 hippocampus .c 31 to 578 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA378969 thalamus .c 31 to 591 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA394791 thalamus .c 31 to 536 2 to 506   capped   505/505
(100 %)
1 diff
(99.9 %id)
DA396769 thalamus .c 31 to 616 2 to 588   capped   587/587
(100 %)
3 diff
(99.5 %id)
AL516916 brain, neuroblastoma, neuroblastoma cells .c 31 to 943 1 to 904       904/911
(99 %)
16 diff
(98.3 %id)
DA433920 tongue, tumor tissue .c 31 to 527 2 to 498   capped   497/497
(100 %)
1 diff
(99.8 %id)
DA511343 brain .c 31 to 591 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BM922521 leukocyte .c 31 to 519 14 to 502       489/1327
(36 %)
8 diff
(99.4 %id)
DA674148   .c 31 to 615 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA765041 tongue .c 31 to 605 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA906002   .c 31 to 602 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA912826   .c 31 to 600 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
DA931980 Spleen .c 31 to 576 2 to 548   capped   545/547
(99 %)
1 diff
(99.9 %id)
DA950215 Spleen .c 31 to 593 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA956220 Spleen .c 31 to 578 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DB131282 thymus .c 31 to 536 2 to 511   capped   510/510
(100 %)
5 diff
(99.1 %id)
DB164098 thymus .c 31 to 596 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BQ058822 lymph, lymphoma, cell line .c 32 to 893 1 to 867       867/1018
(85 %)
13 diff
(98.8 %id)
BQ059382 lymph, lymphoma, cell line .c 32 to 1008 1 to 983       983/983
(100 %)
13 diff
(98.7 %id)
DB170995 kidney, tumor tissue .c 32 to 609 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
BU553758 ovary, teratocarcinoma, cell line .c 34 to 877 25 to 880       856/985
(86 %)
33 diff
(96.7 %id)
BM921228 pooled brain, lung, testis .c 36 to 950 14 to 940       927/1066
(86 %)
27 diff
(97.5 %id)
TI_57201468   .c 36 to 723 66 to 753       688/898
(76 %)
23 diff
(97.5 %id)
TI_57147883   .c 36 to 722 23 to 709       687/709
(96 %)
10 diff
(98.6 %id)
TI_57177648   .c 36 to 747 33 to 755       723/761
(95 %)
41 diff
(94.7 %id)
H08024 whole brain .c 37 to 541 1 to 517       517/518
(99 %)
11 diff
(97.9 %id)
DA464132   .c 38 to 589 2 to 554   capped   551/553
(99 %)
1 diff
(99.9 %id)
BM467859 leiomyosarcoma, uterus .c 38 to 1139 1 to 1105       1105/1107
(99 %)
18 diff
(98.4 %id)
CN396086 embryonic stem cells, cell lines H1, H7, andH9 .c 39 to 725 9 to 694       686/694
(98 %)
7 diff
(99.0 %id)
BX362789   .c 41 to 1128 1 to 1074       1074/1074
(100 %)
18 diff
(98.4 %id)
BI823223 pooled brain, lung, testis .c 41 to 804 1 to 767       767/828
(92 %)
25 diff
(97.0 %id)
BI760575 pooled colon, kidney, stomach .c 41 to 722 1 to 682       682/682
(100 %)
4 diff
(99.5 %id)
BI766483 pooled lung and spleen .c 41 to 747 1 to 718       718/724
(99 %)
35 diff
(95.2 %id)
BU848944 ovary, teratocarcinoma, cell line .c 41 to 746 9 to 715       707/943
(74 %)
14 diff
(98.6 %id)
T35623 lung .c 41 to 282 1 to 242       242/242
(100 %)
0 diff
(100 %id)
AW963837   .c 42 to 556 1 to 518       518/617
(83 %)
20 diff
(96.8 %id)
BM920896 pooled brain, lung, testis .c 42 to 952 1 to 922       922/1024
(90 %)
30 diff
(97.1 %id)
BM799841 eye, retinoblastoma .c 43 to 895 29 to 881       853/1139
(74 %)
28 diff
(97.6 %id)
BM470769 leiomyosarcoma, uterus .c 45 to 902 1 to 865       865/1073
(80 %)
15 diff
(98.7 %id)
AB007447 brain .c 47 to 2666 1 to 2618 exact     2618/2618
(100 %)
3 diff
(99.9 %id)
BY797869 eye .c 48 to 674 1 to 627       627/627
(100 %)
0 diff
(100 %id)
BM552423 leiomyosarcoma, uterus .c 49 to 836 1 to 797       797/1062
(75 %)
15 diff
(98.6 %id)
DN996173 breast cancer, Mammary gland (cancer tissue) .c 50 to 700 9 to 658       650/658
(98 %)
7 diff
(99.0 %id)
BM905581 embryonal carcinoma, cell line, testis .c 51 to 872 19 to 851       833/1035
(80 %)
39 diff
(96.3 %id)
BM544402 brain, hippocampus .c 51 to 1061 1 to 1010       1010/1010
(100 %)
11 diff
(99.0 %id)
BQ675074 epidermoid carcinoma, cell line, salivary gland .c 54 to 1027 1 to 976       976/983
(99 %)
12 diff
(98.8 %id)
FN162508 breast carcinoma .c 55 to 151 104 to 7     Submitted on the opposite strand 101/104
(97 %)
0 diff
(100 %id)
BE311670 Kidney, renal cell adenocarcinoma .c 59 to 878 1 to 812       812/908
(89 %)
19 diff
(98.0 %id)
BG177327 lymph, lymphoma, cell line .c 60 to 746 1 to 681       681/977
(69 %)
23 diff
(97.7 %id)
BG390038 embryonal carcinoma, cell line, testis .c 60 to 788 1 to 724       724/729
(99 %)
10 diff
(98.7 %id)
Z44726 brain, total brain .c 64 to 402 1 to 339       339/339
(100 %)
0 diff
(100 %id)
BG476663 melanotic melanoma, skin .c 68 to 747 1 to 684       684/730
(93 %)
18 diff
(97.6 %id)
R21288 whole brain .c 70 to 458 1 to 395       395/395
(100 %)
9 diff
(97.8 %id)
BG724418 testis .c 73 to 791 16 to 737       722/740
(97 %)
13 diff
(98.3 %id)
R61026 whole brain .c 78 to 538 1 to 473       473/473
(100 %)
15 diff
(96.9 %id)
BQ440972 melanotic melanoma, skin .c 80 to 886 1 to 816       816/870
(93 %)
15 diff
(98.3 %id)
H08287 whole brain .c 86 to 538 1 to 467       467/469
(99 %)
18 diff
(96.2 %id)
BE275453 melanotic melanoma, skin .c 88 to 736 1 to 646       646/687
(94 %)
13 diff
(98.2 %id)
BE277447 melanotic melanoma, skin .c 88 to 748 1 to 660       660/673
(98 %)
3 diff
(99.6 %id)
BE388286 endometrium, adenocarcinoma cell line, uterus .c 88 to 598 1 to 511       511/511
(100 %)
0 diff
(100 %id)
BE390492 endometrium, adenocarcinoma cell line, uterus .c 88 to 616 1 to 538       538/543
(99 %)
20 diff
(96.4 %id)
BP382994 ilea mucosa .c 88 to 518 1 to 430       430/435
(98 %)
10 diff
(97.8 %id)
DA675795   .c 88 to 669 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
BC003553 Skin, melanotic melanoma. .c 89 to 2656 1 to 2568 exact tiling clone, available from MGC, AAA   2568/2568
(100 %)
0 diff
(100 %id)
DA159505 amygdala .c 89 to 538 109 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA383961 thalamus .c 89 to 544 105 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
CD705652 normal nasopharynx .c 89 to 461 128 to 500       488/500
(97 %)
9 diff
(98.2 %id)
DA496272 brain .c 89 to 547 107 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BI559567 testis .c 89 to 718 121 to 751       751/752
(99 %)
8 diff
(99.0 %id)
DN602335 human embryonic stem cells .c 89 to 730 104 to 745       745/745
(100 %)
0 diff
(100 %id)
TI_44347823   .c 89 to 718 207 to 837       749/838
(89 %)
11 diff
(98.7 %id)
DA771659 brain .c 89 to 547 109 to 568   capped   567/567
(100 %)
4 diff
(99.3 %id)
DA890563 rectum .c 89 to 534 106 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
AU141151 thyroid gland .c 89 to 732 115 to 761   capped   760/760
(100 %)
8 diff
(99.0 %id)
BM151579 leukopheresis .c 90 to 436 62 to 412       351/414
(84 %)
11 diff
(97.4 %id)
DA709259   .c 97 to 392 2 to 297   capped   296/296
(100 %)
0 diff
(100 %id)
N29133 melanocyte .c 100 to 574 1 to 475       475/475
(100 %)
0 diff
(100 %id)
CV025989 mixed .c 101 to 710 1 to 610       610/610
(100 %)
3 diff
(99.6 %id)
TI_1948147188   .c 101 to 810 133 to 849       717/1297
(55 %)
24 diff
(98.2 %id)
TI_1948147189   .c 101 to 1025 130 to 1053       924/1273
(72 %)
20 diff
(98.5 %id)
TI_1948147513   .c 101 to 862 135 to 897       763/1199
(63 %)
18 diff
(98.5 %id)
TI_1948147514   .c 101 to 1022 126 to 1043       918/1258
(72 %)
22 diff
(98.3 %id)
TI_1948147836   .c 101 to 747 135 to 783       649/1269
(51 %)
16 diff
(98.8 %id)
TI_1948147837   .c 101 to 901 125 to 937       813/1359
(59 %)
46 diff
(96.7 %id)
TI_1948148169   .c 101 to 726 136 to 762       627/1417
(44 %)
20 diff
(98.6 %id)
TI_1948148170   .c 101 to 911 128 to 946       819/1324
(61 %)
24 diff
(98.2 %id)
BQ932531 leiomyosarcoma, uterus .c 106 to 921 1 to 828       828/1081
(76 %)
26 diff
(97.6 %id)
AU132262   .c 117 to 934 2 to 817   capped   816/816
(100 %)
10 diff
(98.8 %id)
AA743852 germinal center B cell .c 121 to 539 1 to 418       418/418
(100 %)
3 diff
(99.3 %id)
F05776 brain, total brain .c 122 to 355 1 to 234       234/234
(100 %)
0 diff
(100 %id)
R25534 whole brain .c 123 to 530 1 to 415       415/441
(94 %)
16 diff
(96.4 %id)
R54323 whole brain .c 123 to 620 1 to 504       504/514
(98 %)
13 diff
(97.5 %id)
H06556 whole brain .c 123 to 483 1 to 367       367/452
(81 %)
8 diff
(98.3 %id)
FN169575 breast carcinoma .c 150 to 259 109 to 1     Submitted on the opposite strand 109/110
(99 %)
1 diff
(99.1 %id)
DA465395   .c 179 to 755 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
BQ954677 large cell carcinoma, lung .c 179 to 1102 1 to 924       924/924
(100 %)
4 diff
(99.6 %id)
CB269275 adipose .c 182 to 712 1 to 537       537/539
(99 %)
10 diff
(98.2 %id)
M78719   .c 248 to 620 1 to 374       374/379
(98 %)
2 diff
(99.5 %id)
BQ650510 hepatocellular carcinoma, cell line, Liver .c 248 to 1119 7 to 884       878/902
(97 %)
13 diff
(98.6 %id)
BU839620 hepatocellular carcinoma, cell line, Liver .c 251 to 1146 1 to 913       913/951
(96 %)
34 diff
(96.5 %id)
BQ652120 hepatocellular carcinoma, cell line, Liver .c 253 to 940 1 to 690       690/939
(73 %)
21 diff
(97.8 %id)
BQ648806 hepatocellular carcinoma, cell line, Liver .c 253 to 1166 1 to 914       914/919
(99 %)
10 diff
(99.0 %id)
BQ651979 hepatocellular carcinoma, cell line, Liver .c 253 to 1156 1 to 915       915/933
(98 %)
24 diff
(97.5 %id)
TI_154195005   .c 253 to 1202 25 to 959       935/1055
(88 %)
36 diff
(96.6 %id)
BQ938238 epidermoid carcinoma, cell line, lung .c 254 to 1210 1 to 973       973/974
(99 %)
45 diff
(95.4 %id)
CX787248 human embryonic stem cells .c 255 to 972 1 to 717       717/717
(100 %)
2 diff
(99.8 %id)
BM928806 hepatocellular carcinoma, cell line, Liver .c 256 to 1010 2 to 757       756/965
(78 %)
16 diff
(98.4 %id)
BE311568 Kidney, renal cell adenocarcinoma .c 265 to 726 1 to 462       462/462
(100 %)
1 diff
(99.8 %id)
BE747549 adenocarcinoma cell line, ovary .c 265 to 1144 12 to 891       880/962
(91 %)
25 diff
(97.5 %id)
DA379043 thalamus .c 295 to 853 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
BE747707 adenocarcinoma cell line, ovary .c 303 to 952 34 to 673       640/1010
(63 %)
35 diff
(96.6 %id)
BE742006 adenocarcinoma cell line, ovary .c 303 to 1002 1 to 697       697/698
(99 %)
8 diff
(98.9 %id)
BM706306 eye, lens .c 303 to 818 1 to 516       516/516
(100 %)
1 diff
(99.9 %id)
BI259814 cervical carcinoma cell line, cervix .c 312 to 1089 1 to 773       773/773
(100 %)
10 diff
(98.8 %id)
BE272037 adenocarcinoma cell line, ovary .c 325 to 934 1 to 612       612/612
(100 %)
4 diff
(99.4 %id)
BE742906 adenocarcinoma cell line, ovary .c 325 to 1008 1 to 677       677/677
(100 %)
8 diff
(98.9 %id)
BE744957 adenocarcinoma cell line, ovary .c 325 to 1144 1 to 812       812/958
(84 %)
28 diff
(97.1 %id)
BE741028 adenocarcinoma cell line, ovary .c 325 to 993 1 to 667       667/667
(100 %)
4 diff
(99.5 %id)
BE740133 adenocarcinoma cell line, ovary .c 336 to 1064 11 to 738       728/740
(98 %)
12 diff
(98.4 %id)
BX283270 blood, natural killer cells, cell line .c 340 to 829 1 to 490       490/490
(100 %)
0 diff
(100 %id)
BG744052 blood, natural killer cells, cell line .c 340 to 1119 1 to 778       778/778
(100 %)
8 diff
(99.0 %id)
AW401424 lymph .c 372 to 717 1 to 346       346/346
(100 %)
9 diff
(97.4 %id)
DA823815 pericardium .c 381 to 879 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
BE387023 melanotic melanoma, skin .c 403 to 1122 8 to 724       717/745
(96 %)
18 diff
(97.6 %id)
BF027512 melanotic melanoma, skin .c 407 to 1240 1 to 831       831/999
(83 %)
25 diff
(97.5 %id)
BG333594 melanotic melanoma, skin .c 408 to 1086 1 to 679       679/679
(100 %)
12 diff
(98.3 %id)
BG334859 melanotic melanoma, skin .c 408 to 1138 1 to 726       726/913
(79 %)
14 diff
(98.5 %id)
BG475191 melanotic melanoma, skin .c 408 to 1163 1 to 762       762/769
(99 %)
11 diff
(98.6 %id)
BG475972 melanotic melanoma, skin .c 408 to 1027 1 to 619       619/814
(76 %)
15 diff
(98.2 %id)
TI_154197836   .c 410 to 1255 47 to 884       838/1076
(77 %)
17 diff
(98.5 %id)
AJ708064 heart .c 414 to 853 15 to 453   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 439/455
(96 %)
14 diff
(97.0 %id)
BG286380 bladder, transitional cell papilloma, cell line .c 417 to 983 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
BM007856 Spleen .c 419 to 1206 1 to 803       803/803
(100 %)
19 diff
(97.7 %id)
TI_59383262   .c 419 to 1206 60 to 862       803/803
(100 %)
19 diff
(97.7 %id)
BM920135 pooled pancreas and spleen .c 420 to 1256 8 to 844       837/1090
(76 %)
12 diff
(98.9 %id)
BQ709625 Spleen .c 421 to 1256 1 to 840       840/924
(90 %)
10 diff
(99.0 %id)
DA494481 brain .c 422 to 670 2 to 250   capped   249/249
(100 %)
0 diff
(100 %id)
BE407838 choriocarcinoma, placenta .c 427 to 1116 1 to 683       683/774
(88 %)
15 diff
(98.1 %id)
BF026613 melanotic melanoma, skin .c 428 to 1214 1 to 785       785/808
(97 %)
22 diff
(97.3 %id)
TI_154196204   .c 445 to 1257 20 to 827       808/1072
(75 %)
31 diff
(97.2 %id)
CX754448 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 448 to 934 37 to 523     Submitted on the opposite strand 487/767
(63 %)
19 diff
(97.6 %id)
CX755975 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 450 to 1193 1 to 744     Submitted on the opposite strand 744/744
(100 %)
1 diff
(99.9 %id)
AW582440 stomach .c 465 to 959 29 to 529       501/533
(93 %)
24 diff
(95.5 %id)
BX422926 adult brain, brain .c 515 to 1553 1 to 1036       1036/1036
(100 %)
22 diff
(97.9 %id)
CR596482 adult brain .c 516 to 2621 1 to 2106       2106/2106
(100 %)
0 diff
(100 %id)
BM008693 adenocarcinoma, Pancreas .c 519 to 1225 1 to 706       706/707
(99 %)
9 diff
(98.8 %id)
TI_59386402   .c 520 to 1225 61 to 765       705/706
(99 %)
8 diff
(98.9 %id)
DA427042 colon .c 525 to 1070 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
BP344773 synovial membrane .c 526 to 1109 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA287266 corpus callosum .c 531 to 1080 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
BE615962 adenocarcinoma, Pancreas .c 541 to 1364 1 to 826       826/855
(96 %)
23 diff
(97.4 %id)
BE614833 adenocarcinoma, Pancreas .c 542 to 1336 1 to 793       795/931
(85 %)
28 diff
(97.0 %id)
BM918082 blood, natural killer cells, cell line .c 546 to 1257 23 to 734       712/1020
(69 %)
12 diff
(98.9 %id)
BQ052090 blood, natural killer cells, cell line .c 546 to 1570 7 to 1033       1027/1039
(98 %)
33 diff
(96.9 %id)
BQ052259 blood, natural killer cells, cell line .c 546 to 1542 7 to 1011       1006/1050
(95 %)
30 diff
(97.2 %id)
DA668894 esophagus .c 552 to 1058 2 to 510   capped   509/513
(99 %)
4 diff
(99.3 %id)
CD700537 normal nasopharynx .c 556 to 1077 31 to 552       522/552
(94 %)
8 diff
(98.6 %id)
BP279967   .c 558 to 1139 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA650676   .c 561 to 1105 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DN913088   .c 569 to 836 268 to 1       268/268
(100 %)
4 diff
(98.6 %id)
BE018120 cervical carcinoma cell line, cervix .c 587 to 1053 1 to 468       468/468
(100 %)
4 diff
(99.2 %id)
BP343909 synovial membrane .c 613 to 1025 1 to 413       413/581
(71 %)
13 diff
(97.8 %id)
BQ331172 lung_tumor .c 632 to 905 20 to 292       273/292
(93 %)
8 diff
(97.3 %id)
CO397401 Chondrosarcoma Lung Metastasis cell lines, lung .c 660 to 1258 43 to 629       587/737
(79 %)
24 diff
(96.8 %id)
DA345167 substantia nigra .c 680 to 1245 2 to 567   capped   566/566
(100 %)
6 diff
(99.0 %id)
BQ231155 large cell carcinoma, lung .c 696 to 1570 1 to 881       881/883
(99 %)
29 diff
(96.8 %id)
CT004202 T-Lymphocytes .c 702 to 856 1 to 155       155/155
(100 %)
5 diff
(96.8 %id)
BQ961437 leiomyosarcoma, uterus .c 709 to 1545 1 to 847       847/897
(94 %)
24 diff
(97.4 %id)
TI_1948147516   .c 744 to 1848 1245 to 129       1117/1418
(78 %)
47 diff
(96.7 %id)
BP203390 coronary artery .c 747 to 1305 1 to 558       558/558
(100 %)
10 diff
(98.3 %id)
BU163736 epidermoid carcinoma, cell line, salivary gland .c 757 to 1664 1 to 917       917/917
(100 %)
22 diff
(97.7 %id)
BQ673797 epidermoid carcinoma, cell line, salivary gland .c 757 to 1480 1 to 729       729/879
(82 %)
13 diff
(98.6 %id)
TI_57164267   .c 759 to 1489 69 to 818       750/1083
(69 %)
39 diff
(96.4 %id)
BF663270 B-cells, primary B-cells from tonsils (cell line) .c 760 to 1540 1 to 774       774/809
(95 %)
29 diff
(96.5 %id)
BF976482 B-cells, primary B-cells from tonsils (cell line) .c 760 to 1549 1 to 797       797/1002
(79 %)
24 diff
(97.7 %id)
BG753946 B-cells, primary B-cells from tonsils (cell line) .c 760 to 1540 1 to 782       782/784
(99 %)
14 diff
(98.3 %id)
BI836775 pooled pancreas and spleen .c 763 to 1531 1 to 792       792/1011
(78 %)
29 diff
(97.2 %id)
BQ637554 eye, retina .c 765 to 1278 1 to 515       515/515
(100 %)
1 diff
(99.9 %id)
BG744281 blood, natural killer cells, cell line .c 767 to 1585 1 to 823       823/823
(100 %)
14 diff
(98.3 %id)
BE742737 adenocarcinoma cell line, ovary .c 768 to 1540 1 to 751       751/927
(81 %)
34 diff
(96.4 %id)
TI_154186197   .c 812 to 1521 121 to 828       708/947
(74 %)
4 diff
(99.6 %id)
CF995581 Pooled Chondrosarcoma Tumor cells .c 871 to 1713 1 to 855       855/862
(99 %)
18 diff
(98.0 %id)
AA214692   .c 872 to 1308 1 to 439       439/439
(100 %)
13 diff
(97.1 %id)
CN396090 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 886 to 1676 1 to 791       791/791
(100 %)
2 diff
(99.8 %id)
CF138967 CNCAP(3)T-225 cell line, Prostate .c 888 to 1379 1 to 492       492/492
(100 %)
5 diff
(99.0 %id)
TI_154169132   .c 895 to 1399 80 to 584       505/505
(100 %)
1 diff
(99.9 %id)
BI086257 cervix .c 907 to 1718 1 to 816       814/1062
(76 %)
46 diff
(95.7 %id)
BU859361 ovary, teratocarcinoma, cell line .c 922 to 1793 1 to 881       881/908
(97 %)
11 diff
(98.8 %id)
BF664224 B-cells, primary B-cells from tonsils (cell line) .c 927 to 1708 1 to 774       774/774
(100 %)
20 diff
(97.5 %id)
BF974606 B-cells, primary B-cells from tonsils (cell line) .c 927 to 1659 1 to 734       734/1125
(65 %)
17 diff
(98.5 %id)
TI_1948147839   .c 950 to 1848 1030 to 129       902/1297
(69 %)
25 diff
(98.1 %id)
TI_1948147515   .c 953 to 1848 1021 to 125       897/1194
(75 %)
17 diff
(98.6 %id)
BM470149 melanotic melanoma, skin .c 956 to 1634 6 to 692       687/1095
(62 %)
22 diff
(98.0 %id)
AW609709 stomach .c 959 to 1292 1 to 335       335/360
(93 %)
18 diff
(95.0 %id)
AA211258.
matches multiple genes
  .c 959 to 1348 1 to 390     also hits gene beywee 390/390
(100 %)
3 diff
(99.3 %id)
BG999862 head_normal .c 961 to 1369 1 to 412       412/412
(100 %)
8 diff
(98.1 %id)
CX755226 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 974 to 1686 1 to 713     Submitted on the opposite strand 713/713
(100 %)
0 diff
(100 %id)
BF526633 brain, glioblastoma with EGFR amplification .c 988 to 1338 1 to 430       294/430
(68 %)
11 diff
(97.5 %id)
TI_1948148171   .c 1018 to 1848 964 to 125       840/1210
(69 %)
59 diff
(95.2 %id)
TI_1948148172   .c 1025 to 1848 958 to 131       828/1411
(58 %)
28 diff
(98.1 %id)
BI335265 cervical carcinoma cell line, cervix .c 1028 to 1852 1 to 841       841/852
(98 %)
28 diff
(96.8 %id)
TI_1948147191   .c 1032 to 1848 950 to 131       820/1388
(59 %)
13 diff
(99.1 %id)
FN055532 breast carcinoma .c 1035 to 1132 104 to 7     Submitted on the opposite strand 98/104
(94 %)
5 diff
(95.2 %id)
TI_1948147190   .c 1080 to 1848 910 to 130       781/1181
(66 %)
16 diff
(98.7 %id)
EC452296 Prostate .c 1089 to 1187 101 to 3       99/101
(98 %)
0 diff
(100 %id)
CB267510 adipose .c 1091 to 1590 1 to 503       503/503
(100 %)
8 diff
(98.5 %id)
BE746696 adenocarcinoma cell line, ovary .c 1093 to 1770 1 to 674       674/801
(84 %)
2 diff
(99.8 %id)
BE745522 adenocarcinoma cell line, ovary .c 1094 to 1938 1 to 838       836/930
(89 %)
27 diff
(97.1 %id)
BM919742 pooled pancreas and spleen .c 1096 to 2020 9 to 942       934/1001
(93 %)
29 diff
(97.2 %id)
AI349337 lung .c 1103 to 1413 310 to 1       310/310
(100 %)
2 diff
(99.4 %id)
TI_1948147838   .c 1117 to 1848 861 to 124       738/1284
(57 %)
12 diff
(99.1 %id)
DA131440 alzheimer cortex .c 1121 to 1742 2 to 623   capped   622/622
(100 %)
0 diff
(100 %id)
AL110421 testis .c 1137 to 1831 1 to 694       694/694
(100 %)
3 diff
(99.6 %id)
AW385093 head_neck .c 1145 to 1315 174 to 4       171/174
(98 %)
0 diff
(100 %id)
BF907886 uterus_tumor .c 1170 to 1418 262 to 14     Submitted on the opposite strand 249/265
(93 %)
0 diff
(100 %id)
BF908514 uterus_tumor .c 1170 to 1418 262 to 14     Submitted on the opposite strand 249/265
(93 %)
0 diff
(100 %id)
BF848872 lung_normal .c 1175 to 1563 32 to 420       389/420
(92 %)
7 diff
(98.4 %id)
BF954118 nervous_normal .c 1175 to 1563 32 to 420       389/420
(92 %)
7 diff
(98.4 %id)
DA062357 cerebellum .c 1177 to 1745 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BU526504 epidermoid carcinoma, cell line, lung .c 1192 to 1797 19 to 625       607/868
(69 %)
19 diff
(97.9 %id)
BU528374 epidermoid carcinoma, cell line, lung .c 1197 to 2039 1 to 847       847/904
(93 %)
12 diff
(98.7 %id)
BG468757 adenocarcinoma cell line, colon .c 1240 to 1825 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
BQ883224 brain, neuroblastoma, cell line .c 1247 to 2135 1 to 891       891/892
(99 %)
9 diff
(99.0 %id)
BX452542 adult brain, brain .c 1257 to 2007 1 to 749       749/756
(99 %)
18 diff
(97.7 %id)
BE867528 adenocarcinoma, colon .c 1391 to 2109 1 to 714       714/809
(88 %)
12 diff
(98.6 %id)
BQ674506 epidermoid carcinoma, cell line, salivary gland .c 1424 to 2162 1 to 745       745/916
(81 %)
7 diff
(99.3 %id)
BQ673961 epidermoid carcinoma, cell line, salivary gland .c 1426 to 2257 26 to 870       845/909
(92 %)
35 diff
(96.2 %id)
CF146109 CNCAP(3)T-225 cell line, Prostate .c 1427 to 1828 1 to 402       402/402
(100 %)
4 diff
(99.1 %id)
TI_154178455   .c 1434 to 1991 81 to 637       557/557
(100 %)
8 diff
(98.6 %id)
BI041960 nervous_tumor .c 1452 to 1562 25 to 135       111/135
(82 %)
6 diff
(95.6 %id)
BE746347 adenocarcinoma cell line, ovary .c 1473 to 2301 1 to 816       816/817
(99 %)
16 diff
(98.1 %id)
BG340316 leiomyosarcoma cell line, uterus .c 1477 to 2249 1 to 766       766/851
(90 %)
30 diff
(96.5 %id)
BE207651 adenocarcinoma cell line, ovary .c 1494 to 1741 1 to 248       248/248
(100 %)
5 diff
(98.0 %id)
BQ228533 embryonal carcinoma, cell line, testis .c 1551 to 2345 1 to 802       802/870
(92 %)
12 diff
(98.7 %id)
BX422925 adult brain, brain .c 1582 to 2621 1034 to 1       1034/1034
(100 %)
21 diff
(98.0 %id)
BQ328669 leiomios .c 1595 to 1792 209 to 7       202/213
(94 %)
6 diff
(97.2 %id)
AL535711 brain, fetal brain .c 1666 to 2579 917 to 1       917/917
(100 %)
15 diff
(98.4 %id)
BP264391 small intestine .c 1668 to 2248 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BF238110 B-cells, primary B-cells from tonsils (cell line) .c 1675 to 2397 1 to 714       714/928
(76 %)
18 diff
(98.1 %id)
AL522289 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 1696 to 2638 943 to 1       943/943
(100 %)
6 diff
(99.4 %id)
BG745009 blood, natural killer cells, cell line .c 1720 to 2595 899 to 19       881/914
(96 %)
18 diff
(98.1 %id)
BG744721 blood, natural killer cells, cell line .c 1726 to 2613 891 to 5       887/951
(93 %)
7 diff
(99.3 %id)
AL516915 brain, neuroblastoma, neuroblastoma cells .c 1793 to 2618 848 to 25   AAA   824/900
(91 %)
7 diff
(99.3 %id)
AU151424   .c 2109 to 2661 552 to 1       552/591
(93 %)
8 diff
(98.7 %id)
AU152278   .c 2110 to 2649 547 to 8       540/547
(98 %)
0 diff
(100 %id)
AU153818   .c 2122 to 2656 534 to 1       534/536
(99 %)
11 diff
(98.0 %id)
BJ990929 hepatoblastoma .c 2139 to 2618 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AU153111   .c 2165 to 2661 496 to 1       496/496
(100 %)
6 diff
(98.8 %id)
AU158796 thyroid gland .c 2165 to 2661 495 to 1       495/495
(100 %)
5 diff
(99.0 %id)
BE208253 adenocarcinoma cell line, ovary .c 2224 to 2661 450 to 13   AAA   438/438
(100 %)
1 diff
(99.8 %id)
N21170 melanocyte .c 2233 to 2666 434 to 1       434/434
(100 %)
5 diff
(98.9 %id)
R45379 whole brain .c 2284 to 2656 390 to 13   AAA   378/380
(99 %)
12 diff
(96.9 %id)
R60907 whole brain .c 2285 to 2656 388 to 12   AAA   377/459
(82 %)
13 diff
(97.2 %id)
R45593 whole brain .c 2299 to 2656 380 to 18   AAA   363/379
(95 %)
12 diff
(96.9 %id)
H08189 whole brain .c 2311 to 2656 365 to 13   AAA   353/353
(100 %)
12 diff
(96.7 %id)
H06500 whole brain .c 2314 to 2656 364 to 18   AAA   347/389
(89 %)
9 diff
(97.7 %id)
Z40553 brain, total brain .c 2375 to 2656 281 to 1       281/281
(100 %)
1 diff
(99.7 %id)
BE301604 cervical carcinoma cell line, cervix .c 2380 to 2656 301 to 25   AAA   277/277
(100 %)
6 diff
(97.9 %id)
R54324 whole brain .c 2386 to 2656 287 to 18   AAA   270/270
(100 %)
2 diff
(99.3 %id)
BU734689 eye, lens .c 2422 to 2661 258 to 19   AAA   240/240
(100 %)
0 diff
(100 %id)
AL135113 melanoma (MeWo cell line) .d 1 to 581 1 to 581   tiling clone,   581/588
(98 %)
1 diff
(99.9 %id)
AW407553 lymph .d 136 to 452 8 to 324       317/324
(97 %)
6 diff
(98.2 %id)
AW407557 lymph .d 136 to 453 8 to 325       318/325
(97 %)
6 diff
(98.2 %id)
TI_154145952   .d 136 to 709 81 to 657   tiling clone,   577/797
(72 %)
28 diff
(96.5 %id)
AL135114 melanoma (MeWo cell line) .d 1875 to 2815 948 to 8   tiling clone,   941/948
(99 %)
3 diff
(99.7 %id)
AK295474 hippocampus .e 1 to 1043 1 to 1043   tiling clone,   1043/1043
(100 %)
0 diff
(100 %id)
DC330199 hippocampus .e 1 to 528 1 to 528       528/528
(100 %)
0 diff
(100 %id)
BE071863 breast .e 984 to 1542 580 to 22   tiling clone, Submitted on the opposite strand 559/582
(96 %)
9 diff
(98.5 %id)
AK309916 placenta .f 1 to 1003 1 to 1003 exact tiling clone,   1003/1003
(100 %)
0 diff
(100 %id)
DA660564   .g 1 to 531 2 to 535 C126L G127W A128C R129P T130G ... tiling clone, capped   534/534
(100 %)
4 diff
(99.3 %id)
DB018849 esophageal, tumor tissue .h 1 to 559 2 to 560 G4S tiling clone, capped   559/559
(100 %)
2 diff
(99.7 %id)
FN051480 breast carcinoma .i 1 to 91 91 to 1   tiling clone, Submitted on the opposite strand 91/91
(100 %)
0 diff
(100 %id)
BI064313 uterus_tumor .i 62 to 528 1 to 467 exact tiling clone,   467/467
(100 %)
0 diff
(100 %id)
BF903595 marrow .j 1 to 251 264 to 14 V12A H22P A31V T34V N35T ... tiling clone, Submitted on the opposite strand 253/264
(95 %)
9 diff
(96.6 %id)
DC358066   .k 1 to 544 1 to 544 exact tiling clone,   544/544
(100 %)
1 diff
(99.9 %id)
BI063303 uterus_tumor .l 1 to 390 1 to 393   tiling clone,   393/393
(100 %)
2 diff
(99.5 %id)
BI063764 uterus_tumor .l 1 to 390 1 to 393       393/393
(100 %)
2 diff
(99.5 %id)
CB987385 Pooled-Glandular .l 94 to 734 1 to 655   tiling clone,   655/767
(85 %)
25 diff
(96.8 %id)
BG743667 skin .l 421 to 1068 1 to 646 L14W G15V L16*     646/646
(100 %)
7 diff
(99.0 %id)
BX423397 brain, fetal brain .l 488 to 1387 905 to 1 G13X G15X L59S G60W A61C ...     905/905
(100 %)
14 diff
(98.5 %id)
BG924637 cartilage .l 503 to 1007 97 to 601 exact     505/533
(94 %)
6 diff
(98.9 %id)
TI_154135280   .l 508 to 1426 995 to 87 L4X L14W G15X L16* AAA   909/997
(91 %)
20 diff
(98.0 %id)
CN396088 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .l 540 to 1077 1 to 538 exact tiling clone,   538/538
(100 %)
0 diff
(100 %id)
TI_154133021   .l 557 to 1422 966 to 98 A2F I3G L4H C5F L6V ... AAA   869/890
(97 %)
56 diff
(93.8 %id)
EB388728 eye, optic nerve .l 571 to 1311 1 to 741 exact     741/741
(100 %)
0 diff
(100 %id)
BM738050 Ascites, stomach .l 584 to 778 1 to 195       195/195
(100 %)
4 diff
(98.0 %id)
BF974261 B-cells, primary B-cells from tonsils (cell line) .l 592 to 1315 1 to 719 exact     719/944
(76 %)
11 diff
(98.9 %id)
FN158544 breast carcinoma .l 595 to 688 94 to 1     Submitted on the opposite strand 94/94
(100 %)
0 diff
(100 %id)
TI_149297807   .l 597 to 1427 898 to 80 exact AAA   819/978
(83 %)
17 diff
(98.3 %id)
AA442158   .l 600 to 1054 16 to 468 P47A fully sequenced,   453/468
(96 %)
6 diff
(98.8 %id)
TI_149307544   .l 617 to 1427 893 to 84 L9M G13V L14W G15V L16* AAA   810/985
(82 %)
10 diff
(99.0 %id)
TI_154025869   .l 628 to 1427 888 to 91 A2H I3X L4V C5S L7E ... AAA   798/798
(100 %)
12 diff
(98.5 %id)
CX872832 embryonic stem .l 694 to 1428 757 to 22 exact   Submitted on the opposite strand 736/757
(97 %)
0 diff
(100 %id)
BM982814 lung, Primary Lung Cystic Fibrosis EpithelialCells .l 710 to 1427 736 to 19 exact AAA   718/718
(100 %)
2 diff
(99.8 %id)
BG775007 carcinoma, cell line, Prostate .l 711 to 1374 1 to 662 L49S P50L F51L D52T L53Y ...     662/758
(87 %)
3 diff
(99.7 %id)
BM049250 carcinoma, cell line, Prostate .l 711 to 1055 1 to 342 L4C C5V L6F L7E R8V ...     342/362
(94 %)
10 diff
(97.3 %id)
AW207451   .l 713 to 1100 12 to 399 exact   Submitted on the opposite strand 388/399
(97 %)
5 diff
(98.8 %id)
BQ918841 carcinoma, cell line, Prostate .l 713 to 1409 1 to 705 exact     705/977
(72 %)
21 diff
(97.9 %id)
CA314188 Human Lung Epithelial cells, lung .l 714 to 1427 732 to 19 L4X L7X L16X AAA   714/718
(99 %)
0 diff
(100 %id)
BE673737 carcinoid, lung .l 735 to 1062 1 to 328 S29T   Submitted on the opposite strand 328/328
(100 %)
2 diff
(99.4 %id)
CU443476 epidermis .l 736 to 1432 708 to 12 exact   Submitted on the opposite strand 697/714
(97 %)
6 diff
(99.2 %id)
AI694735 carcinoid, lung .l 737 to 1221 1 to 485 W75X   Submitted on the opposite strand 485/485
(100 %)
2 diff
(99.6 %id)
BE219534 carcinoid, lung .l 737 to 966 1 to 230     Submitted on the opposite strand 230/230
(100 %)
3 diff
(98.7 %id)
CA308987 Alveolar Macrophage, lung .l 737 to 1427 709 to 19 L6P E26X L46V L53X AAA   691/691
(100 %)
2 diff
(99.8 %id)
BM695965 eye, human retina .l 743 to 888 8 to 153   fully sequenced,   146/153
(95 %)
8 diff
(94.8 %id)
BQ638987 eye, retina .l 745 to 1224 1 to 480       480/480
(100 %)
2 diff
(99.6 %id)
CA307340 Alveolar Macrophage, lung .l 747 to 1432 704 to 19   tiling clone, AAA   686/686
(100 %)
0 diff
(100 %id)
CA748821 Alveolar Macrophage, lung .l 747 to 1427 699 to 19   AAA   681/681
(100 %)
0 diff
(100 %id)
TI_154033651   .l 750 to 1427 703 to 28   AAA   676/812
(83 %)
8 diff
(99.1 %id)
BM702578 eye, human retina .l 753 to 1246 1 to 494       494/494
(100 %)
5 diff
(99.0 %id)
BM701617 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .l 753 to 1304 1 to 552       552/552
(100 %)
3 diff
(99.5 %id)
CA440110 lung, Metastatic Chondrosarcoma .l 770 to 1427 676 to 19   AAA   658/658
(100 %)
4 diff
(99.4 %id)
BU599187 mixed (pool of 40 RNAs) .l 771 to 1422 1 to 655       655/809
(80 %)
13 diff
(98.4 %id)
BM979308 lung, Primary Lung Epithelial Cells .l 795 to 1427 651 to 19   AAA   633/633
(100 %)
1 diff
(99.9 %id)
BQ021578 lung, Metastatic Chondrosarcoma .l 800 to 1427 646 to 19   AAA   628/628
(100 %)
0 diff
(100 %id)
BQ000904 lung, Metastatic Chondrosarcoma .l 800 to 1422 641 to 19   AAA   623/623
(100 %)
0 diff
(100 %id)
BQ876737 sympathetic trunk .l 813 to 1428 1 to 616       616/617
(99 %)
2 diff
(99.7 %id)
BM687797 eye, Retina Foveal and Macular .l 813 to 1399 1 to 587       587/587
(100 %)
5 diff
(99.2 %id)
AA278253 germinal center B cell .l 814 to 1288 1 to 474   fully sequenced,   474/474
(100 %)
1 diff
(99.8 %id)
AI700496 carcinoid, lung .l 844 to 1426 583 to 1       583/583
(100 %)
1 diff
(99.9 %id)
FN176226 breast carcinoma .l 857 to 961 100 to 1     Submitted on the opposite strand 100/102
(98 %)
7 diff
(93.2 %id)
BU729209 eye, human retina .l 858 to 1427 588 to 19   fully sequenced, AAA   570/570
(100 %)
0 diff
(100 %id)
CU456078 epidermis .l 881 to 1349 475 to 7     Submitted on the opposite strand 469/487
(96 %)
0 diff
(100 %id)
AW575500 lymph .l 881 to 1422 559 to 18   AAA   542/542
(100 %)
0 diff
(100 %id)
AI751573 Bone, Hip .l 882 to 1397 523 to 8       516/523
(98 %)
0 diff
(100 %id)
BQ019805 Chondrosarcoma, Left Pubic Bone .l 897 to 1427 549 to 19   AAA   531/531
(100 %)
0 diff
(100 %id)
AW467163 2 pooled tumors (clear cell type), Kidney .l 900 to 1420 521 to 1       521/521
(100 %)
0 diff
(100 %id)
AW518057 lymph node, lymphoma, follicular mixed small and largecell .l 919 to 1427 509 to 1       509/509
(100 %)
1 diff
(99.9 %id)
CU457338 epidermis .l 922 to 1173 256 to 4     Submitted on the opposite strand 253/267
(94 %)
0 diff
(100 %id)
AA362805 ovary .l 929 to 1258 1 to 330       330/330
(100 %)
3 diff
(99.1 %id)
BG476212 melanotic melanoma, skin .l 931 to 1432 1 to 502   AAA   502/502
(100 %)
4 diff
(99.3 %id)
CD623118   .l 933 to 1158 1 to 226       226/229
(98 %)
5 diff
(97.9 %id)
CD623119   .l 933 to 1145 216 to 4       213/216
(98 %)
0 diff
(100 %id)
BM905987 ovary (pool of 3) .l 939 to 1428 14 to 503       490/580
(84 %)
1 diff
(99.9 %id)
DB524254 testis .l 942 to 1427 1 to 486     Submitted on the opposite strand 486/486
(100 %)
1 diff
(99.8 %id)
AI636521 pooled germ cell tumors .l 949 to 1427 496 to 18   AAA   479/479
(100 %)
1 diff
(99.8 %id)
BF592766 pooled germ cell tumors .l 949 to 1423 482 to 8       475/482
(98 %)
0 diff
(100 %id)
BF025783 melanotic melanoma, skin .l 951 to 1427 1 to 476       476/476
(100 %)
1 diff
(99.8 %id)
BE276511 melanotic melanoma, skin .l 952 to 1427 1 to 477       477/477
(100 %)
6 diff
(98.8 %id)
AI337104 pooled germ cell tumors .l 956 to 1427 490 to 18   AAA   473/473
(100 %)
7 diff
(98.6 %id)
AW150249 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .l 959 to 1427 483 to 14   AAA   470/470
(100 %)
3 diff
(99.4 %id)
AI924861 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .l 961 to 1428 468 to 1       468/468
(100 %)
0 diff
(100 %id)
AI141744 pooled germ cell tumors .l 963 to 1423 469 to 9       461/469
(98 %)
0 diff
(100 %id)
AA768345 germinal center B cell .l 968 to 1422 472 to 19   AAA   454/454
(100 %)
1 diff
(99.8 %id)
BI490056 pooled brain, lung, testis .l 974 to 1427 1 to 454       454/917
(49 %)
3 diff
(99.7 %id)
TI_43960962   .l 974 to 1427 63 to 516       454/979
(46 %)
3 diff
(99.7 %id)
AW243061 Kidney .l 976 to 1432 457 to 1       457/457
(100 %)
0 diff
(100 %id)
BF591430 colon, colon tumor, RER+ .l 984 to 1423 441 to 2       440/441
(99 %)
0 diff
(100 %id)
AI659602 Prostate .l 985 to 1432 448 to 1       448/448
(100 %)
3 diff
(99.4 %id)
AA658020   .l 988 to 1339 1 to 350       350/350
(100 %)
5 diff
(98.6 %id)
AW197602 pooled germ cell tumors .l 992 to 1427 450 to 15   AAA   436/436
(100 %)
7 diff
(98.4 %id)
AA834161 Kidney, kidney tumor .l 994 to 1427 430 to 1       430/430
(100 %)
8 diff
(98.2 %id)
AA535414 invasive prostate tumor, Prostate .l 1000 to 1428 445 to 21       425/445
(95 %)
0 diff
(100 %id)
AI652248 pooled germ cell tumors .l 1000 to 1427 445 to 18   AAA   428/428
(100 %)
2 diff
(99.6 %id)
AA814910 germinal center B cell .l 1001 to 1422 439 to 19   AAA   421/421
(100 %)
2 diff
(99.6 %id)
BU959499 mixed (pool of 40 RNAs) .l 1011 to 1425 1 to 415       415/417
(99 %)
1 diff
(99.8 %id)
AA442159   .l 1024 to 1428 412 to 9   fully sequenced,   404/412
(98 %)
0 diff
(100 %id)
AA648253 germinal center B cell .l 1029 to 1422 411 to 19   AAA   393/393
(100 %)
1 diff
(99.8 %id)
AI637612 pooled germ cell tumors .l 1032 to 1427 411 to 16   AAA   396/396
(100 %)
0 diff
(100 %id)
AI916999 pooled germ cell tumors .l 1035 to 1428 398 to 5       394/400
(98 %)
0 diff
(100 %id)
AI824975 pooled germ cell tumors .l 1035 to 1423 393 to 5       389/393
(98 %)
0 diff
(100 %id)
AI206223 pooled germ cell tumors .l 1039 to 1428 390 to 1       390/393
(99 %)
4 diff
(99.0 %id)
AW197256 pooled germ cell tumors .l 1044 to 1427 398 to 15   AAA   384/384
(100 %)
6 diff
(98.5 %id)
AI565539 anaplastic oligodendroglioma, brain .l 1058 to 1422 375 to 11   AAA   365/365
(100 %)
2 diff
(99.5 %id)
AI199960 lung .l 1060 to 1428 372 to 4       369/372
(99 %)
0 diff
(100 %id)
AI266138 lung .l 1060 to 1426 367 to 1       367/367
(100 %)
0 diff
(100 %id)
AI913680 Kidney .l 1064 to 1427 384 to 4       381/384
(99 %)
0 diff
(100 %id)
AA083361   .l 1066 to 1423 364 to 8       357/364
(98 %)
0 diff
(100 %id)
AI337020 pooled germ cell tumors .l 1078 to 1428 352 to 1       352/352
(100 %)
8 diff
(97.8 %id)
FN059531 breast carcinoma .l 1079 to 1178 103 to 4     Submitted on the opposite strand 100/104
(96 %)
0 diff
(100 %id)
CB046745 2 pooled tumors (clear cell type), Kidney .l 1079 to 1422 13 to 356   AAA   344/356
(96 %)
6 diff
(98.4 %id)
BF059652 pooled germ cell tumors .l 1092 to 1427 336 to 1       336/336
(100 %)
0 diff
(100 %id)
AA922457 pooled germ cell tumors .l 1096 to 1427 344 to 15   AAA   330/330
(100 %)
4 diff
(98.8 %id)
AI863786 colon, colon tumor, RER+ .l 1105 to 1427 323 to 1       323/323
(100 %)
7 diff
(97.9 %id)
BF063933 colon, colon tumor, RER+ .l 1111 to 1427 332 to 15       318/332
(95 %)
0 diff
(100 %id)
AA664066 lung .l 1117 to 1427 336 to 27   AAA   310/310
(100 %)
4 diff
(98.8 %id)
AI369734 anaplastic oligodendroglioma, brain .l 1125 to 1422 331 to 34   AAA   298/298
(100 %)
25 diff
(91.7 %id)
AW137784   .l 1126 to 1427 320 to 18   AAA   303/315
(96 %)
10 diff
(96.9 %id)
BM855746 stomach .l 1141 to 1266 1 to 126       126/126
(100 %)
0 diff
(100 %id)
BE501101 pooled germ cell tumors .l 1164 to 1427 264 to 1       264/264
(100 %)
0 diff
(100 %id)
AI961198 pooled germ cell tumors .l 1167 to 1427 261 to 1       261/261
(100 %)
0 diff
(100 %id)
AA994345 pooled .l 1169 to 1428 261 to 4       258/261
(98 %)
0 diff
(100 %id)
AI205196 brain, meningioma .l 1170 to 1410 241 to 1       241/241
(100 %)
3 diff
(98.8 %id)
EC466651 Prostate .l 1190 to 1293 1 to 103       103/103
(100 %)
1 diff
(99.1 %id)
AA847882 germinal center B cell .l 1194 to 1422 245 to 19   AAA   227/227
(100 %)
4 diff
(98.3 %id)
D19762   .l 1232 to 1428 1 to 196     Submitted on the opposite strand 196/198
(98 %)
2 diff
(99.0 %id)
AA278672 germinal center B cell .l 1258 to 1429 171 to 1   fully sequenced,   171/171
(100 %)
10 diff
(94.2 %id)
FN060093 breast carcinoma .l 1280 to 1328 49 to 1     Submitted on the opposite strand 49/50
(98 %)
0 diff
(100 %id)
BE246866 leukopheresis .l 1286 to 1425 143 to 3       141/143
(98 %)
0 diff
(100 %id)
AI203087 pooled germ cell tumors .l 1291 to 1427 154 to 18   AAA   137/137
(100 %)
1 diff
(99.3 %id)
AA576571 colon, colon tumor RER+ .l 1304 to 1427 124 to 1       124/124
(100 %)
0 diff
(100 %id)
BQ880437 ductal carcinoma, cell line, Pancreas .m 1 to 862 1 to 871 exact tiling clone,   868/874
(99 %)
9 diff
(99.0 %id)
BQ691670 ductal carcinoma, cell line, Pancreas .m 1 to 812 1 to 817 exact tiling clone,   817/891
(91 %)
11 diff
(98.8 %id)
BQ685813 ductal carcinoma, cell line, Pancreas .m 1 to 871 1 to 872 exact tiling clone,   872/872
(100 %)
8 diff
(99.1 %id)
BX952370   .m 3 to 538 1 to 536 exact     536/536
(100 %)
1 diff
(99.9 %id)
BX952371   .m 3 to 537 1 to 535 exact     535/535
(100 %)
1 diff
(99.9 %id)
BX956536   .m 6 to 664 1 to 659 exact     659/659
(100 %)
1 diff
(99.9 %id)
BQ687235 ductal carcinoma, cell line, Pancreas .m 65 to 776 66 to 789 E3*     724/925
(78 %)
39 diff
(95.8 %id)
C17728 placenta .m 805 to 1094 318 to 35   tiling clone, Submitted on the opposite strand 284/318
(89 %)
0 diff
(100 %id)
C18332 placenta .m 826 to 1139 311 to 1   tiling clone, Submitted on the opposite strand 311/311
(100 %)
11 diff
(96.5 %id)
W28000 eye, retina .n-u 1 to 438 1 to 443   tiling clone,   443/516
(85 %)
10 diff
(98.1 %id)
CV347927 placenta_normal .n-u 202 to 522 4 to 327 L5R I14M I22F W31G C33G ... tiling clone,   324/328
(98 %)
20 diff
(94.0 %id)
DC374461 brain .o 1 to 328 1 to 328 exact tiling clone,   328/335
(97 %)
4 diff
(98.9 %id)
BI038501 nervous_tumor .p-u 1 to 143 143 to 1 E13K tiling clone,   143/143
(100 %)
1 diff
(99.4 %id)
BP192757 brain Gene TRAFD1, variant not shown         This clone was ignored    
AI350900 pooled germ cell tumors Gene TRAFD1, variant not shown         This clone was ignored    
AI498266 anaplastic oligodendroglioma, brain Gene TRAFD1, variant not shown         Suspected internal deletion, this clone was ignored    
AW002527 pooled germ cell tumors Gene TRAFD1, variant not shown         This clone was ignored    
AW629031 pooled Gene TRAFD1, variant not shown         Suspected internal deletion, this clone was ignored    
AW452353   Gene TRAFD1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BF223703 pooled germ cell tumors Gene TRAFD1, variant not shown       AAA This clone was ignored    
EB386700 eye, optic nerve Gene TRAFD1, variant not shown         Suspected internal deletion, this clone was ignored    
DB053134 testis Gene TRAFD1, variant not shown       capped Suspected internal deletion, this clone was ignored    
TI_159723813   Gene TRAFD1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB853185 Human Lung Epithelial cells, lung Gene TRAFD1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI