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Gene TMEM139andCASP2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
595 supporting clones for gene TMEM139andCASP2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA505883 brain .a 1 to 561 2 to 563   tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
DB455837 testis .a 35 to 515 1 to 481       481/481
(100 %)
2 diff
(99.6 %id)
DB455840 testis .a 35 to 534 1 to 500       500/500
(100 %)
0 diff
(100 %id)
CB988674 Human Placenta, placenta .a 94 to 811 28 to 751       724/798
(90 %)
21 diff
(97.4 %id)
NM_032982.2   .a 94 to 4219 1 to 4126 exact RefSeq, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 4126/4126
(100 %)
0 diff
(100 %id)
DA337134 hippocampus .a 139 to 729 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DA577984   .a 139 to 699 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA708346   .a 139 to 713 2 to 581   capped   580/580
(100 %)
6 diff
(99.0 %id)
DA720785   .a 139 to 699 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DA732179   .a 139 to 859 2 to 721   capped   720/792
(90 %)
12 diff
(98.5 %id)
DA781490 brain .a 139 to 666 2 to 529   capped   528/528
(100 %)
3 diff
(99.5 %id)
DA811195 brain .a 139 to 710 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA853631 placenta .a 139 to 702 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB132825 thymus .a 139 to 684 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB290488 uterus .a 139 to 659 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DA093766 cerebellum .a 142 to 659 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
CR591430 B cells (Ramos cell line) Cot 25-normalized .a 146 to 1937 1 to 1792 exact     1792/1792
(100 %)
0 diff
(100 %id)
DA434449 tongue, tumor tissue .a 152 to 665 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
DA460952 tongue, tumor tissue .a 154 to 721 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA096704 cerebellum .a 155 to 721 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB068695 testis .a 165 to 705 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB094310 testis .a 165 to 722 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB154164 thymus .a 166 to 576 2 to 413   capped   412/412
(100 %)
1 diff
(99.8 %id)
DB136039 thymus .a 168 to 708 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
BG397039 melanotic melanoma, skin .a 169 to 933 1 to 771       771/771
(100 %)
16 diff
(98.0 %id)
AW503239 lymph .a 176 to 565 8 to 398       391/398
(98 %)
3 diff
(99.3 %id)
DA781451 brain .a 176 to 745 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
TI_154159062   .a 176 to 670 83 to 578       496/503
(98 %)
14 diff
(97.3 %id)
DB159442 thymus .a 186 to 759 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BJ991919 hepatoblastoma .a 193 to 694 1 to 502       502/502
(100 %)
0 diff
(100 %id)
DN999270   .a 198 to 747 1 to 549       549/549
(100 %)
5 diff
(99.1 %id)
BX485787   .a 200 to 741 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
BM802814 embryonal carcinoma, cell line, testis .a 204 to 988 1 to 789       789/1176
(67 %)
13 diff
(98.9 %id)
DA458999 tongue, tumor tissue .a 207 to 735 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
AK291274   .a 208 to 1981 1 to 1774 exact tiling clone,   1774/1774
(100 %)
0 diff
(100 %id)
BX462247 B cells (Ramos cell line) .a 208 to 1196 1 to 979       979/982
(99 %)
16 diff
(98.4 %id)
DA758341   .a 209 to 755 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DN995719 breast cancer, Mammary gland (cancer tissue) .a 223 to 839 1 to 615       615/615
(100 %)
4 diff
(99.4 %id)
DA997574   .a 226 to 802 2 to 578   capped   577/577
(100 %)
5 diff
(99.2 %id)
BG478050 melanotic melanoma, skin .a 227 to 917 1 to 697       697/698
(99 %)
12 diff
(98.3 %id)
DA800989 brain .a 227 to 633 2 to 408   capped   407/407
(100 %)
1 diff
(99.8 %id)
BC002427 Skin, melanotic melanoma. .a 228 to 3097 1 to 2869 V172L tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 2869/2869
(100 %)
4 diff
(99.9 %id)
DA793370 brain .a 229 to 735 2 to 508   capped   507/507
(100 %)
1 diff
(99.9 %id)
DA798138 brain .a 229 to 719 2 to 492   capped   491/491
(100 %)
1 diff
(99.8 %id)
DA483962 brain .a 230 to 745 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
DA863401 placenta .a 230 to 876 2 to 648   capped   647/648
(99 %)
1 diff
(99.9 %id)
TI_1948094362   .a 230 to 996 119 to 888       770/1423
(54 %)
28 diff
(98.1 %id)
TI_1948094661   .a 230 to 988 120 to 887       768/1472
(52 %)
33 diff
(97.8 %id)
DB159764 thymus .a 230 to 812 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DB160136 thymus .a 230 to 783 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB226490 trachea .a 230 to 792 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA495737 brain .a 231 to 764 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA792059 brain .a 231 to 730 2 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
DA795840 brain .a 234 to 771 8 to 545   capped   538/538
(100 %)
0 diff
(100 %id)
DB288147 uterus .a 234 to 772 10 to 549   capped   540/540
(100 %)
2 diff
(99.7 %id)
DR005157 Prostate .a 238 to 955 1 to 718       718/718
(100 %)
4 diff
(99.5 %id)
BU431399 lymph .a 240 to 751 1 to 512       512/512
(100 %)
4 diff
(99.3 %id)
CV025503 mixed .a 241 to 753 1 to 513       513/514
(99 %)
2 diff
(99.7 %id)
TI_1948094220   .a 241 to 981 130 to 873       744/1396
(53 %)
31 diff
(97.8 %id)
CT004380 T-Lymphocytes .a 244 to 1078 1 to 835       835/835
(100 %)
0 diff
(100 %id)
TI_154153292   .a 246 to 850 79 to 683       605/612
(98 %)
11 diff
(98.3 %id)
BE275289 melanotic melanoma, skin .a 247 to 994 1 to 749       749/974
(76 %)
11 diff
(98.9 %id)
BE275077 melanotic melanoma, skin .a 247 to 983 1 to 739       739/876
(84 %)
14 diff
(98.5 %id)
TI_1065986824   .a 262 to 988 756 to 31       726/923
(78 %)
10 diff
(99.0 %id)
TI_1210517900   .a 269 to 1009 769 to 3       767/876
(87 %)
37 diff
(95.8 %id)
TI_1210518690   .a 269 to 1009 745 to 4       742/834
(88 %)
7 diff
(99.2 %id)
TI_1210517904   .a 274 to 1009 737 to 4       734/814
(90 %)
9 diff
(98.9 %id)
DN831556 pooled .a 275 to 988 726 to 14     Submitted on the opposite strand 713/726
(98 %)
0 diff
(100 %id)
DN831558 pooled .a 275 to 988 715 to 2     Submitted on the opposite strand 714/715
(99 %)
0 diff
(100 %id)
DR008124 pooled .a 276 to 988 726 to 14     Submitted on the opposite strand 713/726
(98 %)
5 diff
(99.4 %id)
EG327540 pooled .a 276 to 1002 727 to 1     Submitted on the opposite strand 727/727
(100 %)
0 diff
(100 %id)
TI_1210517906   .a 276 to 1009 739 to 6       734/836
(87 %)
4 diff
(99.6 %id)
EG328552 pooled .a 277 to 998 722 to 1     Submitted on the opposite strand 722/722
(100 %)
0 diff
(100 %id)
TI_1210518454   .a 277 to 1012 731 to 3       729/753
(96 %)
7 diff
(99.1 %id)
DN831554 pooled .a 278 to 1001 725 to 1     Submitted on the opposite strand 725/725
(100 %)
1 diff
(99.9 %id)
DN831878 pooled .a 278 to 1001 724 to 1     Submitted on the opposite strand 724/724
(100 %)
2 diff
(99.8 %id)
DN930563 pooled .a 278 to 1003 726 to 1     Submitted on the opposite strand 726/726
(100 %)
2 diff
(99.8 %id)
EG327302 pooled .a 278 to 1001 724 to 1     Submitted on the opposite strand 724/724
(100 %)
1 diff
(99.9 %id)
EG327964 pooled .a 278 to 1001 724 to 1     Submitted on the opposite strand 724/724
(100 %)
1 diff
(99.9 %id)
DY655582 pooled .a 279 to 1001 723 to 1       723/723
(100 %)
0 diff
(100 %id)
U13021 brain .a 279 to 1734 1 to 1456       1456/1456
(100 %)
1 diff
(100.0 %id)
TI_837040684   .a 280 to 1044 1 to 767   fully sequenced,   767/767
(100 %)
11 diff
(98.6 %id)
TI_1210518452   .a 280 to 993 735 to 18       721/762
(94 %)
11 diff
(98.6 %id)
TI_824943054   .a 281 to 633 1 to 352       352/760
(46 %)
11 diff
(98.6 %id)
TI_1065986823   .a 281 to 988 1 to 707   fully sequenced,   707/707
(100 %)
13 diff
(98.2 %id)
TI_824942968   .a 282 to 1044 1 to 763   fully sequenced,   763/763
(100 %)
10 diff
(98.7 %id)
TI_824943015   .a 282 to 1044 1 to 764       764/768
(99 %)
6 diff
(99.3 %id)
TI_1065986496   .a 282 to 1042 1 to 760   fully sequenced,   760/760
(100 %)
13 diff
(98.3 %id)
TI_1065986817   .a 282 to 1041 1 to 759       759/770
(98 %)
14 diff
(98.2 %id)
TI_837040682   .a 283 to 1044 6 to 766   fully sequenced,   761/766
(99 %)
7 diff
(99.1 %id)
TI_824942966   .a 284 to 1032 1 to 748   fully sequenced,   748/748
(100 %)
5 diff
(99.4 %id)
TI_813709366   .a 285 to 746 1 to 461   fully sequenced,   461/461
(100 %)
2 diff
(99.6 %id)
TI_813709368   .a 286 to 1030 1 to 745       745/915
(81 %)
7 diff
(99.3 %id)
TI_1210518448   .a 286 to 1009 727 to 5       723/827
(87 %)
2 diff
(99.8 %id)
TI_1210518456   .a 286 to 1023 1 to 741       741/824
(89 %)
18 diff
(97.9 %id)
TI_1210518450   .a 286 to 1026 1 to 738       738/790
(93 %)
11 diff
(98.7 %id)
DY655584 pooled .a 287 to 1002 716 to 1       716/716
(100 %)
0 diff
(100 %id)
TI_1210517908   .a 287 to 1021 1 to 733   AAA   733/755
(97 %)
6 diff
(99.3 %id)
DY655588 pooled .a 288 to 1001 714 to 1       714/714
(100 %)
5 diff
(99.3 %id)
EG328436 pooled .a 288 to 1001 714 to 1     Submitted on the opposite strand 714/714
(100 %)
2 diff
(99.8 %id)
TI_824942969   .a 288 to 1009 733 to 10       724/776
(93 %)
11 diff
(98.6 %id)
TI_824942973   .a 289 to 1042 7 to 758   fully sequenced,   752/758
(99 %)
7 diff
(99.1 %id)
TI_1065986820   .a 289 to 1032 5 to 744   fully sequenced,   740/744
(99 %)
11 diff
(98.6 %id)
TI_1065986815   .a 289 to 1032 5 to 746   fully sequenced,   744/748
(99 %)
7 diff
(99.1 %id)
TI_1210517910   .a 289 to 987 1 to 712       712/763
(93 %)
22 diff
(97.2 %id)
DY655036 pooled .a 290 to 1001 712 to 1       712/714
(99 %)
0 diff
(100 %id)
DY655580 pooled .a 290 to 1001 712 to 1       712/714
(99 %)
0 diff
(100 %id)
DW009640 pooled .a 291 to 1002 712 to 1       712/712
(100 %)
0 diff
(100 %id)
DW009646 pooled .a 291 to 1001 711 to 1       711/711
(100 %)
2 diff
(99.8 %id)
DW009965 pooled .a 291 to 1001 711 to 1       711/711
(100 %)
0 diff
(100 %id)
DY655034 pooled .a 291 to 1001 711 to 1       711/711
(100 %)
5 diff
(99.3 %id)
EG327538 pooled .a 291 to 988 709 to 12     Submitted on the opposite strand 698/709
(98 %)
0 diff
(100 %id)
EG327962 pooled .a 291 to 1000 710 to 1     Submitted on the opposite strand 710/710
(100 %)
0 diff
(100 %id)
EG328720 pooled .a 291 to 988 708 to 12     Submitted on the opposite strand 697/708
(98 %)
3 diff
(99.6 %id)
TI_813709364   .a 291 to 1044 8 to 760   fully sequenced,   753/760
(99 %)
16 diff
(97.9 %id)
BT007240   .a 292 to 1597 1 to 1306       1306/1308
(99 %)
3 diff
(99.8 %id)
DW009734 pooled .a 292 to 1001 710 to 1       710/710
(100 %)
0 diff
(100 %id)
DY655784 pooled .a 293 to 1001 709 to 1       709/709
(100 %)
0 diff
(100 %id)
DW009961 pooled .a 294 to 1001 708 to 1       708/708
(100 %)
1 diff
(99.9 %id)
TI_824943016   .a 294 to 606 16 to 328       313/328
(95 %)
12 diff
(96.4 %id)
DY654418 pooled .a 296 to 1001 706 to 1       706/706
(100 %)
0 diff
(100 %id)
DW009963 pooled .a 298 to 988 702 to 12       691/702
(98 %)
2 diff
(99.8 %id)
EG327775 pooled .a 298 to 1002 705 to 1     Submitted on the opposite strand 705/705
(100 %)
0 diff
(100 %id)
TI_837040678   .a 298 to 1029 13 to 743   fully sequenced,   731/743
(98 %)
13 diff
(98.3 %id)
DY655586 pooled .a 301 to 1001 701 to 1       701/701
(100 %)
0 diff
(100 %id)
DN930557 pooled .a 302 to 1001 700 to 1     Submitted on the opposite strand 700/700
(100 %)
0 diff
(100 %id)
TI_1210518276   .a 306 to 987 16 to 700       685/731
(93 %)
3 diff
(99.6 %id)
DN930451 pooled .a 309 to 1009 701 to 1     Submitted on the opposite strand 701/701
(100 %)
2 diff
(99.8 %id)
DN831561 pooled .a 312 to 999 1 to 688       688/688
(100 %)
2 diff
(99.8 %id)
EG328020 pooled .a 312 to 817 1 to 506       506/506
(100 %)
0 diff
(100 %id)
DR008121 pooled .a 313 to 977 1 to 665       665/665
(100 %)
3 diff
(99.6 %id)
DW009644 pooled .a 313 to 1003 691 to 1       691/698
(98 %)
4 diff
(99.5 %id)
EG328434 pooled .a 313 to 988 686 to 12     Submitted on the opposite strand 675/697
(96 %)
1 diff
(99.9 %id)
EG328441 pooled .a 313 to 988 687 to 12     Submitted on the opposite strand 676/689
(98 %)
4 diff
(99.5 %id)
TI_813709067   .a 313 to 746 32 to 466   fully sequenced, AAA   435/466
(93 %)
7 diff
(98.5 %id)
TI_813709064   .a 313 to 746 33 to 466   fully sequenced,   434/466
(93 %)
8 diff
(98.3 %id)
TI_837040676   .a 313 to 988 30 to 705   fully sequenced,   676/705
(95 %)
7 diff
(99.1 %id)
TI_1065986501   .a 313 to 1041 30 to 758   fully sequenced,   729/758
(96 %)
12 diff
(98.5 %id)
TI_1065986502   .a 313 to 1032 29 to 747       719/764
(94 %)
17 diff
(97.8 %id)
TI_1065986504   .a 313 to 746 28 to 462   fully sequenced,   435/462
(94 %)
1 diff
(99.8 %id)
TI_1065986499   .a 313 to 1038 30 to 755   fully sequenced,   726/755
(96 %)
16 diff
(97.9 %id)
TI_1065986825   .a 313 to 1042 28 to 756   fully sequenced,   729/756
(96 %)
13 diff
(98.3 %id)
TI_1065986819   .a 313 to 1032 27 to 746   fully sequenced,   720/746
(96 %)
8 diff
(99.0 %id)
TI_1210518148   .a 313 to 983 22 to 692       671/931
(72 %)
15 diff
(98.4 %id)
TI_1210518128   .a 313 to 984 24 to 693       672/905
(74 %)
64 diff
(93.0 %id)
TI_1210518240   .a 313 to 988 24 to 702       679/930
(73 %)
16 diff
(98.3 %id)
TI_1210518196   .a 313 to 986 22 to 697       676/734
(92 %)
19 diff
(97.5 %id)
TI_1210518390   .a 313 to 1019 29 to 734       706/740
(95 %)
18 diff
(97.6 %id)
DN930559 pooled .a 315 to 1003 690 to 1     Submitted on the opposite strand 690/690
(100 %)
7 diff
(99.0 %id)
DY655040 pooled .a 315 to 1001 687 to 1       687/687
(100 %)
1 diff
(99.9 %id)
EG327816 pooled .a 316 to 971 1 to 656       656/656
(100 %)
3 diff
(99.6 %id)
EG327969 pooled .a 316 to 977 1 to 661       661/661
(100 %)
7 diff
(99.0 %id)
TI_824943012   .a 316 to 664 44 to 395   fully sequenced,   352/395
(89 %)
6 diff
(98.5 %id)
DN831553 pooled .a 317 to 1022 1 to 706       706/706
(100 %)
3 diff
(99.6 %id)
DN831557 pooled .a 317 to 1026 1 to 710       710/710
(100 %)
1 diff
(99.9 %id)
DN831559 pooled .a 317 to 1028 1 to 712       712/712
(100 %)
2 diff
(99.8 %id)
DN831563 pooled .a 317 to 1007 1 to 691       691/691
(100 %)
2 diff
(99.8 %id)
DN831883 pooled .a 317 to 1007 1 to 691       691/691
(100 %)
0 diff
(100 %id)
DN930562 pooled .a 317 to 984 1 to 668       668/668
(100 %)
0 diff
(100 %id)
DW009639 pooled .a 317 to 1007 1 to 691       691/691
(100 %)
0 diff
(100 %id)
DW009733 pooled .a 317 to 1032 1 to 716       716/716
(100 %)
1 diff
(99.9 %id)
DY655037 pooled .a 317 to 1017 1 to 701       701/701
(100 %)
0 diff
(100 %id)
DY655039 pooled .a 317 to 975 1 to 659       659/659
(100 %)
0 diff
(100 %id)
DY655583 pooled .a 317 to 1026 1 to 710       710/710
(100 %)
1 diff
(99.9 %id)
DN930560 pooled .a 318 to 945 1 to 628       628/628
(100 %)
5 diff
(99.3 %id)
DY655579 pooled .a 318 to 977 1 to 660       660/660
(100 %)
4 diff
(99.4 %id)
DY655585 pooled .a 318 to 987 1 to 671       671/671
(100 %)
0 diff
(100 %id)
DY655587 pooled .a 318 to 1006 1 to 689       689/689
(100 %)
1 diff
(99.9 %id)
EG327998 pooled .a 318 to 982 1 to 667       667/667
(100 %)
4 diff
(99.5 %id)
EG328442 pooled .a 318 to 997 1 to 680       680/680
(100 %)
0 diff
(100 %id)
DN930448 pooled .a 319 to 1005 1 to 687       687/687
(100 %)
6 diff
(99.2 %id)
DN930558 pooled .a 319 to 987 1 to 670       670/670
(100 %)
2 diff
(99.8 %id)
DN930596 pooled .a 319 to 1018 1 to 700       700/700
(100 %)
2 diff
(99.8 %id)
DR008117 pooled .a 319 to 1005 1 to 687       687/687
(100 %)
1 diff
(99.9 %id)
DW009643 pooled .a 319 to 1008 1 to 690       690/690
(100 %)
2 diff
(99.8 %id)
DW009645 pooled .a 319 to 1010 1 to 692       692/692
(100 %)
0 diff
(100 %id)
DW009960 pooled .a 319 to 1031 1 to 713       713/713
(100 %)
1 diff
(99.9 %id)
DW009964 pooled .a 319 to 968 1 to 650       650/650
(100 %)
0 diff
(100 %id)
DW009968 pooled .a 319 to 987 1 to 670       670/670
(100 %)
2 diff
(99.8 %id)
DY655031 pooled .a 319 to 987 1 to 671       671/671
(100 %)
1 diff
(99.9 %id)
DY655581 pooled .a 319 to 1021 1 to 702       702/704
(99 %)
3 diff
(99.6 %id)
EG327539 pooled .a 319 to 976 1 to 658       658/658
(100 %)
0 diff
(100 %id)
EG327728 pooled .a 319 to 969 1 to 652       652/652
(100 %)
4 diff
(99.4 %id)
EG327774 pooled .a 319 to 1007 1 to 689       689/693
(99 %)
3 diff
(99.6 %id)
EG327961 pooled .a 319 to 987 1 to 671       671/671
(100 %)
1 diff
(99.9 %id)
EG328440 pooled .a 319 to 997 1 to 679       679/679
(100 %)
0 diff
(100 %id)
EG328444 pooled .a 319 to 986 1 to 668       668/668
(100 %)
0 diff
(100 %id)
EG328654 pooled .a 319 to 987 1 to 670       670/670
(100 %)
1 diff
(99.9 %id)
DW009641 pooled .a 320 to 1010 1 to 691       691/691
(100 %)
0 diff
(100 %id)
DY655358 pooled .a 320 to 982 1 to 664       664/664
(100 %)
4 diff
(99.4 %id)
EG327434 pooled .a 320 to 1020 1 to 701       701/701
(100 %)
1 diff
(99.9 %id)
EG327465 pooled .a 320 to 815 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
EG327963 pooled .a 320 to 1018 1 to 698       698/698
(100 %)
2 diff
(99.8 %id)
EG328022 pooled .a 320 to 811 1 to 492       492/494
(99 %)
3 diff
(99.4 %id)
EG328435 pooled .a 320 to 987 1 to 669       669/669
(100 %)
0 diff
(100 %id)
DR008119 pooled .a 321 to 997 1 to 677       677/677
(100 %)
0 diff
(100 %id)
DW009606 pooled .a 321 to 987 1 to 668       668/668
(100 %)
3 diff
(99.6 %id)
DW009962 pooled .a 321 to 1028 1 to 708       708/708
(100 %)
0 diff
(100 %id)
DY655035 pooled .a 321 to 1018 1 to 698       698/698
(100 %)
0 diff
(100 %id)
DY655277 pooled .a 321 to 988 1 to 668       668/675
(98 %)
2 diff
(99.8 %id)
DY655783 pooled .a 321 to 987 1 to 668       668/668
(100 %)
0 diff
(100 %id)
EG328437 pooled .a 321 to 816 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
DN930556 pooled .a 322 to 987 1 to 667       667/667
(100 %)
0 diff
(100 %id)
DR008123 pooled .a 322 to 1032 1 to 711       711/711
(100 %)
6 diff
(99.2 %id)
DY655227 pooled .a 322 to 816 1 to 495       495/495
(100 %)
4 diff
(99.2 %id)
EG327380 pooled .a 322 to 812 1 to 491       491/491
(100 %)
4 diff
(99.2 %id)
EG327947 pooled .a 322 to 976 1 to 655       655/655
(100 %)
1 diff
(99.9 %id)
EG327992 pooled .a 322 to 972 1 to 652       652/652
(100 %)
4 diff
(99.4 %id)
EG328030 pooled .a 322 to 813 1 to 492       492/492
(100 %)
0 diff
(100 %id)
DN831879 pooled .a 323 to 1000 1 to 678       678/678
(100 %)
0 diff
(100 %id)
DN831881 pooled .a 323 to 900 1 to 578       578/578
(100 %)
4 diff
(99.4 %id)
DY655033 pooled .a 323 to 986 1 to 664       664/664
(100 %)
0 diff
(100 %id)
EG327537 pooled .a 323 to 1024 1 to 702       702/703
(99 %)
1 diff
(99.9 %id)
EG327935 pooled .a 326 to 872 1 to 548       548/548
(100 %)
3 diff
(99.5 %id)
EG327301 pooled .a 327 to 981 1 to 655       655/655
(100 %)
0 diff
(100 %id)
EG327729 pooled .a 344 to 991 648 to 1     Submitted on the opposite strand 648/648
(100 %)
0 diff
(100 %id)
DN831562 pooled .a 345 to 1003 659 to 1     Submitted on the opposite strand 659/661
(99 %)
2 diff
(99.7 %id)
EG327825 pooled .a 345 to 988 645 to 2     Submitted on the opposite strand 644/645
(99 %)
0 diff
(100 %id)
EG327817 pooled .a 349 to 992 644 to 1     Submitted on the opposite strand 644/644
(100 %)
1 diff
(99.9 %id)
EG327644 pooled .a 353 to 958 1 to 606       606/606
(100 %)
1 diff
(99.9 %id)
DN930524 pooled .a 357 to 691 1 to 334       334/334
(100 %)
3 diff
(99.2 %id)
EG327948 pooled .a 360 to 965 606 to 1     Submitted on the opposite strand 606/610
(99 %)
0 diff
(100 %id)
EG328722 pooled .a 360 to 989 630 to 1     Submitted on the opposite strand 630/630
(100 %)
1 diff
(99.9 %id)
DR008122 pooled .a 363 to 1001 639 to 1     Submitted on the opposite strand 639/639
(100 %)
2 diff
(99.7 %id)
EG327771 pooled .a 365 to 966 602 to 1     Submitted on the opposite strand 602/602
(100 %)
4 diff
(99.4 %id)
EG328052 pooled .a 368 to 813 1 to 446       446/446
(100 %)
0 diff
(100 %id)
TI_154159980   .a 392 to 1051 90 to 744       655/658
(99 %)
12 diff
(98.2 %id)
DN831880 pooled .a 398 to 1002 605 to 1     Submitted on the opposite strand 605/605
(100 %)
5 diff
(99.2 %id)
EG327881 pooled .a 400 to 803 1 to 404       404/404
(100 %)
3 diff
(99.3 %id)
BX282023 embryonal carcinoma, cell line, testis .a 401 to 895 1 to 495       495/495
(100 %)
0 diff
(100 %id)
DN831127 pooled .a 402 to 1006 605 to 1     Submitted on the opposite strand 605/605
(100 %)
3 diff
(99.6 %id)
BQ223413 embryonal carcinoma, cell line, testis .a 403 to 1246 1 to 845       845/845
(100 %)
3 diff
(99.7 %id)
DY655038 pooled .a 409 to 1001 593 to 1       593/593
(100 %)
0 diff
(100 %id)
EG327753 pooled .a 445 to 960 518 to 1     Submitted on the opposite strand 518/518
(100 %)
4 diff
(99.3 %id)
EG327769 pooled .a 446 to 965 520 to 1     Submitted on the opposite strand 520/520
(100 %)
2 diff
(99.7 %id)
TI_1210517272   .a 465 to 973 173 to 686       514/729
(70 %)
27 diff
(96.3 %id)
EG328087 pooled .a 487 to 987 500 to 1     Submitted on the opposite strand 500/500
(100 %)
1 diff
(99.8 %id)
EG328685 pooled .a 487 to 658 172 to 1     Submitted on the opposite strand 172/172
(100 %)
0 diff
(100 %id)
TI_837040680   .a 492 to 988 525 to 32       494/692
(71 %)
11 diff
(98.5 %id)
DW009967 pooled .a 519 to 992 474 to 1       474/474
(100 %)
1 diff
(99.8 %id)
DR007927 pooled .a 521 to 983 465 to 1     Submitted on the opposite strand 465/465
(100 %)
3 diff
(99.4 %id)
DR008120 pooled .a 530 to 908 376 to 1     Submitted on the opposite strand 376/376
(100 %)
3 diff
(99.3 %id)
DA320631 hippocampus .a 547 to 1073 2 to 530   capped   529/532
(99 %)
3 diff
(99.5 %id)
EG327435 pooled .a 557 to 986 430 to 1     Submitted on the opposite strand 430/430
(100 %)
1 diff
(99.8 %id)
AA078635 placenta .a 578 to 823 245 to 1       245/245
(100 %)
2 diff
(99.2 %id)
EG327381 pooled .a 586 to 932 347 to 1     Submitted on the opposite strand 347/347
(100 %)
0 diff
(100 %id)
TI_824943011   .a 603 to 987 419 to 32   fully sequenced,   388/419
(92 %)
0 diff
(100 %id)
EG328652 pooled .a 623 to 813 1 to 191       191/191
(100 %)
0 diff
(100 %id)
TI_824943053   .a 626 to 1009 393 to 10       384/751
(51 %)
6 diff
(99.3 %id)
BM458909 melanotic melanoma, skin .a 640 to 1274 1 to 635       635/1067
(59 %)
11 diff
(99.0 %id)
TI_154153756   .a 652 to 1141 80 to 569       490/492
(99 %)
9 diff
(98.2 %id)
EG327621 pooled .a 657 to 759 1 to 103       103/103
(100 %)
3 diff
(97.1 %id)
EG327754 pooled .a 666 to 985 1 to 320       320/320
(100 %)
1 diff
(99.7 %id)
TI_813709066   .a 685 to 1011 334 to 8   fully sequenced,   327/334
(97 %)
0 diff
(100 %id)
TI_813709065   .a 685 to 1013 333 to 5   fully sequenced,   329/333
(98 %)
0 diff
(100 %id)
TI_813709367   .a 685 to 1009 333 to 9   fully sequenced,   325/333
(97 %)
0 diff
(100 %id)
TI_813709365   .a 685 to 988 333 to 30   fully sequenced,   304/333
(91 %)
0 diff
(100 %id)
TI_824942974   .a 685 to 988 334 to 31   fully sequenced,   304/334
(91 %)
0 diff
(100 %id)
TI_824942965   .a 685 to 988 334 to 31   fully sequenced,   304/334
(91 %)
0 diff
(100 %id)
TI_824942967   .a 685 to 1011 333 to 7   fully sequenced,   327/333
(98 %)
0 diff
(100 %id)
TI_837040679   .a 685 to 988 334 to 31   fully sequenced,   304/334
(91 %)
0 diff
(100 %id)
TI_837040683   .a 685 to 988 333 to 30   fully sequenced,   304/333
(91 %)
0 diff
(100 %id)
TI_837040681   .a 685 to 1009 334 to 10   fully sequenced,   325/334
(97 %)
0 diff
(100 %id)
TI_1065986500   .a 685 to 988 333 to 30   fully sequenced,   304/333
(91 %)
0 diff
(100 %id)
TI_1065986503   .a 685 to 1009 332 to 8   fully sequenced,   325/332
(97 %)
0 diff
(100 %id)
TI_1065986497   .a 685 to 1009 334 to 10   fully sequenced,   325/334
(97 %)
0 diff
(100 %id)
TI_1065986498   .a 685 to 988 332 to 29   fully sequenced,   304/332
(91 %)
0 diff
(100 %id)
TI_1065986822   .a 685 to 1001 333 to 17   fully sequenced,   317/333
(95 %)
0 diff
(100 %id)
TI_1065986826   .a 685 to 1011 333 to 7   fully sequenced,   327/333
(98 %)
3 diff
(99.1 %id)
TI_1065986818   .a 685 to 988 333 to 30   fully sequenced,   304/333
(91 %)
0 diff
(100 %id)
TI_1065986821   .a 685 to 988 334 to 31   fully sequenced,   304/334
(91 %)
0 diff
(100 %id)
TI_1065986816   .a 685 to 988 333 to 30   fully sequenced,   304/333
(91 %)
0 diff
(100 %id)
EG327625 pooled .a 738 to 994 1 to 257       257/257
(100 %)
2 diff
(99.3 %id)
TI_824943056   .a 740 to 1017 280 to 2       279/281
(99 %)
12 diff
(95.8 %id)
TI_837040677   .a 780 to 1002 239 to 18   fully sequenced,   222/239
(92 %)
0 diff
(100 %id)
BJ991920 hepatoblastoma .a 3666 to 4190 525 to 1   tiling clone,   525/525
(100 %)
0 diff
(100 %id)
AK303391 thymus .b 1 to 1381 1 to 1381 exact tiling clone,   1381/1381
(100 %)
2 diff
(99.9 %id)
DC408620 thymus .b 1 to 549 1 to 549       549/549
(100 %)
2 diff
(99.7 %id)
DA618222   .b 237 to 829 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
U13022 brain .c 1 to 2166 1 to 2167 exact tiling clone,   2167/2167
(100 %)
3 diff
(99.9 %id)
CR541748   .c 89 to 1027 1 to 939 exact     939/939
(100 %)
0 diff
(100 %id)
DA818734   .c 535 to 1091 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
NM_032983.2   .d 1 to 3908 1 to 3908 exact RefSeq, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 3908/3908
(100 %)
0 diff
(100 %id)
AW500166 lymph .d 21 to 128 8 to 115   tiling clone,   108/115
(93 %)
5 diff
(95.7 %id)
DB114298 thymus .d 82 to 616 2 to 536   tiling clone, capped   535/535
(100 %)
0 diff
(100 %id)
CN369138 embryonic stem cells, cell lines H1, H7, andH9 .d 142 to 761 1 to 620       620/620
(100 %)
1 diff
(99.9 %id)
AA297905   .d 157 to 331 1 to 176       176/176
(100 %)
2 diff
(98.9 %id)
AF314174   .d 199 to 1288 1 to 1090 S113C C149R D170N     1090/1090
(100 %)
3 diff
(99.8 %id)
DY654379 pooled .d 220 to 452 237 to 5       233/237
(98 %)
3 diff
(98.8 %id)
AF314175   .d 241 to 1288 1 to 1048 S113C C149R D170N     1048/1048
(100 %)
3 diff
(99.8 %id)
EG327651 pooled .d 289 to 452 164 to 1     Submitted on the opposite strand 164/164
(100 %)
7 diff
(95.8 %id)
AW505293 lymph .d 486 to 844 1 to 359       359/359
(100 %)
6 diff
(98.4 %id)
BF946468 nervous_normal .d 489 to 843 384 to 30       355/384
(92 %)
1 diff
(99.8 %id)
TI_154162028   .d 493 to 972 78 to 561       484/738
(65 %)
24 diff
(96.8 %id)
AA297929   .d 519 to 805 1 to 287       287/287
(100 %)
2 diff
(99.4 %id)
BQ938085 leiomyosarcoma, uterus .d 603 to 1468 1 to 876   tiling clone,   876/876
(100 %)
12 diff
(98.7 %id)
BM905918 leiomyosarcoma, uterus .d 675 to 1683 31 to 1043       1013/1071
(94 %)
38 diff
(96.5 %id)
DA864226 placenta .d 687 to 1279 2 to 594   capped   593/596
(99 %)
2 diff
(99.7 %id)
BX497191 Liver .d 688 to 888 1 to 201       201/201
(100 %)
4 diff
(98.1 %id)
DB159266 thymus .d 702 to 1283 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
EL593740 epidermis, skin .d 709 to 1223 546 to 32     Submitted on the opposite strand 515/552
(93 %)
1 diff
(99.9 %id)
BG392096 embryonal carcinoma, cell line, testis .d 775 to 1497 1 to 715       715/875
(81 %)
12 diff
(98.7 %id)
EL593729 epidermis, skin .d 803 to 1229 454 to 25     Submitted on the opposite strand 430/462
(93 %)
7 diff
(98.5 %id)
BE177327 head_neck .d 897 to 1553 667 to 1     Submitted on the opposite strand 667/667
(100 %)
13 diff
(98.1 %id)
BG829847 epithelioid carcinoma cell line, Pancreas .d 944 to 1853 1 to 914       914/930
(98 %)
42 diff
(95.5 %id)
AA298416 small intestine .d 973 to 1223 1 to 251       251/251
(100 %)
0 diff
(100 %id)
AW951422   .d 974 to 1523 1 to 550       550/551
(99 %)
1 diff
(99.9 %id)
BE742807 adenocarcinoma cell line, ovary .d 1044 to 1802 1 to 755       755/820
(92 %)
13 diff
(98.5 %id)
DA087536 cerebellum .d 1115 to 1681 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
BG005064 placenta_normal .d 1117 to 1311 1 to 200       200/200
(100 %)
14 diff
(93.0 %id)
BE693886 breast .d 1121 to 1517 396 to 2       395/396
(99 %)
2 diff
(99.5 %id)
BF884268 lung_tumor .d 1217 to 1357 1 to 141       141/141
(100 %)
6 diff
(95.8 %id)
DB507833 testis .d 1247 to 1682 1 to 439     Submitted on the opposite strand 439/439
(100 %)
22 diff
(95.0 %id)
DB521272 testis .d 1250 to 1680 1 to 432     Submitted on the opposite strand 432/432
(100 %)
2 diff
(99.6 %id)
W26481 eye, retina .d 1287 to 1700 14 to 427       414/494
(83 %)
4 diff
(99.2 %id)
AW881105 ovary .d 1342 to 1824 1 to 482       482/482
(100 %)
2 diff
(99.6 %id)
AI902725 breast .d 1359 to 1668 11 to 321       311/326
(95 %)
12 diff
(96.4 %id)
DA490510 brain .d 1360 to 1909 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
CN369137 embryonic stem cells, DMSO-treated H9 cellline .d 1396 to 1734 1 to 339       339/339
(100 %)
0 diff
(100 %id)
BU506918 leiomyosarcoma, uterus .d 1397 to 2280 37 to 920       884/923
(95 %)
6 diff
(99.4 %id)
DA870087 Prostate .d 1469 to 1992 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
AW605862 head_neck .d 1513 to 2023 40 to 553       514/553
(92 %)
6 diff
(99.0 %id)
DA478616   .d 1530 to 2074 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
EC548710 Prostate .d 1541 to 1647 1 to 108       108/108
(100 %)
1 diff
(99.1 %id)
BE080447 breast .d 1635 to 2160 533 to 8     Submitted on the opposite strand 526/533
(98 %)
0 diff
(100 %id)
DA208168 brain .d 1643 to 2189 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
EC477170 Prostate .d 1659 to 1764 1 to 106       106/106
(100 %)
4 diff
(96.3 %id)
BE206218 carcinoma cell line, cervix .d 1660 to 2235 1 to 576     Submitted on the opposite strand 576/576
(100 %)
1 diff
(99.9 %id)
AU131719   .d 1672 to 2474 2 to 806   tiling clone, capped   805/805
(100 %)
16 diff
(98.1 %id)
BE930660 placenta_normal .d 1679 to 2134 456 to 1       456/456
(100 %)
7 diff
(98.5 %id)
DA827229 pericardium .d 1699 to 2256 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA296252 hippocampus .d 1705 to 2255 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BE886571 leiomyosarcoma, uterus .d 1716 to 2478 1 to 761       761/869
(87 %)
23 diff
(97.4 %id)
AA285285   .d 1795 to 2243 1 to 448       448/448
(100 %)
10 diff
(97.8 %id)
AW882898 ovary .d 1900 to 2251 351 to 3       349/359
(97 %)
0 diff
(100 %id)
BE696560 colon .d 1920 to 2253 336 to 3       334/337
(99 %)
0 diff
(100 %id)
BE696645 colon .d 1920 to 2253 349 to 4       346/350
(98 %)
0 diff
(100 %id)
CV317565 lung_normal .d 1955 to 2134 23 to 210       188/215
(87 %)
13 diff
(94.0 %id)
AA094136   .d 1968 to 2070 1 to 102       102/107
(95 %)
6 diff
(94.4 %id)
ES310607 scalp interfollicular dermis, skin .d 2014 to 2684 1 to 674       674/674
(100 %)
13 diff
(98.1 %id)
BI090457 cervix .d 2014 to 2500 28 to 518       491/763
(64 %)
16 diff
(98.0 %id)
BF089363 head_neck .d 2039 to 2413 375 to 1       375/375
(100 %)
2 diff
(99.5 %id)
BF089368 head_neck .d 2039 to 2437 403 to 5       399/403
(99 %)
0 diff
(100 %id)
BF089366 head_neck .d 2041 to 2426 16 to 400       385/400
(96 %)
6 diff
(98.5 %id)
BF089397 head_neck .d 2066 to 2426 32 to 392       361/392
(92 %)
6 diff
(98.5 %id)
TI_154132437   .d 2126 to 2786 731 to 59   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 673/886
(75 %)
0 diff
(100 %id)
BG388059 embryonal carcinoma, cell line, testis .d 2163 to 2641 1 to 482       482/977
(49 %)
20 diff
(98.0 %id)
BM998653 lung, Metastatic Chondrosarcoma .d 2190 to 2804 616 to 1   tiling clone,   616/616
(100 %)
1 diff
(99.9 %id)
BE939197 testis_normal .d 2215 to 2350 140 to 5       136/244
(55 %)
0 diff
(100 %id)
BQ212282 embryonal carcinoma, cell line, testis .d 2219 to 2786 1 to 573       573/1001
(57 %)
28 diff
(97.3 %id)
AK096245   .d 2233 to 3908 1 to 1678   tiling clone, available from FLJ,   1678/1678
(100 %)
2 diff
(99.9 %id)
DA692506   .d 2234 to 2730 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
DB323176   .d 3323 to 3908 587 to 1       587/587
(100 %)
4 diff
(99.4 %id)
AU153405   .d 3340 to 3905 562 to 1       562/578
(97 %)
23 diff
(96.1 %id)
TI_57148984   .e 1 to 846 27 to 868 S169Q G170A N171M A172H R173G ... tiling clone,   842/871
(96 %)
16 diff
(98.2 %id)
AY358781   .f 1 to 1226 1 to 1226 exact tiling clone,   1226/1226
(100 %)
0 diff
(100 %id)
TI_1948239790   .f 102 to 332 122 to 352       231/251
(92 %)
6 diff
(97.7 %id)
EL733667 mixed .f 109 to 727 1 to 619       619/619
(100 %)
0 diff
(100 %id)
BF037395 adenocarcinoma, ovary .f 134 to 875 1 to 726       726/932
(77 %)
26 diff
(97.3 %id)
BX327889 Placenta Cot 25-normalized .f 223 to 1206 1 to 988       988/990
(99 %)
50 diff
(95.0 %id)
TI_1948239791   .f 242 to 768 646 to 120       527/544
(96 %)
0 diff
(100 %id)
TI_1948239792   .f 253 to 768 634 to 119       516/533
(96 %)
0 diff
(100 %id)
AW137196   .f 339 to 788 467 to 18   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 450/450
(100 %)
1 diff
(99.8 %id)
BG823132 adenocarcinoma cell line, colon .f 351 to 1107 8 to 767       760/768
(98 %)
10 diff
(98.7 %id)
AA188555   .f 355 to 789 1 to 437       437/437
(100 %)
4 diff
(99.1 %id)
BF036500 adenocarcinoma, ovary .f 358 to 1022 1 to 662       662/662
(100 %)
3 diff
(99.6 %id)
R50659 breast .f 388 to 733 1 to 353       353/405
(87 %)
12 diff
(97.1 %id)
W79252 heart .f 488 to 869 1 to 385   fully sequenced,   385/385
(100 %)
4 diff
(99.0 %id)
BQ359094 head_neck .f 506 to 730 1 to 229       229/274
(83 %)
12 diff
(95.7 %id)
BM995528 lung, Metastatic Chondrosarcoma .f 550 to 1224 693 to 19   AAA   675/679
(99 %)
0 diff
(100 %id)
BM719883 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 613 to 890 1 to 278   fully sequenced,   278/278
(100 %)
0 diff
(100 %id)
BC016719 Bone marrow, acute myelogenous leukemia .f 646 to 1223 1 to 578   available from MGC, AAA   578/578
(100 %)
2 diff
(99.7 %id)
BF213568 bone marrow, from acute myelogenous leukemia .f 649 to 1178 1 to 524   available from MGC,   524/524
(100 %)
8 diff
(98.5 %id)
H94354 placenta .f 718 to 755 382 to 421       391/422
(92 %)
22 diff
(94.8 %id)
AI333660 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 743 to 1224 482 to 1       482/482
(100 %)
2 diff
(99.6 %id)
R50559 breast .f 796 to 1224 434 to 1       434/438
(99 %)
11 diff
(97.5 %id)
W73920 heart .f 839 to 1225 387 to 1   fully sequenced,   387/387
(100 %)
6 diff
(98.5 %id)
AA188653   .f 839 to 1224 389 to 1       389/486
(80 %)
8 diff
(98.4 %id)
BM676746 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 860 to 1224 383 to 19   fully sequenced, AAA   365/365
(100 %)
0 diff
(100 %id)
AK315170 small intestine .g 1 to 790 1 to 790 exact tiling clone,   790/790
(100 %)
0 diff
(100 %id)
DT217166 brain .g 1 to 577 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DA269125 caudate nucleus .g 2 to 488 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
DA629511 Kidney .g 2 to 576 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA839227 placenta .g 2 to 541 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA918531 small intestine .g 2 to 567 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BG205518   .g 22 to 313 1 to 292       292/292
(100 %)
1 diff
(99.7 %id)
DA132019 alzheimer cortex .h 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
AK075067 placenta .h 3 to 1909 1 to 1907 Y209C tiling clone, available from FLJ,   1907/1907
(100 %)
1 diff
(100.0 %id)
DA828344 placenta .h 4 to 654 2 to 656   capped   655/660
(99 %)
6 diff
(99.1 %id)
DA841166 placenta .h 5 to 545 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
CD671839 eye, Iris .h 21 to 654 1 to 634   fully sequenced,   634/634
(100 %)
1 diff
(99.9 %id)
CD671838 eye, Iris .h 644 to 1164 545 to 25   tiling clone, fully sequenced, AAA   521/521
(100 %)
3 diff
(99.5 %id)
AW299324 Kidney .h 720 to 1156 448 to 12   AAA   437/437
(100 %)
1 diff
(99.8 %id)
AI246725 adenocarcinoma, colon .h 724 to 1158 438 to 4       435/438
(99 %)
0 diff
(100 %id)
BG823129 adenocarcinoma cell line, colon .h 724 to 1520 1 to 798       798/798
(100 %)
7 diff
(99.2 %id)
AI832147 colon, colon tumor, RER+ .h 728 to 1156 429 to 1       429/429
(100 %)
0 diff
(100 %id)
AA872608 Kidney .h 729 to 1155 427 to 1       427/427
(100 %)
0 diff
(100 %id)
H75518 liver and spleen .h 754 to 1185 1 to 440       440/440
(100 %)
9 diff
(98.0 %id)
BP323156 Pancreas .h 793 to 1375 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AI942412 Kidney .h 815 to 1156 342 to 1       342/350
(97 %)
2 diff
(99.5 %id)
AW058583 Kidney .h 831 to 1157 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AA937903 adenocarcinoma, colon .h 839 to 1158 322 to 4       319/322
(99 %)
0 diff
(100 %id)
AA933612 adenocarcinoma, colon .h 847 to 1138 291 to 1       291/291
(100 %)
1 diff
(99.7 %id)
DW422597 Liver .h 889 to 1162 8 to 281       274/294
(93 %)
6 diff
(98.0 %id)
AI090925 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h 969 to 1152 184 to 1       184/184
(100 %)
1 diff
(99.5 %id)
AI220717 placenta .h 988 to 1165 182 to 5       178/182
(97 %)
0 diff
(100 %id)
AA693795 liver and spleen .h 1046 to 1164 119 to 1       119/119
(100 %)
2 diff
(98.4 %id)
CA439205 lung, Lung Focal Fibrosis .h 1282 to 1909 648 to 19   AAA   630/630
(100 %)
2 diff
(99.7 %id)
CB241413 Human Lung Epithelial cells, lung .h 1285 to 1911 644 to 17   tiling clone, AAA   628/628
(100 %)
1 diff
(99.9 %id)
AL573882 placenta, Placenta Cot 25-normalized .h 1317 to 1901 585 to 1       585/585
(100 %)
8 diff
(98.7 %id)
DB372839 placenta .h 1405 to 1909 502 to 1       502/503
(99 %)
14 diff
(97.3 %id)
BM818467 Ascites, stomach .h 1409 to 1908 1 to 500   AAA   500/500
(100 %)
0 diff
(100 %id)
AI627262 Kidney .h 1425 to 1910 486 to 1       486/486
(100 %)
2 diff
(99.6 %id)
AI985510 Kidney .h 1430 to 1909 477 to 1       477/477
(100 %)
3 diff
(99.4 %id)
CA433424 mixed .h 1433 to 1909 495 to 19   AAA   477/477
(100 %)
2 diff
(99.6 %id)
AI916613 Kidney .h 1465 to 1909 445 to 1       445/445
(100 %)
1 diff
(99.8 %id)
AW242399 Kidney .h 1469 to 1909 441 to 1       441/441
(100 %)
8 diff
(98.2 %id)
AW006517 colon .h 1474 to 1911 439 to 2       438/439
(99 %)
0 diff
(100 %id)
AW614080 Kidney .h 1476 to 1910 443 to 9       435/443
(98 %)
0 diff
(100 %id)
AI346094 adenocarcinoma, colon .h 1493 to 1911 419 to 1       419/419
(100 %)
0 diff
(100 %id)
R66773 placenta .h 1530 to 1895 1 to 382       382/424
(90 %)
24 diff
(94.4 %id)
BF739805 Kidney .h 1540 to 1910 371 to 1       371/371
(100 %)
0 diff
(100 %id)
AA995892 2 pooled tumors (clear cell type), Kidney .h 1607 to 1910 307 to 5       303/307
(98 %)
0 diff
(100 %id)
AI984393 Kidney .h 1644 to 1909 266 to 1       266/266
(100 %)
0 diff
(100 %id)
AI796340 2 pooled tumors (clear cell type), Kidney .h 1648 to 1910 271 to 9       263/271
(97 %)
0 diff
(100 %id)
AA777283 liver and spleen .h 1660 to 1909 249 to 1       249/249
(100 %)
2 diff
(99.2 %id)
AA932255 2 pooled tumors (clear cell type), Kidney .h 1661 to 1910 254 to 5       250/254
(98 %)
0 diff
(100 %id)
AW138330   .h 1671 to 1909 256 to 18   AAA   239/239
(100 %)
0 diff
(100 %id)
AW236093 Kidney .h 1705 to 1910 208 to 3       206/208
(99 %)
0 diff
(100 %id)
DA628164 Kidney .i 1 to 542 2 to 543   tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
DA839855 placenta .i 2 to 561 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BC035517 Lung, Spleen, fetal, pooled .i 20 to 2381 1 to 2362 exact tiling clone, available from MGC, AAA   2362/2362
(100 %)
0 diff
(100 %id)
BI772441 pooled lung and spleen .i 20 to 625 1 to 606       606/606
(100 %)
0 diff
(100 %id)
NM_153345.1   .i 20 to 2381 1 to 2362 exact RefSeq, AAA   2362/2362
(100 %)
0 diff
(100 %id)
TI_57201463   .i 32 to 654 71 to 718       648/985
(65 %)
23 diff
(97.7 %id)
DA633762 Kidney .i 35 to 496 2 to 463   capped   462/464
(99 %)
1 diff
(99.8 %id)
AA368362 placenta .i 454 to 744 1 to 291       291/291
(100 %)
2 diff
(99.4 %id)
AK303265 thymus .j 1 to 915 1 to 915 K39R tiling clone,   915/915
(100 %)
1 diff
(99.9 %id)
DC407363 thymus .j 1 to 562 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
BM847386 myeloma .k 1 to 504 7 to 510 Q107H tiling clone,   510/510
(100 %)
1 diff
(99.9 %id)
BE018738 cervix .k 79 to 617 1 to 539       539/539
(100 %)
0 diff
(100 %id)
DA581038 lung .k 111 to 900 2 to 789   capped   788/791
(99 %)
9 diff
(98.9 %id)
BI754734 brain .k 163 to 987 1 to 841       841/841
(100 %)
35 diff
(95.9 %id)
TI_57217435   .k 164 to 987 35 to 874       840/874
(96 %)
28 diff
(96.8 %id)
BG402914 bladder, transitional cell papilloma, cell line .k 204 to 892 1 to 689   tiling clone,   689/689
(100 %)
2 diff
(99.8 %id)
BI822509 pooled brain, lung, testis .k 372 to 1198 1 to 825   available from MGC,   825/825
(100 %)
9 diff
(99.0 %id)
TI_57198103   .k 372 to 1198 69 to 893       825/893
(92 %)
14 diff
(98.5 %id)
BC035888 Brain, Lung, Testis, adult, pooled whole .k 373 to 2095 1 to 1723   tiling clone, available from MGC, AAA   1723/1723
(100 %)
0 diff
(100 %id)
BE562464 endometrium, adenocarcinoma cell line, uterus .k 389 to 1098 1 to 708       708/709
(99 %)
4 diff
(99.5 %id)
T95399 liver and spleen .k 393 to 752 1 to 371       371/373
(99 %)
20 diff
(94.7 %id)
T95315 liver and spleen .k 978 to 1343 377 to 8       370/377
(98 %)
0 diff
(100 %id)
DB319123 lung .k 1594 to 2095 499 to 1       499/570
(87 %)
20 diff
(96.5 %id)
BU598477 mixed (pool of 40 RNAs) .l 1 to 578 1 to 585 C160G Y171L E172* tiling clone,   585/944
(61 %)
14 diff
(98.6 %id)
R69052 placenta .l 11 to 402 1 to 398       398/401
(99 %)
15 diff
(96.3 %id)
R27072 placenta .l 12 to 322 1 to 316       316/319
(99 %)
16 diff
(95.0 %id)
R26843 placenta .l 559 to 1013 477 to 5   tiling clone,   473/490
(96 %)
0 diff
(100 %id)
CN369136 embryonic stem cells, cell lines H1, H7, andH9 .m 1 to 560 1 to 560   tiling clone,   560/560
(100 %)
3 diff
(99.5 %id)
DA039696 bladder .m 31 to 616 2 to 587 exact tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
DB133716 thymus .m 51 to 594 2 to 546 A2L capped   545/545
(100 %)
1 diff
(99.9 %id)
AK027352 whole embryo, mainly body .n-u 1 to 1405 1 to 1405 exact tiling clone, available from FLJ,   1405/1405
(100 %)
0 diff
(100 %id)
DA572497 whole embryo, mainly body .n-u 2 to 824 2 to 823   capped   822/824
(99 %)
12 diff
(98.6 %id)
AA078686 thymus .n-u 596 to 753 158 to 1       158/158
(100 %)
0 diff
(100 %id)
CR746639 pooled colon, kidney, stomach .n-u 729 to 1246 1 to 518       518/518
(100 %)
0 diff
(100 %id)
DB359532 whole embryo, mainly body .n-u 854 to 1405 546 to 1       546/546
(100 %)
14 diff
(97.5 %id)
BM785863 Ascites, stomach .o 1 to 577 4 to 583   tiling clone,   583/583
(100 %)
4 diff
(99.4 %id)
TI_57182184   .o 10 to 612 36 to 641   tiling clone,   606/641
(94 %)
7 diff
(99.0 %id)
AL549843 placenta, Placenta Cot 25-normalized .o 14 to 745 1 to 734       734/926
(79 %)
15 diff
(98.4 %id)
BI823218 pooled brain, lung, testis .o 22 to 566 1 to 562       562/915
(61 %)
26 diff
(97.2 %id)
DR004525 placenta .o 35 to 713 1 to 682       682/682
(100 %)
7 diff
(99.0 %id)
BM924798 pooled colon, kidney, stomach .o 378 to 1309 7 to 943   tiling clone,   937/1126
(83 %)
14 diff
(98.8 %id)
CD674062 eye, lens .o 390 to 791 1 to 402   tiling clone,   402/402
(100 %)
0 diff
(100 %id)
T52098 placenta .o 409 to 633 1 to 227       227/227
(100 %)
4 diff
(98.3 %id)
AW956958   .o 444 to 997 1 to 555       555/555
(100 %)
30 diff
(94.6 %id)
DB053264 testis .o 1181 to 1749 2 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
AA155762 Pancreas .p 1 to 298 1 to 299       299/496
(60 %)
5 diff
(99.0 %id)
TI_57149331   .p 1 to 718 27 to 744 D2H F118L tiling clone,   718/744
(96 %)
10 diff
(98.7 %id)
BI761527 pooled colon, kidney, stomach .p 4 to 718 1 to 715 D2H F118L available from MGC,   715/715
(100 %)
4 diff
(99.5 %id)
CB156055 Liver .p 14 to 671 1 to 658 exact tiling clone,   658/658
(100 %)
0 diff
(100 %id)
AA155763 Pancreas .p 544 to 902 364 to 4   tiling clone,   361/371
(97 %)
0 diff
(100 %id)
BX537669 human uterus .q-u 1 to 5719 1 to 5722 L42F R43E Q44T S45E L46S ... tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 5722/5722
(100 %)
11 diff
(99.9 %id)
DA961988 Spleen .r 1 to 549 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
AW890017 nervous_tumor .r 388 to 870 494 to 11 H5S Q6S E7G T8N L9Y ... tiling clone,   484/494
(97 %)
7 diff
(98.6 %id)
AW385729 leiomios .s 1 to 645 19 to 663 A21V H87Q tiling clone,   645/667
(96 %)
24 diff
(96.5 %id)
DA629702 Kidney .t 1 to 557 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
AB209640 Spleen .t 543 to 6311 1 to 5770 S230T tiling clone,   5770/5770
(100 %)
7 diff
(99.9 %id)
AA775982 schizophrenic brain S-11 frontal lobe .t 1513 to 1706 116 to 309   tiling clone, Submitted on the opposite strand 194/309
(62 %)
6 diff
(98.1 %id)
CN285288 embryonic stem cells, cell lines H1, H7, andH9 .t 1676 to 1923 1 to 248       248/248
(100 %)
2 diff
(99.2 %id)
AA255674 germinal center B cell .t 2343 to 2862 1 to 521       521/521
(100 %)
1 diff
(99.9 %id)
BG116917 duodenal adenocarcinoma, cell line, small intestine .t 2399 to 3088 1 to 691   tiling clone,   691/823
(83 %)
5 diff
(99.4 %id)
H73030 liver and spleen .t 2422 to 2829 1 to 413       413/414
(99 %)
9 diff
(97.9 %id)
BF361817 nervous_normal .t 2803 to 3142 1 to 336       336/336
(100 %)
8 diff
(97.7 %id)
AW971636   .t 3196 to 3738 543 to 1     Submitted on the opposite strand 543/546
(99 %)
1 diff
(99.9 %id)
AA262581 germinal center B cell .t 3304 to 3739 436 to 1       436/436
(100 %)
1 diff
(99.8 %id)
H77920 liver and spleen .t 3310 to 3734 429 to 1       429/432
(99 %)
9 diff
(98.0 %id)
AW967932   .t 3330 to 3738 409 to 1     Submitted on the opposite strand 409/409
(100 %)
6 diff
(98.6 %id)
AI479768 anaplastic oligodendroglioma, brain .t 3492 to 3774 283 to 1       283/451
(62 %)
0 diff
(100 %id)
AA810033 germinal center B cell .t 3498 to 3744 247 to 1       247/247
(100 %)
0 diff
(100 %id)
DB144059 thymus .t 4179 to 4715 2 to 540   capped   539/539
(100 %)
2 diff
(99.7 %id)
DA131887 alzheimer cortex .t 5850 to 6369 2 to 519   tiling clone, capped   518/518
(100 %)
2 diff
(99.7 %id)
AV739901 cord Blood .t 6002 to 6552 546 to 6     Submitted on the opposite strand 541/546
(99 %)
0 diff
(100 %id)
AI053623 ovary, papillary serous carcinoma .t 6006 to 6544 1 to 538   tiling clone, Submitted on the opposite strand 538/538
(100 %)
2 diff
(99.7 %id)
BE139156 ovary, papillary serous carcinoma .t 6066 to 6598 562 to 31       532/562
(94 %)
0 diff
(100 %id)
AI590269 bone marrow, CD34+, T negative, patient with chronicmyelogenous leukemia .t 6094 to 6598 509 to 6       504/509
(99 %)
0 diff
(100 %id)
AW302685 ovary, papillary serous carcinoma .t 6120 to 6598 494 to 16       479/494
(96 %)
0 diff
(100 %id)
AW302751 ovary, papillary serous carcinoma .t 6153 to 6598 464 to 16       449/464
(96 %)
0 diff
(100 %id)
BE049209 ovary, papillary serous carcinoma .t 6181 to 6598 431 to 16       416/431
(96 %)
0 diff
(100 %id)
CD671883 eye, Iris .t 6182 to 6837 1 to 656       656/656
(100 %)
0 diff
(100 %id)
R76764 placenta .t 6183 to 6528 1 to 350       350/350
(100 %)
13 diff
(96.3 %id)
AW268331 ovary, papillary serous carcinoma .t 6193 to 6598 424 to 16       409/424
(96 %)
0 diff
(100 %id)
BQ421870 embryonal carcinoma, cell line, testis .t 6198 to 7061 1 to 869       869/869
(100 %)
8 diff
(99.1 %id)
BE139373 ovary, papillary serous carcinoma .t 6208 to 6598 395 to 5       391/395
(98 %)
0 diff
(100 %id)
AI144046 ovary, papillary serous carcinoma .t 6211 to 6598 403 to 17       387/403
(96 %)
0 diff
(100 %id)
BQ437727 melanotic melanoma, skin .t 6275 to 7091 17 to 832       816/835
(97 %)
12 diff
(98.6 %id)
AA279807.
matches multiple genes
germinal center B cell .t 6294 to 6648 378 to 23     Submitted on the opposite strand, also hits gene AP3D1andMOBKL2A 356/378
(94 %)
0 diff
(100 %id)
BQ228729 embryonal carcinoma, cell line, testis .t 6299 to 7205 1 to 914   tiling clone,   914/915
(99 %)
18 diff
(98.1 %id)
AW302042 ovary, papillary serous carcinoma .t 6301 to 6598 310 to 16       295/315
(93 %)
0 diff
(100 %id)
AW301802 ovary, papillary serous carcinoma .t 6301 to 6598 299 to 5       295/305
(96 %)
0 diff
(100 %id)
AW302114 ovary, papillary serous carcinoma .t 6306 to 6598 301 to 5       297/301
(98 %)
0 diff
(100 %id)
H25878 breast .t 6311 to 6725 1 to 423       423/439
(96 %)
18 diff
(95.9 %id)
BG387557 embryonal carcinoma, cell line, testis .t 6336 to 7056 1 to 713       713/987
(72 %)
20 diff
(98.0 %id)
AW271038 ovary, papillary serous carcinoma .t 6338 to 6598 261 to 5       257/273
(94 %)
0 diff
(100 %id)
CN257694 embryonic stem cells, DMSO-treated H9 cellline .t 6339 to 7099 1 to 760       760/765
(99 %)
4 diff
(99.5 %id)
EL951063 eyeball .t 6355 to 6821 1 to 466       466/466
(100 %)
4 diff
(99.2 %id)
BM706378 eye, lens .t 6363 to 6932 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
BF911411 uterus_tumor .t 6364 to 6779 18 to 432       415/437
(94 %)
6 diff
(98.7 %id)
AW272040 ovary, papillary serous carcinoma .t 6391 to 6598 236 to 28       209/236
(88 %)
0 diff
(100 %id)
BF034148 adenocarcinoma, ovary .t 6392 to 7143 1 to 762       762/800
(95 %)
70 diff
(91.3 %id)
BM700944 eye, human retina .t 6403 to 6786 12 to 395   fully sequenced, Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 384/395
(97 %)
5 diff
(98.8 %id)
BM703183 eye, human retina .t 6403 to 6754 4 to 355   fully sequenced, Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 352/355
(99 %)
5 diff
(98.6 %id)
W39597 parathyroid gland, parathyroid tumor .t 6404 to 6759 1 to 368     Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 368/422
(87 %)
17 diff
(96.0 %id)
AA600192 lung, lung carcinoma .t 6421 to 6737 1 to 317     Submitted on the opposite strand 317/317
(100 %)
1 diff
(99.7 %id)
BM818044 stomach .t 6440 to 7140 1 to 701       701/701
(100 %)
2 diff
(99.8 %id)
TI_151711821   .t 6462 to 7142 772 to 92   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 681/681
(100 %)
13 diff
(98.1 %id)
BM707755 eye, RPE and Choroid .t 6479 to 6956 1 to 478     Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 478/478
(100 %)
5 diff
(99.0 %id)
BF028212 bladder, carcinoma, cell line .t 6491 to 7073 1 to 579       579/865
(66 %)
9 diff
(99.0 %id)
BU594772 mixed (pool of 40 RNAs) .t 6492 to 7117 1 to 626       626/630
(99 %)
2 diff
(99.7 %id)
BG505420 embryonal carcinoma, testis .t 6510 to 7401 1 to 893       893/907
(98 %)
46 diff
(95.0 %id)
BF092648 testis_normal .t 6523 to 6791 275 to 6       270/275
(98 %)
0 diff
(100 %id)
AA291930 ovarian tumor, ovary .t 6532 to 6880 1 to 349   fully sequenced,   349/349
(100 %)
2 diff
(99.5 %id)
AA480083 ovarian tumor, ovary .t 6532 to 7073 1 to 542       542/542
(100 %)
4 diff
(99.3 %id)
AW368706 head_neck .t 6537 to 6829 1 to 293       293/293
(100 %)
1 diff
(99.7 %id)
CR736947 germinal center B cell .t 6548 to 7212 1 to 666       666/666
(100 %)
2 diff
(99.7 %id)
AI000159 breast .t 6554 to 6696 1 to 142     Submitted on the opposite strand 142/142
(100 %)
2 diff
(98.6 %id)
BF880106 lung_tumor .t 6583 to 7077 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
AA233233 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .t 6583 to 7006 1 to 424       424/424
(100 %)
0 diff
(100 %id)
AA481588 germinal center B cell .t 6595 to 6962 1 to 367   fully sequenced, Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 367/367
(100 %)
1 diff
(99.8 %id)
CF456154 peripheral nervous system .t 6603 to 7361 32 to 789       758/789
(96 %)
8 diff
(99.0 %id)
T50024 placenta .t 6621 to 7051 1 to 437   fully sequenced,   437/437
(100 %)
16 diff
(96.4 %id)
CV379884 marrow .t 6649 to 6959 315 to 7     Submitted on the opposite strand 309/315
(98 %)
8 diff
(97.5 %id)
BQ925010 sciatic nerve .t 6651 to 7434 1 to 786       786/968
(81 %)
9 diff
(99.1 %id)
TI_154062716   .t 6651 to 7433 863 to 89   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 775/968
(80 %)
10 diff
(99.0 %id)
BM741000 Ascites, stomach .t 6657 to 7244 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
BM741098 Ascites, stomach .t 6657 to 7243 1 to 587       587/587
(100 %)
0 diff
(100 %id)
BM741121 Ascites, stomach .t 6657 to 7116 1 to 460       460/460
(100 %)
4 diff
(99.2 %id)
TI_149309821   .t 6661 to 7433 851 to 87   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 765/927
(82 %)
9 diff
(99.1 %id)
AA215319 germinal center B cell .t 6663 to 7119 1 to 461       461/461
(100 %)
6 diff
(98.7 %id)
AA279567 germinal center B cell .t 6671 to 7052 1 to 382       382/382
(100 %)
2 diff
(99.5 %id)
BU621176 cell lines, Chondrosarcoma .t 6686 to 7433 763 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 745/748
(99 %)
5 diff
(99.4 %id)
BM664681 eye, human retina .t 6724 to 7142 437 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 419/419
(100 %)
0 diff
(100 %id)
BQ016282 lung, Metastatic Chondrosarcoma .t 6738 to 7433 713 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 695/695
(100 %)
1 diff
(99.9 %id)
BM672289 eye, human retina .t 6756 to 7142 405 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 387/387
(100 %)
1 diff
(99.8 %id)
AW838634 leiomios .t 6760 to 7078 1 to 319       319/319
(100 %)
6 diff
(98.2 %id)
AW608173 leiomios .t 6761 to 7315 555 to 1       555/555
(100 %)
4 diff
(99.3 %id)
BU621082 cell lines, Chondrosarcoma .t 6765 to 7433 686 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 668/668
(100 %)
1 diff
(99.9 %id)
BU688186 lung .t 6766 to 7433 686 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 668/668
(100 %)
0 diff
(100 %id)
TI_57231394   .t 6787 to 7430 131 to 774   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 644/644
(100 %)
0 diff
(100 %id)
BI869374 adenocarcinoma, cell line, Liver .t 6788 to 7430 1 to 643   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 643/643
(100 %)
0 diff
(100 %id)
AW014445   .t 6793 to 7142 367 to 18   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 350/350
(100 %)
5 diff
(98.6 %id)
AA243486.
matches multiple genes
germinal center B cell .t 6804 to 7152 1 to 349     also hits gene WDR78 349/349
(100 %)
0 diff
(100 %id)
BQ447606 Knee, Osteoarthritic Cartilage .t 6805 to 7437 651 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 633/633
(100 %)
0 diff
(100 %id)
CA421223 Bone, Enchondroma cell line .t 6807 to 7433 645 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 627/627
(100 %)
0 diff
(100 %id)
BQ003216 Chondrosarcoma, Left Pelvis .t 6863 to 7430 586 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 568/568
(100 %)
1 diff
(99.9 %id)
AA291931 ovarian tumor, ovary .t 6869 to 7143 275 to 1   fully sequenced,   275/275
(100 %)
0 diff
(100 %id)
BU633295 cell lines, Chondrosarcoma .t 6869 to 7430 587 to 26   AAA   562/569
(98 %)
0 diff
(100 %id)
G28708   .t 6874 to 7434 560 to 3     Submitted on the opposite strand 558/560
(99 %)
0 diff
(100 %id)
N23013 melanocyte .t 6874 to 7434 560 to 3       558/560
(99 %)
0 diff
(100 %id)
AA779091 liver and spleen .t 6899 to 7433 535 to 1       535/535
(100 %)
0 diff
(100 %id)
CD672270 eye, Iris .t 6922 to 7433 1 to 512   fully sequenced, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 512/512
(100 %)
0 diff
(100 %id)
AA481283 germinal center B cell .t 6932 to 7433 545 to 44   fully sequenced, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 502/502
(100 %)
0 diff
(100 %id)
AI091407 pooled .t 6956 to 7437 482 to 1       482/482
(100 %)
1 diff
(99.8 %id)
AI342173 uterus .t 6956 to 7433 478 to 1       478/478
(100 %)
1 diff
(99.8 %id)
AI380767 B-cell, chronic lymphotic leukemia .t 6958 to 7434 477 to 1       477/477
(100 %)
0 diff
(100 %id)
AI817953 anaplastic oligodendroglioma, brain .t 6968 to 7437 497 to 1       497/497
(100 %)
37 diff
(92.6 %id)
BQ025491 placenta .t 6971 to 7437 485 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 467/473
(98 %)
0 diff
(100 %id)
BQ025544 placenta .t 6971 to 7437 485 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 467/473
(98 %)
0 diff
(100 %id)
BQ025840 placenta .t 6971 to 7437 485 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 467/473
(98 %)
11 diff
(97.7 %id)
AI161247 brain, glioblastoma (pooled) .t 6973 to 7434 464 to 3       462/464
(99 %)
0 diff
(100 %id)
AA775262 whole brain .t 6980 to 7433 464 to 11   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 454/454
(100 %)
2 diff
(99.6 %id)
AI620960 Prostate .t 6981 to 7437 456 to 1       456/456
(100 %)
1 diff
(99.8 %id)
BF057560 fibrotheoma, ovary .t 6984 to 7438 455 to 1   tiling clone,   455/455
(100 %)
0 diff
(100 %id)
AA243424.
matches multiple genes
germinal center B cell .t 6985 to 7433 448 to 1     also hits gene stoyglo 448/448
(100 %)
1 diff
(99.8 %id)
AA742296 germinal center B cell .t 6987 to 7433 457 to 12   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 446/446
(100 %)
1 diff
(99.8 %id)
AI360753 brain, glioblastoma (pooled) .t 6987 to 7434 450 to 3       448/450
(99 %)
0 diff
(100 %id)
AA009914.
matches multiple genes
heart .t 6988 to 7334 1 to 352     also hits gene MXI1 352/392
(89 %)
6 diff
(98.5 %id)
AI082407 breast .t 6988 to 7432 445 to 1       445/445
(100 %)
0 diff
(100 %id)
AW271412 Kidney .t 6988 to 7434 448 to 2       447/448
(99 %)
0 diff
(100 %id)
AA779083 liver and spleen .t 6990 to 7433 443 to 1       443/443
(100 %)
4 diff
(99.1 %id)
BE644921 pooled .t 6990 to 7438 455 to 7       449/455
(98 %)
0 diff
(100 %id)
AA233693 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .t 6994 to 7238 1 to 245   fully sequenced,   245/245
(100 %)
0 diff
(100 %id)
AI804165 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .t 6999 to 7437 458 to 20   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 439/439
(100 %)
5 diff
(98.9 %id)
AW838625 leiomios .t 7003 to 7399 397 to 1       397/397
(100 %)
0 diff
(100 %id)
BE185350 head_neck .t 7024 to 7195 174 to 3     Submitted on the opposite strand 172/174
(98 %)
0 diff
(100 %id)
AA670202 whole brain .t 7027 to 7433 415 to 9       407/415
(98 %)
0 diff
(100 %id)
AI032843 liver and spleen .t 7032 to 7434 405 to 4       402/405
(99 %)
0 diff
(100 %id)
AW768251 lymph node, lymphoma, follicular mixed small and largecell .t 7032 to 7434 403 to 1       403/403
(100 %)
0 diff
(100 %id)
W15432 parathyroid gland, parathyroid tumor .t 7034 to 7433 416 to 11   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 406/406
(100 %)
7 diff
(98.3 %id)
T50088 placenta .t 7038 to 7403 372 to 1   fully sequenced,   372/372
(100 %)
6 diff
(98.4 %id)
AW016884   .t 7048 to 7433 403 to 18   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 386/386
(100 %)
3 diff
(99.3 %id)
AA766578 germinal center B cell .t 7070 to 7432 375 to 13   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 363/363
(100 %)
2 diff
(99.5 %id)
AI097182 heart .t 7079 to 7434 356 to 1       356/356
(100 %)
0 diff
(100 %id)
AI246454 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .t 7079 to 7431 357 to 5       353/357
(98 %)
0 diff
(100 %id)
BG977894 colon_ins .t 7080 to 7415 1 to 337       337/340
(99 %)
6 diff
(98.3 %id)
BQ641700 eye, normal pigmented retinal epithelium .t 7085 to 7437 1 to 355   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 355/355
(100 %)
2 diff
(99.5 %id)
N33512.
matches multiple genes
melanocyte .t 7093 to 7433 343 to 1     also hits gene nohura 343/343
(100 %)
5 diff
(98.6 %id)
AA630743   .t 7095 to 7403 308 to 1       308/308
(100 %)
1 diff
(99.7 %id)
BM664246 eye, lens .t 7095 to 7430 356 to 21       336/356
(94 %)
0 diff
(100 %id)
BU733273 eye, RPE and Choroid .t 7100 to 7437 356 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 338/338
(100 %)
0 diff
(100 %id)
BG987649 head_neck .t 7115 to 7342 228 to 3       226/238
(94 %)
0 diff
(100 %id)
AA774648 heart .t 7119 to 7438 320 to 1       320/320
(100 %)
0 diff
(100 %id)
H25879 breast .t 7140 to 7423 287 to 1       287/287
(100 %)
3 diff
(99.0 %id)
AA233157 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .t 7161 to 7438 283 to 6       278/283
(98 %)
0 diff
(100 %id)
CD672269 eye, Iris .t 7162 to 7433 303 to 32   fully sequenced, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 272/272
(100 %)
0 diff
(100 %id)
BF475907 Prostate .t 7177 to 7434 258 to 1       258/258
(100 %)
0 diff
(100 %id)
AA233657 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .t 7208 to 7436 229 to 1   fully sequenced,   229/229
(100 %)
0 diff
(100 %id)
AA404548   .t 7224 to 7436 217 to 4       214/217
(98 %)
0 diff
(100 %id)
EC439654 Prostate .t 7328 to 7434 106 to 1       106/106
(100 %)
1 diff
(99.1 %id)
EC498429 Prostate .t 7328 to 7433 106 to 1       106/106
(100 %)
0 diff
(100 %id)
AK172816   .u 1 to 2109 5 to 2114 D203G tiling clone, available from FLJ, AAA   2114/2114
(100 %)
3 diff
(99.9 %id)
CB991721 placenta, pre-eclamptic placenta .va -8 to 733 23 to 775       753/783
(96 %)
24 diff
(97.0 %id)
CB993144 placenta, pre-eclamptic placenta .va -8 to 742 23 to 778   tiling clone,   756/780
(96 %)
12 diff
(98.5 %id)
DT220400 brain .va 1 to 671 5 to 674       674/674
(100 %)
2 diff
(99.8 %id)
DT220899 brain .va 1 to 641 5 to 645       645/645
(100 %)
1 diff
(99.9 %id)
DB009639 colon, tumor tissue .va 2 to 553 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BM836375 myeloma .va 8 to 387 1 to 380       380/380
(100 %)
1 diff
(99.8 %id)
BC048333 Colon, Kidney, Stomach, adult, whole pooled .va 23 to 1648 1 to 1626   tiling clone, available from MGC, AAA   1626/1626
(100 %)
0 diff
(100 %id)
DA713264   .vb-u 1 to 520 2 to 521 exact tiling clone, capped   520/520
(100 %)
0 diff
(100 %id)
DB156623 thymus .vb-u 88 to 684 2 to 598 exact tiling clone, capped   597/597
(100 %)
1 diff
(99.9 %id)
AW502916 lymph .vb-u 102 to 545 7 to 450 exact     444/450
(98 %)
6 diff
(98.7 %id)
CF144265 lymph .vb-u 102 to 235 7 to 140       134/140
(95 %)
6 diff
(95.8 %id)
TI_154158637   .vb-u 102 to 693 79 to 672 exact tiling clone,   594/596
(99 %)
13 diff
(97.9 %id)
DA841177 placenta .vc 1 to 560 2 to 562 A27P tiling clone, capped   561/561
(100 %)
2 diff
(99.7 %id)
DB222115 trachea .vc 6 to 553 2 to 549   tiling clone, capped   548/548
(100 %)
1 diff
(99.9 %id)
DA626625 Kidney .vd 1 to 543 2 to 544 exact tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
CB142336 Liver .ve 1 to 391 1 to 391 exact tiling clone,   391/391
(100 %)
0 diff
(100 %id)
TI_59379763   Gene TMEM139andCASP2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p, .q-u, .r, .s, .t, .u, .va, .vb-u, .vc, .vd, .ve Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI